|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Stop | 0 |
Start | 1 |
Model size | 1963 |
Hectar predicted targeting category | other localisation |
Exons | 6 |
Cds size | 1752 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1680789114.3346572-CDS-C-tenellus_contig1009:13..83 | 1680789114.3346572-CDS-C-tenellus_contig1009:13..83 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig1009 14..83 - |
1680789114.3465233-CDS-C-tenellus_contig1009:345..591 | 1680789114.3465233-CDS-C-tenellus_contig1009:345..591 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig1009 346..591 - |
1680789114.354863-CDS-C-tenellus_contig1009:2904..3630 | 1680789114.354863-CDS-C-tenellus_contig1009:2904..3630 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig1009 2905..3630 - |
1680789114.3631008-CDS-C-tenellus_contig1009:4535..4894 | 1680789114.3631008-CDS-C-tenellus_contig1009:4535..4894 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig1009 4536..4894 - |
1680789114.3761845-CDS-C-tenellus_contig1009:6131..6270 | 1680789114.3761845-CDS-C-tenellus_contig1009:6131..6270 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig1009 6132..6270 - |
1680789114.3845701-CDS-C-tenellus_contig1009:6787..6999 | 1680789114.3845701-CDS-C-tenellus_contig1009:6787..6999 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig1009 6788..6999 - |
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1680789114.3930583-UTR-C-tenellus_contig1009:6999..7210 | 1680789114.3930583-UTR-C-tenellus_contig1009:6999..7210 | Choristocarpus tenellus KU2346 | UTR | C-tenellus_contig1009 7000..7210 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig1009.1.1 >prot_C-tenellus_contig1009.1.1 ID=prot_C-tenellus_contig1009.1.1|Name=mRNA_C-tenellus_contig1009.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=584bp
MSRGDREESGTEDQHSREAEKGRKRDRSKVRSKSTERDRERSRGKVREKG RARSGDRGSDGSDDKSRDPERQSTSQRGSERKNGTKDSNENSNSLELETN SGEGRVHGTSVKSGSAKVSKSSMKSSSSRSSKSGKSGKSGKSSKTTDNSH KVDNNGHGSMGGSGAIEGHGHDVGTFKSSPSHGRDGKSSHGRGSREGSSS TSKSRSKSHSKSHSKSHANKDQSKEQFKGEDSDARDRGTAGGVTDGERND KGEGHDPHQSQQSKSRAGGRDSDSSKGSKSSKGKHKDKEKDKKEKDKTKR SRKEHKDDKHKDAEKNKSRDRDRDRDNSRDADRDRDKSRDRDNSRDADRD RDKSRDNSRDRDRDRVRDRDRAGEKDKEHDYDRGRGRGYDFDREHGRERD YERGRHWGRDDNRDDRRDRRDSRDRDLRDRDSRDMEAARERGWSKKSTGG DGRGSRSSIPWDGSPVGFYGPGTWQASSRDKARVSAERAPRKGSRDRDRG DRGDKGARDNKLNKDKDKEKDSEDNPNPGPTVGGNGSGTLAGSAVPQGLS PTKPIGLNRTRGDDGGGIRGRSRGGPGRGGMDGM back to topmRNA from alignment at C-tenellus_contig1009:14..7210- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-tenellus_contig1009.1.1 ID=mRNA_C-tenellus_contig1009.1.1|Name=mRNA_C-tenellus_contig1009.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=7197bp|location=Sequence derived from alignment at C-tenellus_contig1009:14..7210- (Choristocarpus tenellus KU2346) CTGAACTGTGGAGACAGGGACCAGGTACCTGTGTCTCCAACATTACATCA
GTCAGCGCGAAGATGCCCTGTGCAGGATATAGTTGGTGGGTATGACCGTA
TTAATCGTGATAGGTCACGGTCTTACTTTGTATGCTGTCGAAGGGAACTG
TTTGGAGGGTGAGGGCAGGAAGAGAGGCGGCGCCTATCTGTTTTGAATTG
CCACTAGGATAATGTCACGTGGGGACAGGGAGGAGAGTGGAACGGAAGAT
CAGCATAGTCGGGAAGCGGAGAAGGGTCGGAAACGGGATCGTAGTAAAGT
GCGAAGCAAGAGCACAGAGAGAGATAGAGAACGGAGCAGAGGTAAGGTTC
GCGAAAAGGGAAGAGCAAGATCTGGTGATCGTGGAAGTGACGGGAGCGAC
GACAAATCCAGGGATCCTGAAAGGCCAGTGCTGTTATGGAATCTTTCTCA
AATGATGAAACCTACACGTTAGCTTTTACTCATTGGTCAAGCGGTTGACT
CGCACGTGCATGATGTGTACAGCTACCTCATGGCACCTACTCGTTGGTAG
GTACTGCACATGGGTATGCGTCAATGCAAACCATTGAATGCCAAAGTCAT
GGTCAATAAGTACTGCAGCAGAATGCGTGGCTCGTAGTTTCTCCAATATT
TTACCATCGAAGCAAGCATTGCTTGTAAGTCGGGGGATAGAAGGGTAAGG
GGTTAGTTAATAGGTGCATCGCTGCACCAAACACGTTAGTCTTGAGATAA
TGCTGGCAAATCAACTTGGTGCGTAAATGTGTTTTCAAGAGCTTCTCCAG
GAGTCTTGAGTAATGAGCAGTGTGCTTACGATGCTTATGTATTGTGTTGG
GTGATGCTCATGTGGTGGCATGTTTTGATTGACGACTATTGAGTTGGAGT
TGCTGCCTTGGGTTAACTTGCCCTTTATTGCATGTAACAGACAGAGTACT
TCACAACGAGGGAGTGAAAGGAAGAATGGAACGAAGGACTCCAATGAGAA
CAGCAACAGCCTTGAGCTGGAGACCAACTCTGGGGAGGGCAGGGTGCATG
GGACATCAGTAAAGTCAGGAAGTGCCAAGGTAGCTTAGAGTATGAGTGCC
ACGAAGAAGTACACCCAGGTTGTGAGTCCCAAATGATTGTCACTTACTTT
TGTTTTGCCAAGTTTATTTCTTGAGCAGTGCCGTGTTTGTAATAGTCTAC
TTGTTCAATACTATTTTTTTCTCAGTACATTGAAGTGTGACAATACAAAG
TATTTAAGTACGTGCACCAATACATAAGCTACACTGAAGAGGAGAGGGTG
GCTAAAACAAACACTATTCATGGACTGATGCTAACTTTGATCATTGTTGT
GCTCATAAACCCGTTGCTAATACACCAATACATCAACAAACGCACTTGAG
TGGTACAGTACAGGAATACAGTTGGAATACAGTTGGAATACAGTTGTAGT
GTGCAAGCTGTTTGATGAGGCTACGTTTCTACATGTATTTCGTTTTTTTT
TTTGTTTAAATTTGTTTCGTTTTTTTCGTTTGATTGATTGCTTTACCGGG
GAAGAGCTGCAAATGATGTATATGACCACAGTTTGTGATGTATATGAGCG
CTCCCTTTCTTCTGTTTGCAGCAAGGTATTGCCATCCACACTGGATTATA
TGTAGGTTAGGGTTAGGATCAGCAGTGCTTTCTTGGTATTATTTGTATAA
ATATTGGGGAAGCATGTAAATGATGTATCTGTGACTGGTTCCAATTCATT
TCAATCATTCGCCATTAAGATTAATTATACATTCCGAGGTGATAGAGCAG
TATGTATTAGAACCTATTCAATGTATTAGAACCTATTCAATGTATTGTCA
CATTACACTTGAGGAAGAAAAGCAGGCGATGTTTGGCAATAGCTAGATTG
TGATTGGCATGGTGTATATTGAGTATCGTGGCCATTGCATACCTTTTCAA
CATCTGTTCCTAACCCTAAATCTGATGTGCTAGTAAACACCTTCCCGGTC
CCCTTTCACACTTTTAGTATGTAGTCTGGACTACATGGAAGCTCTCTTGC
GCAATCACACACTGCAATTGTATTATTATTATTATTATTATTATTATTAG
TGTTGTTATTATTATTTTCCATTATTATAGTGTGGTGTGTTAGAATATCC
AATCCACTACTATAACATATGCTCAATTGTTTATCACCTAGTGATAGAAG
TAGCCAATACTAACCCTACCACTACACTTGGATAATACCCAATAAACTAA
CACTTAGTCAAACACATACGATGCATACAACACATACAACACATACAACA
CATACAACACATACAGGTATCCAAGTCATCTATGAAGTCATCCAGTTCCA
GGTCAAGTAAGTCAGGCAAGTCAGGCAAGTCAGGCAAGTCAAGCAAGACA
ACGGACAATTCACACAAGGTAGACAACAATGGACATGGATCAATGGGAGG
AAGTGGAGCTATTGAAGGACATGGACATGATGTAGGTACTTTCAAGTCAT
CTCCCTCTCATGGCAGGGATGGCAAGAGTAGTCATGGCAGGGGCAGCAGG
GAAGGGAGTAGTAGTACCTCTAAGAGTCGCAGCAAGAGTCACAGCAAGAG
TCACAGCAAGAGCCATGCTAACAAGGACCAGTCCAAGGAACAATTCAAGG
GAGAAGACAGTGATGCAAGAGACAGGCAAGCATTTCGGTGTCGAGTAACA
ATATGTATACCATTATAATAAAAATATGTATACCATTATAATAAAAATAT
GTATACCATTATAATAACAATATGTATACCATTATAATAACAATATTCAT
ACCATTATAATAACAAAATGTATACCATTATAATAACAATATGTATACCA
TTAAAAATATGTATACCATTATAATAACAATATGTATACCATTATAATAA
CAATATTCATAGTATTATCGTGTTATGGCAGTTTCATGTCAAGCTCTTGT
TGGTGATGAGTTATGCCAAGATTGATATTAGCAGTAACAATAATAATTAA
AATACTATTAACAATAATAATAGTTAATATAGTAATGATACTTCCTATTG
ATTTGGACATGTAGGGTTAGCCCAGCTGTGGTGGTGAGATGCCCCATTAA
CTCTTGTTAATGGTATGGTACAGTTTCTATTAGCAAAAAAATTCCACCTC
CCATAATCTTAGTTGCAGTTCTTCCTCCTAATGCTGTGGTTCTTTTTCAA
GTATCACTCATACCAACTTTAGGGTTAGGGTACTGCCAACTTTACTCCTA
ATTCCTCTTGCATTGTTTTATGTGTATCTCTTGTCTTTGCGCTTCTAGGG
TTAGGGTTAGTTTCTTCTTTTTTCTCATGGTTGTTTTGTTTCACTGTGTG
TGCAAATATGTTCTATGTTCTATGTAGCTTGCTCATTTCTGCTTGATAAC
AGTAAAAATCGTTCAATAAAAATGGATAATAATAAAAAAACTATTTTCAC
TACGTGTCTTGACCTTTAGACCTTTAGACCTTTAGACCTTTGAGCATGTG
TTTCTTTGTTTTTTTGTGTCCTTGATATTGATGGTGTATGTATGCATTGC
AATTTCATTGTTCTTACTGGTTGTATGCAGGGGTACTGCAGGAGGCGTTA
CTGACGGTGAACGGAATGACAAAGGAGAAGGTCATGATCCACACCAATCC
CAACAATCAAAGAGCAGGGCAGGGGGAAGGGACAGTGACTCTTCAAAGGG
TTCCAAGAGCTCCAAGGGGAAACACAAGGACAAGGAGAAGGACAAGAAGG
AGAAGGACAAGACCAAACGGAGTAGAAAGGAACACAAAGATGACAAACAT
AAAGATGCAGAAAAGAACAAAAGCAGAGACAGAGACAGAGACAGAGACAA
CAGCAGGGATGCAGACAGAGACAGAGATAAGAGCAGAGACAGAGACAACA
GCAGGGATGCAGACAGAGACAGAGATAAGAGCAGAGACAACAGCAGGGAT
AGGGATAGGGATAGGGTGAGGGATAGAGACAGGGCAGGTGAAAAGGATAA
AGAACATGACTATGACAGGGGCAGGGGCAGGGGCTATGACTTTGACAGGG
AGCATGGAAGAGAGAGGGACTATGAGAGAGGAAGGCATTGGGGAAGAGAT
GACAACAGGGATGACAGGAGGGATCGTAGGGACTCGAGGGATAGGGACTT
GAGGGATAGGGACTCGAGGGATATGGAGGCGGCCAGAGAGAGAGGCTGGA
GCAAGAAAAGTACTGGGGGGGACGGAAGGGGAAGTAGGAGTTCGATACCT
TGGGATGGATCTCCTGTTGGATTCTATGGTCCAGGCACCTGGCAAGCATC
CTCAAGGTGATGTATCGATTGGTGCATTGTTTGTACCTTGATAGGATGGG
GGGCATTTTGAAGTATTATCATCATTATTATTATTATTATTATTATTATT
GTTATTATTATCATTGTTATTATTTCTAGGTTTAGTATTATTGGTAGTGG
TGATGTAGTAAGGGTTCGTATTGTTGATCTATTAGTACAATTTATTTGCT
GTAATACTTTTTTATTGATTTCAAGCATAATTTTGATTAGAGTTAGGGCT
AGGATCACATACTAGTTCGACTATTTGAAGAGTATGTACCAACCCTAACC
TCATGATATTTTTACTGACCCTAACCCTAGGAGGTGAATTTTTATTTTTT
TTGTATCCAGTGTTGTGCACTGACACCATTTTTATTTTTTCTGTATGACT
GACTATCGTTAAAATGCTCTGTATGAATTACTCATAACAGGTGTGTAACA
CTGCATCATTTTTTAGGGTTAGGGTTAGTACATTACTAACAAAAAAAAGA
ATGTGTCAATCGATAGGTGTAAATAGATGCCGATAAATTTACAGTGGTAC
ATCAGAGATGTATTAACATTGCTTAGAGCTTCTTGTGCTTTACTTAATTT
AGTTTAATTCATTCAACCCACTCATCAACAACAACAGACCTGCCTTAGTG
AATTTAGTTTAATTCAATCAATCTACTTATCACCAAAGAATAATAAAATT
TGTTTTACAACTCTTCTGTACGGTTTTCCCATCCCTAACCCTAACCCTAA
CCCCTTTTTTATTTTCTTGATTGTGAAGACGAGATGATAATGTAGACTAC
ATTCCTTTCACTACTTTCAGTAGTAACGCATGCGGTATTTTCGTTTAGTT
TATACATTTATACATACTCCACATATAACAAGAATAATAGTTGTAATAAT
AATAATAATAATATAAATCATAGTAATAGTAATAGTAATAATAATAATAA
TAATACACTACATTTTACTCAGTAATGTTTTACTTATACCTGCTGCTGTA
ACCGCCACCCTGTCAAACCCAAACCTTAACCTTAACCTTCACCTTAACCC
AAACCTTAACCTTAACCTTAACCTTAACCTTAACCTTGACCCATTTTTAT
TTTTTGTACCACTTGTGATTAGTCTGTAATTTTATGTCTTTCTGTTACTA
CTAATAGTACAGTAATATCCCCAAGTTTGTATTTTTATTTATTATATATG
TCTGTGCATTCTATTCACATCATTTTTTATTTGTACCTGCTGCTGCATCC
TTCACCCTGCCAAACCCAACCTTAACCCTAACCCATTTTTGTATAAGTAG
TCATCATTGTCCCTTGCATTTCTCTTACCCTTCCTATTACTCGTCATGAA
CTCTAACCCTAACCCTAACCTTAAAACCTTAAAATTATTATAATAATTAT
AATAATTATCGTTATTATGGATCAATAATCTCACCTTCAAATTTCTTTTC
TATTATCACTATTACTAGTACATCATTAACCCTAACCTTACAGCACAATG
GGGACAGTGTTTTATTAATTTAGAGGAGTCAATAACTGACAATAACTGAT
AATGACTGACAATAACTGACAATAACTGATAATAACTGACAATAACTGAC
AATGACTGACAATAACTGACAATAACTGACAATGACTGACAATAACTGAT
AATGATAATGATAATGACTGACAATAATGATAATAACTGACAATAATGAC
AATAATGACAATAATAACTGATAATAATGACAATAATGACAATAACCACG
GACAAATGACCATTGAACACAACTCAGTACTAGGCTATGTTGTGTATATA
TTCAATCAGTTTTCAGTCAGTCATCAGCCATCAATCAGTCATCAATCAGT
CATCAATCAGTCATCAATCAGTCACCAATCAATCATCAATCAATCCTGCT
TGTACTCGTGTCATAACTGTCTATACTAGCACAAACACTAAAATATATAT
AATAATTATTAATAGTAATATTAGTATATATTACTACATATTACTAGCAC
TAAAATATATATAATAATTATTTATAGTAGTATTAGTATTACTAACCCTA
ACCCTAATCAATAAACCAACTGTAGGAGCTAAATCCTAACCTTAACCCTA
ACCCTAAGAGTGGCAGTCACTCACTTATCCATGTAGAAGTTAAATATTAC
TCCCTTTTAACTGTTGCATTGCAGCATTAGCCCTAACCCTAAGACATACC
CTAACCCTAAGACATACCCTAACCCTTATAGTATAGTATAGTATTAGTTC
ACCATTGTCAACCCTCTGATCTCACAGCATTAGGTTTATCCCACAAATAC
ACCTTTATGACCCTTGAAGGGATAAAGCAAGGGTTAGTGCTGAGAGAGCA
CCAAGAAAGGGAAGCCGTGATCGTGATAGAGGTGATAGAGGTGATAAGGG
AGCAAGAGACAACAAACTCAACAAGGACAAGGACAAGGAGAAGGACAGTG
AAGATAACCCTAACCCTGGCCCCACGGTAGGAGGAAATGGATCCGGTACA
CTGGCTGGATCTGCTGTGCCTCAAGGGCTTTCACCCACCAAACCAATAGG
ACTGAATCGAACAAGGTATGTATAACTTCACCTCTTCACCTCTTCACCTG
TAGAATTGAGTACATGTAGAATTGAGTACATGTAGAATTGAGTACATGTT
ACATGTAGAATTGAGTACGCCCCAAAGCACAGTATACACCATGCTCATGT
TCCTAACCCTAACCTTGATAGTAATGGTAGTGATAGTAATACTAAGAACA
ATTGTACAGGGATTGCAGCAAACTAACCACTGGTATGGCTATGAATGAAA
TTTCACCCTTCCTGTGGTGTGAATTAGGGGGGATGATGGGGGGGGGATCC
GAGGCCGAAGTAGGGGCGGGCCTGGGAGGGGGGGGATGGATGGCATG back to topCoding sequence (CDS) from alignment at C-tenellus_contig1009:14..7210- >mRNA_C-tenellus_contig1009.1.1 ID=mRNA_C-tenellus_contig1009.1.1|Name=mRNA_C-tenellus_contig1009.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1752bp|location=Sequence derived from alignment at C-tenellus_contig1009:14..7210- (Choristocarpus tenellus KU2346) ATGTCACGTGGGGACAGGGAGGAGAGTGGAACGGAAGATCAGCATAGTCG GGAAGCGGAGAAGGGTCGGAAACGGGATCGTAGTAAAGTGCGAAGCAAGA GCACAGAGAGAGATAGAGAACGGAGCAGAGGTAAGGTTCGCGAAAAGGGA AGAGCAAGATCTGGTGATCGTGGAAGTGACGGGAGCGACGACAAATCCAG GGATCCTGAAAGACAGAGTACTTCACAACGAGGGAGTGAAAGGAAGAATG GAACGAAGGACTCCAATGAGAACAGCAACAGCCTTGAGCTGGAGACCAAC TCTGGGGAGGGCAGGGTGCATGGGACATCAGTAAAGTCAGGAAGTGCCAA GGTATCCAAGTCATCTATGAAGTCATCCAGTTCCAGGTCAAGTAAGTCAG GCAAGTCAGGCAAGTCAGGCAAGTCAAGCAAGACAACGGACAATTCACAC AAGGTAGACAACAATGGACATGGATCAATGGGAGGAAGTGGAGCTATTGA AGGACATGGACATGATGTAGGTACTTTCAAGTCATCTCCCTCTCATGGCA GGGATGGCAAGAGTAGTCATGGCAGGGGCAGCAGGGAAGGGAGTAGTAGT ACCTCTAAGAGTCGCAGCAAGAGTCACAGCAAGAGTCACAGCAAGAGCCA TGCTAACAAGGACCAGTCCAAGGAACAATTCAAGGGAGAAGACAGTGATG CAAGAGACAGGGGTACTGCAGGAGGCGTTACTGACGGTGAACGGAATGAC AAAGGAGAAGGTCATGATCCACACCAATCCCAACAATCAAAGAGCAGGGC AGGGGGAAGGGACAGTGACTCTTCAAAGGGTTCCAAGAGCTCCAAGGGGA AACACAAGGACAAGGAGAAGGACAAGAAGGAGAAGGACAAGACCAAACGG AGTAGAAAGGAACACAAAGATGACAAACATAAAGATGCAGAAAAGAACAA AAGCAGAGACAGAGACAGAGACAGAGACAACAGCAGGGATGCAGACAGAG ACAGAGATAAGAGCAGAGACAGAGACAACAGCAGGGATGCAGACAGAGAC AGAGATAAGAGCAGAGACAACAGCAGGGATAGGGATAGGGATAGGGTGAG GGATAGAGACAGGGCAGGTGAAAAGGATAAAGAACATGACTATGACAGGG GCAGGGGCAGGGGCTATGACTTTGACAGGGAGCATGGAAGAGAGAGGGAC TATGAGAGAGGAAGGCATTGGGGAAGAGATGACAACAGGGATGACAGGAG GGATCGTAGGGACTCGAGGGATAGGGACTTGAGGGATAGGGACTCGAGGG ATATGGAGGCGGCCAGAGAGAGAGGCTGGAGCAAGAAAAGTACTGGGGGG GACGGAAGGGGAAGTAGGAGTTCGATACCTTGGGATGGATCTCCTGTTGG ATTCTATGGTCCAGGCACCTGGCAAGCATCCTCAAGGGATAAAGCAAGGG TTAGTGCTGAGAGAGCACCAAGAAAGGGAAGCCGTGATCGTGATAGAGGT GATAGAGGTGATAAGGGAGCAAGAGACAACAAACTCAACAAGGACAAGGA CAAGGAGAAGGACAGTGAAGATAACCCTAACCCTGGCCCCACGGTAGGAG GAAATGGATCCGGTACACTGGCTGGATCTGCTGTGCCTCAAGGGCTTTCA CCCACCAAACCAATAGGACTGAATCGAACAAGGGGGGATGATGGGGGGGG GATCCGAGGCCGAAGTAGGGGCGGGCCTGGGAGGGGGGGGATGGATGGCA TG back to top
|