mRNA_C-tenellus_contig10115.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10115.1.1 vs. uniprot
Match: D7G8Y9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Y9_ECTSI) HSP 1 Score: 145 bits (366), Expect = 1.240e-36 Identity = 68/115 (59.13%), Postives = 91/115 (79.13%), Query Frame = 3 Query: 264 MNPSRRLAQWLGGHLAQYVDDVDNDKLQAGLWDGDLLLQDLHIRSDAPRKLRLPLVLRQGAVEKIRLQVPWKTFASGRASLSVAGVTLVLEPLGNAIYDERIEEAIRAAVFAQKQ 608 MN R + QWL G L++YV +VD D L AGLW GDL+L+DL +R+D RKL LP+VL+QG+V+ +R+QVPWK+F S +ASL V+G+TLVLEPLG+A YD+ IE +R A+FA+KQ Sbjct: 1 MNLFRVIPQWLAGKLSEYVHNVDFDSLGAGLWSGDLVLRDLQVRTDVSRKLHLPVVLKQGSVDLVRIQVPWKSFGSMKASLQVSGLTLVLEPLGSANYDDEIERGLRDAIFAKKQ 115
BLAST of mRNA_C-tenellus_contig10115.1.1 vs. uniprot
Match: A0A835Z9T2_9STRA (Vacuolar protein sorting-associated protein 13A N-terminal domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9T2_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 6.850e-24 Identity = 49/92 (53.26%), Postives = 65/92 (70.65%), Query Frame = 3 Query: 264 MNPSRRLAQWLGGHLAQYVDDVDNDKLQAGLWDGDLLLQDLHIRSDAPRKLRLPLVLRQGAVEKIRLQVPWKTFASGRASLSVAGVTLVLEP 539 MN S++LA L L +YV +VD D LQ GLW GDL L++L +R DA RK LP+VLR G+V +RL+VPWK+F SG +L V+ + +VLEP Sbjct: 1 MNLSKKLANVLARTLGEYVQNVDEDSLQVGLWAGDLQLKNLELRPDALRKAELPVVLRSGSVGTVRLKVPWKSFGSGGVALVVSDLKVVLEP 92
BLAST of mRNA_C-tenellus_contig10115.1.1 vs. uniprot
Match: A0A3M7PZ37_BRAPC (Vacuolar sorting-associated 13A n=1 Tax=Brachionus plicatilis TaxID=10195 RepID=A0A3M7PZ37_BRAPC) HSP 1 Score: 77.0 bits (188), Expect = 6.920e-13 Identity = 31/98 (31.63%), Postives = 67/98 (68.37%), Query Frame = 3 Query: 282 LAQWLGGHLAQYVDDVDNDKLQAGLWDGDLLLQDLHIRSDAPRKLRLPLVLRQGAVEKIRLQVPWKTFASGRASLSVAGVTLVLEPLGNAIYDERIEE 575 +A +L +L+ Y++D+D+ L+ G+W+G++ L++LH++S+A +L LP+ + G ++K+ L++PWK+ + S+ G+T+++ P + +DE E+ Sbjct: 7 VAYFLDKYLSNYIEDLDSSNLKIGIWNGNVTLENLHLKSNALDELELPIRIVFGHLKKLTLKIPWKSLYTESVKASIDGLTILIAPKSSFSFDEESEK 104
BLAST of mRNA_C-tenellus_contig10115.1.1 vs. uniprot
Match: A0A814GG19_9BILA (Hypothetical protein n=1 Tax=Adineta steineri TaxID=433720 RepID=A0A814GG19_9BILA) HSP 1 Score: 67.8 bits (164), Expect = 6.060e-11 Identity = 27/92 (29.35%), Postives = 55/92 (59.78%), Query Frame = 3 Query: 306 LAQYVDDVDNDKLQAGLWDGDLLLQDLHIRSDAPRKLRLPLVLRQGAVEKIRLQVPWKTFASGRASLSVAGVTLVLEPLGNAIYDERIEEAI 581 L Y++D D+ +L+ LWDG++ L+++H++++A +PL + G +EK+++ +PWK + + + G L++ P + +YD E I Sbjct: 15 LGNYIEDFDSHQLKINLWDGNITLENVHLKTNALNDFNVPLEIITGYLEKLKIHIPWKYLYTHPTKIEIDGFFLLVAPKTDVVYDPEKAEQI 106
BLAST of mRNA_C-tenellus_contig10115.1.1 vs. uniprot
Match: A0A6F9DWS6_9ASCI (Vacuolar protein sorting-associated protein 13A-like n=1 Tax=Phallusia mammillata TaxID=59560 RepID=A0A6F9DWS6_9ASCI) HSP 1 Score: 71.2 bits (173), Expect = 7.240e-11 Identity = 32/109 (29.36%), Postives = 63/109 (57.80%), Query Frame = 3 Query: 282 LAQWLGGHLAQYVDDVDNDKLQAGLWDGDLLLQDLHIRSDAPRKLRLPLVLRQGAVEKIRLQVPWKTFASGRASLSVAGVTLVLEPLGNAIYDERIEEAIRAAVFAQKQ 608 + + + +L +Y++++D +L+ G+W GD +L++LH++ DA + L LP+ ++ G + K+ L++PWK ++ G+ L+ P + YD +E IR Q Q Sbjct: 7 VVELMNKYLGEYIENLDASQLKLGIWGGDAVLENLHVKGDALKDLNLPVQIKSGHIGKLTLKIPWKNLYKEAVEATLDGLFLLAVPNSSMEYDAE-KEKIREQESKQAQ 114
BLAST of mRNA_C-tenellus_contig10115.1.1 vs. uniprot
Match: UPI000C25429D (vacuolar protein sorting-associated protein 13-like n=1 Tax=Leptinotarsa decemlineata TaxID=7539 RepID=UPI000C25429D) HSP 1 Score: 70.1 bits (170), Expect = 1.170e-10 Identity = 35/109 (32.11%), Postives = 67/109 (61.47%), Query Frame = 3 Query: 282 LAQWLGGHLAQYVDDVDNDKLQAGLWDGDLLLQDLHIRSDAPRKLRLPLVLRQGAVEKIRLQVPWKTFASGRASLSVAGVTLVLEPLGNAIYDERIEEAIRAAVFAQKQ 608 L+ L +L +V+++D ++L G+W GD+ L++L +++ A +L LP+ + G +EK+ L++PWKT + + + + G+ L+L+P YDE ++E R F K+ Sbjct: 7 LSYILNKYLGTFVENLDANQLNVGIWGGDVELKNLVLKTSALDELDLPVEIVYGVIEKLVLKIPWKTVYTSPSVVCLEGIYLLLQPNQQVQYDE-VKEEKRKLEFKMKE 114
BLAST of mRNA_C-tenellus_contig10115.1.1 vs. uniprot
Match: A0A7S0QMY0_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QMY0_9CRYP) HSP 1 Score: 70.5 bits (171), Expect = 1.320e-10 Identity = 30/92 (32.61%), Postives = 52/92 (56.52%), Query Frame = 3 Query: 282 LAQWLGGHLAQYVDDVDNDKLQAGLWDGDLLLQDLHIRSDAPRKLRLPLVLRQGAVEKIRLQVPWKTFASGRASLSVAGVTLVLEPLGNAIY 557 L+ +L L Q+V +D + L+ G+W G+++L+DL +RSD L P LR G + +R+++PW + S + + + L+L PL Y Sbjct: 6 LSNFLSSRLTQFVKHIDTENLKVGIWKGEVVLEDLELRSDCFEGLDAPFFLRGGYIGNLRIKIPWNSLTSKPVVIELEKIHLILHPLEGTTY 97
BLAST of mRNA_C-tenellus_contig10115.1.1 vs. uniprot
Match: A0A821CSA1_9BILA (Hypothetical protein (Fragment) n=1 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A821CSA1_9BILA) HSP 1 Score: 67.4 bits (163), Expect = 1.710e-10 Identity = 28/90 (31.11%), Postives = 55/90 (61.11%), Query Frame = 3 Query: 306 LAQYVDDVDNDKLQAGLWDGDLLLQDLHIRSDAPRKLRLPLVLRQGAVEKIRLQVPWKTFASGRASLSVAGVTLVLEPLGNAIYDERIEE 575 L Y++D D+ +L+ LW GD++L+++H++++A +PL +R G +EK+R+ +PWK + + + G L++ P + YD +E Sbjct: 15 LGNYIEDFDSHQLKIHLWTGDIILENVHLKTNALNDFNVPLEIRTGYLEKLRIHIPWKHLYTYPTKIELDGFYLLVTPKTDVNYDVERKE 104
BLAST of mRNA_C-tenellus_contig10115.1.1 vs. uniprot
Match: A0A816F6L2_9BILA (Hypothetical protein n=2 Tax=Rotaria sordida TaxID=392033 RepID=A0A816F6L2_9BILA) HSP 1 Score: 68.6 bits (166), Expect = 1.770e-10 Identity = 31/94 (32.98%), Postives = 59/94 (62.77%), Query Frame = 3 Query: 294 LGGHLAQYVDDVDNDKLQAGLWDGDLLLQDLHIRSDAPRKLRLPLVLRQGAVEKIRLQVPWKTFASGRASLSVAGVTLVLEPLGNAIYDERIEE 575 L +L+ Y++++D KL+ LW G+++L++L+++S+A L LP+ + G +EK+ L+VPWKT ++ G+ L++ P YD + +E Sbjct: 11 LDKYLSDYIENLDTKKLKIDLWSGNVVLENLYLKSNALDDLDLPVTISLGYLEKLTLEVPWKTIYRSPTKATIDGLFLLVIPKTEVEYDVKRDE 104
BLAST of mRNA_C-tenellus_contig10115.1.1 vs. uniprot
Match: UPI00193977E2 (vacuolar protein sorting-associated protein 13C-like isoform X1 n=2 Tax=Styela clava TaxID=7725 RepID=UPI00193977E2) HSP 1 Score: 70.1 bits (170), Expect = 1.800e-10 Identity = 27/90 (30.00%), Postives = 57/90 (63.33%), Query Frame = 3 Query: 303 HLAQYVDDVDNDKLQAGLWDGDLLLQDLHIRSDAPRKLRLPLVLRQGAVEKIRLQVPWKTFASGRASLSVAGVTLVLEPLGNAIYDERIE 572 +L+ Y++++D +L+ G+W GD +L++LH++ DA + L LP+ ++ G + K+ L++PWK ++ G+ ++ P + YD++ E Sbjct: 14 YLSAYIENLDASQLKLGIWGGDAVLENLHVKGDALKDLDLPVTIKSGFIGKLTLKIPWKNLYKDAVEATLDGLYILAVPNNSIQYDDKKE 103 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10115.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10115.1.1 >prot_C-tenellus_contig10115.1.1 ID=prot_C-tenellus_contig10115.1.1|Name=mRNA_C-tenellus_contig10115.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=115bp MNPSRRLAQWLGGHLAQYVDDVDNDKLQAGLWDGDLLLQDLHIRSDAPRKback to top mRNA from alignment at C-tenellus_contig10115:1396..2831- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10115.1.1 ID=mRNA_C-tenellus_contig10115.1.1|Name=mRNA_C-tenellus_contig10115.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1436bp|location=Sequence derived from alignment at C-tenellus_contig10115:1396..2831- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10115:1396..2831- >mRNA_C-tenellus_contig10115.1.1 ID=mRNA_C-tenellus_contig10115.1.1|Name=mRNA_C-tenellus_contig10115.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=345bp|location=Sequence derived from alignment at C-tenellus_contig10115:1396..2831- (Choristocarpus tenellus KU2346)back to top |