mRNA_C-tenellus_contig10095.1.3 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig10095.1.3
Unique NamemRNA_C-tenellus_contig10095.1.3
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
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BLAST of mRNA_C-tenellus_contig10095.1.3 vs. uniprot
Match: D8LGL7_ECTSI (Protein kinase domain-containing protein n=3 Tax=PX clade TaxID=569578 RepID=D8LGL7_ECTSI)

HSP 1 Score: 404 bits (1037), Expect = 1.710e-129
Identity = 186/213 (87.32%), Postives = 199/213 (93.43%), Query Frame = 1 
Query:   16 RFYIYELLKALDYCHSNGIMHRDVKPHNVMIDHDRKQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGTDELFNYLDKYDLELDPHFDGIMGRHSHRPWQKFINPENQHLVSDEAISFVGQLLRYDHQERLTARDAMGHPYLAPIRANLSKSTGGHGDAAEQGR 654
            R+YI+ELLKALDY HSNGIMHRDVKPHNVMIDH++KQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGTDELFNYLDKY+LELDPHFDGIMGRHS+RPWQKF+N ENQHLVS++AISFVGQLLRYDHQERLTA+DAM HPY   +RAN  K    H +A+EQ R
Sbjct:  129 RYYIFELLKALDYSHSNGIMHRDVKPHNVMIDHEQKQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGTDELFNYLDKYELELDPHFDGIMGRHSNRPWQKFVNTENQHLVSEDAISFVGQLLRYDHQERLTAKDAMDHPYFQAVRANQGKPVAAHNEASEQSR 341
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BLAST of mRNA_C-tenellus_contig10095.1.3 vs. uniprot
Match: B8BUK1_THAPS (Protein kinase domain-containing protein n=16 Tax=Bacillariophyta TaxID=2836 RepID=B8BUK1_THAPS)

HSP 1 Score: 378 bits (970), Expect = 5.610e-120
Identity = 168/195 (86.15%), Postives = 187/195 (95.90%), Query Frame = 1 
Query:   16 RFYIYELLKALDYCHSNGIMHRDVKPHNVMIDHDRKQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGTDELFNYLDKYDLELDPHFDGIMGRHSHRPWQKFINPENQHLVSDEAISFVGQLLRYDHQERLTARDAMGHPYLAPIR 600
            R+YI+ELLKALDYCHSNG+MHRDVKPHNVMIDH+++QLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGT+ELF+YLD YDLELDPHFDGI+GRHS +PWQKF+  +NQHL+S+EAI FV +LLRYDHQERL+A++AM HPY AP+R
Sbjct:  129 RYYIFELLKALDYCHSNGVMHRDVKPHNVMIDHEKRQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGTEELFHYLDTYDLELDPHFDGILGRHSKKPWQKFVTNDNQHLISEEAIDFVSKLLRYDHQERLSAKEAMSHPYFAPVR 323
[Close]
BLAST of mRNA_C-tenellus_contig10095.1.3 vs. uniprot
Match: A0A7S1H3V8_9STRA (Hypothetical protein n=2 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S1H3V8_9STRA)

HSP 1 Score: 376 bits (965), Expect = 1.710e-119
Identity = 168/201 (83.58%), Postives = 188/201 (93.53%), Query Frame = 1 
Query:   16 RFYIYELLKALDYCHSNGIMHRDVKPHNVMIDHDRKQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGTDELFNYLDKYDLELDPHFDGIMGRHSHRPWQKFINPENQHLVSDEAISFVGQLLRYDHQERLTARDAMGHPYLAPIRANLSKS 618
            R+YI+ELLKALDYCHSNG+MHRDVKPHNVMIDH+++QLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGT+ELF+YLD YDLELDPHFDGI+GRHS +PWQKFI PENQHLVSD+++ FV +LLRYDHQ+RL A++A  H Y AP+R   S++
Sbjct:  108 RYYIFELLKALDYCHSNGVMHRDVKPHNVMIDHEKRQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGTEELFHYLDTYDLELDPHFDGILGRHSRKPWQKFITPENQHLVSDDSLDFVSKLLRYDHQQRLAAKEASQHSYFAPVREAASRA 308
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BLAST of mRNA_C-tenellus_contig10095.1.3 vs. uniprot
Match: A0A7S2Y1K0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1K0_9STRA)

HSP 1 Score: 374 bits (961), Expect = 1.810e-118
Identity = 171/207 (82.61%), Postives = 185/207 (89.37%), Query Frame = 1 
Query:   16 RFYIYELLKALDYCHSNGIMHRDVKPHNVMIDHDRKQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGTDELFNYLDKYDLELDPHFDGIMGRHSHRPWQKFINPENQHLVSDEAISFVGQLLRYDHQERLTARDAMGHPYLAPIRANLSKSTGGHGD 636
            R+YIYELLKALDYCHSNGIMHRDVKPHNVMIDH+R+ LRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVD QEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGTDELF YLD YDLELDP FDGI+GRH+ +PWQ+F+  +NQHLV++EAI FV  LLRYDHQERLTA++AM HPY APIR    +     GD
Sbjct:  129 RYYIYELLKALDYCHSNGIMHRDVKPHNVMIDHERRHLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDYQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGTDELFQYLDTYDLELDPQFDGILGRHTKKPWQRFVTTDNQHLVTEEAIDFVSNLLRYDHQERLTAQEAMAHPYFAPIRQQHQQQQQAAGD 335
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BLAST of mRNA_C-tenellus_contig10095.1.3 vs. uniprot
Match: K0SUK6_THAOC (Protein kinase domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SUK6_THAOC)

HSP 1 Score: 377 bits (967), Expect = 3.660e-117
Identity = 167/201 (83.08%), Postives = 189/201 (94.03%), Query Frame = 1 
Query:   16 RFYIYELLKALDYCHSNGIMHRDVKPHNVMIDHDRKQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGTDELFNYLDKYDLELDPHFDGIMGRHSHRPWQKFINPENQHLVSDEAISFVGQLLRYDHQERLTARDAMGHPYLAPIRANLSKS 618
            R+YI+ELLKALDYCHSNG+MHRDVKPHNVMIDH+++QLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDY+LDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGT+ELF+YLD YDLELDPHFDGI+GRHS +PWQKF+  ENQHL+SDE+I FV +LLRYDHQERL+A++AM HPY  P+R   +++
Sbjct:  244 RYYIFELLKALDYCHSNGVMHRDVKPHNVMIDHEKRQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYALDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGTEELFHYLDTYDLELDPHFDGILGRHSKKPWQKFVTNENQHLISDESIDFVSKLLRYDHQERLSAKEAMSHPYFEPVRQAAARN 444
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BLAST of mRNA_C-tenellus_contig10095.1.3 vs. uniprot
Match: A0A7S2W3V8_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W3V8_9STRA)

HSP 1 Score: 367 bits (942), Expect = 1.720e-115
Identity = 169/209 (80.86%), Postives = 185/209 (88.52%), Query Frame = 1 
Query:   16 RFYIYELLKALDYCHSNGIMHRDVKPHNVMIDHDRKQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGTDELFNYLDKYDLELDPHFDGIMGRHSHRPWQKFINPENQHLVSDEAISFVGQLLRYDHQERLTARDAMGHPYLAPIRANLSKSTGGHGDAA 642
            R+YI ELLKAL+YCHSNGIMHRDVKPHNVMIDH+R+QLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVD QEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGTDEL  YLD+Y+LELDP FDG++GRHS +PWQ F+N ENQHL S EAI +VG LLRYDHQERLTA++AM HPY  P+     +   G G+AA
Sbjct:  135 RYYILELLKALEYCHSNGIMHRDVKPHNVMIDHERRQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDFQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGTDELIQYLDRYELELDPQFDGLIGRHSKKPWQNFLNSENQHLCSPEAIDYVGSLLRYDHQERLTAQEAMAHPYFLPV---TQREGAGGGEAA 340
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BLAST of mRNA_C-tenellus_contig10095.1.3 vs. uniprot
Match: A0A812SZF3_SYMMI (CKA4 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812SZF3_SYMMI)

HSP 1 Score: 364 bits (935), Expect = 6.040e-115
Identity = 163/195 (83.59%), Postives = 182/195 (93.33%), Query Frame = 1 
Query:   16 RFYIYELLKALDYCHSNGIMHRDVKPHNVMIDHDRKQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGTDELFNYLDKYDLELDPHFDGIMGRHSHRPWQKFINPENQHLVSDEAISFVGQLLRYDHQERLTARDAMGHPYLAPIR 600
            R+YI+ELLKALD+CH+NGIMHRDVKPHNVMIDHD+++LRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDY LDMWSLGCMFAGMIFRKEPFFHG DNYDQLVKIAKVLGTDELF YLD+YDLELD HFDG++GRH+ + W +FIN ENQHLVS+EA+SF+  LLRYDHQERLTA++AM HPY  P+R
Sbjct:  124 RYYIFELLKALDFCHANGIMHRDVKPHNVMIDHDKRELRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYGLDMWSLGCMFAGMIFRKEPFFHGQDNYDQLVKIAKVLGTDELFEYLDRYDLELDSHFDGLLGRHTKKSWNRFINAENQHLVSEEAMSFLSGLLRYDHQERLTAQEAMAHPYFQPVR 318
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BLAST of mRNA_C-tenellus_contig10095.1.3 vs. uniprot
Match: A0A7S3WWA4_9SPIT (Hypothetical protein n=2 Tax=Choreotrichia TaxID=141411 RepID=A0A7S3WWA4_9SPIT)

HSP 1 Score: 358 bits (918), Expect = 2.430e-113
Identity = 163/195 (83.59%), Postives = 180/195 (92.31%), Query Frame = 1 
Query:   16 RFYIYELLKALDYCHSNGIMHRDVKPHNVMIDHDRKQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGTDELFNYLDKYDLELDPHFDGIMGRHSHRPWQKFINPENQHLVSDEAISFVGQLLRYDHQERLTARDAMGHPYLAPIR 600
            RFYIYELLKAL++ HSNGIMHRDVKPHNVMIDH+++QLRLIDWGLAEFYHP RE+NVRVASRYFKGPELLVDLQ+YDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGTDELF+YLDKY+LELDPHFDG++GRH  +PW KFIN ENQHLVS EAI  + +LLRYDHQER +  +AM HPY AP+R
Sbjct:   66 RFYIYELLKALEHSHSNGIMHRDVKPHNVMIDHEKRQLRLIDWGLAEFYHPEREFNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGTDELFDYLDKYNLELDPHFDGLLGRHMRKPWSKFINAENQHLVSPEAIDLLDRLLRYDHQERPSPVEAMQHPYFAPVR 260
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BLAST of mRNA_C-tenellus_contig10095.1.3 vs. uniprot
Match: A0A0M0LQP0_9EUKA (Casein kinase ii alpha subunit n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0LQP0_9EUKA)

HSP 1 Score: 360 bits (924), Expect = 1.190e-112
Identity = 159/196 (81.12%), Postives = 184/196 (93.88%), Query Frame = 1 
Query:   16 RFYIYELLKALDYCHSNGIMHRDVKPHNVMIDHDRKQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGTDELFNYLDKYDLELDPHFDGIMGRHSHRPWQKFINPENQHLVSDEAISFVGQLLRYDHQERLTARDAMGHPYLAPIRA 603
            R+YI+ELLKAL++CHS+GIMHRDVKPHNVMIDH++++LRLIDWGLAEFYHP REYNVRVASRYFKGPELLVDLQ+YDY+LDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKI KVLGT+ELF+YLDKY+LELDPHFDGI+GRH+ +PW KF+NP+NQHLVS EA+  + +LLRYDHQERL+  +AM HPY AP+RA
Sbjct:  129 RYYIFELLKALEFCHSHGIMHRDVKPHNVMIDHEKRRLRLIDWGLAEFYHPEREYNVRVASRYFKGPELLVDLQDYDYALDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIVKVLGTEELFDYLDKYNLELDPHFDGILGRHARKPWSKFLNPDNQHLVSPEAVDLLDKLLRYDHQERLSPTEAMQHPYFAPLRA 324
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BLAST of mRNA_C-tenellus_contig10095.1.3 vs. uniprot
Match: A0A4D9D9E0_9STRA (Protein kinase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D9E0_9STRA)

HSP 1 Score: 372 bits (954), Expect = 1.290e-112
Identity = 167/197 (84.77%), Postives = 186/197 (94.42%), Query Frame = 1 
Query:   16 RFYIYELLKALDYCHSNGIMHRDVKPHNVMIDHDRKQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGTDELFNYLDKYDLELDPHFDGIMGRHSHRPWQKFINPENQHLVSDEAISFVGQLLRYDHQERLTARDAMGHPYLAPIRAN 606
            R+Y+ ELLKAL+YCHSNGIMHRDVKPHNVMI+H+R+QLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVD QEYDYSLDMWSLGCM AGM+FRKEPFFHGH+NYDQLVKIAKVLGTD+LF YL+KYDLELDP FDGI+GRHS +PWQKF+ PEN+ LVSDEAI F+GQLLRYDHQERLTA++AM HPY AP+RA+
Sbjct:  478 RYYMLELLKALEYCHSNGIMHRDVKPHNVMINHERRQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDFQEYDYSLDMWSLGCMLAGMVFRKEPFFHGHNNYDQLVKIAKVLGTDDLFAYLEKYDLELDPQFDGILGRHSKKPWQKFVTPENRALVSDEAIDFIGQLLRYDHQERLTAQEAMAHPYFAPVRAS 674
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10095.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGL7_ECTSI1.710e-12987.32Protein kinase domain-containing protein n=3 Tax=P... [more]
B8BUK1_THAPS5.610e-12086.15Protein kinase domain-containing protein n=16 Tax=... [more]
A0A7S1H3V8_9STRA1.710e-11983.58Hypothetical protein n=2 Tax=Bacillariophyta TaxID... [more]
A0A7S2Y1K0_9STRA1.810e-11882.61Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
K0SUK6_THAOC3.660e-11783.08Protein kinase domain-containing protein (Fragment... [more]
A0A7S2W3V8_9STRA1.720e-11580.86Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A812SZF3_SYMMI6.040e-11583.59CKA4 protein (Fragment) n=1 Tax=Symbiodinium micro... [more]
A0A7S3WWA4_9SPIT2.430e-11383.59Hypothetical protein n=2 Tax=Choreotrichia TaxID=1... [more]
A0A0M0LQP0_9EUKA1.190e-11281.12Casein kinase ii alpha subunit n=1 Tax=Chrysochrom... [more]
A0A4D9D9E0_9STRA1.290e-11284.77Protein kinase domain-containing protein n=1 Tax=N... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10095contigC-tenellus_contig10095:844..4775 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LGL7
Preferred nameCKA2
PFAMsPkinase
Model size2846
Max annot lvl2759|Eukaryota
KEGG koko:K03097
KEGG Pathwayko03008,ko04064,ko04137,ko04139,ko04310,ko04520,ko04712,ko05162,ko05168,ko05169,map03008,map04064,map04137,map04139,map04310,map04520,map04712,map05162,map05168,map05169
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005829,GO:0005956,GO:0006139,GO:0006259,GO:0006281,GO:0006325,GO:0006464,GO:0006468,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007154,GO:0007165,GO:0007275,GO:0007623,GO:0008150,GO:0008152,GO:0009314,GO:0009411,GO:0009416,GO:0009507,GO:0009536,GO:0009628,GO:0009648,GO:0009791,GO:0009987,GO:0010019,GO:0010212,GO:0010225,GO:0010229,GO:0010332,GO:0016043,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0022414,GO:0022607,GO:0023052,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0033554,GO:0034641,GO:0036211,GO:0040008,GO:0042752,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0046777,GO:0048367,GO:0048511,GO:0048580,GO:0048583,GO:0048608,GO:0048731,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051239,GO:0051259,GO:0051260,GO:0051262,GO:0051276,GO:0051289,GO:0051716,GO:0051726,GO:0061458,GO:0065003,GO:0065007,GO:0070013,GO:0071704,GO:0071840,GO:0080134,GO:0080135,GO:0090304,GO:0090567,GO:0140096,GO:1901360,GO:1901564,GO:2000026,GO:2000028,GO:2000241,GO:2001020
Exons4
Evalue4.02e-128
EggNOG OGsKOG0668@1|root,KOG0668@2759|Eukaryota
Ec32 ortholog descriptionSerine/threonine/dual specificity protein kinase, catalytic domain
Ec32 orthologEc-10_002680.1
EC2.7.11.1
Descriptionprotein serine/threonine kinase activity
Cds size609
COG categoryF
BRITEko00000,ko00001,ko01000,ko01001,ko03009
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10095.1.3prot_C-tenellus_contig10095.1.3Choristocarpus tenellus KU2346polypeptideC-tenellus_contig10095 916..2610 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789114.5430825-UTR-C-tenellus_contig10095:843..9151680789114.5430825-UTR-C-tenellus_contig10095:843..915Choristocarpus tenellus KU2346UTRC-tenellus_contig10095 844..915 +
1680789114.5995357-UTR-C-tenellus_contig10095:2610..47751680789114.5995357-UTR-C-tenellus_contig10095:2610..4775Choristocarpus tenellus KU2346UTRC-tenellus_contig10095 2611..4775 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789114.5588288-CDS-C-tenellus_contig10095:915..10531680789114.5588288-CDS-C-tenellus_contig10095:915..1053Choristocarpus tenellus KU2346CDSC-tenellus_contig10095 916..1053 +
1680789114.5681572-CDS-C-tenellus_contig10095:1290..14371680789114.5681572-CDS-C-tenellus_contig10095:1290..1437Choristocarpus tenellus KU2346CDSC-tenellus_contig10095 1291..1437 +
1680789114.5772917-CDS-C-tenellus_contig10095:1847..20151680789114.5772917-CDS-C-tenellus_contig10095:1847..2015Choristocarpus tenellus KU2346CDSC-tenellus_contig10095 1848..2015 +
1680789114.5856555-CDS-C-tenellus_contig10095:2454..26101680789114.5856555-CDS-C-tenellus_contig10095:2454..2610Choristocarpus tenellus KU2346CDSC-tenellus_contig10095 2455..2610 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig10095.1.3

>prot_C-tenellus_contig10095.1.3 ID=prot_C-tenellus_contig10095.1.3|Name=mRNA_C-tenellus_contig10095.1.3|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=203bp
MHRDVKPHNVMIDHDRKQLRLIDWGLAEFYHPGREYNVRVASRYFKGPEL
LVDLQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGTD
ELFNYLDKYDLELDPHFDGIMGRHSHRPWQKFINPENQHLVSDEAISFVG
QLLRYDHQERLTARDAMGHPYLAPIRANLSKSTGGHGDAAEQGRLPPQEG
LS*
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mRNA from alignment at C-tenellus_contig10095:844..4775+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig10095.1.3 ID=mRNA_C-tenellus_contig10095.1.3|Name=mRNA_C-tenellus_contig10095.1.3|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3932bp|location=Sequence derived from alignment at C-tenellus_contig10095:844..4775+ (Choristocarpus tenellus KU2346)
TTTTCCATCTATGAAAGGTTCTATATCTACGAGCTGCTCAAGGCCCTGGA
TTATTGCCATTCCAATGGAATCATGCACCGGGACGTCAAGCCTCATAATG
TTATGATAGACCATGATCGGAAACAGTTGCGCCTCATTGACTGGGGTCTA
GCGGAGTTTTACCACCCTGGGAGGGAGTACAACGTCCGGGTGGCCTCTCG
GTACTTCAAGGTCAGAGGTGGTGTCGAAGTGGTGGAGAAAGAACACCCTT
TTTTGTGCCTCCACCCCTTGAAGGCGTCTTTTAGGCTTTGGTTTTTGCTG
GCTTGAAGATGGGGGTGGGAAGAGGAGGTGTGCTTGTTCTTGTTGCTGCT
CTCTCCCCGTTTGTGTCCACTGTTGCTCGAGGCGTGTGAGTTAGTTGTGA
CTCTCCCACTGACGTGCTGCAGCGTGTTCTGCTTTTTCTTGTTTCAGGGT
CCGGAGCTCCTGGTGGACCTTCAGGAGTACGACTATTCGCTGGACATGTG
GTCGCTGGGGTGCATGTTTGCCGGCATGATCTTCAGGAAGGAACCGTTTT
TCCATGGGCATGATAATTACGACCAGCTTGTGAAGATTGCAAAGGTGTAC
TTAAGGACTTCCCCTTCCAACCCCCCCCCCCCCCCCCCCCCCCCCCCTTT
TTTTTCCCCCCCCCCCCGCCCCCACCTTTTTTTTTTTTTTTTTTTTTGTT
GGGTTTTTAGGTGTTTNNNNNNNNNNGGGAAGTGTGAAAGGTGTTTCTTA
GCGCCTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCATGCCCTTTTTTG
CCGTCCCCTGTGCCACGATGAATCTTGATTTGATTTTCCGTGTACGGTGT
TGCATAGAATGTCTGAAATGGTTGTGGAAGTTCGAATAATGGATAGAATG
CCGTCTGTTGATAGGGTAGTCCTTACACGCGTCCCTTTGAGAGGATCGTA
ACAACCGTGTCCCTTCGCTTTGAATTTTGGAATGCCTTTGTTTTGCATGT
TCAGGTGTTAGGTACGGACGAGTTGTTCAACTACCTGGACAAGTATGACC
TAGAGCTGGATCCACACTTCGACGGTATCATGGGCAGGCATAGCCACCGC
CCCTGGCAAAAGTTCATCAACCCGGAGAACCAGCACCTGGTGTCAGACGA
GGCGATCAGCTTTGTTGGGCAGGTGCAGTCATGTTTTTGTTTTTTTTGTG
GAGTAGTAGTCATGGTGGTTGTTTTGTGTTTTGGAAGATCTCCTTGTGTA
GCGTCCTGAATGGAGTGTGTGACTGTGGTGTGCGGACTGAAGGTGGATTC
ATGAGGAAGGGACTGAGAACAACCCCTGTCCAGTTCTGTTGTGAGGTCGC
CCTCTGGTTCCCTTTTCTTGAACTGGTGTGACCCTTGCTGGTCCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCGATTTTTAGTTT
TACTTTTAGGGTTAGGGTTAGGGTTAGAATGGTGCTGTTTCTGCTTTGTT
GTAATTTTTTTTTCTCCTCTCATCTGCTCTAATTTTCCTGTCACAGTAAC
GGTAACTTTTTTTTCCCTATCTTTTGTATTGTGTGTGTCTTGGATGGCGT
TTTCCTCTCAGCTCCTGCGATACGATCACCAGGAGCGATTGACAGCGAGG
GATGCAATGGGACATCCATACTTGGCTCCGATCAGAGCAAACCTGAGCAA
GTCAACAGGTGGGCATGGTGATGCTGCGGAGCAAGGTCGACTCCCTCCAC
AAGAGGGGTTGTCATAGCACCAATGGCCTTGGTGAGGTCCATTGGACGCT
CGTTTGGCGAGCATCGTGCGATGAGCGGTGGCGTTGTAAAAGGTTGTGTT
AGGAAAAGACGTGAGCAAGGACATGGGATGATGAGGACAACAGTGTGTAA
GGGTGCTGCTCTAAGAGGAGGGTTAAACATTTGAGTACTGTTGGTGTTAG
CATGAACGAGAACGAGGGAGTGGGGGGTGGGGGAGGGTGTGGGGTAGAGA
GGACAAGTCTGTTGGAGGGACCATCTGTTACGACTGAATGTAAGCGATCA
AATGATGCGCTATTATCACGCCTGCAGTACTATGTTGTATCCGCTGTCTT
TTTGATTAGTGGAACAAGAAAGCCGTCATGATGAAGAGGGACTAGTTGCC
GTAGTAATTATCGGATGTGGTGGTGTTGGATTATGGACTTGTGTGTTCTT
GTTTCTGTTCTTGCGATGCATCTTTTTCATTGATTAATATGGATGGTATG
TGGTACATGTGTGGGTGTAACATCCACTACCAGCGATGGCGCTCTTGAGG
ATGTTGGCGGTGCTTTGTTTGGTCACTGCATGCGCACAGAGGTGTAATGA
CAAAGGTGTCGGGAAAGAGATGCTTCGTAAGTTGTGCTGATGTGTATGTA
TGGTGGCCTAATGCAGAGTTGCTTGGGACAGGGGTGCAGTGAGATGGAGG
AGGTGGGGTGTATGTGGATCGTGAGGTGGGAAAAGTATGCACTATGTATG
CTGTGTCAGTATGCCTCCTAAGTTAAGCGACTTAGAAGTAAGTCTCCTGC
TACTGGCCACATGCACAGTATCTTTCTGGAATGCACTGTGGGTTTGTTAG
AGGTACTTGGGTGAGAAAACTGTAAGGGCTAAGGCTTTGCTTGGGTTTTT
TCATGAAGTGGTTTTACAGGAGTGCAGGGGTTGCTACAGCTAGCTGTGAT
TCCATGCTTTTGCTGCTATTTATCGTCGGTAATGGTACGAGGAGGAGTGT
CAACGTGTTGCTACAAATGAAATCCCAGATCATGAGCCTTTTCTCCTGGT
ATTGTGGACTCAGAGCCTGTTTGATTGTCAGTGGTGCAGTGGAGTGTCGG
TGGTGACTACTTGGGTGGTACTTTTATGTTGATCATAAGTAGGGTTGTCA
TCGGCGTCAGTGGCACTTTGTATTTTTCGTACTAATACTTCCAAGGCGTA
GTGATGCTTGCCAGAGTTCGAGAGTATTGTTGTTGTGTCCGGATGGTAGG
TTCTACTTTGCCGTAGCATGATGTTATGGAGGGATTAAGACATGAAGGTT
TCTTGAACAGATAGGAAGATGGTAGCCTGCTGGTGAATGAAAAATGCATA
GACGAGACGCTAGGTACTTTACGATGTTTTCAAGCATTGCCCAATGGCAG
CACCCTGTTGAGTTTGTGACTCTGTCAGTGACTTTTTTGTGTGTTGTACT
TTGAGGTTCTGATTTCATGGGCTTTTGGAGAGGAAGGGGGAGGTAGTTCA
CCCTTTAGGATTGTCTTGGTAATGGTGTACTTATTTTCAGTTGATTGATG
ATCGTGCGTTTTTGTTGGACTTGATCACATACATGGAGAGCGCAAGTGGG
GCATTTTCTCTCGTTTTCTTTTTTTACGTCTTGCATTATTCCTGAGCTTT
GTTCTGATCGTGTACTTATGTAGTTATTGTTTCTGGCCTTGAGGGGGCAT
TGGGGTGCTGCCGTGTTTGTTCAGAGTGATAAAAGGGCAGTGCAAGGAAT
CACCGTAAGTCAACCATATTGTAATGAAGGAGGAATAACGAAAAGGTGTT
GTGTGGGAGAACTGGTTTTGATTTGGACAATAAAGGGCAGAGACAGCAAG
AGACCTTCAAATAGTCTATGCAGTATATAGTTGTGGCACGTTTCAGTGTC
CGAAAAGGAGGGGGTAAGAGGATACGGCAAACAATATTTTTAGTCAGTTG
TGTTGCTGTTATGCACATCAATCTTCTAGAATCACTATGATGACTGATAC
GATCGTATCCATGTGTGTTAAGTATATGTTCTTATTCCTCCCATAGGCAT
ACATCATTAAGGGAAAAATATAGTATGAGGCAAACAAACCCACATACAAA
TCGGAATTTTAATTTAAAAAAGCAGGTTATTCGTAATGCAACACATCGCT
AAAGCATATGAATAAATTTTACCTCAAGTAAC
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Coding sequence (CDS) from alignment at C-tenellus_contig10095:844..4775+

>mRNA_C-tenellus_contig10095.1.3 ID=mRNA_C-tenellus_contig10095.1.3|Name=mRNA_C-tenellus_contig10095.1.3|organism=Choristocarpus tenellus KU2346|type=CDS|length=609bp|location=Sequence derived from alignment at C-tenellus_contig10095:844..4775+ (Choristocarpus tenellus KU2346)
ATGCACCGGGACGTCAAGCCTCATAATGTTATGATAGACCATGATCGGAA
ACAGTTGCGCCTCATTGACTGGGGTCTAGCGGAGTTTTACCACCCTGGGA
GGGAGTACAACGTCCGGGTGGCCTCTCGGTACTTCAAGGGTCCGGAGCTC
CTGGTGGACCTTCAGGAGTACGACTATTCGCTGGACATGTGGTCGCTGGG
GTGCATGTTTGCCGGCATGATCTTCAGGAAGGAACCGTTTTTCCATGGGC
ATGATAATTACGACCAGCTTGTGAAGATTGCAAAGGTGTTAGGTACGGAC
GAGTTGTTCAACTACCTGGACAAGTATGACCTAGAGCTGGATCCACACTT
CGACGGTATCATGGGCAGGCATAGCCACCGCCCCTGGCAAAAGTTCATCA
ACCCGGAGAACCAGCACCTGGTGTCAGACGAGGCGATCAGCTTTGTTGGG
CAGCTCCTGCGATACGATCACCAGGAGCGATTGACAGCGAGGGATGCAAT
GGGACATCCATACTTGGCTCCGATCAGAGCAAACCTGAGCAAGTCAACAG
GTGGGCATGGTGATGCTGCGGAGCAAGGTCGACTCCCTCCACAAGAGGGG
TTGTCATAG
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