mRNA_C-tenellus_contig10112.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10112.1.1 vs. uniprot
Match: UPI00131E791D (T9SS type A sorting domain-containing protein n=1 Tax=Brumimicrobium mesophilum TaxID=392717 RepID=UPI00131E791D) HSP 1 Score: 110 bits (275), Expect = 6.940e-24 Identity = 96/266 (36.09%), Postives = 134/266 (50.38%), Query Frame = 1 Query: 1 NGGGTFTSGTEFSFGASAE-DVAVADVDGXXDMDVIVGG----NIVGGIPDGYITVFKNMDGLGSFDTGVNITTPYLSFANDNCVH-DFDVDGDVDLLVAD-----ASVLRFF*NDGTGTFSPAVS-VAPGLNIWHCDIGDINGDGEIDIMYPDSSDGAHLVWLTGDGTGSITKPIYLAFSEITLKASFFDPILADLDNDGDSDILLNRV---GLDTTEMYEKLDGKGTFS--TGSSISSVRVDAPWGLYA-GDVDGDTDLDLLVS 744 +G GTF SF +S + +A AD+DG D DV++ G N+ YIT DGLG F NI TP+++ + D D DGD D+L+ + V F NDG G FS + S V G++ D D+NGDG +DI++ + A + GDG GS ++ E++ A F+ D+D DGD DILL + GL +++Y DG G F+ T +IS V WG A DVDGD D DLL++ Sbjct: 237 DGQGTFLEEVNVSFISSNDGSIAFADIDGDGDQDVLISGVNSLNV-------YITKLYINDGLGIFTE--NINTPFINLRGTSIAFSDADNDGDQDVLITGETSTFSQVANLFLNDGFGVFSLSTSAVFDGVHSGKVDFADMNGDGNLDILFSGRAGFAVTNYYIGDGLGSYSEVTKSLLEEVSNSAHKFE----DIDGDGDEDILLTGMKASGLIISKLYNN-DGFGVFNEITTDTISDVY----WGDVAFEDVDGDGDQDLLIT 484
BLAST of mRNA_C-tenellus_contig10112.1.1 vs. uniprot
Match: UPI00165541A0 (T9SS type A sorting domain-containing protein n=1 Tax=Kordia aestuariivivens TaxID=2759037 RepID=UPI00165541A0) HSP 1 Score: 104 bits (259), Expect = 9.130e-22 Identity = 86/232 (37.07%), Postives = 117/232 (50.43%), Query Frame = 1 Query: 61 VAVADVDGXXDMDVIVGGNIVGGIPDGYITVFKNMDGLGSFDTGVNITTPYLSFANDNCVHDFDVDGDVDLLVA--DASVLRFF*N-DGTGTFSPAVSVAPGL-NIWHCDIGDINGDGEIDIMYPDSSDGAHLVWLTG-DGTGSITKPIYLAFSEITLKASFFDPILA-DLDNDGDSDILLNRVGLDTTEMYEKLDGKGTFSTGSSISSVRVDAPWGLYAGDVDGDTDLDLL 738 V AD+DG D+D I G G G I F+N DG GS+ ITT + A D D DGD+D+L A D + + ++ N DG GTF P + G N D++GDG++DI+ S+ + +VW DG G+ + A IT A F + A D+D DGD DIL G D YE DG+G F T + S D+ +YA D+DGD D+D+L Sbjct: 397 VYAADIDGDGDLDAISGS----GGSFGNIAWFENTDGQGSYGPQKIITTD-IDDAESVFAIDLDGDGDIDVLSASYDDNKIAWYENTDGQGTFGPQQIITTGASNAESVYAADLDGDGDMDIVSTYSTISS-VVWFENTDGQGN-----FGARQTITYNADFAQAVYAEDIDGDGDMDILSASSGDDKIAWYENTDGQGNFGT-QQVISTNADSASSVYAIDLDGDGDIDVL 616
BLAST of mRNA_C-tenellus_contig10112.1.1 vs. uniprot
Match: A0A1F3PQL1_9BACT (Por_Secre_tail domain-containing protein n=2 Tax=Bacteroidetes TaxID=976 RepID=A0A1F3PQL1_9BACT) HSP 1 Score: 100 bits (249), Expect = 1.750e-20 Identity = 79/237 (33.33%), Postives = 123/237 (51.90%), Query Frame = 1 Query: 52 AEDVAVADVDGXXDMDVIVGGNIVGGIPDGYITVFKNMDGLGSFDTGVNITTPYLSFANDNCVHDFDVDGDVDLLVA--DASVLRFF*N-DGTGTFSP--AVSVAP-GLNIWHCDIGDINGDGEIDIMYPDSSDGAHLVWLTGDGTGSI-TKPIYLAFSEITLKASFFDPIL-ADLDNDGDSDILLNRVGLDTTEMYEKLDGKGTFSTGSSISSVRVDAPWGLYAGDVDGDTDLDLL 738 A V AD+DG DMDV+ + D I ++N DG G+F T ITT + +A+ D D DGD+D++ + D + ++ N DG GTF ++ P G + +C DI+GDG++D++ S+D + DG G+ T+ + I++ A+ + + AD+D DGD D+L D YE DG GTF T + S+ + +Y GD+DGD D+D+L Sbjct: 40 ASSVYCADIDGDGDMDVLSAS-----MDDNKIAWYENKDGNGTFGTQQVITTD-VDWASSVFASDLDGDGDLDVVSSSGDGIDITWYENTDGNGTFGAQQVITADPNGASAVYCS--DIDGDGDMDVLSALSNDNKIAWYENTDGNGTFGTQQV------ISINANGANSVYCADMDGDGDMDVLSASWNDDKIAWYENTDGNGTFGT-QQVISINANGANSVYCGDIDGDGDMDVL 261
BLAST of mRNA_C-tenellus_contig10112.1.1 vs. uniprot
Match: A0A7Y5NQW7_9DELT (VCBS repeat-containing protein n=1 Tax=Polyangiaceae bacterium TaxID=2268199 RepID=A0A7Y5NQW7_9DELT) HSP 1 Score: 99.4 bits (246), Expect = 3.820e-20 Identity = 84/261 (32.18%), Postives = 128/261 (49.04%), Query Frame = 1 Query: 1 NGGGTFTSGTEFSFG---ASAEDVAVADVDGXXDMDVIVGGNIVGGIPDGYITVFKNMDGLGSFDTGVNITTPYLSFANDNCVHDFDVDGDVDLLVA------DASVLRFF*NDGTGTFSPAVSVAP----GLNIWHCDIGDINGDGEIDIMYPDSSDGAHLVWLTGDGTGSITKPIYLAFSEITLKASFFDPILADLDNDGDSDILLNRVGLDTTEMYEKLDGKGTFSTGSSISSVRVDAPWGLYAG-DVDGDTDLDLLV 741 NG G F+ G+ FG +AV DVDG D+DV + G G D + + + G + + T A + D D DGD+DL+V + + + NDGTG F+ + P G+N D+ D++GD ++DI+ ++ G + +WL DGTG+ + AFS L + P+L D+DNDGD D+L++ VG + TE DG G F+ ++ + A L A D DGD D D++V Sbjct: 85 NGSGVFSDGSAM-FGDLVVPVRQIAVGDVDGDGDVDVYIPG--AGNEMDDKLLI-QTAPGTFADEAADRFATLIAHDAGFVRMGDLDNDGDLDLVVGGGYFDDNGAPATLYFNDGTGNFADGGANIPADIDGVNPDDVDLADVDGDFDLDILI-NAHSGPNALWLN-DGTGNFAEGAVAAFSNSALH---YGPVLCDVDNDGDLDMLVDNVGPNYTEQLALNDGNGVFTDATANITGNESADDNLLACIDHDGDGDFDIVV 336
BLAST of mRNA_C-tenellus_contig10112.1.1 vs. uniprot
Match: A0A1F3PTM3_9BACT (Por_Secre_tail domain-containing protein n=1 Tax=Bacteroidetes bacterium RIFOXYA12_FULL_38_20 TaxID=1797368 RepID=A0A1F3PTM3_9BACT) HSP 1 Score: 98.2 bits (243), Expect = 1.110e-19 Identity = 84/255 (32.94%), Postives = 119/255 (46.67%), Query Frame = 1 Query: 1 NGGGTFTSGTEFSFGAS-AEDVAVADVDGXXDMDVIVGGNIVGGIPDGYITVFKNMDGLGSFDTGVNITTPYLSFANDNCVHDFDVDGDVDLLVA---DASVLRFF*NDGTGTFSPAVSVAP----GLNIWHCDIGDINGDGEIDIMYPDSSDGAHLVWLTG-DGTGSITKPIYLAFSEITLKASFFDPILADLDNDGDSDILLNRVGLDTTEMYEKLDGKGTFSTGSSISSVRVDAPWGLYAGDVDGDTDLDLL 738 +G G F S S A+ A V AD+DG D DV+ D I ++N DG G+F + T A+ C D D DGD+D+L A D + + DG+GTF P + L+++ D++GDG++D++ D + W DG G+ + T + + ADLD DGD D+L YE LDG GTFST IS+ V A +Y+ DVDGD D+D+L Sbjct: 73 DGNGNFGSQNIISIAANGAYSVCSADLDGDGDKDVLSASRF-----DNKIAWYENTDGNGTFGDQ-KVITINADGASSVCSVDIDGDGDMDVLSASYNDNKIAWYENTDGSGTFGPQNVITTFTIQALSVYS---DDLDGDGDMDVLSASKED-HKIAWYENIDGFGTFGSQNVIT----TSLSDAYSVYSADLDGDGDKDVLSASWSGSNIGWYENLDGNGTFSTQQIISTAAVGAT-SVYSADVDGDGDMDVL 312
BLAST of mRNA_C-tenellus_contig10112.1.1 vs. uniprot
Match: UPI0004203DD1 (T9SS type A sorting domain-containing protein n=1 Tax=Aequorivita capsosiphonis TaxID=487317 RepID=UPI0004203DD1) HSP 1 Score: 97.4 bits (241), Expect = 2.210e-19 Identity = 78/230 (33.91%), Postives = 112/230 (48.70%), Query Frame = 1 Query: 61 VAVADVDGXXDMDVIVGGNIVGGIPDGYITVFKNMDGLGSFDTGVNITTPYLSFANDNCVHDFDVDGDVDLLVA---DASVLRFF*NDGTGTFSPAVSVAPGLNIWHCDIG-DINGDGEIDIMYPDSSDGAHLVWLTGDGTGSITKPIYLAFSEITLKASFFDPILADLDNDGDSDILLNRVGLDTTEMYEKLDGKGTFSTGSSISSVRVDAPWGLYAGDVDGDTDLDLL 738 + AD DG DMD++ D IT F+N DG G+F I+T LS A DFD D D+D++ A D + + DG G+FS VA H G D++ DG+ DI+ SD + DGTG+ ++ + + + ++ F AD+DNDGD D++ D YE +G G F ISSV A + +YA D+DGD D+D+L Sbjct: 509 IFAADFDGDGDMDILAASQ-----DDNKITWFENTDGAGNFGPQNIISTDALS-AKSVFACDFDGDTDMDVVSASSGDNKIAWYENTDGQGSFSAQQIVATDAMGAHSVQGFDVDNDGDNDIVSASQSDNKIAWYENLDGTGTFSEARIITTNALEARSVFG----ADIDNDGDLDVISASFNDDKIAWYENKNGLGNFGAQQVISSVADGAHY-VYAKDIDGDGDMDIL 727
BLAST of mRNA_C-tenellus_contig10112.1.1 vs. uniprot
Match: A0A2D9BEJ8_9FLAO (Por_Secre_tail domain-containing protein n=2 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A2D9BEJ8_9FLAO) HSP 1 Score: 97.1 bits (240), Expect = 2.760e-19 Identity = 80/254 (31.50%), Postives = 127/254 (50.00%), Query Frame = 1 Query: 1 NGGGTF-TSGTEFSFGASAEDVAVADVDGXXDMDVIVGGNIVGGIPDGYITVFKNMDGLGSFDTGVNITTPYLSFANDNCVHDFDVDGDVDLLVA----DASVLRFF*NDGTGTFSPAVSVAPGLNIWHC-DIGDINGDGEIDIMYPDSSDGAHLVWLTGDGTGSITKPIYLAFSEITLKASF-FDPILADLDNDGDSDILLNRVGLDTTEMYEKLDGKGTFSTGSSISSVR-VDAPWGLYAGDVDGDTDLDLL 738 +G GTF T T G +AV D+DG DMD++ P+ ++ +KNMDG G+F + ITT ++ N + + D D DGD+D+ D ++ F +G GTF V+ + H DI+ DG+ID + G+++ + DG G+ + +I SF FD + DLDNDGD DI+ D Y+ ++G+G F + + V+AP+ +++ D+DGD D D+L Sbjct: 169 DGEGTFGTEHTIIPIGPRISSIAVDDIDGDGDMDILT----TASQPEENVSWYKNMDGQGNFGSQQIITTD-VTRPNGSSIADIDGDGDMDVFATSSLIDEKIIWFENVNGQGTFGTERFVSSNVLRPHQGQSADIDNDGDIDYIC---RTGSNIGFYKNDGFGNFST-----IQQIAAVDSFIFDIEIDDLDNDGDLDIMSAFNVADKIAYYKNINGQGNFGPQQIVVEINGVNAPYTVFSTDMDGDGDQDVL 409
BLAST of mRNA_C-tenellus_contig10112.1.1 vs. uniprot
Match: A0A345H4F5_9FLAO (Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella n=1 Tax=Kordia sp. SMS9 TaxID=2282170 RepID=A0A345H4F5_9FLAO) HSP 1 Score: 96.3 bits (238), Expect = 5.500e-19 Identity = 72/227 (31.72%), Postives = 107/227 (47.14%), Query Frame = 1 Query: 73 DVDGXXDMDVIVGGNIVGGIPDGYITVFKNMDGLGSFDTGVNITTPYLSFANDNCVHDFDVDGDVDLLVA---DASVLRFF*NDGTGTFSPAVSVAPGLNIWHCDIG-DINGDGEIDIMYPDSSDGAHLVWLTGDGTGSITKPIYLAFSEITLKASFFDPILADLDNDGDSDILLNRVGLDTTEMYEKLDGKGTFSTGSSISSVRVDAPWGLYAGDVDGDTDLDLLV 741 D+DG DMD++ D + ++N DG G+F + ITT D D DGD+DLL A D + + DG G+F P + N + D++GDG++D++ SD + DG G+ + ++ + ++ + ADLD DGD D+L D YE DG+GTFS I S + P +YA DVDGD D+D+L Sbjct: 401 DLDGDGDMDIVTASEF-----DDKVAWYENTDGQGTFGSQQIITTN-ADRVRSVYASDLDGDGDLDLLSASNNDNKIAWYENTDGQGSFGPQQIITTNANGANKVFAIDLDGDGDMDVLSASGSDDKIAWYENTDGQGTFSAEQIISANADNAQSVY----PADLDGDGDMDVLSASYVDDKIAWYENTDGQGTFSA-EQIISTNITNPSSVYAADVDGDGDMDVLA 616
BLAST of mRNA_C-tenellus_contig10112.1.1 vs. uniprot
Match: UPI00156A8EF3 (T9SS type A sorting domain-containing protein n=1 Tax=Winogradskyella undariae TaxID=1285465 RepID=UPI00156A8EF3) HSP 1 Score: 94.4 bits (233), Expect = 2.520e-18 Identity = 77/240 (32.08%), Postives = 115/240 (47.92%), Query Frame = 1 Query: 52 AEDVAVADVDGXXDMDVIVGGNIVGGIPDGYITVFKNMDGLGSFDTGVNIT----TPYLSFANDNCVHDFDVDGDVDLLVA---DASVLRFF*NDGTGTFSPAVSVAPGLN-IWHCDIGDINGDGEIDIMYPDSSDGAHLVWLTG-DGTGSITKPIYLAFSEITLKASFFDPILADLDNDGDSDILLNRVGLDTTEMYEKLDGKGTFSTGSSISSVRVDAPWGLYAGDVDGDTDLDLLVS 744 A + ADV+G +D++ + D ++ F+N DG G+FD I+ P F V D D DGD D+L D VL +G G F ++ L+ ++ D++GD + D++ S + +VW DG G+ +A+ S L DLD DGD D+L + DT + YE LDG+GTF + I S VD + A D+DGD+DLDL+V+ Sbjct: 394 ASSIYPADVNGDGIVDIVATSTV-----DDKVSWFQNSDGEGNFDYQQIISMAGNAPQSVF-----VIDIDYDGDADVLSVSSIDGKVLLHKNMNGQGDFDIEYTIDVNLDSAFYITAADLDGDTDADVLVATSDYVSRIVWYENLDGQGTFGALQEIAWDADDSNQSSVS--LGDLDGDGDLDVLSSSQDNDTIDWYENLDGQGTFGS-QQIISTAVDGAESVSAADIDGDSDLDLIVT 620
BLAST of mRNA_C-tenellus_contig10112.1.1 vs. uniprot
Match: A0A2D4XK75_9FLAO (Por_Secre_tail domain-containing protein n=1 Tax=Aequorivita sp. TaxID=1872390 RepID=A0A2D4XK75_9FLAO) HSP 1 Score: 93.6 bits (231), Expect = 4.280e-18 Identity = 82/231 (35.50%), Postives = 116/231 (50.22%), Query Frame = 1 Query: 70 ADVDGXXDMDVIVGGNIVGGIPDGYITVFKNMDGLGSFDTGVNITTPYLSFANDNCVHDFDVDGDVDLLVA---DASVLRFF*NDGTGTFSPAVSVAPGLNIWH--CDIGDINGDGEIDIMYPDSSDGAHLVWLTG-DGTGSI-TKPIYLAFSEITLKASFFDPILA-DLDNDGDSDILLNRVGLDTTEMYEKLDGKGTFSTGSSISSVRVDAPWGLYAGDVDGDTDLDLL 738 AD+DG D+D I +I D I ++N+DG G+F NI ++ A D D DGD+D+L D ++ DG G+F P ++ G+ I C I DI+GDG++DI+ D + +VW DG G+ T+ + ITL A I A D+D DGD+D+L + D YE DG GTF I S D +YA D+DGD D+D+L Sbjct: 404 ADLDGDGDLDAISASSI-----DNKIAWYENLDGQGTFGIQ-NIIVVNINGAGFVRAADVDGDGDMDVLSTSRDDYNIAWHENLDGQGSFGPPQVISSGMAIGLSLCPI-DIDGDGDMDIVSSTGGD-SQIVWHENLDGQGNFGTQQL------ITLNADHPSSIYAVDVDGDGDNDVLAAALEGDMITWYENTDGLGTFGP-QQIISDETDYATSVYASDLDGDGDMDVL 619 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10112.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10112.1.1 >prot_C-tenellus_contig10112.1.1 ID=prot_C-tenellus_contig10112.1.1|Name=mRNA_C-tenellus_contig10112.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=110bp MYPDSSDGAHLVWLTGDGTGSITKPIYLAFSEITLKASFFDPILADLDNDback to top mRNA from alignment at C-tenellus_contig10112:504..1403+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10112.1.1 ID=mRNA_C-tenellus_contig10112.1.1|Name=mRNA_C-tenellus_contig10112.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=900bp|location=Sequence derived from alignment at C-tenellus_contig10112:504..1403+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10112:504..1403+ >mRNA_C-tenellus_contig10112.1.1 ID=mRNA_C-tenellus_contig10112.1.1|Name=mRNA_C-tenellus_contig10112.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=330bp|location=Sequence derived from alignment at C-tenellus_contig10112:504..1403+ (Choristocarpus tenellus KU2346)back to top |