mRNA_C-tenellus_contig10110.2.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10110.2.1 vs. uniprot
Match: D7FYW6_ECTSI (Nudix hydrolase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYW6_ECTSI) HSP 1 Score: 150 bits (380), Expect = 3.280e-40 Identity = 71/119 (59.66%), Postives = 90/119 (75.63%), Query Frame = 3 Query: 321 MLDFDVDNYNGVIVKESSFPTTTEDFVRVLQTSVEAWKDERRRGVWLKVPVGRAELITVALAEGFELHHAEKAYVMLNRWLPSSENSLPPNASHQVGIGALVLNDSKEVLVVRERRGKL 677 +L+ D Y+GV V +S P TTE+F VL+ S+EAW+ ++GVWLKVP R EL+ V++ GFELHHAEKAY+MLN WLPS+ + LP NASHQVG+GALVLN+ +VLVVRER G L Sbjct: 2 LLEHTTDIYDGVTVDGASLPATTEEFKSVLEASLEAWRSTGKKGVWLKVPADRTELVPVSIDLGFELHHAEKAYIMLNMWLPSTASQLPANASHQVGVGALVLNEDGDVLVVRERNGPL 120
BLAST of mRNA_C-tenellus_contig10110.2.1 vs. uniprot
Match: A0A7S4IEB1_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IEB1_9EUKA) HSP 1 Score: 136 bits (342), Expect = 1.020e-34 Identity = 69/157 (43.95%), Postives = 100/157 (63.69%), Query Frame = 3 Query: 273 PTRNRWSKNPPPFAATMLDFDVDNYNGVIVKESSFPTTTEDFVRVLQTSVEAWKDERRRGVWLKVPVG-RAELITVALAEGFELHHAEKAYVMLNRWLPSSENSLPPNASHQVGIGALVLNDSKEVLVVRERRGKLLARDNPLPILYTSCGGGASRG 740 P ++++SK+ A +L F VD++NG+I+ S PT E F VLQ S+E WK E+R+G+WLK+P+ AELIT A+ +GFE HH E YVM +WLP + N++P SH VG+G VLND +E+LV++E+ G P+ ++ GG A G Sbjct: 10 PPQHKFSKDTN---ADLLGF-VDDFNGIIIDSKSLPTDKEMFGIVLQASLEVWKQEKRKGIWLKIPLPTHAELITEAIGQGFECHHGESGYVMFTKWLPETPNTIPAYTSHFVGVGGFVLNDKREILVIKEKNG-------PVTSIWKVPGGTADPG 155
BLAST of mRNA_C-tenellus_contig10110.2.1 vs. uniprot
Match: E1Z7H0_CHLVA (Nudix hydrolase domain-containing protein (Fragment) n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z7H0_CHLVA) HSP 1 Score: 135 bits (339), Expect = 1.060e-34 Identity = 65/122 (53.28%), Postives = 82/122 (67.21%), Query Frame = 3 Query: 312 AATMLDFDVDNYNGVIVKESSFPTTTEDFVRVLQTSVEAWKDERRRGVWLKVPVGRAELITVALAEGFELHHAEKAYVMLNRWLPSSENSLPPNASHQVGIGALVLNDSKEVLVVRERRGKL 677 AA ++ D Y+G I E S P +F L S+ W+ + RG+WLK+P +A +I A+ GFE HHAEK YVML RWLPSSEN LPPNASHQVG+GA V+N+ +EVLVV+ER G L Sbjct: 1 AAALISGHEDAYDGFICDEQSVPAAPGEFGVALDASLAVWQQKGYRGIWLKMPAAKAHVIGHAVDRGFEFHHAEKEYVMLTRWLPSSENKLPPNASHQVGMGAFVMNERREVLVVQERSGPL 122
BLAST of mRNA_C-tenellus_contig10110.2.1 vs. uniprot
Match: A0A5J4Y3E2_9CHLO (Nudix hydrolase 2-like n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y3E2_9CHLO) HSP 1 Score: 137 bits (344), Expect = 1.970e-34 Identity = 65/125 (52.00%), Postives = 86/125 (68.80%), Query Frame = 3 Query: 303 PPFAATMLDFDVDNYNGVIVKESSFPTTTEDFVRVLQTSVEAWKDERRRGVWLKVPVGRAELITVALAEGFELHHAEKAYVMLNRWLPSSENSLPPNASHQVGIGALVLNDSKEVLVVRERRGKL 677 P A ML D Y G IV P+T+++F LQ S++ W+ ++G+W+ VP +++LI VA+ GF HHAEK YVML RWLP++E++LPPNASHQVGIGA V+N KEVLVV+ER G L Sbjct: 70 PGIGAQMLLGRADAYEGFIVSADDLPSTSDEFDSRLQQSLQDWQKSGKKGIWITVPADKSQLIPVAVQHGFTFHHAEKGYVMLTRWLPTTEDTLPPNASHQVGIGAFVVNSKKEVLVVQERFGPL 194
BLAST of mRNA_C-tenellus_contig10110.2.1 vs. uniprot
Match: A0A383VIN3_TETOB (Nudix hydrolase domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VIN3_TETOB) HSP 1 Score: 132 bits (333), Expect = 3.270e-34 Identity = 62/121 (51.24%), Postives = 86/121 (71.07%), Query Frame = 3 Query: 321 MLDFDVDNYNGVIVKESSFPTTTEDFVRVLQTSVEAWKDERRRGVWLKVPVGRAELITVALAE--GFELHHAEKAYVMLNRWLPSSENSLPPNASHQVGIGALVLNDSKEVLVVRERRGKL 677 ML+ + D Y+GVI+K S P F L +S++AW + +RG+WLKVP+ A+LI VA+ GF HHAEK YVM+ +WLP +E++LPPNASHQVG+GA+V+N +E+LVV+E G L Sbjct: 11 MLEAEEDRYDGVIIKPDSLPADPATFKAALDSSLQAWSAQGKRGIWLKVPITLAQLIPVAVEPQAGFVFHHAEKDYVMMTKWLPETESTLPPNASHQVGVGAIVVNSKQEMLVVQEANGPL 131
BLAST of mRNA_C-tenellus_contig10110.2.1 vs. uniprot
Match: A0A7J7PRR4_9CHLO (NUDIX hydrolase domain-like protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PRR4_9CHLO) HSP 1 Score: 136 bits (343), Expect = 6.570e-34 Identity = 61/119 (51.26%), Postives = 86/119 (72.27%), Query Frame = 3 Query: 321 MLDFDVDNYNGVIVKESSFPTTTEDFVRVLQTSVEAWKDERRRGVWLKVPVGRAELITVALAEGFELHHAEKAYVMLNRWLPSSENSLPPNASHQVGIGALVLNDSKEVLVVRERRGKL 677 ML+ + D Y+G+IVK S P F L+ S++AW + +RG+WL+VP+ ++LI VA+ GF HHAEK YVM+ +WLP +EN+LPPNASHQVG+GA+V+N +E+LVV+E G L Sbjct: 66 MLEAEEDRYDGIIVKPDSLPADPGTFKAALEESLQAWTKQGKRGIWLRVPIALSQLIPVAVEPGFTFHHAEKDYVMMTKWLPQTENTLPPNASHQVGVGAVVVNARQEMLVVQEANGPL 184
BLAST of mRNA_C-tenellus_contig10110.2.1 vs. uniprot
Match: A0A7R9Y4Y8_MICPS (Hypothetical protein (Fragment) n=2 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9Y4Y8_MICPS) HSP 1 Score: 133 bits (335), Expect = 5.570e-33 Identity = 71/141 (50.35%), Postives = 87/141 (61.70%), Query Frame = 3 Query: 318 TMLDFDVDNYNGVIVKESSFPTTTEDFVRVLQTSVEAWKDERRRGVWLKVPVGRAELITVALAEG-FELHHAEKAYVMLNRWLPSSENSL-PPNASHQVGIGALVLNDSKEVLVVRERRGKLLARDNP----LPILYTSCG 722 T L VD Y GVIV + P T + F L +S+ WK RGVWLK+P RAEL+ VA+ +G FE HHAEK + ML RWLP+ E+ L PPNASHQVG+GA V N + +VL+V+ERRG A P LP CG Sbjct: 68 TTLAHSVDRYGGVIVDADALPDTADAFAAALASSIARWKATGVRGVWLKIPAKRAELVGVAVHDGGFEFHHAEKTHAMLTRWLPTDEDDLLPPNASHQVGVGAFVTNGAGDVLLVQERRGPAAAASRPNFWKLPTGLVDCG 208
BLAST of mRNA_C-tenellus_contig10110.2.1 vs. uniprot
Match: UPI00053C3C31 (nudix hydrolase 8 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C3C31) HSP 1 Score: 133 bits (334), Expect = 6.250e-33 Identity = 60/109 (55.05%), Postives = 78/109 (71.56%), Query Frame = 3 Query: 339 DNYNGVIVKESSFPTTTEDFVRVLQTSVEAWKDERRRGVWLKVPVGRAELITVALAEGFELHHAEKAYVMLNRWLPSSENSLPPNASHQVGIGALVLNDSKEVLVVRER 665 D Y GV+V P+ FV VL++S+ W+ + R+GVWLK+PV R+EL+ VA+ EGFE HHAEK YVML W+P + LP NASHQVG+G V+ND KEVLVV+E+ Sbjct: 84 DEYGGVVVDPERLPSDPSTFVSVLRSSLSHWRRKERKGVWLKLPVERSELVPVAIKEGFEYHHAEKGYVMLTHWIPEGPSMLPANASHQVGVGGFVVNDHKEVLVVQEK 192
BLAST of mRNA_C-tenellus_contig10110.2.1 vs. uniprot
Match: A0A2P6TQS8_CHLSO (Nudix hydrolase 8 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TQS8_CHLSO) HSP 1 Score: 135 bits (339), Expect = 1.440e-32 Identity = 60/113 (53.10%), Postives = 80/113 (70.80%), Query Frame = 3 Query: 339 DNYNGVIVKESSFPTTTEDFVRVLQTSVEAWKDERRRGVWLKVPVGRAELITVALAEGFELHHAEKAYVMLNRWLPSSENSLPPNASHQVGIGALVLNDSKEVLVVRERRGKL 677 D Y+G+I+ + P+T E+F + S+ AW+ RG+WLK+P+ RA + A+ GFE HHAE Y+ML RWLP +EN LPPNASHQVG+GA VLN+ +EVLVV+ER G L Sbjct: 19 DAYDGLILDPEALPSTVEEFTAAMDESIPAWQAHGYRGIWLKLPLSRAHFVGHAVDRGFEFHHAETDYLMLTRWLPDTENKLPPNASHQVGVGAFVLNEQREVLVVQERNGPL 131
BLAST of mRNA_C-tenellus_contig10110.2.1 vs. uniprot
Match: A0A7I4E7E1_PHYPA (Nudix hydrolase domain-containing protein n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4E7E1_PHYPA) HSP 1 Score: 129 bits (324), Expect = 5.520e-32 Identity = 59/120 (49.17%), Postives = 78/120 (65.00%), Query Frame = 3 Query: 318 TMLDFDVDNYNGVIVKESSFPTTTEDFVRVLQTSVEAWKDERRRGVWLKVPVGRAELITVALAEGFELHHAEKAYVMLNRWLPSSENSLPPNASHQVGIGALVLNDSKEVLVVRERRGKL 677 T+L D+Y GVI+ S P+ F + L S+ WK ER+ G+WLK+P+ +L+ A+A GF HHAE AY+ML WLP +LPPNASHQVG+GA VLND E+L V+E+ G L Sbjct: 101 TILPGQYDSYEGVIIDHRSLPSDASVFKKYLIASIAQWKKERKHGIWLKLPIENVKLVEAAVAAGFGYHHAEPAYLMLTLWLPDGPCTLPPNASHQVGVGAFVLNDKNEILAVQEKNGPL 220 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10110.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10110.2.1 >prot_C-tenellus_contig10110.2.1 ID=prot_C-tenellus_contig10110.2.1|Name=mRNA_C-tenellus_contig10110.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=240bp MQLTRLYIPAVCFSLHFTCHRCAVRSFRREGPRFRRTSYPLNCLTTSRIRback to top mRNA from alignment at C-tenellus_contig10110:936..3467- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10110.2.1 ID=mRNA_C-tenellus_contig10110.2.1|Name=mRNA_C-tenellus_contig10110.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2532bp|location=Sequence derived from alignment at C-tenellus_contig10110:936..3467- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10110:936..3467- >mRNA_C-tenellus_contig10110.2.1 ID=mRNA_C-tenellus_contig10110.2.1|Name=mRNA_C-tenellus_contig10110.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=720bp|location=Sequence derived from alignment at C-tenellus_contig10110:936..3467- (Choristocarpus tenellus KU2346)back to top |