mRNA_C-tenellus_contig10096.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10096.1.1 vs. uniprot
Match: A0A6H5L0T1_9PHAE (PAP-associated domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0T1_9PHAE) HSP 1 Score: 105 bits (262), Expect = 1.280e-26 Identity = 50/65 (76.92%), Postives = 54/65 (83.08%), Query Frame = 1 Query: 7 RFDPLFIEDPLNFSNNVGRNCFRIYQIQRAWSDAHASLTRALDDDLQSGC----LLKCIISDPEP 189 RFDPLFIEDP+N SNNVG NCFR+YQIQRAWSDAHASL RALDD+ Q LL+CIISDPEP Sbjct: 166 RFDPLFIEDPMNLSNNVGHNCFRVYQIQRAWSDAHASLARALDDESQLRASPYRLLRCIISDPEP 230
BLAST of mRNA_C-tenellus_contig10096.1.1 vs. uniprot
Match: A0A835ZHQ3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHQ3_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 1.870e-17 Identity = 37/43 (86.05%), Postives = 40/43 (93.02%), Query Frame = 1 Query: 7 RFDPLFIEDPLNFSNNVGRNCFRIYQIQRAWSDAHASLTRALD 135 RFDPLFIEDPL NNVGRNCFRIYQI+RAWSDAHA+LTRA+D Sbjct: 297 RFDPLFIEDPLALGNNVGRNCFRIYQIKRAWSDAHAALTRAMD 339
BLAST of mRNA_C-tenellus_contig10096.1.1 vs. uniprot
Match: A0A7R9ZBE5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZBE5_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 2.400e-14 Identity = 32/53 (60.38%), Postives = 40/53 (75.47%), Query Frame = 1 Query: 10 FDPLFIEDPLNFSNNVGRNCFRIYQIQRAWSDAHASLTRALDDDLQSGCLLKC 168 FDPLF+EDP+N NNVGRN FRI+Q+QRA+SDAH +L +L+ D S L C Sbjct: 41 FDPLFVEDPMNAGNNVGRNAFRIFQVQRAFSDAHRALVASLEWDTNSTGGLNC 93
BLAST of mRNA_C-tenellus_contig10096.1.1 vs. uniprot
Match: A0A448Z158_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z158_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 3.080e-14 Identity = 37/65 (56.92%), Postives = 48/65 (73.85%), Query Frame = 1 Query: 4 ARFDPLFIEDPLNFSNNVGRNCFRIYQIQRAWSDAHASLTRALDDDLQSGC------LLKCIISD 180 + FDPLF+EDPL+ +NNVGRN FRI Q+QRA+SDAH +L +LD DLQS LLKC++ + Sbjct: 1549 STFDPLFVEDPLSATNNVGRNAFRINQVQRAFSDAHRALVASLDWDLQSADPSDKYPLLKCLLGN 1613
BLAST of mRNA_C-tenellus_contig10096.1.1 vs. uniprot
Match: A0A7S2Q1J0_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2Q1J0_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 5.100e-13 Identity = 34/70 (48.57%), Postives = 48/70 (68.57%), Query Frame = 1 Query: 4 ARFDPLFIEDPLNFSNNVGRNCFRIYQIQRAWSDAHASLTRALDDDLQSGC---------LLKCIISDPE 186 +FDP+++EDPLN NNVGRN FRI+Q+QRA+SDAH +L AL+ D+ S LLKC++ + + Sbjct: 1422 GKFDPIWVEDPLNPGNNVGRNAFRIFQVQRAFSDAHRALVAALEWDINSMSEFGEDGEYPLLKCLLQNED 1491
BLAST of mRNA_C-tenellus_contig10096.1.1 vs. uniprot
Match: A0A7S2RE21_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RE21_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 2.300e-12 Identity = 32/50 (64.00%), Postives = 36/50 (72.00%), Query Frame = 1 Query: 4 ARFDPLFIEDPLNFSNNVGRNCFRIYQIQRAWSDAHASLTRALDDDLQSG 153 +FDPL IEDPLN NNVGRNCFRI QIQR +SDA + RA+D SG Sbjct: 42 CQFDPLHIEDPLNEGNNVGRNCFRIIQIQRVFSDARNKVFRAMDFQSTSG 91
BLAST of mRNA_C-tenellus_contig10096.1.1 vs. uniprot
Match: A0A7S2U5F7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U5F7_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 2.420e-12 Identity = 35/68 (51.47%), Postives = 47/68 (69.12%), Query Frame = 1 Query: 10 FDPLFIEDPLNFSNNVGRNCFRIYQIQRAWSDAHASLTRALD------DDLQSGC---LLKCIISDPE 186 FDPLFIEDPL+ NNVGRN FRI+Q+QRA++DAH +L +L+ DL G LLKC++ + + Sbjct: 1111 FDPLFIEDPLSAGNNVGRNAFRIFQVQRAFADAHRALVASLEWDMGSEGDLNDGSKYPLLKCLLQNED 1178
BLAST of mRNA_C-tenellus_contig10096.1.1 vs. uniprot
Match: A0A6U1NV11_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A6U1NV11_CYCTE) HSP 1 Score: 67.0 bits (162), Expect = 2.910e-12 Identity = 34/64 (53.12%), Postives = 45/64 (70.31%), Query Frame = 1 Query: 10 FDPLFIEDPLNFSNNVGRNCFRIYQIQRAWSDAHASLTRALD------DDLQSGC---LLKCII 174 FDPLF+EDPL+ NNVGRN FRI+Q+QRA+SDAH +L +L+ DL S LL+C++ Sbjct: 93 FDPLFVEDPLSVGNNVGRNAFRIFQVQRAFSDAHRALVASLEWEHSSTGDLNSETDYPLLQCLL 156
BLAST of mRNA_C-tenellus_contig10096.1.1 vs. uniprot
Match: A0A7R9WW00_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WW00_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 7.430e-12 Identity = 30/47 (63.83%), Postives = 38/47 (80.85%), Query Frame = 1 Query: 10 FDPLFIEDPLNFSNNVGRNCFRIYQIQRAWSDAHASLTRALDDDLQS 150 FDPLF+EDPL+ NNVGRN FR++QIQRA+SDAH +L +L+ D S Sbjct: 117 FDPLFVEDPLSPGNNVGRNAFRVFQIQRAFSDAHRALLASLEWDSHS 163
BLAST of mRNA_C-tenellus_contig10096.1.1 vs. uniprot
Match: A0A7S2PBI3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PBI3_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 1.490e-11 Identity = 32/67 (47.76%), Postives = 47/67 (70.15%), Query Frame = 1 Query: 10 FDPLFIEDPLNFSNNVGRNCFRIYQIQRAWSDAHASLTRALDDDLQSG-----C---LLKCIISDPE 186 FDPLF+EDPL+ SNN+GRN FRI+Q++RA++DAH +L L+ D+ C LLKC++ + + Sbjct: 235 FDPLFVEDPLSESNNIGRNAFRIFQVKRAFADAHRALIATLEWDMHDTPEDEKCQYPLLKCLLQNED 301 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10096.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10096.1.1 >prot_C-tenellus_contig10096.1.1 ID=prot_C-tenellus_contig10096.1.1|Name=mRNA_C-tenellus_contig10096.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=66bp MARFDPLFIEDPLNFSNNVGRNCFRIYQIQRAWSDAHASLTRALDDDLQSback to top mRNA from alignment at C-tenellus_contig10096:700..897+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10096.1.1 ID=mRNA_C-tenellus_contig10096.1.1|Name=mRNA_C-tenellus_contig10096.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=198bp|location=Sequence derived from alignment at C-tenellus_contig10096:700..897+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10096:700..897+ >mRNA_C-tenellus_contig10096.1.1 ID=mRNA_C-tenellus_contig10096.1.1|Name=mRNA_C-tenellus_contig10096.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=198bp|location=Sequence derived from alignment at C-tenellus_contig10096:700..897+ (Choristocarpus tenellus KU2346)back to top |