mRNA_C-tenellus_contig10115.2.2 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10115.2.2 vs. uniprot
Match: A0A6H5KLW9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLW9_9PHAE) HSP 1 Score: 407 bits (1045), Expect = 1.910e-135 Identity = 184/226 (81.42%), Postives = 210/226 (92.92%), Query Frame = 2 Query: 233 DWEDWDPSQGNFLHHMVAGSIAGITEHTVMFPVDTLKTYVQCMHECPERVAGQRVLEMVRGQGMLRLWRGVGTMFTGCVPAHALYFSVFEYCKDNLGVNRPGHHPAGAAIAGACATIFHDAVMTPMDVIKQRLQLGYHRGILDCIQTVRQTEGLEAFYRSFPITLFMNIPYGCVMVAVNESIKQTLQPGGEFDTQTYMIAGSGAGAVAAFSTTPLDVVKTRLQTQA 910 DWEDWDPSQGNFLHHMVAGSIAGITEHTVM+PVDT KTYVQCM ECPE VAG+RV+EMVRGQGMLRLWRGVGTMFTGCVPAHALYFSV E CKD LGVN+PGH PAGAA+AGA AT+FHDAVMTPMDV+KQRLQLGYH+G+LDC+ T+++TEG +AFYRSFP TLFMNIPYGCVMVAVNES+K+ ++P G++D +T+++AGSGAGA+AA +T PLDVVKTRLQTQA Sbjct: 17 DWEDWDPSQGNFLHHMVAGSIAGITEHTVMYPVDTFKTYVQCMRECPEAVAGRRVMEMVRGQGMLRLWRGVGTMFTGCVPAHALYFSVLENCKDRLGVNQPGHQPAGAAVAGAAATVFHDAVMTPMDVVKQRLQLGYHKGMLDCVLTIQRTEGTQAFYRSFPTTLFMNIPYGCVMVAVNESLKRVMRPAGDYDAKTFLLAGSGAGAIAAVATNPLDVVKTRLQTQA 242
BLAST of mRNA_C-tenellus_contig10115.2.2 vs. uniprot
Match: A0A835YZ17_9STRA (Mitoferrin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ17_9STRA) HSP 1 Score: 370 bits (951), Expect = 3.920e-120 Identity = 200/324 (61.73%), Postives = 228/324 (70.37%), Query Frame = 2 Query: 233 DWEDWDPSQGNFLHHMVAGSIAGITEHTVMFPVDTLKTYVQCMHECPERVAGQRVLEMVRGQGMLRLWRGVGTMFTGCVPAHALYFSVFEYCKDNLGVNRPGHHPAGAAIAGACATIFHDAVMTPMDVIKQRLQLGYHRGILDCIQTVRQTEGLEAFYRSFPITLFMNIPYGCVMVAVNESIKQTLQPGGEFDTQTYMIAGSGAGAVAAFSTTPLDVVKTRLQTQAAPAVVYYHH--PSHQSGSEGAKAGPRRGFSWAKQFWGGSGQGQGMSQGGIVLQGTAM--------HS-AATRCTKGHCGAEQPQVVLRYQGLLDAVSK 1171 DWEDW +GNF+HHM+AGSIAGITEHTVMFPVDT+KT++QCM ECPER AG RVLEMVRGQGMLRLWRGVGTMF GCVPAHA YFSV E K G N GH P AA AG AT+FHDA MTPMDVIKQRLQLGY+RGI DC++T+ +TEG A YRSFP TLFMNIPYG VMVA NES+K L+P G+ T T+M AG GAGAVAA +TTPLDVVKTRLQTQA H P+ SG+ K G +G+ QGG G A+ HS AA RC KG CG E+P+V L+Y+GL+DAV + Sbjct: 13 DWEDWS-GEGNFVHHMLAGSIAGITEHTVMFPVDTIKTHIQCMRECPERQAGARVLEMVRGQGMLRLWRGVGTMFMGCVPAHAAYFSVLEASKSRFGANAGGHKPVAAAAAGGLATVFHDAFMTPMDVIKQRLQLGYYRGIGDCVRTIVRTEGARALYRSFPTTLFMNIPYGAVMVAANESLKTALRPRGDHTTATFMAAGCGAGAVAAAATTPLDVVKTRLQTQALLTAAGRAHAAPAAHSGNGLGKLPVLLG--------------RGLRQGGAGAGGGAVAAAMPAVFHSNAAGRCAKG-CG-EKPEVPLQYRGLVDAVRQ 319
BLAST of mRNA_C-tenellus_contig10115.2.2 vs. uniprot
Match: A0A835Z185_9STRA (Mitoferrin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z185_9STRA) HSP 1 Score: 366 bits (940), Expect = 1.880e-118 Identity = 191/322 (59.32%), Postives = 226/322 (70.19%), Query Frame = 2 Query: 233 DWEDWDPSQGNFLHHMVAGSIAGITEHTVMFPVDTLKTYVQCMHECPERVAGQRVLEMVRGQGMLRLWRGVGTMFTGCVPAHALYFSVFEYCKDNLGVNRPGHHPAGAAIAGACATIFHDAVMTPMDVIKQRLQLGYHRGILDCIQTVRQTEGLEAFYRSFPITLFMNIPYGCVMVAVNESIKQTLQPGGEFDTQTYMIAGSGAGAVAAFSTTPLDVVKTRLQTQAAPAVVYYHHPSHQSGSEGAKAGPRRGFSWAKQFWGGSGQGQGMSQGG--------IVLQGTAMHS-AATRCTKGHCGAEQPQVVLRYQGLLDAVSK 1171 DWEDW +GNF+HHM+AGSIAG+TEHTVMFPVDTLKT++QCM ECPER AG RVLEMVRGQGMLRLWRGVGTMF GCVPAHA YFS+ E CK+ G N GH P AA AG AT+FHDAVMTPMDVIKQRLQLGY+RGI DC++T+ + EG+ A YRSFP TLFMNIPYG +MVA NES+K L+P G+ T TYM+AG GAGAVAA +TTPLDVVKT LQTQA A H + + + A F G + G+ + + L HS AA RC +G CG E+P+V L+Y+G +DA + Sbjct: 13 DWEDWS-GEGNFVHHMLAGSIAGVTEHTVMFPVDTLKTHIQCMRECPERQAGSRVLEMVRGQGMLRLWRGVGTMFVGCVPAHAAYFSILELCKERFGANGGGHAPVAAAAAGVFATVFHDAVMTPMDVIKQRLQLGYYRGIGDCVRTIARAEGVGALYRSFPTTLFMNIPYGAIMVAANESLKTALRPRGDHTTATYMLAGCGAGAVAAAATTPLDVVKTMLQTQAIHA-----HATRYAAAAAAPHVAAPAXXXXPIFAGTALASSGLLRRACAAPAGATVALMPAVFHSNAAARCIQG-CG-EKPEVKLQYRGFVDAARE 326
BLAST of mRNA_C-tenellus_contig10115.2.2 vs. uniprot
Match: A0A7S3Y5R4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5R4_HETAK) HSP 1 Score: 314 bits (804), Expect = 1.630e-98 Identity = 146/234 (62.39%), Postives = 180/234 (76.92%), Query Frame = 2 Query: 233 DWEDWDPSQGNFLHHMVAGSIAGITEHTVMFPVDTLKTYVQC---MHECPERVAGQR--VLEMVRGQGMLRLWRGVGTMFTGCVPAHALYFSVFEYCKDNLGVNRPGHHPAGAAIAGACATIFHDAVMTPMDVIKQRLQLGYHRGILDCIQTVRQTEGLEAFYRSFPITLFMNIPYGCVMVAVNESIKQTLQPGGEFDTQTYMIAGSGAGAVAAFSTTPLDVVKTRLQTQAAPA 919 +WEDWDP +G+F HMVAGS AG+ EH M+P+DTLKT+VQC EC R + ++ ++ QGMLRLWRGV TM GC+PAHA YFSV E CK++ GVNRPGHHP AA GA A++FHD +MTP+DV+KQRLQLGY+RGI DC +TV +TEG +AF+ S PITL MNIPYGC+MVA NES+K+ L+PGG++D T+M AG+GAGA A+ TTPLDVVKTRLQ Q A A Sbjct: 11 EWEDWDPEKGSFAVHMVAGSCAGVVEHCSMYPIDTLKTHVQCHKPRQECSSRFICRSFSAIDFIQKQGMLRLWRGVNTMILGCIPAHAAYFSVVELCKESFGVNRPGHHPLAAAATGAIASVFHDGIMTPLDVVKQRLQLGYYRGIRDCARTVYRTEGAQAFFVSLPITLAMNIPYGCIMVATNESLKRVLRPGGDYDLGTHMAAGTGAGAAASLVTTPLDVVKTRLQVQRATA 244
BLAST of mRNA_C-tenellus_contig10115.2.2 vs. uniprot
Match: A0A7S3Y5E3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5E3_HETAK) HSP 1 Score: 312 bits (799), Expect = 3.870e-98 Identity = 144/230 (62.61%), Postives = 178/230 (77.39%), Query Frame = 2 Query: 233 DWEDWDPSQGNFLHHMVAGSIAGITEHTVMFPVDTLKTYVQC---MHECPERVAGQR--VLEMVRGQGMLRLWRGVGTMFTGCVPAHALYFSVFEYCKDNLGVNRPGHHPAGAAIAGACATIFHDAVMTPMDVIKQRLQLGYHRGILDCIQTVRQTEGLEAFYRSFPITLFMNIPYGCVMVAVNESIKQTLQPGGEFDTQTYMIAGSGAGAVAAFSTTPLDVVKTRLQTQ 907 +WEDWDP +G+F HMVAGS AG+ EH M+P+DTLKT+VQC EC R + ++ ++ QGMLRLWRGV TM GC+PAHA YFSV E CK++ GVNRPGHHP AA GA A++FHD +MTP+DV+KQRLQLGY+RGI DC +TV +TEG +AF+ S PITL MNIPYGC+MVA NES+K+ L+PGG++D T+M AG+GAGA A+ TTPLDVVKTRLQ Q Sbjct: 11 EWEDWDPEKGSFAVHMVAGSCAGVVEHCSMYPIDTLKTHVQCHKPRQECSSRFICRSFSAIDFIQKQGMLRLWRGVNTMILGCIPAHAAYFSVVELCKESFGVNRPGHHPLAAAATGAIASVFHDGIMTPLDVVKQRLQLGYYRGIRDCARTVYRTEGAQAFFVSLPITLAMNIPYGCIMVATNESLKRVLRPGGDYDLGTHMAAGTGAGAAASLVTTPLDVVKTRLQKQ 240
BLAST of mRNA_C-tenellus_contig10115.2.2 vs. uniprot
Match: W7U8D3_9STRA (Mitoferrin-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U8D3_9STRA) HSP 1 Score: 286 bits (733), Expect = 2.280e-86 Identity = 144/264 (54.55%), Postives = 181/264 (68.56%), Query Frame = 2 Query: 233 DWEDWDPSQGNFLHHMVAGSIAGITEHTVMFPVDTLKTYVQCMHECP-------------------------ERVA-GQRVLE-------------MVRGQGMLRLWRGVGTMFTGCVPAHALYFSVFEYCKDNLGVNRPGHHPAGAAIAGACATIFHDAVMTPMDVIKQRLQLGYHRGILDCIQTVRQTEGLEAFYRSFPITLFMNIPYGCVMVAVNESIKQTLQPGGEFDTQTYMIAGSGAGAVAAFSTTPLDVVKTRLQTQ 907 DWEDWDP G+F+HHM+AGSIAGI EHT+M+PVDT+KT++QC EC E A G V+E +V+ +G LRLWRGV TM + CVPAHA YFS E CK+ GVN H+ GAA AGA AT+FHD++MTPMDVIKQRLQLGY++G+ C ++ + EG+ AFY S P+TLFMN+PYG VMVA NESIK+ L+P G++ T TY++AGSGAGA+AA +TTPLD++KTRLQTQ Sbjct: 31 DWEDWDPKTGSFVHHMIAGSIAGIAEHTLMYPVDTIKTFMQCQ-ECSLTANCLKQRTVVAAAAAVSGREGLGEAAARGASVVEGSVGLTSFEAAFRLVQKEGTLRLWRGVSTMLSACVPAHAAYFSALESCKERFGVNGREHNVMGAAAAGAVATLFHDSIMTPMDVIKQRLQLGYYKGLAHCAVSIVRQEGVRAFYLSLPVTLFMNLPYGGVMVAANESIKRLLKPAGDYTTGTYLLAGSGAGALAAAATTPLDLIKTRLQTQ 293
BLAST of mRNA_C-tenellus_contig10115.2.2 vs. uniprot
Match: A0A7S2RU47_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RU47_9STRA) HSP 1 Score: 261 bits (667), Expect = 1.010e-79 Identity = 127/226 (56.19%), Postives = 156/226 (69.03%), Query Frame = 2 Query: 233 DWEDWDPSQGN-FLHHMVAGSIAGITEHTVMFPVDTLKTYVQCMHECPERVAGQRVLEMVRGQGMLRLWRGVGTMFTGCVPAHALYFSVFEYCKDNLGVNRPGHHPAGAAIAGACATIFHDAVMTPMDVIKQRLQLGYHRGILDCIQTVRQTEGLEAFYRSFPITLFMNIPYGCVMVAVNESIKQTLQPGGEFDTQTYMIAGSGAGAVAAFSTTPLDVVKTRLQTQ 907 +WE+WDP G F H +AGS AG EH +FP DT+KT++Q E + + +VR +GM RLWRGV TMFT CVPAHA YFS+FE K G N GHHP AA +GA ATI HD++MTPMDV+KQRLQLG++ G+ DC ++ +TEG AF+ SFP TLFMNIPY +MVA NES K+ L P E++ + I+G AGAVAA T PLDVVKTRLQTQ Sbjct: 10 EWEEWDPESGTTFFVHAMAGSCAGAAEHCAIFPFDTIKTHMQA-----EGASSSSIRSLVRQEGMFRLWRGVSTMFTACVPAHAAYFSLFEQSKIYFGANEEGHHPVAAAASGAIATIAHDSIMTPMDVVKQRLQLGFYNGMSDCFWSIVRTEGAGAFFLSFPTTLFMNIPYAGIMVASNESFKKVLNPTNEYNLPVFFISGGMAGAVAAAFTNPLDVVKTRLQTQ 230
BLAST of mRNA_C-tenellus_contig10115.2.2 vs. uniprot
Match: D7G8Z1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Z1_ECTSI) HSP 1 Score: 255 bits (652), Expect = 3.570e-77 Identity = 127/221 (57.47%), Postives = 158/221 (71.49%), Query Frame = 2 Query: 509 KDNLGVNRPGHHPAGAAIAGACATIFHDAVMTPMDVIKQRLQLGYHRGILDCIQTVRQTEGLEAFYRSFPITLFMNIPYGCVMVAVNESIKQTLQPGGEFDTQTYMIAGSGAGAVAAFSTTPLDVVKTRLQTQAAPAVVYYHHPSHQSGSEGAKAGPRRGFSWAKQFWGGSGQGQGMSQGGIVLQGTAMHSAATRCTKGHCGAEQPQVVLRYQGLLDAVSK 1171 +D LGVN+PGH P GAA+AGA AT+FHDAVMTPMDV+KQRLQLGYH+G+LDC+ T+++TEG +AFYRSFP TLFMNIPYGCVMVAVNES+K ++P G++DT+T+++AGSGAGAVAA +T PLDVVKTRLQTQA G+ A GF+ K+ GT +HSAA RC G CGA++P V L+YQGL+DAV + Sbjct: 13 QDRLGVNQPGHQPTGAAVAGAAATVFHDAVMTPMDVVKQRLQLGYHKGMLDCVLTIQRTEGTQAFYRSFPTTLFMNIPYGCVMVAVNESLKHVMRPAGDYDTKTFLLAGSGAGAVAAVATNPLDVVKTRLQTQAF------------RGAAAPLAARSEGFAAPKEG----------------ATGTGLHSAAARCATGRCGADKPVVTLQYQGLVDAVRQ 205
BLAST of mRNA_C-tenellus_contig10115.2.2 vs. uniprot
Match: A0A024GCU6_9STRA (Uncharacterized protein n=2 Tax=Albugo TaxID=65356 RepID=A0A024GCU6_9STRA) HSP 1 Score: 257 bits (656), Expect = 2.590e-76 Identity = 120/231 (51.95%), Postives = 161/231 (69.70%), Query Frame = 2 Query: 233 DWEDWDPSQGNFLHHMVAGSIAGITEHTVMFPVDTLKTYVQCMHEC------PERVAGQRVLEMVRGQGMLRLWRGVGTMFTGCVPAHALYFSVFEYCKDNLGVNRPGHHPAGAAIAGACATIFHDAVMTPMDVIKQRLQLGYHRGILDCIQTVRQTEGLEAFYRSFPITLFMNIPYGCVMVAVNESIKQTLQPGGEFDTQTYMIAGSGAGAVAAFSTTPLDVVKTRLQTQ 907 DWE+W P +G+FLHHM+AGS AG+ EH +FP+DT+KT++QC +C + A + + +++ +G LRL+RGV TM +PAHALYFS+FEY K G NR P + AG C TI HD +MTPMD++KQRLQLGY+ G+ +C++T+ +TEGL AFY SFP TL MN+PY +MV+ NES K+ L P GE + Y+ +G+ AGA+A T PLDV KTRLQTQ Sbjct: 30 DWEEWSPEKGSFLHHMMAGSAAGVAEHVSIFPIDTIKTHMQC-EQCHWSGSSSKSSALETLRRLLKEEGPLRLFRGVSTMLGASLPAHALYFSIFEYAKRTFGANRAEPTPFASGAAGVCGTICHDLIMTPMDLVKQRLQLGYYSGVWNCMKTITRTEGLRAFYISFPTTLLMNLPYSMIMVSANESFKKMLNPTGEMNVIAYLSSGAAAGALAGALTNPLDVAKTRLQTQ 259
BLAST of mRNA_C-tenellus_contig10115.2.2 vs. uniprot
Match: W4H6D4_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H6D4_9STRA) HSP 1 Score: 255 bits (651), Expect = 4.410e-76 Identity = 121/230 (52.61%), Postives = 155/230 (67.39%), Query Frame = 2 Query: 233 DWEDWDPSQGNFLHHMVAGSIAGITEHTVMFPVDTLKTYVQCMHEC-----PERVAGQRVLEMVRGQGMLRLWRGVGTMFTGCVPAHALYFSVFEYCKDNLGVNRPGHHPAGAAIAGACATIFHDAVMTPMDVIKQRLQLGYHRGILDCIQTVRQTEGLEAFYRSFPITLFMNIPYGCVMVAVNESIKQTLQPGGEFDTQTYMIAGSGAGAVAAFSTTPLDVVKTRLQTQ 907 DWEDW P +G+F+HHM+AGS AG+ EH +FP+DT+KT++QC P+ A Q ++ G RL+RGV TM +PAHALYFSVFE CK+ G + P H P + AG TI HD VMTPMDVIKQRLQLGY+ G+++C+QT+ +TEGL A Y SFP TLFMN+PY +MV+ NES+K+ L P GE + Y+ +G+ A T PLDV KTRLQTQ Sbjct: 9 DWEDWTPEKGSFIHHMLAGSAAGVVEHCSIFPIDTIKTHMQCQRCALNPGKPQLTAFQTASMLIAKDGPRRLFRGVSTMLGASLPAHALYFSVFESCKEKFGADSPEHTPIQSGAAGVIGTIMHDLVMTPMDVIKQRLQLGYYSGVVNCVQTMVRTEGLRALYISFPTTLFMNLPYSMIMVSTNESMKKLLNPSGEINVGAYVFSGAIAXXXXXXITNPLDVTKTRLQTQ 238 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10115.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10115.2.2 >prot_C-tenellus_contig10115.2.2 ID=prot_C-tenellus_contig10115.2.2|Name=mRNA_C-tenellus_contig10115.2.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=330bp MSDPSDWEDWDPSQGNFLHHMVAGSIAGITEHTVMFPVDTLKTYVQCMHEback to top mRNA from alignment at C-tenellus_contig10115:3054..5658+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10115.2.2 ID=mRNA_C-tenellus_contig10115.2.2|Name=mRNA_C-tenellus_contig10115.2.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2605bp|location=Sequence derived from alignment at C-tenellus_contig10115:3054..5658+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10115:3054..5658+ >mRNA_C-tenellus_contig10115.2.2 ID=mRNA_C-tenellus_contig10115.2.2|Name=mRNA_C-tenellus_contig10115.2.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=990bp|location=Sequence derived from alignment at C-tenellus_contig10115:3054..5658+ (Choristocarpus tenellus KU2346)back to top |