mRNA_C-tenellus_contig10115.2.2 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig10115.2.2
Unique NamemRNA_C-tenellus_contig10115.2.2
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig10115.2.2 vs. uniprot
Match: A0A6H5KLW9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLW9_9PHAE)

HSP 1 Score: 407 bits (1045), Expect = 1.910e-135
Identity = 184/226 (81.42%), Postives = 210/226 (92.92%), Query Frame = 2
Query:  233 DWEDWDPSQGNFLHHMVAGSIAGITEHTVMFPVDTLKTYVQCMHECPERVAGQRVLEMVRGQGMLRLWRGVGTMFTGCVPAHALYFSVFEYCKDNLGVNRPGHHPAGAAIAGACATIFHDAVMTPMDVIKQRLQLGYHRGILDCIQTVRQTEGLEAFYRSFPITLFMNIPYGCVMVAVNESIKQTLQPGGEFDTQTYMIAGSGAGAVAAFSTTPLDVVKTRLQTQA 910
            DWEDWDPSQGNFLHHMVAGSIAGITEHTVM+PVDT KTYVQCM ECPE VAG+RV+EMVRGQGMLRLWRGVGTMFTGCVPAHALYFSV E CKD LGVN+PGH PAGAA+AGA AT+FHDAVMTPMDV+KQRLQLGYH+G+LDC+ T+++TEG +AFYRSFP TLFMNIPYGCVMVAVNES+K+ ++P G++D +T+++AGSGAGA+AA +T PLDVVKTRLQTQA
Sbjct:   17 DWEDWDPSQGNFLHHMVAGSIAGITEHTVMYPVDTFKTYVQCMRECPEAVAGRRVMEMVRGQGMLRLWRGVGTMFTGCVPAHALYFSVLENCKDRLGVNQPGHQPAGAAVAGAAATVFHDAVMTPMDVVKQRLQLGYHKGMLDCVLTIQRTEGTQAFYRSFPTTLFMNIPYGCVMVAVNESLKRVMRPAGDYDAKTFLLAGSGAGAIAAVATNPLDVVKTRLQTQA 242          
BLAST of mRNA_C-tenellus_contig10115.2.2 vs. uniprot
Match: A0A835YZ17_9STRA (Mitoferrin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ17_9STRA)

HSP 1 Score: 370 bits (951), Expect = 3.920e-120
Identity = 200/324 (61.73%), Postives = 228/324 (70.37%), Query Frame = 2
Query:  233 DWEDWDPSQGNFLHHMVAGSIAGITEHTVMFPVDTLKTYVQCMHECPERVAGQRVLEMVRGQGMLRLWRGVGTMFTGCVPAHALYFSVFEYCKDNLGVNRPGHHPAGAAIAGACATIFHDAVMTPMDVIKQRLQLGYHRGILDCIQTVRQTEGLEAFYRSFPITLFMNIPYGCVMVAVNESIKQTLQPGGEFDTQTYMIAGSGAGAVAAFSTTPLDVVKTRLQTQAAPAVVYYHH--PSHQSGSEGAKAGPRRGFSWAKQFWGGSGQGQGMSQGGIVLQGTAM--------HS-AATRCTKGHCGAEQPQVVLRYQGLLDAVSK 1171
            DWEDW   +GNF+HHM+AGSIAGITEHTVMFPVDT+KT++QCM ECPER AG RVLEMVRGQGMLRLWRGVGTMF GCVPAHA YFSV E  K   G N  GH P  AA AG  AT+FHDA MTPMDVIKQRLQLGY+RGI DC++T+ +TEG  A YRSFP TLFMNIPYG VMVA NES+K  L+P G+  T T+M AG GAGAVAA +TTPLDVVKTRLQTQA        H  P+  SG+   K     G              +G+ QGG    G A+        HS AA RC KG CG E+P+V L+Y+GL+DAV +
Sbjct:   13 DWEDWS-GEGNFVHHMLAGSIAGITEHTVMFPVDTIKTHIQCMRECPERQAGARVLEMVRGQGMLRLWRGVGTMFMGCVPAHAAYFSVLEASKSRFGANAGGHKPVAAAAAGGLATVFHDAFMTPMDVIKQRLQLGYYRGIGDCVRTIVRTEGARALYRSFPTTLFMNIPYGAVMVAANESLKTALRPRGDHTTATFMAAGCGAGAVAAAATTPLDVVKTRLQTQALLTAAGRAHAAPAAHSGNGLGKLPVLLG--------------RGLRQGGAGAGGGAVAAAMPAVFHSNAAGRCAKG-CG-EKPEVPLQYRGLVDAVRQ 319          
BLAST of mRNA_C-tenellus_contig10115.2.2 vs. uniprot
Match: A0A835Z185_9STRA (Mitoferrin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z185_9STRA)

HSP 1 Score: 366 bits (940), Expect = 1.880e-118
Identity = 191/322 (59.32%), Postives = 226/322 (70.19%), Query Frame = 2
Query:  233 DWEDWDPSQGNFLHHMVAGSIAGITEHTVMFPVDTLKTYVQCMHECPERVAGQRVLEMVRGQGMLRLWRGVGTMFTGCVPAHALYFSVFEYCKDNLGVNRPGHHPAGAAIAGACATIFHDAVMTPMDVIKQRLQLGYHRGILDCIQTVRQTEGLEAFYRSFPITLFMNIPYGCVMVAVNESIKQTLQPGGEFDTQTYMIAGSGAGAVAAFSTTPLDVVKTRLQTQAAPAVVYYHHPSHQSGSEGAKAGPRRGFSWAKQFWGGSGQGQGMSQGG--------IVLQGTAMHS-AATRCTKGHCGAEQPQVVLRYQGLLDAVSK 1171
            DWEDW   +GNF+HHM+AGSIAG+TEHTVMFPVDTLKT++QCM ECPER AG RVLEMVRGQGMLRLWRGVGTMF GCVPAHA YFS+ E CK+  G N  GH P  AA AG  AT+FHDAVMTPMDVIKQRLQLGY+RGI DC++T+ + EG+ A YRSFP TLFMNIPYG +MVA NES+K  L+P G+  T TYM+AG GAGAVAA +TTPLDVVKT LQTQA  A     H +  + +  A             F G +    G+ +          + L     HS AA RC +G CG E+P+V L+Y+G +DA  +
Sbjct:   13 DWEDWS-GEGNFVHHMLAGSIAGVTEHTVMFPVDTLKTHIQCMRECPERQAGSRVLEMVRGQGMLRLWRGVGTMFVGCVPAHAAYFSILELCKERFGANGGGHAPVAAAAAGVFATVFHDAVMTPMDVIKQRLQLGYYRGIGDCVRTIARAEGVGALYRSFPTTLFMNIPYGAIMVAANESLKTALRPRGDHTTATYMLAGCGAGAVAAAATTPLDVVKTMLQTQAIHA-----HATRYAAAAAAPHVAAPAXXXXPIFAGTALASSGLLRRACAAPAGATVALMPAVFHSNAAARCIQG-CG-EKPEVKLQYRGFVDAARE 326          
BLAST of mRNA_C-tenellus_contig10115.2.2 vs. uniprot
Match: A0A7S3Y5R4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5R4_HETAK)

HSP 1 Score: 314 bits (804), Expect = 1.630e-98
Identity = 146/234 (62.39%), Postives = 180/234 (76.92%), Query Frame = 2
Query:  233 DWEDWDPSQGNFLHHMVAGSIAGITEHTVMFPVDTLKTYVQC---MHECPERVAGQR--VLEMVRGQGMLRLWRGVGTMFTGCVPAHALYFSVFEYCKDNLGVNRPGHHPAGAAIAGACATIFHDAVMTPMDVIKQRLQLGYHRGILDCIQTVRQTEGLEAFYRSFPITLFMNIPYGCVMVAVNESIKQTLQPGGEFDTQTYMIAGSGAGAVAAFSTTPLDVVKTRLQTQAAPA 919
            +WEDWDP +G+F  HMVAGS AG+ EH  M+P+DTLKT+VQC     EC  R   +    ++ ++ QGMLRLWRGV TM  GC+PAHA YFSV E CK++ GVNRPGHHP  AA  GA A++FHD +MTP+DV+KQRLQLGY+RGI DC +TV +TEG +AF+ S PITL MNIPYGC+MVA NES+K+ L+PGG++D  T+M AG+GAGA A+  TTPLDVVKTRLQ Q A A
Sbjct:   11 EWEDWDPEKGSFAVHMVAGSCAGVVEHCSMYPIDTLKTHVQCHKPRQECSSRFICRSFSAIDFIQKQGMLRLWRGVNTMILGCIPAHAAYFSVVELCKESFGVNRPGHHPLAAAATGAIASVFHDGIMTPLDVVKQRLQLGYYRGIRDCARTVYRTEGAQAFFVSLPITLAMNIPYGCIMVATNESLKRVLRPGGDYDLGTHMAAGTGAGAAASLVTTPLDVVKTRLQVQRATA 244          
BLAST of mRNA_C-tenellus_contig10115.2.2 vs. uniprot
Match: A0A7S3Y5E3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5E3_HETAK)

HSP 1 Score: 312 bits (799), Expect = 3.870e-98
Identity = 144/230 (62.61%), Postives = 178/230 (77.39%), Query Frame = 2
Query:  233 DWEDWDPSQGNFLHHMVAGSIAGITEHTVMFPVDTLKTYVQC---MHECPERVAGQR--VLEMVRGQGMLRLWRGVGTMFTGCVPAHALYFSVFEYCKDNLGVNRPGHHPAGAAIAGACATIFHDAVMTPMDVIKQRLQLGYHRGILDCIQTVRQTEGLEAFYRSFPITLFMNIPYGCVMVAVNESIKQTLQPGGEFDTQTYMIAGSGAGAVAAFSTTPLDVVKTRLQTQ 907
            +WEDWDP +G+F  HMVAGS AG+ EH  M+P+DTLKT+VQC     EC  R   +    ++ ++ QGMLRLWRGV TM  GC+PAHA YFSV E CK++ GVNRPGHHP  AA  GA A++FHD +MTP+DV+KQRLQLGY+RGI DC +TV +TEG +AF+ S PITL MNIPYGC+MVA NES+K+ L+PGG++D  T+M AG+GAGA A+  TTPLDVVKTRLQ Q
Sbjct:   11 EWEDWDPEKGSFAVHMVAGSCAGVVEHCSMYPIDTLKTHVQCHKPRQECSSRFICRSFSAIDFIQKQGMLRLWRGVNTMILGCIPAHAAYFSVVELCKESFGVNRPGHHPLAAAATGAIASVFHDGIMTPLDVVKQRLQLGYYRGIRDCARTVYRTEGAQAFFVSLPITLAMNIPYGCIMVATNESLKRVLRPGGDYDLGTHMAAGTGAGAAASLVTTPLDVVKTRLQKQ 240          
BLAST of mRNA_C-tenellus_contig10115.2.2 vs. uniprot
Match: W7U8D3_9STRA (Mitoferrin-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U8D3_9STRA)

HSP 1 Score: 286 bits (733), Expect = 2.280e-86
Identity = 144/264 (54.55%), Postives = 181/264 (68.56%), Query Frame = 2
Query:  233 DWEDWDPSQGNFLHHMVAGSIAGITEHTVMFPVDTLKTYVQCMHECP-------------------------ERVA-GQRVLE-------------MVRGQGMLRLWRGVGTMFTGCVPAHALYFSVFEYCKDNLGVNRPGHHPAGAAIAGACATIFHDAVMTPMDVIKQRLQLGYHRGILDCIQTVRQTEGLEAFYRSFPITLFMNIPYGCVMVAVNESIKQTLQPGGEFDTQTYMIAGSGAGAVAAFSTTPLDVVKTRLQTQ 907
            DWEDWDP  G+F+HHM+AGSIAGI EHT+M+PVDT+KT++QC  EC                          E  A G  V+E             +V+ +G LRLWRGV TM + CVPAHA YFS  E CK+  GVN   H+  GAA AGA AT+FHD++MTPMDVIKQRLQLGY++G+  C  ++ + EG+ AFY S P+TLFMN+PYG VMVA NESIK+ L+P G++ T TY++AGSGAGA+AA +TTPLD++KTRLQTQ
Sbjct:   31 DWEDWDPKTGSFVHHMIAGSIAGIAEHTLMYPVDTIKTFMQCQ-ECSLTANCLKQRTVVAAAAAVSGREGLGEAAARGASVVEGSVGLTSFEAAFRLVQKEGTLRLWRGVSTMLSACVPAHAAYFSALESCKERFGVNGREHNVMGAAAAGAVATLFHDSIMTPMDVIKQRLQLGYYKGLAHCAVSIVRQEGVRAFYLSLPVTLFMNLPYGGVMVAANESIKRLLKPAGDYTTGTYLLAGSGAGALAAAATTPLDLIKTRLQTQ 293          
BLAST of mRNA_C-tenellus_contig10115.2.2 vs. uniprot
Match: A0A7S2RU47_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RU47_9STRA)

HSP 1 Score: 261 bits (667), Expect = 1.010e-79
Identity = 127/226 (56.19%), Postives = 156/226 (69.03%), Query Frame = 2
Query:  233 DWEDWDPSQGN-FLHHMVAGSIAGITEHTVMFPVDTLKTYVQCMHECPERVAGQRVLEMVRGQGMLRLWRGVGTMFTGCVPAHALYFSVFEYCKDNLGVNRPGHHPAGAAIAGACATIFHDAVMTPMDVIKQRLQLGYHRGILDCIQTVRQTEGLEAFYRSFPITLFMNIPYGCVMVAVNESIKQTLQPGGEFDTQTYMIAGSGAGAVAAFSTTPLDVVKTRLQTQ 907
            +WE+WDP  G  F  H +AGS AG  EH  +FP DT+KT++Q      E  +   +  +VR +GM RLWRGV TMFT CVPAHA YFS+FE  K   G N  GHHP  AA +GA ATI HD++MTPMDV+KQRLQLG++ G+ DC  ++ +TEG  AF+ SFP TLFMNIPY  +MVA NES K+ L P  E++   + I+G  AGAVAA  T PLDVVKTRLQTQ
Sbjct:   10 EWEEWDPESGTTFFVHAMAGSCAGAAEHCAIFPFDTIKTHMQA-----EGASSSSIRSLVRQEGMFRLWRGVSTMFTACVPAHAAYFSLFEQSKIYFGANEEGHHPVAAAASGAIATIAHDSIMTPMDVVKQRLQLGFYNGMSDCFWSIVRTEGAGAFFLSFPTTLFMNIPYAGIMVASNESFKKVLNPTNEYNLPVFFISGGMAGAVAAAFTNPLDVVKTRLQTQ 230          
BLAST of mRNA_C-tenellus_contig10115.2.2 vs. uniprot
Match: D7G8Z1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Z1_ECTSI)

HSP 1 Score: 255 bits (652), Expect = 3.570e-77
Identity = 127/221 (57.47%), Postives = 158/221 (71.49%), Query Frame = 2
Query:  509 KDNLGVNRPGHHPAGAAIAGACATIFHDAVMTPMDVIKQRLQLGYHRGILDCIQTVRQTEGLEAFYRSFPITLFMNIPYGCVMVAVNESIKQTLQPGGEFDTQTYMIAGSGAGAVAAFSTTPLDVVKTRLQTQAAPAVVYYHHPSHQSGSEGAKAGPRRGFSWAKQFWGGSGQGQGMSQGGIVLQGTAMHSAATRCTKGHCGAEQPQVVLRYQGLLDAVSK 1171
            +D LGVN+PGH P GAA+AGA AT+FHDAVMTPMDV+KQRLQLGYH+G+LDC+ T+++TEG +AFYRSFP TLFMNIPYGCVMVAVNES+K  ++P G++DT+T+++AGSGAGAVAA +T PLDVVKTRLQTQA              G+    A    GF+  K+                   GT +HSAA RC  G CGA++P V L+YQGL+DAV +
Sbjct:   13 QDRLGVNQPGHQPTGAAVAGAAATVFHDAVMTPMDVVKQRLQLGYHKGMLDCVLTIQRTEGTQAFYRSFPTTLFMNIPYGCVMVAVNESLKHVMRPAGDYDTKTFLLAGSGAGAVAAVATNPLDVVKTRLQTQAF------------RGAAAPLAARSEGFAAPKEG----------------ATGTGLHSAAARCATGRCGADKPVVTLQYQGLVDAVRQ 205          
BLAST of mRNA_C-tenellus_contig10115.2.2 vs. uniprot
Match: A0A024GCU6_9STRA (Uncharacterized protein n=2 Tax=Albugo TaxID=65356 RepID=A0A024GCU6_9STRA)

HSP 1 Score: 257 bits (656), Expect = 2.590e-76
Identity = 120/231 (51.95%), Postives = 161/231 (69.70%), Query Frame = 2
Query:  233 DWEDWDPSQGNFLHHMVAGSIAGITEHTVMFPVDTLKTYVQCMHEC------PERVAGQRVLEMVRGQGMLRLWRGVGTMFTGCVPAHALYFSVFEYCKDNLGVNRPGHHPAGAAIAGACATIFHDAVMTPMDVIKQRLQLGYHRGILDCIQTVRQTEGLEAFYRSFPITLFMNIPYGCVMVAVNESIKQTLQPGGEFDTQTYMIAGSGAGAVAAFSTTPLDVVKTRLQTQ 907
            DWE+W P +G+FLHHM+AGS AG+ EH  +FP+DT+KT++QC  +C       +  A + +  +++ +G LRL+RGV TM    +PAHALYFS+FEY K   G NR    P  +  AG C TI HD +MTPMD++KQRLQLGY+ G+ +C++T+ +TEGL AFY SFP TL MN+PY  +MV+ NES K+ L P GE +   Y+ +G+ AGA+A   T PLDV KTRLQTQ
Sbjct:   30 DWEEWSPEKGSFLHHMMAGSAAGVAEHVSIFPIDTIKTHMQC-EQCHWSGSSSKSSALETLRRLLKEEGPLRLFRGVSTMLGASLPAHALYFSIFEYAKRTFGANRAEPTPFASGAAGVCGTICHDLIMTPMDLVKQRLQLGYYSGVWNCMKTITRTEGLRAFYISFPTTLLMNLPYSMIMVSANESFKKMLNPTGEMNVIAYLSSGAAAGALAGALTNPLDVAKTRLQTQ 259          
BLAST of mRNA_C-tenellus_contig10115.2.2 vs. uniprot
Match: W4H6D4_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H6D4_9STRA)

HSP 1 Score: 255 bits (651), Expect = 4.410e-76
Identity = 121/230 (52.61%), Postives = 155/230 (67.39%), Query Frame = 2
Query:  233 DWEDWDPSQGNFLHHMVAGSIAGITEHTVMFPVDTLKTYVQCMHEC-----PERVAGQRVLEMVRGQGMLRLWRGVGTMFTGCVPAHALYFSVFEYCKDNLGVNRPGHHPAGAAIAGACATIFHDAVMTPMDVIKQRLQLGYHRGILDCIQTVRQTEGLEAFYRSFPITLFMNIPYGCVMVAVNESIKQTLQPGGEFDTQTYMIAGSGAGAVAAFSTTPLDVVKTRLQTQ 907
            DWEDW P +G+F+HHM+AGS AG+ EH  +FP+DT+KT++QC         P+  A Q    ++   G  RL+RGV TM    +PAHALYFSVFE CK+  G + P H P  +  AG   TI HD VMTPMDVIKQRLQLGY+ G+++C+QT+ +TEGL A Y SFP TLFMN+PY  +MV+ NES+K+ L P GE +   Y+ +G+ A       T PLDV KTRLQTQ
Sbjct:    9 DWEDWTPEKGSFIHHMLAGSAAGVVEHCSIFPIDTIKTHMQCQRCALNPGKPQLTAFQTASMLIAKDGPRRLFRGVSTMLGASLPAHALYFSVFESCKEKFGADSPEHTPIQSGAAGVIGTIMHDLVMTPMDVIKQRLQLGYYSGVVNCVQTMVRTEGLRALYISFPTTLFMNLPYSMIMVSTNESMKKLLNPSGEINVGAYVFSGAIAXXXXXXITNPLDVTKTRLQTQ 238          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10115.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KLW9_9PHAE1.910e-13581.42Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A835YZ17_9STRA3.920e-12061.73Mitoferrin-like protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z185_9STRA1.880e-11859.32Mitoferrin-like protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3Y5R4_HETAK1.630e-9862.39Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3Y5E3_HETAK3.870e-9862.61Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
W7U8D3_9STRA2.280e-8654.55Mitoferrin-like protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S2RU47_9STRA1.010e-7956.19Hypothetical protein (Fragment) n=1 Tax=labyrinthu... [more]
D7G8Z1_ECTSI3.570e-7757.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A024GCU6_9STRA2.590e-7651.95Uncharacterized protein n=2 Tax=Albugo TaxID=65356... [more]
W4H6D4_9STRA4.410e-7652.61Uncharacterized protein n=4 Tax=Aphanomyces astaci... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10115contigC-tenellus_contig10115:3054..5658 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog653948.CCA15829
PFAMsMito_carr
Model size1926
Max annot lvl2759|Eukaryota
KEGG koko:K15113
KEGG TC2.A.29.5
Hectar predicted targeting categoryother localisation
GOsGO:0000041,GO:0003674,GO:0005215,GO:0005381,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006810,GO:0006811,GO:0006812,GO:0006826,GO:0006839,GO:0008150,GO:0008324,GO:0015075,GO:0015318,GO:0016020,GO:0016021,GO:0019866,GO:0022857,GO:0022890,GO:0030001,GO:0031090,GO:0031224,GO:0031966,GO:0031967,GO:0031975,GO:0034220,GO:0034755,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046873,GO:0046915,GO:0048250,GO:0048878,GO:0050801,GO:0051179,GO:0051234,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055085,GO:0065007,GO:0065008,GO:0097286,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:1990542
Exons4
Evalue3.19e-80
EggNOG OGsKOG0760@1|root,KOG0760@2759|Eukaryota
Ec32 ortholog descriptionMitochondrial carrier domain
Ec32 orthologEc-15_002540.1
Descriptioniron import into the mitochondrion
Cds size990
COG categoryU
BRITEko00000,ko02000,ko03029
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10115.2.2prot_C-tenellus_contig10115.2.2Choristocarpus tenellus KU2346polypeptideC-tenellus_contig10115 3438..4939 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789115.9170094-UTR-C-tenellus_contig10115:3053..31961680789115.9170094-UTR-C-tenellus_contig10115:3053..3196Choristocarpus tenellus KU2346UTRC-tenellus_contig10115 3054..3196 +
1680789115.92968-UTR-C-tenellus_contig10115:3363..34371680789115.92968-UTR-C-tenellus_contig10115:3363..3437Choristocarpus tenellus KU2346UTRC-tenellus_contig10115 3364..3437 +
1680789115.968257-UTR-C-tenellus_contig10115:4939..56581680789115.968257-UTR-C-tenellus_contig10115:4939..5658Choristocarpus tenellus KU2346UTRC-tenellus_contig10115 4940..5658 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789115.9380364-CDS-C-tenellus_contig10115:3437..37311680789115.9380364-CDS-C-tenellus_contig10115:3437..3731Choristocarpus tenellus KU2346CDSC-tenellus_contig10115 3438..3731 +
1680789115.945668-CDS-C-tenellus_contig10115:3878..40641680789115.945668-CDS-C-tenellus_contig10115:3878..4064Choristocarpus tenellus KU2346CDSC-tenellus_contig10115 3879..4064 +
1680789115.9573607-CDS-C-tenellus_contig10115:4429..49391680789115.9573607-CDS-C-tenellus_contig10115:4429..4939Choristocarpus tenellus KU2346CDSC-tenellus_contig10115 4430..4939 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig10115.2.2

>prot_C-tenellus_contig10115.2.2 ID=prot_C-tenellus_contig10115.2.2|Name=mRNA_C-tenellus_contig10115.2.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=330bp
MSDPSDWEDWDPSQGNFLHHMVAGSIAGITEHTVMFPVDTLKTYVQCMHE
CPERVAGQRVLEMVRGQGMLRLWRGVGTMFTGCVPAHALYFSVFEYCKDN
LGVNRPGHHPAGAAIAGACATIFHDAVMTPMDVIKQRLQLGYHRGILDCI
QTVRQTEGLEAFYRSFPITLFMNIPYGCVMVAVNESIKQTLQPGGEFDTQ
TYMIAGSGAGAVAAFSTTPLDVVKTRLQTQAAPAVVYYHHPSHQSGSEGA
KAGPRRGFSWAKQFWGGSGQGQGMSQGGIVLQGTAMHSAATRCTKGHCGA
EQPQVVLRYQGLLDAVSKQQPIGRSIWCG*
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mRNA from alignment at C-tenellus_contig10115:3054..5658+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig10115.2.2 ID=mRNA_C-tenellus_contig10115.2.2|Name=mRNA_C-tenellus_contig10115.2.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2605bp|location=Sequence derived from alignment at C-tenellus_contig10115:3054..5658+ (Choristocarpus tenellus KU2346)
TACTGTTTCATACTAGAAATACTGACACAGTGACCGAGACTGAAAGGATT GGTTTCGTTTCCTTGTTTATTGAAAACCAGGGGGGGACTTGCGTGGCCAG TCCCTTCCCAAACTACGTCGATTACTCTCCAGCTGGCTATTAGGTGATGG GAGGGGTCCGTTTTTTTGTGAAAGGAAAATTGAGCCCAAGCTAGACCTCT GAAACTTTGAAGCATTCCTGGAAAACATGGGAGGCTTTGTTTTTCACGCC TACCCTTGTTCCTTTCCCCCGCTTTCTGTTTCCATTCCTCTTATCTATAA CTACAACCAGGTTGCGCAACAGTACTGGTGGAAGGAAAAGGTGTGGTAAA ACTGCAATAATAACTTATCGTCAACCGATTTCAAATGTCGGACCCGTCTG ATTGGGAGGACTGGGACCCGTCCCAAGGAAACTTTTTACATCACATGGTG GCGGGGTCAATCGCGGGAATCACCGAACACACGGTTATGTTTCCCGTGGA CACGTTGAAAACCTACGTGCAATGCATGCATGAGTGCCCAGAGCGGGTGG CTGGGCAGAGAGTCCTGGAGATGGTGCGAGGACAGGGTATGCTGCGTCTC TGGCGTGGCGTAGGCACCATGTTTACTGGCTGCGTGCCAGCGCATGCCCT CTACTTCAGTGTGTTCGAGTACTGTAAGGTACATCCTCGTCATGCGTGCT TCTGATTATGATATCGATGCAAGGACTAGCACGAAATTGTTCAGAGAGAC ATGTACGTGATTTTTCTGTGCTTTGCTTTGTTGCTCTGTTTACGTATGTT TCCTCTGCTCTCACTATTTGCCCAGGACAACCTGGGCGTGAATAGACCGG GGCATCACCCTGCCGGTGCGGCAATTGCGGGGGCATGCGCGACCATCTTT CATGACGCTGTTATGACCCCAATGGATGTAATCAAGCAGCGCCTGCAGCT GGGCTACCACAGGGGCATCTTAGACTGTATACAAACAGTTAGACAAACAG AGGGTCTCGAGGTTTGTTGACATGGTATTTCCCCCTGGTTCAGTGCTTAA GTGATAATAAATGTACCCTTGAATGAGAGTTCCCTCTCAATTCTTCCTTA TGCTTGATATTTTCTCCTCCCCTTGCAGTGAGCCGAACTCTCTGCAACAT TCAAGTTACATGAGACACACCTTGTATCTCTACTGGATGCCTATCTATTG GGTTAGAGACTACACCGGTGAAGTGCCGAGATGAGAAGAATATGGAACCT CCTACCAAATATTCACCCACTCCCTCGATCGCAGACTACAGTGCAATCCA TGAACACAATTCAATTCATTCATGCACACCTCTTTTCTTCCCCTTGACAA ACCCCACTTCCTCCTCATCCTGGCAGGCATTCTACCGCAGCTTCCCCATT ACACTTTTTATGAACATTCCATACGGATGTGTGATGGTAGCTGTCAACGA GAGCATCAAGCAGACCTTACAACCTGGGGGTGAATTTGACACTCAAACGT ACATGATTGCTGGGAGCGGAGCTGGGGCAGTTGCTGCCTTTTCCACCACC CCGCTAGATGTGGTAAAGACTCGCCTGCAGACACAGGCAGCACCAGCTGT GGTGTATTATCATCATCCCTCACACCAAAGTGGATCAGAGGGTGCAAAAG CTGGACCTCGGCGAGGATTCAGCTGGGCTAAGCAGTTTTGGGGTGGATCA GGGCAGGGGCAGGGCATGAGTCAAGGGGGAATAGTATTGCAGGGAACTGC CATGCACAGCGCTGCAACACGTTGCACGAAGGGACATTGTGGTGCTGAGC AGCCACAGGTGGTGTTGCGATACCAGGGTCTTCTGGATGCGGTGAGTAAG CAACAGCCTATAGGAAGGAGCATATGGTGCGGCTAGGGTTAGTGTTACTG TTTTGTACTTGTGGTGGGGTTGAGGTTATTTTTATCATACTTTCGCCATG GATGCATGTTCAACTGAGCATGATTAAGTAACAGCTCGTGAAAGTGTTGA AGTTGAAGTAGACAGTGAGAGAAAATTTGTACTACCGTTAACGTTTTTAT TACAAGTACTTTAGTGGGCAAATGTTGAGTATAGTGCTTATGTGTTTTCT TCCCATAGGGTAAGTGTTGAATTTCATCAGCATTTTGTGGGGCTTTGGGT GCCTTCTATTGGGTGCAAATTTTTCAGATCGGTTTTGCTAGCAGGCAGAA CCACCTTGATATTATCAGGGCGCTTGCAATAATCTTCTGAATAGAGTAGC CTTCAAGTACGTGTATGGGAGGGGGTTTCTTTCAGAAAATTGACAGGGGG GAACACCCGTGAAATATTTTGTTCTTATTTATTTAAATGCTTTGCATTTA GACCACAGAGAATTTTTGGTCCGTGATAGTCCATAATAGTTCTCTTTTCA CTGTCTGCGAATTTTCCCTAGCGATCTGCCAGTAAAAAAGACTGAAACGG TTCTATTTTGAGGTTTGAACCAGAGCAGTAGTAGTAGTAGTATGAGCCTT TTTTTTATAGAAGCGTATGTCCTATTTTTTTTATAGAGCCAACAACTGAT CCGAGAAGAGGCTTGTTATCATTGGTGACTTCAAAAGTAGTTGAATTTCT CAAGG
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Coding sequence (CDS) from alignment at C-tenellus_contig10115:3054..5658+

>mRNA_C-tenellus_contig10115.2.2 ID=mRNA_C-tenellus_contig10115.2.2|Name=mRNA_C-tenellus_contig10115.2.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=990bp|location=Sequence derived from alignment at C-tenellus_contig10115:3054..5658+ (Choristocarpus tenellus KU2346)
ATGTCGGACCCGTCTGATTGGGAGGACTGGGACCCGTCCCAAGGAAACTT
TTTACATCACATGGTGGCGGGGTCAATCGCGGGAATCACCGAACACACGG
TTATGTTTCCCGTGGACACGTTGAAAACCTACGTGCAATGCATGCATGAG
TGCCCAGAGCGGGTGGCTGGGCAGAGAGTCCTGGAGATGGTGCGAGGACA
GGGTATGCTGCGTCTCTGGCGTGGCGTAGGCACCATGTTTACTGGCTGCG
TGCCAGCGCATGCCCTCTACTTCAGTGTGTTCGAGTACTGTAAGGACAAC
CTGGGCGTGAATAGACCGGGGCATCACCCTGCCGGTGCGGCAATTGCGGG
GGCATGCGCGACCATCTTTCATGACGCTGTTATGACCCCAATGGATGTAA
TCAAGCAGCGCCTGCAGCTGGGCTACCACAGGGGCATCTTAGACTGTATA
CAAACAGTTAGACAAACAGAGGGTCTCGAGGCATTCTACCGCAGCTTCCC
CATTACACTTTTTATGAACATTCCATACGGATGTGTGATGGTAGCTGTCA
ACGAGAGCATCAAGCAGACCTTACAACCTGGGGGTGAATTTGACACTCAA
ACGTACATGATTGCTGGGAGCGGAGCTGGGGCAGTTGCTGCCTTTTCCAC
CACCCCGCTAGATGTGGTAAAGACTCGCCTGCAGACACAGGCAGCACCAG
CTGTGGTGTATTATCATCATCCCTCACACCAAAGTGGATCAGAGGGTGCA
AAAGCTGGACCTCGGCGAGGATTCAGCTGGGCTAAGCAGTTTTGGGGTGG
ATCAGGGCAGGGGCAGGGCATGAGTCAAGGGGGAATAGTATTGCAGGGAA
CTGCCATGCACAGCGCTGCAACACGTTGCACGAAGGGACATTGTGGTGCT
GAGCAGCCACAGGTGGTGTTGCGATACCAGGGTCTTCTGGATGCGGTGAG
TAAGCAACAGCCTATAGGAAGGAGCATATGGTGCGGCTAG
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