mRNA_C-tenellus_contig1009.6.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig1009.6.1
Unique NamemRNA_C-tenellus_contig1009.6.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig1009.6.1 vs. uniprot
Match: A0A6H5L4S6_9PHAE (Methyltransf_11 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L4S6_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 1.400e-30
Identity = 59/90 (65.56%), Postives = 66/90 (73.33%), Query Frame = 1
Query:    7 YDSLEEGQVYISRVAQLTPGASASRAHFDVGDACSLDHTKLGTFDAVLASNLLCRLPRPRKFLESLSALVKPGGVAVIVSPYSWLTEYTP 276
            Y+ L++G     R A L  G   SRA F  GDACSLD   LG+FDAVLASNLLCRLP+PR FL  L ALVKPGGVAV++SPYSWL EYTP
Sbjct:  195 YEYLDQGSAVFRREAFLPEGTVPSRASFSQGDACSLDVKALGSFDAVLASNLLCRLPKPRSFLGDLPALVKPGGVAVLISPYSWLKEYTP 284          
BLAST of mRNA_C-tenellus_contig1009.6.1 vs. uniprot
Match: A0A835YQ70_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ70_9STRA)

HSP 1 Score: 115 bits (288), Expect = 3.710e-29
Identity = 57/91 (62.64%), Postives = 65/91 (71.43%), Query Frame = 1
Query:    7 YDSLEEGQVYISRVAQLTPGASASRAHFDVGDACSLDHTKLGTFDAVLASNLLCRLPRPRKFLESLSALVKPGGVAVIVSPYSWLTEYTPR 279
            Y SL EG V+   VA+   G   +R  F+ GDAC+L+   LG FDAVLASNLLCRLP PR FL +L  LV+PGG AVIVSPYSWL EYTPR
Sbjct:  161 YKSLVEGDVFRDAVAKAPQGVDVTRVKFERGDACNLNIAALGQFDAVLASNLLCRLPAPRAFLGALPRLVRPGGAAVIVSPYSWLQEYTPR 251          
BLAST of mRNA_C-tenellus_contig1009.6.1 vs. uniprot
Match: W4GNN7_9STRA (Methyltransf_11 domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GNN7_9STRA)

HSP 1 Score: 108 bits (270), Expect = 6.000e-27
Identity = 48/92 (52.17%), Postives = 69/92 (75.00%), Query Frame = 1
Query:    7 YDSLEEGQVYISRVAQLTPGASASRAHFDVGDACSLDHTKLGTFDAVLASNLLCRLPRPRKFLESLSALVKPGGVAVIVSPYSWLTEYTPRE 282
            Y++L +G V  +R+A++      S+  F  GDAC+LD T LG+FD V ASNLLCRLP+P++FL++L +LV+P G+  ++SPYSWL EYTP+E
Sbjct:  123 YEALIQGDVKQTRLAKVAADIDRSKVTFTQGDACNLDTTALGSFDLVFASNLLCRLPQPKQFLDALPSLVRPNGLLALISPYSWLEEYTPKE 214          
BLAST of mRNA_C-tenellus_contig1009.6.1 vs. uniprot
Match: A0A418F7M4_9STRA (Methyltransf_11 domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418F7M4_9STRA)

HSP 1 Score: 105 bits (263), Expect = 1.910e-26
Identity = 47/92 (51.09%), Postives = 67/92 (72.83%), Query Frame = 1
Query:    7 YDSLEEGQVYISRVAQLTPGASASRAHFDVGDACSLDHTKLGTFDAVLASNLLCRLPRPRKFLESLSALVKPGGVAVIVSPYSWLTEYTPRE 282
            Y++L +G V  +R+A++      S+  F  GDAC+LD   LG+FD V ASNLLCRLP+P+ FL++L +LV+P G+  ++SPYSWL EYTP+E
Sbjct:   66 YEALIQGDVKQTRLAKVAADIDRSKVTFTQGDACNLDGAALGSFDLVFASNLLCRLPQPKHFLDTLPSLVRPNGLLALISPYSWLEEYTPKE 157          
BLAST of mRNA_C-tenellus_contig1009.6.1 vs. uniprot
Match: A0A418AZX3_9STRA (Methyltransf_11 domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418AZX3_9STRA)

HSP 1 Score: 104 bits (259), Expect = 2.910e-26
Identity = 48/92 (52.17%), Postives = 65/92 (70.65%), Query Frame = 1
Query:    7 YDSLEEGQVYISRVAQLTPGASASRAHFDVGDACSLDHTKLGTFDAVLASNLLCRLPRPRKFLESLSALVKPGGVAVIVSPYSWLTEYTPRE 282
            Y++L +G +  SRVA++      S+  F  GDAC+LD  +LG FD V ASNLLCRLP P++FL +L +LV+  GV  ++SPYSWL EYTP+E
Sbjct:   25 YEALLQGDIKESRVAKVAADIDRSKVTFAQGDACNLDVAELGAFDLVFASNLLCRLPEPKQFLATLPSLVRSDGVLALISPYSWLEEYTPKE 116          
BLAST of mRNA_C-tenellus_contig1009.6.1 vs. uniprot
Match: A0A425DID9_9STRA (Methyltransf_11 domain-containing protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A425DID9_9STRA)

HSP 1 Score: 108 bits (270), Expect = 4.440e-26
Identity = 48/92 (52.17%), Postives = 69/92 (75.00%), Query Frame = 1
Query:    7 YDSLEEGQVYISRVAQLTPGASASRAHFDVGDACSLDHTKLGTFDAVLASNLLCRLPRPRKFLESLSALVKPGGVAVIVSPYSWLTEYTPRE 282
            Y++L +G V  +R+A++      S+  F  GDAC+LD T LG+FD V ASNLLCRLP+P++FL++L +LV+P G+  ++SPYSWL EYTP+E
Sbjct:  250 YEALIQGDVKQTRLAKVAADIDRSKVTFTQGDACNLDTTALGSFDLVFASNLLCRLPQPKQFLDALPSLVRPNGLLALISPYSWLEEYTPKE 341          
BLAST of mRNA_C-tenellus_contig1009.6.1 vs. uniprot
Match: A0A418DLN1_9STRA (Methyltranfer_dom domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418DLN1_9STRA)

HSP 1 Score: 105 bits (263), Expect = 1.450e-25
Identity = 47/92 (51.09%), Postives = 67/92 (72.83%), Query Frame = 1
Query:    7 YDSLEEGQVYISRVAQLTPGASASRAHFDVGDACSLDHTKLGTFDAVLASNLLCRLPRPRKFLESLSALVKPGGVAVIVSPYSWLTEYTPRE 282
            Y++L +G V  +R+A++      S+  F  GDAC+LD   LG+FD V ASNLLCRLP+P+ FL++L +LV+P G+  ++SPYSWL EYTP+E
Sbjct:  167 YEALIQGDVKQTRLAKVAADIDRSKVTFTQGDACNLDGAALGSFDLVFASNLLCRLPQPKHFLDTLPSLVRPNGLLALISPYSWLEEYTPKE 258          
BLAST of mRNA_C-tenellus_contig1009.6.1 vs. uniprot
Match: A0A6G0WWF3_9STRA (Methyltransf_11 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WWF3_9STRA)

HSP 1 Score: 104 bits (260), Expect = 2.610e-25
Identity = 47/92 (51.09%), Postives = 65/92 (70.65%), Query Frame = 1
Query:    7 YDSLEEGQVYISRVAQLTPGASASRAHFDVGDACSLDHTKLGTFDAVLASNLLCRLPRPRKFLESLSALVKPGGVAVIVSPYSWLTEYTPRE 282
            Y+++  G +  +R+A++      S+ HF+ GDAC+L  T LG FD V ASNLLCRLP P++FL+ L  LV+P GV  ++SPYSWL EYTP+E
Sbjct:  142 YEAMIHGDIKQTRMARVADDIDRSKVHFEQGDACALG-THLGEFDVVFASNLLCRLPEPKRFLDRLPTLVRPNGVLALISPYSWLEEYTPKE 232          
BLAST of mRNA_C-tenellus_contig1009.6.1 vs. uniprot
Match: A0A024TN22_9STRA (Methyltransf_11 domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TN22_9STRA)

HSP 1 Score: 104 bits (259), Expect = 2.670e-25
Identity = 48/92 (52.17%), Postives = 65/92 (70.65%), Query Frame = 1
Query:    7 YDSLEEGQVYISRVAQLTPGASASRAHFDVGDACSLDHTKLGTFDAVLASNLLCRLPRPRKFLESLSALVKPGGVAVIVSPYSWLTEYTPRE 282
            Y++L +G +  SRVA++      S+  F  GDAC+LD  +LG FD V ASNLLCRLP P++FL +L +LV+  GV  ++SPYSWL EYTP+E
Sbjct:  123 YEALLQGDIKESRVAKVAADIDRSKVTFAQGDACNLDVAELGAFDLVFASNLLCRLPEPKQFLATLPSLVRSDGVLALISPYSWLEEYTPKE 214          
BLAST of mRNA_C-tenellus_contig1009.6.1 vs. uniprot
Match: A0A2D4BLZ6_PYTIN (Methyltransf_11 domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BLZ6_PYTIN)

HSP 1 Score: 103 bits (256), Expect = 7.280e-25
Identity = 52/94 (55.32%), Postives = 63/94 (67.02%), Query Frame = 1
Query:    1 MCYDSLEEGQVYISRVAQLTPGASASRAHFDVGDACSLDHTKLGTFDAVLASNLLCRLPRPRKFLESLSALVKPGGVAVIVSPYSWLTEYTPRE 282
            M YD+  +G V  SRVA+L  GA   R  F  GDAC+L  + LG FDAV ASNLLCRLP P KFL  ++  V PGG+  ++SPYSWL EYT +E
Sbjct:  123 MPYDAQIQGDVRESRVARLPHGARPERTSFRQGDACNLSXS-LGQFDAVFASNLLCRLPEPHKFLTEINDFVAPGGIFALISPYSWLEEYTAKE 215          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1009.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4S6_9PHAE1.400e-3065.56Methyltransf_11 domain-containing protein n=2 Tax=... [more]
A0A835YQ70_9STRA3.710e-2962.64S-adenosyl-L-methionine-dependent methyltransferas... [more]
W4GNN7_9STRA6.000e-2752.17Methyltransf_11 domain-containing protein n=2 Tax=... [more]
A0A418F7M4_9STRA1.910e-2651.09Methyltransf_11 domain-containing protein (Fragmen... [more]
A0A418AZX3_9STRA2.910e-2652.17Methyltransf_11 domain-containing protein n=1 Tax=... [more]
A0A425DID9_9STRA4.440e-2652.17Methyltransf_11 domain-containing protein n=9 Tax=... [more]
A0A418DLN1_9STRA1.450e-2551.09Methyltranfer_dom domain-containing protein n=1 Ta... [more]
A0A6G0WWF3_9STRA2.610e-2551.09Methyltransf_11 domain-containing protein n=1 Tax=... [more]
A0A024TN22_9STRA2.670e-2552.17Methyltransf_11 domain-containing protein n=1 Tax=... [more]
A0A2D4BLZ6_PYTIN7.280e-2555.32Methyltransf_11 domain-containing protein n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig1009contigC-tenellus_contig1009:12161..13151 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LPQ6
PFAMsMethyltransf_11,Methyltransf_23,Methyltransf_25,Methyltransf_31
Model size282
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue4.81e-33
EggNOG OGs28JWG@1|root,2QSAN@2759|Eukaryota
DescriptionMethyltransferase domain
Cds size282
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789114.4209266-CDS-C-tenellus_contig1009:12160..123301680789114.4209266-CDS-C-tenellus_contig1009:12160..12330Choristocarpus tenellus KU2346CDSC-tenellus_contig1009 12161..12330 +
1680789114.4303129-CDS-C-tenellus_contig1009:13039..131511680789114.4303129-CDS-C-tenellus_contig1009:13039..13151Choristocarpus tenellus KU2346CDSC-tenellus_contig1009 13040..13151 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig1009.6.1prot_C-tenellus_contig1009.6.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig1009 12161..13151 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig1009.6.1

>prot_C-tenellus_contig1009.6.1 ID=prot_C-tenellus_contig1009.6.1|Name=mRNA_C-tenellus_contig1009.6.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=94bp
MCYDSLEEGQVYISRVAQLTPGASASRAHFDVGDACSLDHTKLGTFDAVL
ASNLLCRLPRPRKFLESLSALVKPGGVAVIVSPYSWLTEYTPRE
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mRNA from alignment at C-tenellus_contig1009:12161..13151+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig1009.6.1 ID=mRNA_C-tenellus_contig1009.6.1|Name=mRNA_C-tenellus_contig1009.6.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=991bp|location=Sequence derived from alignment at C-tenellus_contig1009:12161..13151+ (Choristocarpus tenellus KU2346)
ATGTGTTACGATTCATTAGAAGAAGGTCAAGTGTACATTTCAAGAGTGGC ACAACTTACACCAGGAGCATCAGCTTCACGTGCCCACTTTGATGTTGGTG ATGCTTGCTCATTGGACCATACCAAATTGGGGACATTTGACGCAGTCCTA GCCAGCAACCTCCTATGCCGGTATTGTACTTGGGGTTAGGGTTAGCATTG TTTATTTTTGTTTGCAAGTATCAGACTTTTTATTGTAAAGTACATTGGTA GACAGTAGGTGTTGAGATACCACAACTGATACAACATGTACAGGGCATAT TTGAACTTGTTTTGTGGAACACATTTGAGGGTATGTAGCAATGTAGCCAT AGATGATGTGGTGTAGGCTCAAGAGCAAACCTCATAGTGGGTGGTACGCA TGCATACTCATACACACACTCTCATGTCACCCCCAGTGCAGATGAATCTT AGTGATAGTATTAGTAAACTGTTGATATTTGTGTTGCAATCAATTTATTG CGTGGTTTAGGGTTGGGGTTGGGGTTAGCCAATACAAGCAATAGGTTTAC ATAGATGGGTATTGACTCTATACATGTCATGTTAATGTGTTTACAGATAC GTCAGCAAATGTCAAGTGTGTGTAGCGTGCCATTCTATTTTTTTTTAATC ACAAAAAAAAATGGAAGTGTTTGATTTGTGGCATCAAATAACTGTGCAAA TTACATGCATTGATGAAAAGCATCTTGACTGTAATGTTCTGTGTCCAATC AGTTGATCATATCACGTGTGGGTTGAATTAGTTGAGTGAGTTGAATAGAT CACATCCCCCTCATCTCAGTCCACCCCTCCTTTGCCTCCTATACTGTTTC TTTTCTTTTTTATACTATTTTTTTTTCAGTCTTCCCCGGCCAAGGAAATT TCTTGAAAGTCTGAGTGCATTGGTCAAGCCAGGAGGAGTAGCTGTCATTG TATCACCTTATTCCTGGCTTACAGAGTACACTCCAAGGGAG
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Coding sequence (CDS) from alignment at C-tenellus_contig1009:12161..13151+

>mRNA_C-tenellus_contig1009.6.1 ID=mRNA_C-tenellus_contig1009.6.1|Name=mRNA_C-tenellus_contig1009.6.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=282bp|location=Sequence derived from alignment at C-tenellus_contig1009:12161..13151+ (Choristocarpus tenellus KU2346)
ATGTGTTACGATTCATTAGAAGAAGGTCAAGTGTACATTTCAAGAGTGGC
ACAACTTACACCAGGAGCATCAGCTTCACGTGCCCACTTTGATGTTGGTG
ATGCTTGCTCATTGGACCATACCAAATTGGGGACATTTGACGCAGTCCTA
GCCAGCAACCTCCTATGCCGTCTTCCCCGGCCAAGGAAATTTCTTGAAAG
TCTGAGTGCATTGGTCAAGCCAGGAGGAGTAGCTGTCATTGTATCACCTT
ATTCCTGGCTTACAGAGTACACTCCAAGGGAG
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