mRNA_C-tenellus_contig10073.1.2 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10073.1.2 vs. uniprot
Match: D8LIM0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIM0_ECTSI) HSP 1 Score: 231 bits (589), Expect = 1.470e-63 Identity = 115/157 (73.25%), Postives = 133/157 (84.71%), Query Frame = 3 Query: 924 LWEEAVLKEYNFEDAFDDYTMSLVQFGYVALFSAAFPLAPLLAMINNLVQTRVDAYKLCKTRRRPVAYKSSGIGVWDNVLEMMTVVGVITNCALVGATSVQIWRLIPGASTTEKFLVIVAAEHIILFIKYWVMSAMPRVPHKVQRALARDRASRDQK 1394 LWEEA+LKEYN D FDDYTMSL+QFGYVALFSAAFPLAPLLAMINNLVQTRVDA+K+CKTRRRP+A KS GIGVWDNVLE+M+V+ VITNCAL+G TS + W S + LV+V AEHIILF+KYW+ S++PRVP KVQRAL R+RA RDQ+ Sbjct: 509 LWEEALLKEYNMIDVFDDYTMSLIQFGYVALFSAAFPLAPLLAMINNLVQTRVDAHKICKTRRRPIALKSGGIGVWDNVLEVMSVIAVITNCALIGVTSERWWPA--DVSRATRILVVVVAEHIILFLKYWLESSVPRVPLKVQRALQRERAERDQR 663
BLAST of mRNA_C-tenellus_contig10073.1.2 vs. uniprot
Match: A0A6H5K7Q9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Q9_9PHAE) HSP 1 Score: 209 bits (533), Expect = 3.400e-60 Identity = 104/144 (72.22%), Postives = 122/144 (84.72%), Query Frame = 3 Query: 963 DAFDDYTMSLVQFGYVALFSAAFPLAPLLAMINNLVQTRVDAYKLCKTRRRPVAYKSSGIGVWDNVLEMMTVVGVITNCALVGATSVQIWRLIPGASTTEKFLVIVAAEHIILFIKYWVMSAMPRVPHKVQRALARDRASRDQK 1394 D FDDYTMSL+QFGYVALFSAAFPLAPLLAM+NNLVQTRVDA+K+CKTRRRP+A KS GIGVWDNVLE+M+V+ VITNCAL+G TS + W S + LV+V AEHIILF+KYW+ S++PRVP KVQRAL R+RA RDQ+ Sbjct: 3 DVFDDYTMSLIQFGYVALFSAAFPLAPLLAMVNNLVQTRVDAHKICKTRRRPIALKSGGIGVWDNVLEVMSVIAVITNCALIGVTSERWWPA--DVSRATRILVVVVAEHIILFLKYWLESSVPRVPLKVQRALHRERAERDQR 144
BLAST of mRNA_C-tenellus_contig10073.1.2 vs. uniprot
Match: A0A835YQ07_9STRA (Calcium-activated chloride channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ07_9STRA) HSP 1 Score: 191 bits (486), Expect = 4.080e-49 Identity = 95/150 (63.33%), Postives = 116/150 (77.33%), Query Frame = 3 Query: 924 LWEEAVLKEYNFEDAFDDYTMSLVQFGYVALFSAAFPLAPLLAMINNLVQTRVDAYKLCKTRRRPVAYKSSGIGVWDNVLEMMTVVGVITNCALVGATSVQIWRLIPGASTTEKFLVIVAAEHIILFIKYWVMSAMPRVPHKVQRALARD 1373 LWEEA L +Y D FDDYTMSL+QFGYV FS AFPLAPLLA++NNLVQ RVDA+KLC+TR GIGVWDNVLE+MT++ V+TNCALVG TS +W+L+P S+T K LV+VA EH++LF+KYWV S +PR P +V RAL R+ Sbjct: 1480 LWEEAELFDY---DIFDDYTMSLIQFGYVTFFSMAFPLAPLLALLNNLVQIRVDAFKLCRTR---------GIGVWDNVLEIMTILAVVTNCALVGVTSTIVWQLLPPMSSTYKVLVVVAVEHVLLFLKYWVESLIPRTPERVSRALQRE 1617
BLAST of mRNA_C-tenellus_contig10073.1.2 vs. uniprot
Match: A0A7S1XIG7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XIG7_9STRA) HSP 1 Score: 164 bits (416), Expect = 1.390e-40 Identity = 81/162 (50.00%), Postives = 114/162 (70.37%), Query Frame = 3 Query: 915 QSDLWEEAVLKEYNFEDAFDDYTMSLVQFGYVALFSAAFPLAPLLAMINNLVQTRVDAYKLCKTRRRPVAYKSSGIGVWDNVLEMMTVVGVITNCALVGATSVQIWRLIPGASTTEKFLVIVAAEHIILFIKYWVMSAMPRVPHKVQRALARDRASRDQKTA 1400 +S +WEE+++ Y + FDDY+ SL+QFGYV FS P+ P++A++NNL+ R+DAYKLC+TR RP+A ++SG+GVW NVL+++TVVG+IT CAL TS ++ P + T L++V EH ILF KYW+ S+MP VP V RAL +R S+ QK A Sbjct: 438 RSPVWEESLMPHY---EPFDDYSKSLLQFGYVVCFSTVLPITPIIALLNNLLMIRLDAYKLCRTRARPLAVRASGMGVWANVLQVLTVVGIITGCALTAVTSTRMRTWFPHINRTGLVLIMVVVEHFILFFKYWLQSSMPTVPRSVCRALELER-SQQQKRA 595
BLAST of mRNA_C-tenellus_contig10073.1.2 vs. uniprot
Match: A0A6A3TFL4_9STRA (Uncharacterized protein n=4 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3TFL4_9STRA) HSP 1 Score: 153 bits (386), Expect = 1.880e-39 Identity = 74/150 (49.33%), Postives = 107/150 (71.33%), Query Frame = 3 Query: 927 WEEAVLKEYNFEDAFDDYTMSLVQFGYVALFSAAFPLAPLLAMINNLVQTRVDAYKLCKTRRRPVAYKSSGIGVWDNVLEMMTVVGVITNCALVGATSVQIWRLIPGASTTEKFLVIVAAEHIILFIKYWVMSAMPRVPHKVQRALARDR 1376 W+EA LK Y D F+DYT LVQFGYV+ FS AFPLAPLLA++NN+++ R DA+KLC TR+RP+A+K+SGIGVW +VL++M+V+ V+TNC + ++ + R +P + T+K ++ EH++L IK W +P VP +V L R+R Sbjct: 105 WKEAGLKHY---DTFEDYTEMLVQFGYVSFFSLAFPLAPLLALLNNVLELRTDAFKLCHTRQRPLAHKASGIGVWLHVLQVMSVLAVLTNCFNLAYSTSLLERALPSVTPTQKVWIVFGIEHLMLLIKVWFDCVVPSVPREVSERLRRER 251
BLAST of mRNA_C-tenellus_contig10073.1.2 vs. uniprot
Match: H3GJM8_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GJM8_PHYRM) HSP 1 Score: 153 bits (387), Expect = 2.100e-39 Identity = 75/150 (50.00%), Postives = 105/150 (70.00%), Query Frame = 3 Query: 927 WEEAVLKEYNFEDAFDDYTMSLVQFGYVALFSAAFPLAPLLAMINNLVQTRVDAYKLCKTRRRPVAYKSSGIGVWDNVLEMMTVVGVITNCALVGATSVQIWRLIPGASTTEKFLVIVAAEHIILFIKYWVMSAMPRVPHKVQRALARDR 1376 WEEA LK Y D F+DYT LVQFGYV+ FS AFPLAPLLA++NNL++ R DA+KLC TR+RP+A+K+SGIGVW +VL++M+V+ V+TNC + ++ + R P + T+K ++ EH +L +K W+ +P VP V L R+R Sbjct: 105 WEEAGLKRY---DTFEDYTEMLVQFGYVSFFSLAFPLAPLLALLNNLLELRTDAFKLCHTRQRPLAHKASGIGVWLHVLQIMSVLAVLTNCFHLAYSTSLLERAFPSVTGTQKVWIVFGIEHSLLLVKVWLACVVPSVPRDVAERLRRER 251
BLAST of mRNA_C-tenellus_contig10073.1.2 vs. uniprot
Match: W2R7Z5_PHYPN (Uncharacterized protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2R7Z5_PHYPN) HSP 1 Score: 160 bits (406), Expect = 6.610e-39 Identity = 77/150 (51.33%), Postives = 109/150 (72.67%), Query Frame = 3 Query: 927 WEEAVLKEYNFEDAFDDYTMSLVQFGYVALFSAAFPLAPLLAMINNLVQTRVDAYKLCKTRRRPVAYKSSGIGVWDNVLEMMTVVGVITNCALVGATSVQIWRLIPGASTTEKFLVIVAAEHIILFIKYWVMSAMPRVPHKVQRALARDR 1376 WEEA LK+Y D F+DYT LVQFGYV+ FS AFPLAPLLA++NNL++ R DA+KLC+TR+RP+A+K+SGIGVW +VL++M+V+ V+TNC + ++ + R P + TEK ++ EH++L IK W+ +P VP V +L R+R Sbjct: 644 WEEAGLKQY---DTFEDYTEMLVQFGYVSFFSLAFPLAPLLALLNNLIEMRTDAFKLCQTRQRPLAHKASGIGVWLHVLQIMSVLAVLTNCFHLAYSTSLLERAFPSVTATEKVWIVFGIEHLLLLIKVWLACVVPSVPRDVNESLRRER 790
BLAST of mRNA_C-tenellus_contig10073.1.2 vs. uniprot
Match: V9F146_PHYPR (Uncharacterized protein n=8 Tax=Phytophthora TaxID=4783 RepID=V9F146_PHYPR) HSP 1 Score: 160 bits (406), Expect = 9.450e-39 Identity = 77/150 (51.33%), Postives = 109/150 (72.67%), Query Frame = 3 Query: 927 WEEAVLKEYNFEDAFDDYTMSLVQFGYVALFSAAFPLAPLLAMINNLVQTRVDAYKLCKTRRRPVAYKSSGIGVWDNVLEMMTVVGVITNCALVGATSVQIWRLIPGASTTEKFLVIVAAEHIILFIKYWVMSAMPRVPHKVQRALARDR 1376 WEEA LK+Y D F+DYT LVQFGYV+ FS AFPLAPLLA++NNL++ R DA+KLC+TR+RP+A+K+SGIGVW +VL++M+V+ V+TNC + ++ + R P + TEK ++ EH++L IK W+ +P VP V +L R+R Sbjct: 904 WEEAGLKQY---DTFEDYTEMLVQFGYVSFFSLAFPLAPLLALLNNLIEMRTDAFKLCQTRQRPLAHKASGIGVWLHVLQIMSVLAVLTNCFHLAYSTSLLERAFPSVTATEKVWIVFGIEHLLLLIKVWLACVVPSVPRDVNESLRRER 1050
BLAST of mRNA_C-tenellus_contig10073.1.2 vs. uniprot
Match: G4ZHV9_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZHV9_PHYSP) HSP 1 Score: 158 bits (400), Expect = 2.010e-38 Identity = 75/150 (50.00%), Postives = 109/150 (72.67%), Query Frame = 3 Query: 927 WEEAVLKEYNFEDAFDDYTMSLVQFGYVALFSAAFPLAPLLAMINNLVQTRVDAYKLCKTRRRPVAYKSSGIGVWDNVLEMMTVVGVITNCALVGATSVQIWRLIPGASTTEKFLVIVAAEHIILFIKYWVMSAMPRVPHKVQRALARDR 1376 WEEA LK+Y D F+DYT LVQFGYV+ FS AFPLAPLLA++NN+++ R DA+KLC TR+RP+A+K+SGIGVW +VL++M+V+ V+TNC + ++ + R P + T+K ++ EH++L +K W+ +P VPH+V L R+R Sbjct: 501 WEEAGLKQY---DTFEDYTEMLVQFGYVSFFSLAFPLAPLLALLNNVLELRTDAFKLCHTRQRPLAHKASGIGVWLHVLQVMSVLAVLTNCFNLAYSTSLLERAFPSVTPTQKVWIVFGIEHLLLLVKVWLDCVVPSVPHEVSERLRRER 647
BLAST of mRNA_C-tenellus_contig10073.1.2 vs. uniprot
Match: A0A225WQS3_9STRA (Anoctamin protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WQS3_9STRA) HSP 1 Score: 157 bits (398), Expect = 3.610e-38 Identity = 75/150 (50.00%), Postives = 109/150 (72.67%), Query Frame = 3 Query: 927 WEEAVLKEYNFEDAFDDYTMSLVQFGYVALFSAAFPLAPLLAMINNLVQTRVDAYKLCKTRRRPVAYKSSGIGVWDNVLEMMTVVGVITNCALVGATSVQIWRLIPGASTTEKFLVIVAAEHIILFIKYWVMSAMPRVPHKVQRALARDR 1376 WEEA LK+Y D F+DYT LVQFGYV+ FS AFPLAPLLA++NNL + R DA+KLC TR+RP+A+K+SGIGVW +VL++M+V+ V+TNC + ++ + R +P + T+K ++ EH++L +K W+ +P +P +V AL R+R Sbjct: 497 WEEAGLKQY---DTFEDYTEMLVQFGYVSFFSLAFPLAPLLALLNNLFELRADAFKLCHTRQRPLAHKASGIGVWLHVLQIMSVIAVLTNCFHLAYSTSLLERALPRVTATQKVWIVFGIEHLLLVLKVWLACVVPSIPREVTEALHRER 643 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10073.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10073.1.2 >prot_C-tenellus_contig10073.1.2 ID=prot_C-tenellus_contig10073.1.2|Name=mRNA_C-tenellus_contig10073.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=149bp MSLVQFGYVALFSAAFPLAPLLAMINNLVQTRVDAYKLCKTRRRPVAYKSback to top mRNA from alignment at C-tenellus_contig10073:2..2624+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10073.1.2 ID=mRNA_C-tenellus_contig10073.1.2|Name=mRNA_C-tenellus_contig10073.1.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2623bp|location=Sequence derived from alignment at C-tenellus_contig10073:2..2624+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10073:2..2624+ >mRNA_C-tenellus_contig10073.1.2 ID=mRNA_C-tenellus_contig10073.1.2|Name=mRNA_C-tenellus_contig10073.1.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=447bp|location=Sequence derived from alignment at C-tenellus_contig10073:2..2624+ (Choristocarpus tenellus KU2346)back to top |