mRNA_C-tenellus_contig101.3.6 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig101.3.6
Unique NamemRNA_C-tenellus_contig101.3.6
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig101.3.6 vs. uniprot
Match: A0A383WGC4_TETOB (MFS domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WGC4_TETOB)

HSP 1 Score: 374 bits (959), Expect = 1.170e-114
Identity = 220/461 (47.72%), Postives = 284/461 (61.61%), Query Frame = 2
Query:  824 KMFTLLASASILVSYADRGNMASAIVPMGEAYGWGKGFEGEVLSAFFLGYALTQLIGGWLADQYGGRMTLMASLFAWSAFTLVTPLAASAGPAPLIAVRVGLGLGEGFAFPSVHAMIATDVPRESQSTIVGIVTAASYAGALVAFAVSPVLIHAQGWESVFYCFGGVSFLILPGWL----LYQQKGNEIAGSVM---------------STPRVPTSLTEGRHEEGDKDWKLQFVREVE-------------DLREVAKQLCARKEVWAILSAQFTQSVGMYGLLSWLPSYLHDERGLGSDSAEMAALSAAPYALQAVVGVAAGAAADALIRDQGCRVKTVRQVFQVLGMAGPAFCLAAAVS---AEQAETGVSLIVLGLGMSALTLAGVSVNHLDIAPKSAGVVFGAGNTAATMAGLLTVPLCGWILETYNSWEAVFGLFTCSYVMGCVLWLAWVGDEEI 2101
            K+ T+ A+  I++ YADR NM++AI+PM EAY W K FEG +LSAFF GYA TQ++GG LAD+YGG+  L   +F WS FT++TP AA+AG  PL+A RV LG+GEG AFPS+H+MIA +VP   +ST VGI+TAASYAG  +AF +SP LI    W+ VFY FGG + L LP WL    L Q   +  A                    +P   ++L       GD+   L   R  E             D     + L  R+EVWAI   Q+ QS GMYGLL+WLP++  D  G+     ++   +  PY LQ VVG+ AGA AD L+  +G  V++VR   Q+ GM GPA CL AAVS      AE   +LI +GLG+SALTL  VSVNHLDIAP+ AG+VFGAGNTAAT+AGL++VPL GW+L+   SW  VFGL    +V+G  +W AWVGD+ +
Sbjct:  125 KLVTV-AAIGIVICYADRSNMSTAILPMAEAYHWDKAFEGVILSAFFAGYAATQVLGGSLADRYGGKFVLTTGVFLWSLFTVLTPGAAAAGTVPLLAARVLLGVGEGVAFPSIHSMIARNVPTSKRSTAVGIITAASYAGTALAFGLSPWLISRFSWQWVFYLFGGSALLWLPFWLPLNVLKQLPEDATAAXXXXXXXXXXXXXXXXGKDSPMSQSALG------GDEGAPLLQRRSFEVATAGTPAAAAAADGSTGFQALMKRREVWAICCCQYAQSYGMYGLLTWLPTFFTDFYGV--KLVDLGGYTLLPYLLQGVVGLGAGALADQLLSSRGWSVRSVRVGLQLAGMLGPAACLMAAVSPIVGGSAEAASALITVGLGLSALTLGAVSVNHLDIAPRHAGMVFGAGNTAATLAGLVSVPLTGWVLQRTGSWPIVFGLIGVHFVVGSAIWAAWVGDKPL 576          
BLAST of mRNA_C-tenellus_contig101.3.6 vs. uniprot
Match: A0A2K3CVG1_CHLRE (MFS domain-containing protein n=2 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3CVG1_CHLRE)

HSP 1 Score: 364 bits (934), Expect = 3.530e-111
Identity = 204/440 (46.36%), Postives = 275/440 (62.50%), Query Frame = 2
Query:  839 LASASILVSYADRGNMASAIVPMGEAYGWGKGFEGEVLSAFFLGYALTQLIGGWLADQYGGRMTLMASLFAWSAFTLVTPLAASAGPAPLIAVRVGLGLGEGFAFPSVHAMIATDVPRESQSTIVGIVTAASYAGALVAFAVSPVLIHAQGWESVFYCFGGVSFLILPGWLLY----------------QQKGNEIAGSVMSTPRVPTSLTEGRHEEGDKDWKLQFVREVEDLREVAKQLCARKEVWAILSAQFTQSVGMYGLLSWLPSYLHDERGLGSDSAEMAALSAAPYALQAVVGVAAGAAADALIRDQGCRVKTVRQVFQVLGMAGPAFCLAAAVS---AEQAETGVSLIVLGLGMSALTLAGVSVNHLDIAPKSAGVVFGAGNTAATMAGLLTVPLCGWILETYNSWEAVFGLFTCSYVMGCVLWLAWVGDEEI 2101
            L +  I++ YADR N+++A++PM + +GW K ++G VLS FF GYA TQ++GG LADQ+GG+M L A +  WS FT  TP AA+AG  PL+  RV LG+GEG AFPS+H++I+ +VP  +++T VGIVTAASYAG  +AF VSP +I   GWE VFY F G++ L LP WL                   +   E + S    P   T  T G             V  V+        L  R+EVWAI  AQ+ QS GMYGLL+WLP++  +   +  + A++ + +  PY  Q V+G A G  AD ++R+ G +V TVR+  QV+GM GPA CL  AVS      A    +LI LGLG SALTL GVS +HLDIAP++AG+VFGAGNTAAT+AGL++VP+ G++L+T  SW  VFG+    YV G +LW AW GD+++
Sbjct:  139 LCTLGIVICYADRSNISTAVLPMAQQFGWDKAYQGVVLSVFFGGYATTQVLGGKLADQFGGKMVLAAGVALWSVFTFATPAAAAAGTLPLLVARVMLGVGEGVAFPSIHSLISRNVPAGNRTTAVGIVTAASYAGTALAFGVSPWIISNFGWEMVFYSFAGLALLWLPFWLPVVTLDKFRSQPSSPISSMESDIEASASTAVAPTASTGATNGSSSTS--------VAPVDSWA-----LLKRREVWAICGAQYAQSWGMYGLLNWLPTFFSEFYQV--ELADLGSYTLLPYVFQGVLGAATGFLADWMLRN-GWQVGTVRKALQVVGMLGPAACLCLAVSPLVGASASVASNLITLGLGFSALTLGGVSASHLDIAPRNAGLVFGAGNTAATLAGLVSVPVTGYLLQTTGSWPLVFGITAFHYVAGALLWAAWAGDKQL 562          
BLAST of mRNA_C-tenellus_contig101.3.6 vs. uniprot
Match: A0A8J4B4K4_9CHLO (MFS domain-containing protein n=3 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4B4K4_9CHLO)

HSP 1 Score: 363 bits (933), Expect = 4.140e-111
Identity = 204/426 (47.89%), Postives = 272/426 (63.85%), Query Frame = 2
Query:  839 LASASILVSYADRGNMASAIVPMGEAYGWGKGFEGEVLSAFFLGYALTQLIGGWLADQYGGRMTLMASLFAWSAFTLVTPLAASAGPAPLIAVRVGLGLGEGFAFPSVHAMIATDVPRESQSTIVGIVTAASYAGALVAFAVSPVLIHAQGWESVFYCFGGVSFLILPGWLLYQQKGNEIAGSVMSTPRVPTSLTEGRHEEGD--KDWKLQFVREVEDLREVAKQLCARKEVWAILSAQFTQSVGMYGLLSWLPSYLHDERGLGSDSAEMAALSAAPYALQAVVGVAAGAAADALIRDQGCRVKTVRQVFQVLGMAGPAFCLAAAVS---AEQAETGVSLIVLGLGMSALTLAGVSVNHLDIAPKSAGVVFGAGNTAATMAGLLTVPLCGWILETYNSWEAVFGLFTCSYVMGCVLWLAWVGDEEI 2101
            L +  +++ YADR NM++A++PM + +GW K ++G VLS FF GYA TQ++GG LADQYGG+M L A +  WS FT  TP AA+AG  PL+  RV LG+GEG AFPS+H++IA +VP ++Q+T VGIVTAASYAG  +AF +SP++I   GWE VFY F G++ L LP WL  Q   ++    V + P             GD  + W L        LR        R+EVWAI + Q+ QS GMYGLL+WLP++  D   +    +++ + +  PY  Q  +G A G  AD LIR  G RV TVR++ QV+GM GPA CL  AVS      A     LI LGLG SALTL GVS +HLD+AP++AG+VFGAGNTAAT+AGL++VP+ G++L+T  SW  VFG+    YV G ++W  W GD  +
Sbjct:  154 LCTLGVVICYADRSNMSTAVLPMAQQFGWDKAYQGVVLSVFFGGYATTQILGGKLADQYGGKMVLAAGVALWSLFTYATPAAAAAGTLPLLLSRVMLGVGEGVAFPSIHSLIARNVPVQNQTTAVGIVTAASYAGTALAFGISPLIISNFGWEWVFYSFAGLALLWLPLWLPIQTV-DKFQPQVAAQPAAAAGEAAEIAVSGDGSRPWAL--------LR--------RREVWAICATQYAQSWGMYGLLNWLPTFFSDFYHV--QLSDLGSYTLLPYVFQGGLGAATGFLADYLIRS-GWRVGTVRKILQVVGMLGPAACLCLAVSPLVGASASLASGLITLGLGFSALTLGGVSASHLDVAPRNAGLVFGAGNTAATLAGLVSVPVTGYLLQTTGSWPLVFGITAFHYVAGALIWSLWSGDRAL 559          
BLAST of mRNA_C-tenellus_contig101.3.6 vs. uniprot
Match: A0A835Y0L3_9CHLO (MFS domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835Y0L3_9CHLO)

HSP 1 Score: 360 bits (923), Expect = 6.380e-111
Identity = 201/424 (47.41%), Postives = 270/424 (63.68%), Query Frame = 2
Query:  839 LASASILVSYADRGNMASAIVPMGEAYGWGKGFEGEVLSAFFLGYALTQLIGGWLADQYGGRMTLMASLFAWSAFTLVTPLAASAGPAPLIAVRVGLGLGEGFAFPSVHAMIATDVPRESQSTIVGIVTAASYAGALVAFAVSPVLIHAQGWESVFYCFGGVSFLILPGWLLYQQKGNEIAGSVMSTPRVPTSLTEGRHEEGDKDWKLQFVREVEDLREVAKQLCARKEVWAILSAQFTQSVGMYGLLSWLPSYLHDERGLGSDSAEMAALSAAPYALQAVVGVAAGAAADALIRDQGCRVKTVRQVFQVLGMAGPAFCLAAAVS---AEQAETGVSLIVLGLGMSALTLAGVSVNHLDIAPKSAGVVFGAGNTAATMAGLLTVPLCGWILETYNSWEAVFGLFTCSYVMGCVLWLAWVGDEEI 2101
            L + SI++ YADR N+++AI+PM + +GW K ++G VLS FF GYA TQ++GG LADQ+GG++ L   +  WS  T  TP AA+AG  PL   R+ LG+GEG AFPS+H++I+ +VP  +QST VGIVTAASY G  +AF VSPV+I   GWE +FY F  ++ L LP WL       +      S+            +E   +       +     E A  L  RKEVWAI +AQ+ QS GMYGLL+WLP++  +   +  + A++ + +  PY  Q V+G A G AAD L+R+ G +V TVR+V QV+GM GPA CL  AVS      A    +LI LGLG SALTL GVS +HLDIAP++AG+VFGAGNTAAT+AGL++VP+ G+IL++  SW  VFG+    YV G V+W  W GD  +
Sbjct:   44 LCTLSIVICYADRSNISTAILPMAQQFGWDKAYQGIVLSMFFGGYATTQILGGRLADQFGGKVVLATGVALWSVVTFGTPAAAAAGTLPLFVARILLGVGEGVAFPSIHSLISRNVPPRNQSTAVGIVTAASYVGTALAFGVSPVIISNLGWEWIFYSFAALALLWLPLWLPVSTLDGDKFFRPSSSSXXXXXXXXLASQESAMEAGAAGAAKEGAAEEPAWALLKRKEVWAICAAQYAQSWGMYGLLNWLPTFFSEFYKV--EVADLGSYTLWPYVFQGVLGAATGVAADYLLRN-GWKVGTVRKVLQVVGMLGPAACLCLAVSPLVGASAGLASNLITLGLGFSALTLGGVSASHLDIAPRNAGMVFGAGNTAATLAGLISVPVTGFILQSTGSWPLVFGITAFHYVAGAVVWALWCGDRPL 464          
BLAST of mRNA_C-tenellus_contig101.3.6 vs. uniprot
Match: D8TSZ4_VOLCA (MFS domain-containing protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TSZ4_VOLCA)

HSP 1 Score: 359 bits (921), Expect = 1.660e-110
Identity = 202/428 (47.20%), Postives = 267/428 (62.38%), Query Frame = 2
Query:  839 LASASILVSYADRGNMASAIVPMGEAYGWGKGFEGEVLSAFFLGYALTQLIGGWLADQYGGRMTLMASLFAWSAFTLVTPLAASAGPAPLIAVRVGLGLGEGFAFPSVHAMIATDVPRESQSTIVGIVTAASYAGALVAFAVSPVLIHAQGWESVFYCFGGVSFLILPGWL----LYQQKGNEIAGSVMSTPRVPTSLTEGRHEEGDKDWKLQFVREVEDLREVAKQLCARKEVWAILSAQFTQSVGMYGLLSWLPSYLHDERGLGSDSAEMAALSAAPYALQAVVGVAAGAAADALIRDQGCRVKTVRQVFQVLGMAGPAFCLAAAVS---AEQAETGVSLIVLGLGMSALTLAGVSVNHLDIAPKSAGVVFGAGNTAATMAGLLTVPLCGWILETYNSWEAVFGLFTCSYVMGCVLWLAWVGDEEI 2101
            L +  +++ YADR N+++A++PM + +GW K ++G VLS FF GYA TQ++GG LADQYGG+M L A +  WS FT  TP AA+AG  PL+  RV LG+GEG AFPS+H++IA +VP  SQ+T VGIVTAASYAG  +AF +SP++I   GWE VFY F G++ L LP WL    L + K  E A     T                                    L  R+EVWAI +AQ+TQS GMYGLL+WLP++  +   +    A++ + +  PY  Q  +G A G  AD LIR  G +V TVR++ QV GM GPA CL  AVS      A    +LI +GLG SALTL GVS +HLD+AP++AG+VFGAGNTAAT+AGL++VP+ G++L+T  SW  VFG+    YV G V W  W GD+ +
Sbjct:   46 LCTLGVVICYADRSNISTAVLPMAQQFGWDKAYQGVVLSVFFGGYATTQILGGKLADQYGGKMVLAAGVALWSLFTYATPAAAAAGTLPLLVARVMLGVGEGVAFPSIHSLIARNVPVRSQTTAVGIVTAASYAGTALAFGISPLIISKFGWEWVFYAFAGLALLWLPLWLPVKTLDKFKKPETALQAADTSAAVXXXXXXXXXXXXXXXXXXXXXN-------PWALLRRREVWAICAAQYTQSWGMYGLLNWLPTFFSEFYHV--QLADLGSYTLLPYVFQGGLGAATGFLADYLIRS-GWQVGTVRKILQVAGMLGPAACLCLAVSPVVGASASLASALITVGLGFSALTLGGVSASHLDVAPRNAGLVFGAGNTAATLAGLVSVPVTGYVLQTTGSWPLVFGITALHYVAGAVAWTIWSGDKPL 463          
BLAST of mRNA_C-tenellus_contig101.3.6 vs. uniprot
Match: A0A250XA39_9CHLO (MFS domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XA39_9CHLO)

HSP 1 Score: 361 bits (926), Expect = 4.110e-110
Identity = 204/435 (46.90%), Postives = 271/435 (62.30%), Query Frame = 2
Query:  839 LASASILVSYADRGNMASAIVPMGEAYGWGKGFEGEVLSAFFLGYALTQLIGGWLADQYGGRMTLMASLFAWSAFTLVTPLAASAGPAPLIAVRVGLGLGEGFAFPSVHAMIATDVPRESQSTIVGIVTAASYAGALVAFAVSPVLIHAQGWESVFYCFGGVSFLILPGWLLYQ---------QKGNEIAGSVMSTPRVPTSLTEGRHEEGDKDWKLQFVREVE--DLREVAKQLCARKEVWAILSAQFTQSVGMYGLLSWLPSYLHDERGLGSDSAEMAALSAAPYALQAVVGVAAGAAADALIRDQGCRVKTVRQVFQVLGMAGPAFCLAAAVS---AEQAETGVSLIVLGLGMSALTLAGVSVNHLDIAPKSAGVVFGAGNTAATMAGLLTVPLCGWILETYNSWEAVFGLFTCSYVMGCVLWLAWVGDEEI 2101
            L + S+++ YADR N+++AI+PM EA+GW KGF+G VLS+FFLGYALTQ++GG LAD++GG++ L   +  WS FT + P AA+AG APL+  RV LG+GEG AFPS+H +IA +VP  SQS+ VG+VTAASY G  +AF +SP +I+  GW  VFY F   + L LP WL  Q         +K ++         R  +S+       G    K Q  +      L      L  R+EVWAI  AQ+TQS G YGLL+WLP++  D  G+    A++   +  PY +Q  +GV +G  AD LI   G  V+ VR   QV+GM GPA CL  AVS           SLI +GLG+SAL+L GVSV+HLDIAPK AGV+FGAGNTAAT AG ++VP+ G++L+   SW  VFG+    Y++G V W  WVGD  +
Sbjct:  123 LCALSVVICYADRSNISTAILPMSEAFGWDKGFQGVVLSSFFLGYALTQILGGQLADRFGGKLVLAGGVSIWSLFTFMLPAAAAAGIAPLLVARVFLGVGEGVAFPSIHTLIARNVPYASQSSAVGVVTAASYVGTAIAFGISPYIINMYGWPWVFYLFSASALLWLPLWLPIQTRRPPAPLVRKPSDREEGFDVADRSTSSMGASSSSSGVPLLKPQLPKPKNPVSLGPAFWALMRRREVWAICIAQYTQSWGFYGLLNWLPTFFSDYYGV--QLADLGGYTLLPYVVQGGLGVVSGLLADRLI-SSGWSVRGVRVALQVIGMLGPAACLVLAVSPIVGGSPSIASSLITVGLGLSALSLGGVSVSHLDIAPKHAGVIFGAGNTAATAAGFISVPVTGYLLQMTGSWPLVFGITVLHYLVGAVFWTMWVGDSVL 554          
BLAST of mRNA_C-tenellus_contig101.3.6 vs. uniprot
Match: L1IQR4_GUITC (MFS domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IQR4_GUITC)

HSP 1 Score: 355 bits (910), Expect = 1.360e-109
Identity = 190/442 (42.99%), Postives = 281/442 (63.57%), Query Frame = 2
Query:  791 IKDMDGESNRRK--MFTLLASASILVSYADRGNMASAIVPMGEAYGWGKGFEGEVLSAFFLGYALTQLIGGWLADQYGGRMTLMASLFAWSAFTLVTPLAASAGPAPLIAVRVGLGLGEGFAFPSVHAMIATDVPRESQSTIVGIVTAASYAGALVAFAVSPVLIHAQGWESVFYCFGGVSFLILPGWLLYQQKGNEIAGSVMSTPRVPTSLTEGRHEEGDKDWKLQFVREVEDLREVAKQLCARKEVWAILSAQFTQSVGMYGLLSWLPSYLHDERGLGSDSAEMAALSAAPYALQAVVGVAAGAAADALIRDQGCRVKTVRQVFQVLGMAGPAF--CLAAAVSAEQAETGVSLIVLG-LGMSALTLAGVSVNHLDIAPKSAGVVFGAGNTAATMAGLLTVPLCGWILETYNSWEAVFGLFTCSYVMGCVLWLAWVGDEEI 2101
            +K+   E+ R K  +F +L S +I + YADR N+A AI+PM    G+ +  EG VLS+FF+GYA TQ+ GGWL+D++GG+  L  ++F WS  T+ TP+ A +G   LI +R+ +G+GEG AFP++H+MI+  +P E ++T+V IVTAASY G+L+AFAV P ++ +  W+SVFY FG +  + LP W LY +    +  S ++   V  +   G +                 + E+ + L  +KEVWAI+ AQ+TQS G+YG+++WLP+Y+++E  +  +  ++A  +  PY LQ  VG+ +G  AD+LI  +G RVK VRQ  Q +GM GP    C AA   + Q +   +L + G LG+SALTL GVS NHLDIA K++G+VFG GNTA T+ G ++V LCGW+ E  +SW  V  +    Y +G + W+AWVGDEE+
Sbjct:    3 VKERADETIRLKNSLFVVLTSLAISICYADRANIADAILPMSAELGFARSVEGIVLSSFFIGYASTQIAGGWLSDKFGGKNVLSVAVFLWSVATVFTPVFARSGLYNLILIRILMGVGEGPAFPAIHSMISRTIPNERKTTVVAIVTAASYVGSLLAFAVCPAIMASSSWDSVFYSFGSLGLVWLPLWFLYTRFFPSLDKSTVAITDVSGNTAPGNN-----------------VLELTRSLLFKKEVWAIIVAQYTQSWGLYGVMNWLPAYINEEFHVKVE--DLAGFTVLPYLLQGGVGLVSGVIADSLI-SKGIRVKVVRQAMQGIGMLGPGLLLCFAAGSHSAQVQQEATLFLAGGLGLSALTLGGVSANHLDIAKKNSGLVFGIGNTAGTLGGFVSVALCGWLQEITHSWPTVLTVIAAHYAVGALAWVAWVGDEEV 424          
BLAST of mRNA_C-tenellus_contig101.3.6 vs. uniprot
Match: A0A7S0WX97_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0WX97_9CHLO)

HSP 1 Score: 359 bits (921), Expect = 2.870e-109
Identity = 199/425 (46.82%), Postives = 264/425 (62.12%), Query Frame = 2
Query:  839 LASASILVSYADRGNMASAIVPMGEAYGWGKGFEGEVLSAFFLGYALTQLIGGWLADQYGGRMTLMASLFAWSAFTLVTPLAASAGPAPLIAVRVGLGLGEGFAFPSVHAMIATDVPRESQSTIVGIVTAASYAGALVAFAVSPVLIHAQGWESVFYCFGGVSFLILPGWLLYQQKGNEIAGSVMSTPRVPTSLTEGRHEEGDKDWKLQFVREVEDLREVAKQLCARKEVWAILSAQFTQSVGMYGLLSWLPSYLHDERGLGSDSAEMAALSAAPYALQAVVGVAAGAAADALIRDQGCRVKTVRQVFQVLGMAGPAFCLAAAVS----AEQAETGVSLIVLGLGMSALTLAGVSVNHLDIAPKSAGVVFGAGNTAATMAGLLTVPLCGWILETYNSWEAVFGLFTCSYVMGCVLWLAWVGDEEI 2101
            + + S+++ YADR N+++A++PM + +GW K ++G VLS FF GYALTQ++GG LAD+YGG++ LM  +  WSAFT +TP AA+AG  PL+A RV LG+GEG AFPS+H++IA +VP   QST VG+VTAASY G  +AF VSP++I   GW  VFY F   + L LP WL  +      A    S                                     L  R+EVWAI +AQ+ QS GMYGLL+WLP++  D   +  + +++A+ +  PY +Q  VG+ +G  AD +I   G  V+  R + QV+GM GPA CL  AVS    A Q      LI LGLG SALTL GVS +HLD+AP  AGV+FGAGNTAAT+AGLL+VPL G++L+T  SW  VFG+    YV+G  LW AWVGD  +
Sbjct:  145 MCTLSVVICYADRSNISTAVLPMAQEFGWDKAYQGIVLSTFFSGYALTQVVGGGLADRYGGKLVLMGGVALWSAFTAMTPGAAAAGSFPLLAARVLLGVGEGVAFPSIHSLIARNVPPAWQSTAVGVVTAASYVGTALAFGVSPLIISTLGWPWVFYLFAAAALLWLPLWLPVRSSSAPAAKRRNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTGFWALLKRREVWAICAAQYCQSWGMYGLLNWLPTFFSDYYHV--EISDLASYTLLPYVVQGGVGLLSGVLADRMITS-GWGVRRTRTLLQVVGMLGPAACLLLAVSPAVGASQPALASQLITLGLGFSALTLGGVSASHLDVAPMHAGVIFGAGNTAATLAGLLSVPLTGYLLQTTGSWPLVFGITAVHYVVGAALWAAWVGDSRL 566          
BLAST of mRNA_C-tenellus_contig101.3.6 vs. uniprot
Match: A0A835WWZ7_9CHLO (MFS domain-containing protein n=2 Tax=Chlamydomonas TaxID=3052 RepID=A0A835WWZ7_9CHLO)

HSP 1 Score: 355 bits (910), Expect = 8.390e-109
Identity = 203/444 (45.72%), Postives = 268/444 (60.36%), Query Frame = 2
Query:  839 LASASILVSYADRGNMASAIVPMGEAYGWGKGFEGEVLSAFFLGYALTQLIGGWLADQYGGRMTLMASLFAWSAFTLVTPLAASAGPAPLIAVRVGLGLGEGFAFPSVHAMIATDVPRESQSTIVGIVTAASYAGALVAFAVSPVLIHAQGWESVFYCFGGVSFLILPGWLLYQQKGNEIAGSVMSTPRVPTSLTEGRHEEGDKDWKLQFVREVEDLREVAKQ--------------------LCARKEVWAILSAQFTQSVGMYGLLSWLPSYLHDERGLGSDSAEMAALSAAPYALQAVVGVAAGAAADALIRDQGCRVKTVRQVFQVLGMAGPAFCLAAAVS---AEQAETGVSLIVLGLGMSALTLAGVSVNHLDIAPKSAGVVFGAGNTAATMAGLLTVPLCGWILETYNSWEAVFGLFTCSYVMGCVLWLAWVGDEEI 2101
            L +  I++ YADR N+++A++PM + +GW K ++G VLS FF GYA TQ++GG LADQ+GG+M L A +  WS FT  TP AA+AG  PL+  RV LG+GEG AFPS+H++I+ +VP  +++T VGIVTAASYAG  +AF VSP +I   GWE VFY F G++ L LP WL              S P  P +  E   E                                           L  R+EVWAI  AQ+ QS GMYGLL+WLP++  +   +  + A++ + +  PY  Q  +G A G  AD L+R +G RV TVR+  QV+GM GPA CL  AVS      A    +LI LGLG SALTL GVS +HLDIAP++AG+VFGAGNTAAT+AGL++VP+ G++L+T  SW  VFG+    YV G VLW AW GD ++
Sbjct:   39 LCTLGIVICYADRSNISTAVLPMAQQFGWDKAYQGVVLSVFFGGYATTQVLGGKLADQFGGKMVLAAGVALWSVFTFATPAAAAAGTLPLLVARVMLGVGEGVAFPSIHSLISRNVPAGNRTTAVGIVTAASYAGTALAFGVSPWIISNFGWEMVFYSFAGLAVLWLPFWLPVVTLDK-----FRSAPSSPVASMESDTEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASTTDSWALLKRREVWAICGAQYAQSWGMYGLLNWLPTFFSEFYKV--ELADLGSYTLLPYVFQGGLGAATGFLADWLLR-KGWRVGTVRKALQVVGMLGPAACLCLAVSPLVGASASVASNLITLGLGFSALTLGGVSASHLDIAPRNAGLVFGAGNTAATLAGLVSVPVTGYLLQTTGSWPLVFGITAFHYVAGAVLWAAWAGDRQL 474          
BLAST of mRNA_C-tenellus_contig101.3.6 vs. uniprot
Match: A0A7S0I7L5_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0I7L5_MICPS)

HSP 1 Score: 354 bits (909), Expect = 3.720e-108
Identity = 211/446 (47.31%), Postives = 265/446 (59.42%), Query Frame = 2
Query:  803 DGESNRRKMFTLLASASILVSYADRGNMASAIVPMGEAYGWGKGFEGEVLSAFFLGYALTQLIGGWLADQYGGRMTLMASLFAWSAFTLVTPLAASAGPAPLIAVRVGLGLGEGFAFPSVHAMIATDVPRESQSTIVGIVTAASYAGALVAFAVSPVLIHAQGWESVFYCFGGVSFLILPGWLLYQQKGNEIAGSVMSTPRVPTSLTEGRHEEGDKDWKLQFVREVEDLREVAKQLCARKEVWAILSAQFTQSVGMYGLLSWLPSYLHDERGLGSDSAEMAALSAAPYALQAVVGVAAGAAADALIRDQGCRVKTVRQVFQVLGMAGPAFCLAAAV-----SAEQAETGVS--LIVLGLGMSALTLAGVSVNHLDIAPKSAGVVFGAGNTAATMAGLLTVPLCGWILE-TYNSWEAVFGLFTCSYVMGCVLWLAWVGDEEIE*TSL 2116
            DGE N     TLLA+ +I V YADR N+++AI+PM + +GW K   G +LSAFF GYALTQL+GG LAD +GG+  L   +  WS  T VTPLAA+AG  PL+A RV LG GEG AFP+VH++I+  VP++ QST V  VTAASY GA  AF V+P ++ A GWE+ FY FG  +    P W     K    AG            T      G  D  L  V+               KEV AI  AQF QS G YGLLSWLP+Y   E  LG    ++ A +  PY +Q +VGV +G  AD  +R+     K +R+ FQ +GM GPA CLA A       A  A    +  L+ +GL +SALTLAGVSV+HLD+AP+ AG+VF  GNT AT+AG++ VPL GW+LE T  SW AVFG+    YV+G  LW AWVGDE +   SL
Sbjct:  108 DGE-NDWLTLTLLAAVAIFVCYADRSNISTAIIPMAKDFGWDKIQTGGMLSAFFYGYALTQLVGGRLADSFGGKRVLALGVLGWSLATFVTPLAAAAGAIPLVAARVTLGAGEGVAFPAVHSLISRHVPKDRQSTAVAAVTAASYGGAAFAFGVTPAVVLAGGWEAAFYTFGSAAIFWFPFWAASSFKVVNDAGGGGKYGAESAGKT------GVIDEWLALVK--------------TKEVRAICVAQFAQSWGGYGLLSWLPTYF--EEALGIPLGDLPAFTVLPYFIQGIVGVGSGVVADQWLREGKFSTKFIRRAFQTVGMVGPAVCLAGAAFLGGAGATDANVFAAAVLVDVGLALSALTLAGVSVSHLDVAPRHAGLVFATGNTCATIAGIIAVPLSGWVLEATGQSWSAVFGVIAVLYVVGAALWWAWVGDEPVPEDSL 530          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig101.3.6 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A383WGC4_TETOB1.170e-11447.72MFS domain-containing protein n=1 Tax=Tetradesmus ... [more]
A0A2K3CVG1_CHLRE3.530e-11146.36MFS domain-containing protein n=2 Tax=Chlamydomona... [more]
A0A8J4B4K4_9CHLO4.140e-11147.89MFS domain-containing protein n=3 Tax=Volvox afric... [more]
A0A835Y0L3_9CHLO6.380e-11147.41MFS domain-containing protein n=1 Tax=Edaphochlamy... [more]
D8TSZ4_VOLCA1.660e-11047.20MFS domain-containing protein n=1 Tax=Volvox carte... [more]
A0A250XA39_9CHLO4.110e-11046.90MFS domain-containing protein n=1 Tax=Chlamydomona... [more]
L1IQR4_GUITC1.360e-10942.99MFS domain-containing protein n=1 Tax=Guillardia t... [more]
A0A7S0WX97_9CHLO2.870e-10946.82Hypothetical protein (Fragment) n=1 Tax=Chlamydomo... [more]
A0A835WWZ7_9CHLO8.390e-10945.72MFS domain-containing protein n=2 Tax=Chlamydomona... [more]
A0A7S0I7L5_MICPS3.720e-10847.31Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig101contigC-tenellus_contig101:17649..25900 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog3067.XP_002949545.1
PFAMsMFS_1
Model size2877
Max annot lvl3041|Chlorophyta
KEGG koko:K08193
KEGG TC2.A.1.14
Hectar predicted targeting categorysignal peptide
Exons12
Evalue1.99e-117
EggNOG OGsKOG2532@1|root,KOG2532@2759|Eukaryota,37TI6@33090|Viridiplantae,34GP1@3041|Chlorophyta
DescriptionMajor Facilitator Superfamily
Cds size1308
COG categoryG
BRITEko00000,ko02000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789114.7317345-UTR-C-tenellus_contig101:17648..184181680789114.7317345-UTR-C-tenellus_contig101:17648..18418Choristocarpus tenellus KU2346UTRC-tenellus_contig101 17649..18418 -
1680789114.8485346-UTR-C-tenellus_contig101:24488..246911680789114.8485346-UTR-C-tenellus_contig101:24488..24691Choristocarpus tenellus KU2346UTRC-tenellus_contig101 24489..24691 -
1680789114.858833-UTR-C-tenellus_contig101:24871..249591680789114.858833-UTR-C-tenellus_contig101:24871..24959Choristocarpus tenellus KU2346UTRC-tenellus_contig101 24872..24959 -
1680789114.8684385-UTR-C-tenellus_contig101:25392..259001680789114.8684385-UTR-C-tenellus_contig101:25392..25900Choristocarpus tenellus KU2346UTRC-tenellus_contig101 25393..25900 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789114.7459898-CDS-C-tenellus_contig101:18418..185481680789114.7459898-CDS-C-tenellus_contig101:18418..18548Choristocarpus tenellus KU2346CDSC-tenellus_contig101 18419..18548 -
1680789114.7550013-CDS-C-tenellus_contig101:19006..190791680789114.7550013-CDS-C-tenellus_contig101:19006..19079Choristocarpus tenellus KU2346CDSC-tenellus_contig101 19007..19079 -
1680789114.7667518-CDS-C-tenellus_contig101:19568..196391680789114.7667518-CDS-C-tenellus_contig101:19568..19639Choristocarpus tenellus KU2346CDSC-tenellus_contig101 19569..19639 -
1680789114.7764466-CDS-C-tenellus_contig101:20270..204281680789114.7764466-CDS-C-tenellus_contig101:20270..20428Choristocarpus tenellus KU2346CDSC-tenellus_contig101 20271..20428 -
1680789114.7872539-CDS-C-tenellus_contig101:20778..209281680789114.7872539-CDS-C-tenellus_contig101:20778..20928Choristocarpus tenellus KU2346CDSC-tenellus_contig101 20779..20928 -
1680789114.796341-CDS-C-tenellus_contig101:21628..217801680789114.796341-CDS-C-tenellus_contig101:21628..21780Choristocarpus tenellus KU2346CDSC-tenellus_contig101 21629..21780 -
1680789114.8072493-CDS-C-tenellus_contig101:22283..224461680789114.8072493-CDS-C-tenellus_contig101:22283..22446Choristocarpus tenellus KU2346CDSC-tenellus_contig101 22284..22446 -
1680789114.81657-CDS-C-tenellus_contig101:23071..231621680789114.81657-CDS-C-tenellus_contig101:23071..23162Choristocarpus tenellus KU2346CDSC-tenellus_contig101 23072..23162 -
1680789114.8265631-CDS-C-tenellus_contig101:23787..239211680789114.8265631-CDS-C-tenellus_contig101:23787..23921Choristocarpus tenellus KU2346CDSC-tenellus_contig101 23788..23921 -
1680789114.8373194-CDS-C-tenellus_contig101:24302..244881680789114.8373194-CDS-C-tenellus_contig101:24302..24488Choristocarpus tenellus KU2346CDSC-tenellus_contig101 24303..24488 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig101.3.6prot_C-tenellus_contig101.3.6Choristocarpus tenellus KU2346polypeptideC-tenellus_contig101 18419..24488 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig101.3.6

>prot_C-tenellus_contig101.3.6 ID=prot_C-tenellus_contig101.3.6|Name=mRNA_C-tenellus_contig101.3.6|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=436bp
MDGESNRRKMFTLLASASILVSYADRGNMASAIVPMGEAYGWGKGFEGEV
LSAFFLGYALTQLIGGWLADQYGGRMTLMASLFAWSAFTLVTPLAASAGP
APLIAVRVGLGLGEGFAFPSVHAMIATDVPRESQSTIVGIVTAASYAGAL
VAFAVSPVLIHAQGWESVFYCFGGVSFLILPGWLLYQQKGNEIAGSVMST
PRVPTSLTEGRHEEGDKDWKLQFVREVEDLREVAKQLCARKEVWAILSAQ
FTQSVGMYGLLSWLPSYLHDERGLGSDSAEMAALSAAPYALQAVVGVAAG
AAADALIRDQGCRVKTVRQVFQVLGMAGPAFCLAAAVSAEQAETGVSLIV
LGLGMSALTLAGVSVNHLDIAPKSAGVVFGAGNTAATMAGLLTVPLCGWI
LETYNSWEAVFGLFTCSYVMGCVLWLAWVGDEEIE*
back to top

mRNA from alignment at C-tenellus_contig101:17649..25900-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig101.3.6 ID=mRNA_C-tenellus_contig101.3.6|Name=mRNA_C-tenellus_contig101.3.6|organism=Choristocarpus tenellus KU2346|type=mRNA|length=8252bp|location=Sequence derived from alignment at C-tenellus_contig101:17649..25900- (Choristocarpus tenellus KU2346)
TCCTAGCTGATCTCCCTCTCGCCTTCTTGGGGTACACATTCCTCACCCTC TTGAATTGTCCCTGTGTTTGCTGACTTCGGGTGTTTGAGGGGAGGGAGGG GTGGGTAGGAGGTATGACTTGACAGCCACCTAGAAGAAGGAAATGTTGGC CAGCGAAGGGTCTGATTGGTGGATATACATGAAGGAAAAAAATATGGACA ATGTTGGTATTGCATTTAGGGCAGGAGGGGTGACGGTTGTTGACAGTGAC TACAATAGGATTTTTCTGTGGGGTAGGGTGGTAGGGTGTTGGGGTGGCCC AGGTGAAATGGCGGTGGTGGTTGGTAGGGTGGCGGGTAGGTTTTGTGGGA TTAGCTGCAGAGAGGGTCGTGGTGGCTGTAGGGTGCGGTGGTTTTAGGGT TAATGGCATGTGCCGAGTGTTAAGTCTGTGAGGTGTAGGTTGTGTTGCAA CTTGAGGGCGTGGGGTGAGTGGCAGCAGGTAGAAGGAAGGAAGACGGATG TCACCCAGGCGAGGCTAGGAACCTAAGGAGGGTAGGGTGGCCGACCAGAT TATATGAAGTATATGTTCACCTCAATCCTCATTTCATATATATATGTTTT TGTTGTGTTTTATAGTTCCACTATTTACATCTTCCTCAACAACAACAACA ACAACAACAACAACAACAACCAATACCAATGAAAGGGTCCAACCGCTCAG GATGCCATCTTCTTACCCTGTGCGTATTTATCTATCACTCTGTGCTCCTT CGTTGTACTTCTGCCTTCCAGGTGAAATTTTGTGGACTTGTTTAAATAGG ATCATTTTTAGTCTTACATGTCTAGTCCAAATACTCTACCAACCACCTTC CTGTTTCTAGGACAACATTAAGGTTCGGCACCAAGTCCACTCCTCGCATA CAAAACTTGCGCAATTCCTGTATGGATGTGGCACCAAACAGGCACGGATA ACTGACAAACATACTGGAACATGGTTGGAGAGGAACTATCCAAGAACACC TGGCGGCAAAGTGGTCGACAATACTTCAGGTAAAAGGAGAGAGACCTTGC CCGATCATGGGAAGGCTAACACATTGTACAACGTGACTTTGGTCTTATCT CGATTTCTGACGTTGTGATTATTGGTAGGCTATACTATGACATCCAATAC ACACCTCCTCATGTGCTACCAATGCCTACCACAAGACCCCATCTACCCTT GTGCGACAGGGAGGAACCATGCCGCCCTGTACCTGGCTGGGACCAGGCTC TTCGACCTGAGACGTGAAAGATGTCGTCCAATCTCCAGGGGTTGGAGGTT CAAGAAAAGTCTCCGGAACGCAGAGAGCCTTATTTCTTCTCTTGAAGGGG GCCAGGCAGACAGTGGAACTAGTGGAGAAATAACGTGTGAAAATAAGGGG GGAATTAAGGATATGGATGGAGAATCGAACCGTAGAAAGATGTTTACGCT TCTCGCAAGTGCCAGCATTTTAGTGAGCTACGCTGACCGTGGGAATATGG CGTCGGCTATCGTTCCAATGGGAGAGGCCTACGGTTGGGGGAAGGGGTTT GAGGGCGAGGTACTCTCGGCATTCTTCTTGGGATATGCACTCACTCAGGT ATGGCGGGTAGATTTCTGAGCTTGTATGCAGCATTTCACGGTGGGATATC CACAGTCTGATGAGCGCAGGACACCGCAGAAGCAGTTGCGTTCTTACCAC ACAACAAGGCAGTCTTGCGCTCAATATTTTATGCACCTTGAGAGAGATGG ATCGTTGAAACTCTTCTGGGCAAAATTCCATGGGGGAACTTTCAACTCAA GGTTCTGCAACTATAGAGATTGAAAGTACACGTGTGCTGACAATGCGGCA TGACCCACCTGCTGCACTTTCTCCCTGCTTCTTTTGTCATTTTTGTGGTT GCCACTTGACCTACACCTGATCTGGATGGATGAATCGGGGGTAATGTTTT GATGTATTCCACCTCTGTCGGGACCCCAGCTTATCGGTGGATGGCTGGCG GACCAATACGGGGGGCGGATGACTTTGATGGCTAGTCTCTTTGCATGGAG TGCCTTTACTCTTGTCACACCCCTTGCCGCCTCTGCAGGCCCTGCACCTC TGATTGCAGTCAGGCAAGAAGTAACCCCAAGGTAGTTGCTATTGTTGTGA AGGGCCGTTGTGCTGAACGATAAGAGAGACCAGTAGCTTGCATACACATT CATCTAAGGTGTGATGGTCTTTGCAGGGTGTGATGTTGAAGGCTGCCTGA GGACAGACTAAGCTACGAATTTGGGAGAGGAGTCGTATCTAGCTTCTCCT AGAGGTTATTTCCTGAAAACAGATTGACTTGGGATACCATAACAATCATG CTATCTCCCCCCACGTTCCCTTGACCTACCCCATCCTACCTCAAATACAT TAGCCTTTGCTTGCAAAGTGTACCCTCTGCTTAGCGTGGCACATTACAGA AGTGATTCCAATCTTCTAGAGCAAACTGACAACTGACTTACTTTCTGGTG GTGTATTGTGTGTGACTGTGTAGGGAACTCTGTACACTGGTCGATACTTT AGTGCTGTGTATCACCGCCTGCACACTAGCACGACACATACTCTCACCAG TCTGTGCTCCCAATGTTTGCACTCAGTCACCCTCCGTGACTAATTCATTT CAAGATAAACCTAGTTACTTTCTCCTCCAATTATACTGCTTTGTTAGTTC AACATGGTGTCACACCCATGCATACCCTGATATGGCAGGGTGGGACTAGG TCTGGGTGAGGGATTTGCCTTTCCTTCAGTGCATGCCATGATTGCCACGG ATGTTCCAAGAGAGAGCCAGTCTACCATTGTGAGAGGAAATTACCAACGG CAGGAGATAATATGCCATACAATGATGTGCAAGTACTTCTTAACAGCCAT GAGAAAGCTGTAATCATATTGAATTCTTGTGTCAGTATCTTAGAGCTGCT ATTGAACCTATGTAATGTGAAATAGACAACTCTACGCAGAGTTAGAGTTT GTGACTGATACAAATGTATCAGAGTAGACAGGTTTGCACACACTGGTTAT CTTGCTACTGAGACACATTCGCAACCCTTGGGAATGAGAAGGTGTAAGCA ATACTAACATTGAAATGTTACGTTATGCTGCCCTTGCCAAGCACAACTAT CTGCAATGATGCTGCCAGCTCTCACCTCCTGGAGTCAGATGAGGTAGGTT GAGTTGAGTGTTCATCTTGGGCAAACTCAGTGATGAATGTTGAACTCCTT GAGATATCTACAACAAAACCAAGAGTGGTCACATACCCAGTAGTATGAAA AACACTTCATAGGTGAAGCCCCCCCAGGAAGGAACCAAGCTTGGTTTGTA TGTGCTGTGAGTGGTAGAACCTAACCTCGGCATGTTTGCTTCTGGCTGCT CATTTGCTTGTGTTCAATTTTATATGTGTGGCAATGGGGCCTTTGGTGAG ACAGGTGGGAATTGTGACTGCTGCCAGTTATGCTGGAGCGCTGGTGGCGT TTGCAGTATCCCCTGTCCTTATCCACGCGCAGGGATGGGAATCAGTTTTC TATTGCTTCGGGGGCGTGTCGTTCCTCATCCTCCCTGGTTGGCTCCTTTA CCAGCAGAAGGGAAATGGTGTGAGCAAGGGTGGAGATGGAATAGGGTGAC CTTTGTTTGTCTTGATGGTAAAATGCAACAGCATCAGGGGGTATTCTATG TTGGGTGCATAGGTTTGTGGTGTGTGTGCTAGGGGGTGACAAGGTTCATC AGGATTAATGGCGTTGAAAGTACGCCATGTCAAGGATGTGTTTTGTGCGT ATGTGATTATGTTTGCTTTGCTGGTATTTTGTGTGCATGTCAAGGTGATT GGTGTATCTACTACCCTGTACAAGCAAAGTTCAGCACTAATTGCAATTCC AACAAATGCCTGAAACAAGATGACTCAGTACATTACCAACGATTCCTTTC CTGTTCATATATTCTTACTATGAGATGCCTTCCTGTTCTTCCCCTCTTCC CGTGGTGCTTAATATTTTCTGCCCAGGGACTCTGGACCCTGTCTTTCCAT CCACCCTCTCCCTAATTACTCTGCCATCACTCATCCCTAACCTACCACTC AATTCAAATATTGACGATAGAGATTGCAGGGAGTGTGATGTCCACCCCAA GAGTGCCGACTTCCCTCACAGAAGGACGCCATGAAGAAGGGGACAAGGAC TGGAAGTTGCAGTTTGTACGTGAGGTAGAAGATCTCAGGGAGGTAGCCAA GCAACTTTGTGCAAGAAAAGAGGCAAGGCAACCCTGCCATAGGGTGTTGA TGCCTTCTCCCCCCAAGGTTCATGCTGATTGAGAAGAACAGTACTTTGTG TTATTTGGTTGCACGTGCTGGTAGATCTGTCTACAGTATATCTTGATTTT TTTGTGTATCCTATAATTGCTGGAGACTATTGAACTGCAATCTGCATCTG ATGGTCTTCAAACCGGATACAAGGTAGACCAAGGACTGTGGAGGTTGATG GTAACATTGTCGAACATTGAAGGAAGATGAGTTGAAAATTTAAGATCCTA CTAGGAATTGTGGAGTATATGGATGGTGACTACCTGTCATGTGACCATCA GGTCCAGTCAGACCTCCAAGTCCATAGGTCACATTGATCCTATAGCACTC ATGCTTAGGCCACAGCGCTAGTCCCAGGTCTTGACTGAGGCACAGTGCCA TTTTGGGACCCGGCATGGTTGCCACTTGTCTCACAGAATGAGGTCCGGAT TTGAGTCTTAATCTGTAGTTCCCACTACATTTATGTGGACCCCAAAAACA CACTGTGAAGTACCTGCTCAGAGCTCTGGATATGTTTCACAGTGCTCTCA ACTAAGGCTATGTGGTACATTACTACTCAAACTTACTGGTTTCAACTAGA TTTCTGGGGCATCACTTGGACCACCAACCTCCTTATCTGCTGAATACTTA CCCTGATTTTTGCCTGCAACAGGTGTGGGCAATCCTCTCCGCACAGTTCA CCCAGTCTGTGGGCATGTATGGCCTATTGAGCTGGCTGCCCTCTTACCTC CATGATGAAAGGGGGCTGGGCTCAGATTCTGCAGAGATGGCAGCTCTTTC TGCTGCACCATATGCCCTTCAGGTTTGTTGAGTGCCTGACTTCACCCTGT TCTTCCTACTCTTCTCTGTTGTGGCTGCAACCTCTAACACCTACTGGCTG CACCTATGTTTGAGTAAAATTTGTGTCTACTGAGCATCCTGCAGAGGAAA TGCGCATGTATGTAGCACTTGTAGATTTTTCACTGTTCATAGATAGATGT CCTCAGCCATAGCAGGGTCATCTCGAACCACCCCCACACAACACCCTGTT GTTCCCATGCAATAATCCCAACAGTCCAATGTGCTCATTGTCCCCTTTGT GGCATGCTGCTCTAGACCTCTGTAGTGTCTTGGCACCTCCTTCCTCACAT TTAGTCTTTACACTACAAATAGGCTGTTGTGGGTGTTGCTGCTGGAGCAG CTGCAGATGCTCTCATCCGTGACCAGGGCTGTCGCGTAAAGACAGTCAGA CAGGTGTTTCAGGTGCTGGGGATGGCAGGACCGGCTTTTTGTCTTGCTGC GGCAGTGTCAGCAGAGCAGGCAGAGACAGGGTAGGTGGTAAACGCCATGT TCTTTGGGTGACGCTGGATAGATGAAAGCAGGGTTCATTGGAGTTCTGGT GGAATGGAAGTGAGAGGGTGGAGGTGTATGTATTACTTAACTGTCTTGAC TCTTCTTCCAGTATAGGATAGGAATGCTGTTCTATGTTATGAGTTTTTTT CCATTTTGCTCCACATGTGTGGTTGATAGCTCTGTCATGAGACATTTTTC TGGGCATGCAAAGGGGGTGTATGCTGTGGTGGTGCTATAGAAACCACTTG ATAATCATGCAGTGTATATATGTTCATTGTGAAGTAAAAGAGACAACTCT AATGGACTTTGCCTCAAACACACAAAGAAAATCTACGTCATGTTTCAGGA ATATAAAACATGTTGCACACTCTAGATGCAGCTGTGTTAATGTAAGCATA CATTTGGTTTTTGTCAATGCATCAATTTCTCAAATACTTGGGTTTCTTGT CTACTTCCTCATCAGTTCCTCTCCCAACTCTTCAGTATTGGATTGCATTA ACACGCTAACTCTTGCTTAGTACCGGTTATACAATTTTTTTCAACATGTA TGCCTGCTGTATGTCATGTGTCTCTGTGTGTACCTTTTTGATGTTGTGCA ACTGTGTGCAGGGTCTCCTTAATTGTCCTGGGTTTGGGAATGAGCGCTTT GACCCTTGCTGGGGTCTCAGTTAATCATCTAGGTAAGAGAAGAATGTTCA AATGACTATCCACTCGACTGTTGCTCTCTGTTTGCTTTTGAGACTGCAAT GGAGTTTTTTCTGGAAAACCTGAACTTATCCAACCTCCATGTAAAACCTG ATGTATGCTGTACTTCCTTCCTTGCTTATCCTCCAGTTTTAGTTTGGACA TCTTACATGCCCTTCATATTGTACCCTTCATTTTTGATGCTGAGGAGGAT AACCAGAGTAGCATGTGCATAACAGTTAAACTTTCGCTCTGAGCGCTATG TACTCATAGTAGGAATATTCTACAGAGCTTCTAACTTGGTGATTATTTTG TTTTGGTTCCAGATCGCGACAGAAGGTTGGCAGTGTTGAAAGACAGTTGG ACTGGAGTGCAAAACAGCAGCATCCTACAATACCTAGAGCTTCTCAATTA TCTATCCAATTCACACTAAACAAAGGTGTTTGTTTTGCGCTTGGTTTCTT GGCACTAACTCTTCCATTCAGACATAGCTCCCAAGAGCGCTGGGGTAGTG TTTGGTGCTGGAAATACTGCAGCCACCATGGCCGGCCTGCTCACGTGAGT CAGCCTCTCTGGTACAGTACTTCAAGATTTAAGGTATCCGTAGGTAGAAG AGATGTTCACCTCAACTAAGTAACCCTGGAGTGTATCATATGCTACAGAA ATTTCTTCCCTCTATATATAGTTCTTGACCTTTAAGTTGTTGCAACGTTT AGTTGTGAACGGAGATCTGCTGCCGAGTTGGTTGGCAAGGAGGTGATCGT TCTTCTAGCATGATATTTTGATACCCTATTGAAGAAAAGCGTGATGTACT CTTCCCTTACTTGACTGCATAACTGTGGTCATGCTGGACCAAATGCAACT TTGGCTTTTGTCTCTAGTTTCACTCTCTTGACTGTCATCACATTTCCACC CCAGTGAAAATGATACTCTGAACACAATCAAGTGGTTCATTCCTTTGACT CTTCTTTTCCTTGTCTATCTGCCCGACCCATCATGTTATTTTGTTTTGTC AGGGTGCCGCTCTGTGGATGGATTCTGGAAACGTACAATTCTTGGGAGGC GGTTTTTGGTTTGTTTACTTGCAGTTATGTGATGGGGTGTGTACTTTGGC TAGCGTGGGTGGGCGATGAGGAGATCGAATAGACTAGTCTAAACTTCTCA AAATGTCTGTGTAGTAGTGTTAAGTTCCCAAGTCTTCAGTTGAATTATAG ACAAGAGTCCACTGAAGTTGGAAGTCAAATCTATTTTTTTTAATCTGAGA GTGGTAAAAAGCTCAACGAATTCCATGAGGGACTTGGAGAGGTTTGGGCT CTGGGGCATGCTGTGATTATTTTGGACATAGTTTGAAGTAATTTTTAGTA TGGACCATAGTGTCGATAGTATGCTGCATTGAAGTGCTTGCGGCATGTGG CTCCCTTATGTGCTGAGGAAATCAAATTGAGTGCTTCCTCTCTTCAAAGT ATTTCATAGGTCACGGCCTTGCCAACATTGTTTTGTCGCAAAAGCATGAG CATGCATTTCAAGAACATAACAAGCACAGTGTGTTTTGTGTATGGGACAA AGACGCAACATACTGCTATCACTCAGATTGAACATGTTAATATTTATGCT TGAATTGTTACGTGATACGACATACTAGTATATATCAACGATGTGTGAAG ACTTATGTTACAGTTTGACTTCATACACCGTTCACAGTATGTCTAGTAGA AGATGGTTTTGGAGCACCTTTTGCATTGTACAGTTGGGGATATTTTATTC TGCAATACTGTACAATTTGGTTGTCATCACGTTGGACATAATTGTCTATA GAGAGTAGAAGTCCATGATATGGAGGATGGCTCACTACCTCATCTGAAGT TGACTAGATACTACAATTAATACACACAAGGGAAACTGATACAATCACTT GG
back to top

Coding sequence (CDS) from alignment at C-tenellus_contig101:17649..25900-

>mRNA_C-tenellus_contig101.3.6 ID=mRNA_C-tenellus_contig101.3.6|Name=mRNA_C-tenellus_contig101.3.6|organism=Choristocarpus tenellus KU2346|type=CDS|length=1308bp|location=Sequence derived from alignment at C-tenellus_contig101:17649..25900- (Choristocarpus tenellus KU2346)
ATGGATGGAGAATCGAACCGTAGAAAGATGTTTACGCTTCTCGCAAGTGC
CAGCATTTTAGTGAGCTACGCTGACCGTGGGAATATGGCGTCGGCTATCG
TTCCAATGGGAGAGGCCTACGGTTGGGGGAAGGGGTTTGAGGGCGAGGTA
CTCTCGGCATTCTTCTTGGGATATGCACTCACTCAGCTTATCGGTGGATG
GCTGGCGGACCAATACGGGGGGCGGATGACTTTGATGGCTAGTCTCTTTG
CATGGAGTGCCTTTACTCTTGTCACACCCCTTGCCGCCTCTGCAGGCCCT
GCACCTCTGATTGCAGTCAGGGTGGGACTAGGTCTGGGTGAGGGATTTGC
CTTTCCTTCAGTGCATGCCATGATTGCCACGGATGTTCCAAGAGAGAGCC
AGTCTACCATTGTGGGAATTGTGACTGCTGCCAGTTATGCTGGAGCGCTG
GTGGCGTTTGCAGTATCCCCTGTCCTTATCCACGCGCAGGGATGGGAATC
AGTTTTCTATTGCTTCGGGGGCGTGTCGTTCCTCATCCTCCCTGGTTGGC
TCCTTTACCAGCAGAAGGGAAATGAGATTGCAGGGAGTGTGATGTCCACC
CCAAGAGTGCCGACTTCCCTCACAGAAGGACGCCATGAAGAAGGGGACAA
GGACTGGAAGTTGCAGTTTGTACGTGAGGTAGAAGATCTCAGGGAGGTAG
CCAAGCAACTTTGTGCAAGAAAAGAGGTGTGGGCAATCCTCTCCGCACAG
TTCACCCAGTCTGTGGGCATGTATGGCCTATTGAGCTGGCTGCCCTCTTA
CCTCCATGATGAAAGGGGGCTGGGCTCAGATTCTGCAGAGATGGCAGCTC
TTTCTGCTGCACCATATGCCCTTCAGGCTGTTGTGGGTGTTGCTGCTGGA
GCAGCTGCAGATGCTCTCATCCGTGACCAGGGCTGTCGCGTAAAGACAGT
CAGACAGGTGTTTCAGGTGCTGGGGATGGCAGGACCGGCTTTTTGTCTTG
CTGCGGCAGTGTCAGCAGAGCAGGCAGAGACAGGGGTCTCCTTAATTGTC
CTGGGTTTGGGAATGAGCGCTTTGACCCTTGCTGGGGTCTCAGTTAATCA
TCTAGACATAGCTCCCAAGAGCGCTGGGGTAGTGTTTGGTGCTGGAAATA
CTGCAGCCACCATGGCCGGCCTGCTCACGGTGCCGCTCTGTGGATGGATT
CTGGAAACGTACAATTCTTGGGAGGCGGTTTTTGGTTTGTTTACTTGCAG
TTATGTGATGGGGTGTGTACTTTGGCTAGCGTGGGTGGGCGATGAGGAGA
TCGAATAG
back to top