mRNA_C-tenellus_contig1005.4.3 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig1005.4.3
Unique NamemRNA_C-tenellus_contig1005.4.3
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig1005.4.3 vs. uniprot
Match: D8LDR8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDR8_ECTSI)

HSP 1 Score: 206 bits (524), Expect = 8.740e-53
Identity = 189/592 (31.93%), Postives = 242/592 (40.88%), Query Frame = 1
Query:   49 TYTIVLEVEGSDHRETERIRWRGHVFPSVSSGALVDSLVMHLDKHF-----------SRLREFGEGRGYLMQFY----HNDE--GWSPLTADTPIQRIPRTCLVHVQ-FVPDNA----------ESPASAGLGDSSVLERRLYSRSESGCLDKDAE---------------------------IRPRALLALPWRNFELDFGGGG---LLIRDIPLFIRDVSNSEEGTGFFTWDGAVMLAKYLEHTTPLV--PFTSGKELSPPEMVWQGPSQGEQVQEGVLRGGERQ-------------------------WWRCQRQQYPRVLELGCGTGLAGLSAA-ALGARE---------------------------------------------VILSDLLYALDNTRANVYRNRTFLRTEEXXXXXXXXXXXXXSTGQEGRGVVRVRELDWREPLPLDLMDGGEFDLVLAADVVWLDDLVLPLVETLERVTEGWVKQGINAASHIAGAAAAKVDREGDVCRMGDWGEVMK-GEGGHGDECER---------RDR----REVLLAYQWRSSKTGKTLLEALGRSFNVQEVPPEVC 1389
            ++T V+E++     E ER+RWR       ++  +   L+  L KHF           +   E   G    +  Y    H+    GW+PL+  T  + IPR C V V  F    A          E P+S+  G+S    + L +   SG   ++A                            + P  +LALPWR F+ D GG G   L I    + IRDVSNS EGTG FTWDGAV+LAKYLEH    +   F   +     +  ++ P          +  G+                                R    RVLELGCGTGLAGL+AA A G R                                              V+L+DL YAL N RAN + N + L                 + G E   +    ELDW  PLP +L D   FDL+LAADVVWLDDLV PLV TLER+T GW   G++A S     A A   +E    R  + G     G G    ECE          R R    R VLLAYQWRS +TG+ LLE LG  F V+E+P E C
Sbjct:   19 SHTFVIEIDRQGAPEQERLRWRWRDSLGDNTAGVAQDLLSFLQKHFRAPAGSTPTTTAPAGERASGDQQDVDLYSVEVHDPARGGWTPLSVSTSSETIPRNCRVRVNIFAKPQATTTRCRQTTTEDPSSSSDGNSC---KNLSASLPSGPARRNATFDGTAVPGAATTVDGTPLPEDESSLDPVAPGEMLALPWRRFDKDLGGEGEEGLKICGNRVAIRDVSNSSEGTGLFTWDGAVLLAKYLEHRAVAMRRDFCEQQPCHSTQPSYRHPEGAGHGSSVTVAAGDSADVXXXXXXXXXXXXXXXXXXXXXXXXXXXVRAAPIRVLELGCGTGLAGLAAAFAFGRRHSGTSGDDNSEVNHPPPPSPCRRRNPLEGENDEGVAQCASPPAQVAVVLTDLEYALTNARANTFLNSSSLE----------------AVGAEVSSI----ELDWCRPLPRELSDKEAFDLILAADVVWLDDLVTPLVRTLERLTAGWPGGGVDAWSAPLPPAPANGTQEE---RRNETGLAASFGSGASPQECELGGCAARSGGRPRPPAGRRVLLAYQWRSERTGRALLEELGACFCVREIPAEEC 584          
BLAST of mRNA_C-tenellus_contig1005.4.3 vs. uniprot
Match: W7T984_9STRA (Nicotinamide N-methyltransferase, putative n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T984_9STRA)

HSP 1 Score: 134 bits (338), Expect = 1.210e-29
Identity = 116/342 (33.92%), Postives = 161/342 (47.08%), Query Frame = 1
Query:  442 RALLALPWRNFELDFGGGGLLIRDIPLFIRDVSNSEEGTGFFTWDGAVMLAKYL--EHTTPLVPFTSGKELSPPEMVWQGPSQGEQVQEGVLRGGERQWWRCQRQQYPRVLELGCGTGLAGLSAAALGAREVILSDLLYALDNTRANVYRNRTFLRTEEXXXXXXXXXXXXXSTGQEGRGVVRVRELDWREPLPLDLMDGGEFDLVLAADVVWLDDLVLPLVETLERVTEGWVKQG---------INAASHIAGAAAAKVDREGDVCRMGDWGEVMKGEGGHGDECER-----------RDRRE-----VLLAYQWRSSKTGKTLLEALGRS-FNVQEVPPE 1383
            + +LALP R F LD  G G+ + D  +F++ V+NS  GTG  TWDGAV+L+KYL  +HT      T+  +    +  ++            L+G              +V+ELG GTGL GLS A LGAREVIL+DL YAL+N   NV RN    R                  G+E  G V V E DW +P    L++G   D+V+AADVVWLD+LV PL   L  +  G  ++G         I+ +S + G +A  V    +    G       GE G G                + R+E       +AYQ RS++T   L+  + +    V+EVP E
Sbjct:  148 KPVLALPGRRFPLDLDGEGIPVLDTRIFVKGVANSGLGTGLTTWDGAVVLSKYLIKQHTH----ATARSQAPTFDFEFE-----------FLKG-------------KKVVELGAGTGLVGLSCAVLGAREVILTDLPYALENLNDNVRRNVGAWR---------GLVQGPPGVGRE-EGRVAVEEGDWLQPPASSLVEG--VDVVVAADVVWLDELVPPLGRYLATILMGGGREGGKGGERKRQISESSPVGGPSAGMVVPGLERPGKGGNETAESGEEGSGXXXXXXXXXXXXXGNPKSRKEWNFPVCFMAYQSRSAQTDALLMATMRQEGLVVEEVPAE 449          
BLAST of mRNA_C-tenellus_contig1005.4.3 vs. uniprot
Match: A0A6H5L4A1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4A1_9PHAE)

HSP 1 Score: 125 bits (313), Expect = 2.590e-29
Identity = 73/144 (50.69%), Postives = 84/144 (58.33%), Query Frame = 1
Query:  991 ELDWREPLPLDLMDGGEFDLVLAADVVWLDDLVLPLVETLERVTEGWVKQGINAASHIAGAAAAKVDRE------GDVCRMGDWGEVMKGEGG-HGDECERRDR----REVLLAYQWRSSKTGKTLLEALGRSFNVQEVPPEVC 1389
            ELDW  PLP +L D   FDL+LAADVVWLDDLV PLV TLER+T GW   G++A+      AAA   +E      G   R G      K EGG        R R    R VLLAYQWRS +TG+ LLE LG  F V+E+PPE C
Sbjct:    2 ELDWCRPLPRELSDKEAFDLILAADVVWLDDLVTPLVRTLERLTAGWPSGGVDASPAPLSPAAANGTQEEQRNETGLAARFGSGAVPQKCEGGGRAARSVGRSRPSAGRRVLLAYQWRSERTGRALLEELGACFRVREIPPEEC 145          
BLAST of mRNA_C-tenellus_contig1005.4.3 vs. uniprot
Match: A0A2D4BQT1_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BQT1_PYTIN)

HSP 1 Score: 117 bits (293), Expect = 1.840e-25
Identity = 84/237 (35.44%), Postives = 111/237 (46.84%), Query Frame = 1
Query:  451 LALPWRNFELDFGGGGLLIRDIPLFIRDVSNSEEGTGFFTWDGAVMLAKYLEHTTPLVPFTSGKELSPPEMVWQGPSQGEQVQEGVLRGGERQWWRCQRQQYPRVLELGCGTGLAGLSAAALGAREVILSDLLYALDNTRANVYRNRTFLRTEEXXXXXXXXXXXXXSTGQEGRGVVRVRELDWREPLPLDLMDGGEFDLVLAADVVWLDDLVLPLVETLERVTEGWVKQGINAASH 1161
            LALP R F++D   GG  I+D  + + +V NS  GTG  TWDG+V+LAKYLEH      F  GK                                       RVLE+G GTGL G+SAA LGA +V+L+DL Y + N + N+  N T    E              ++ +     +  + LDW  P      D G  DL+LA+DVVW+ DL+ PLV TL ++      QGI   SH
Sbjct:   40 LALPARLFDVDTLSGGFKIKDRAVVVGEVENSGLGTGLTTWDGSVVLAKYLEHKYSA--FMQGK---------------------------------------RVLEVGAGTGLVGISAALLGATDVVLTDLEYVVANLQKNI--NMTLAAAE--------------ASAKPVDARISAQVLDWFNPRT----DFGRVDLILASDVVWVKDLIPPLVNTLRQLAH---PQGIILLSH 212          
BLAST of mRNA_C-tenellus_contig1005.4.3 vs. uniprot
Match: A0A8K1CNV0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CNV0_PYTOL)

HSP 1 Score: 115 bits (288), Expect = 2.740e-24
Identity = 81/226 (35.84%), Postives = 109/226 (48.23%), Query Frame = 1
Query:  451 LALPWRNFELDFGGGGLLIRDIPLFIRDVSNSEEGTGFFTWDGAVMLAKYLEHTTPLVPFTSGKELSPPEMVWQGPSQGEQVQEGVLRGGERQWWRCQRQQYPRVLELGCGTGLAGLSAAALGAREVILSDLLYALDNTRANVYRNRTFLRTEEXXXXXXXXXXXXXSTGQEGRGV---VRVRELDWREPLPLDLMDGGEFDLVLAADVVWLDDLVLPLVETLERV 1119
            LALP R F +D   G   I    + + +V NS  GTG  TWDG+++LAKYLEH      F +G+                      L G              RVLE+G GTGL G+SA  LGA +V+L+DL Y +DN   NV                         TGQ  + +   V+  ELDW +P      D G+FDL+LA+DVVW+++LV PLV+TL+ +
Sbjct:  101 LALPSRLFPVDTTQGEFQINGHAVLVGEVENSGLGTGLTTWDGSIVLAKYLEHR-----FGNGQ----------------------LHG-------------KRVLEVGAGTGLVGISAGLLGAEQVLLTDLAYTMDNLARNV-----------------------ELTGQHAQQIKARVQPVELDWFQPRS----DLGDFDLILASDVVWVEELVRPLVQTLQTL 259          
BLAST of mRNA_C-tenellus_contig1005.4.3 vs. uniprot
Match: A0A418B4Q7_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418B4Q7_9STRA)

HSP 1 Score: 112 bits (281), Expect = 3.770e-23
Identity = 77/238 (32.35%), Postives = 111/238 (46.64%), Query Frame = 1
Query:  415 LDKDAEIRPRALLALPWRNFELDFGGGGLLIRDIPLFIRDVSNSEEGTGFFTWDGAVMLAKYLEHTTPLVPFTSGKELSPPEMVWQGPSQGEQVQEGVLRGGERQWWRCQRQQYPRVLELGCGTGLAGLSAAALGAREVILSDLLYALDNTRANVYRNRTFLRTEEXXXXXXXXXXXXXSTGQEGRGVVRVRELDWREPLPLDLMDGGEFDLVLAADVVWLDDLVLPLVETLERVTEG 1128
            L   ++   + +LA+  R+F   F  G   +  +PL+I +V N+ +GTG   WDG+V+LA+YLEH    V  + G + +                   +RG              RVLELG GTGL GL+A+  GA  V L+DL YAL+N   NV  NR                      G      V V ELDW  P      DG   D+V+ +D+VW++ L+ PLV+T+  + +G
Sbjct:  109 LSPSSDTASQPVLAIASRSFGFAFERGEFRVHGVPLYIGEVGNTGKGTGLTIWDGSVVLARYLEH----VSLSVGHDDN-------------------VRG-------------KRVLELGAGTGLVGLAASLCGASHVTLTDLAYALENLSRNVELNR----------------------GAISPAAVAVSELDWFAPQSSSFTDG--VDMVVGSDIVWVESLIEPLVQTIAVLLKG 286          
BLAST of mRNA_C-tenellus_contig1005.4.3 vs. uniprot
Match: A0A484EDE5_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EDE5_BRELC)

HSP 1 Score: 112 bits (281), Expect = 4.130e-23
Identity = 86/251 (34.26%), Postives = 115/251 (45.82%), Query Frame = 1
Query:  367 SSVLERRLYSRSESGCLDKDAEIRPRALLALPWRNFELDFGGGGLLIRDIPLFIRDVSNSEEGTGFFTWDGAVMLAKYLEHTTPLVPFTSGKELSPPEMVWQGPSQGEQVQEGVLRGGERQWWRCQRQQYPRVLELGCGTGLAGLSAAALGAREVILSDLLYALDNTRANVYRNRTFLRTEEXXXXXXXXXXXXXSTGQEGRGVVRVRELDWREPLPLDLMDGGEFDLVLAADVVWLDDLVLPLVETLERV 1119
            S + ERR  SR      + DA       LALP +NF    G   + I    +FI +V+NS +GTG  TWDG+V+LAKYLEH                             +   + G              RV+ELG GTGL G++AA LGA +VILSDL Y +DN   NV                          G+     V V  LDW +P P DL   G+ D++LA+DVVW+++L+ PLV T + +
Sbjct:  103 SQLGERR--SRLSITLANADAVFPGHTCLALPSKNFTDIAGDNKIEIDGRVVFISEVANSGKGTGLTTWDGSVVLAKYLEHN----------------------------RHSGIAGS-------------RVVELGSGTGLVGIAAAILGANQVILSDLPYVVDNLAKNVAET----------------VKLAARIGRPIESEVSVEVLDWFKP-PTDL---GDIDILLASDVVWVEELIPPLVATFDTL 290          
BLAST of mRNA_C-tenellus_contig1005.4.3 vs. uniprot
Match: A0A7S2U3H9_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2U3H9_9EUKA)

HSP 1 Score: 108 bits (270), Expect = 1.390e-22
Identity = 97/304 (31.91%), Postives = 131/304 (43.09%), Query Frame = 1
Query:  472 FELDFGGGGLLIRDIPLFIRDVSNS-EEGTGFFTWDGAVMLAKYLEHTTPLVPFTSGKELSPPEMVWQGPSQGEQVQEGVLRGGERQWWRCQRQQYPRVLELGCGTGLAGLSAAALGAREVILSDLLYALDNTRANVYRNRTFLRTEEXXXXXXXXXXXXXSTGQEGRGVVRVRELDWREPLPLDLMDGGEFDLVLAADVVWLDDLVLPLVETLER-VTEGWVKQGINAASHIAGAAAAKVDREGDVCRMGDWGEVMKGEGGHGDECERRDRREVLLAYQWRSSKTGKTLLEALG-RSFNVQEV 1374
            F LDF  G L I+  PL +R+++NS  +GTGF  WDG+V+LAKYLEH+                                ++G               V+ELG GTGL GL+AA LGA+ V L+DL Y L N +AN+  N   L +                      G    + LDW  P           D ++A+DVVW+D LV+PLV TL   VTE           H   A+  +   +  VC+      + K      D  +   +  VLLA+Q RS  T K L + L  R F + EV
Sbjct:    3 FPLDFASGELKIKGSPLLVREIANSGTDGTGFNIWDGSVVLAKYLEHSL----------------------------SAAMKGAS-------------VVELGSGTGLVGLAAAMLGAKAV-LTDLPYTLKNIKANIKANGRDLASHG--------------------GEANAQTLDWTTPRKHAKSLPKHIDFIIASDVVWVDWLVIPLVNTLHYLVTE-----------HNQKASDDEQAPKPRVCQ------IKKSPSSRTD-AKNAGKPLVLLAHQTRSLATDKHLWKLLNNRGFRIAEV 226          
BLAST of mRNA_C-tenellus_contig1005.4.3 vs. uniprot
Match: A0A6G0XKE4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XKE4_9STRA)

HSP 1 Score: 110 bits (275), Expect = 1.910e-22
Identity = 72/224 (32.14%), Postives = 104/224 (46.43%), Query Frame = 1
Query:  448 LLALPWRNFELDFGGGGLLIRDIPLFIRDVSNSEEGTGFFTWDGAVMLAKYLEHTTPLVPFTSGKELSPPEMVWQGPSQGEQVQEGVLRGGERQWWRCQRQQYPRVLELGCGTGLAGLSAAALGAREVILSDLLYALDNTRANVYRNRTFLRTEEXXXXXXXXXXXXXSTGQEGRGVVRVRELDWREPLPLDLMDGGEFDLVLAADVVWLDDLVLPLVETLERV 1119
            +LA+  R+F+  F  G   + D PL+I++V N+ +GTG   WDG+V+LAKYLE T+       GK                                       RVLELG GTGL GL+AA  GA EV ++DL Y L+N  AN+  N   L T                       VV   ELDW      D +     D+++ +D+VW++DL+ PLV+++ ++
Sbjct:  116 ILAIASRSFDYAFDKGEFKVLDKPLYIQEVGNTGKGTGLTIWDGSVVLAKYLESTSNPSHNVQGK---------------------------------------RVLELGAGTGLVGLAAAFCGASEVTITDLAYTLENVDANIRANAEALSTS----------------------VVSTHELDWFAKDIPDSLRVQTVDILVGSDIVWVEDLIPPLVDSIAKL 278          
BLAST of mRNA_C-tenellus_contig1005.4.3 vs. uniprot
Match: A0A0W8DVN1_PHYNI (Lysine methyltransferase METTL21D protein n=10 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DVN1_PHYNI)

HSP 1 Score: 110 bits (275), Expect = 2.950e-22
Identity = 81/233 (34.76%), Postives = 107/233 (45.92%), Query Frame = 1
Query:  424 DAEIRPRALLALPWRNFELDFGGGGLLIRD-IPLFIRDVSNSEEGTGFFTWDGAVMLAKYLEHTTPLVPFTSGKELSPPEMVWQGPSQGEQVQEGVLRGGERQWWRCQRQQYPRVLELGCGTGLAGLSAAALGAREVILSDLLYALDNTRANVYRNRTFLRTEEXXXXXXXXXXXXXSTGQEGRGVVRVRELDWREPLPLDLMDGGEFDLVLAADVVWLDDLVLPLVETLERV 1119
            DA       LALP R F LD   G   + D   + I ++ NS +GTG  TWDG+V+LAKYLE+                             +   + G              RV+ELG GTGL G+SAA LGAR+VILSDL Y +DN   N+                        STG+     V  + LDW  P P DL   G+ D +LA+DVVW+++L+ PLV T + +
Sbjct:  123 DALFPDHTCLALPSRIFGLDVAAGDKFVIDGRVVHIGEIGNSGKGTGLTTWDGSVVLAKYLEYQ----------------------------RRSDIAGS-------------RVVELGAGTGLVGISAALLGARQVILSDLDYVVDNLARNMAETMKLAA----------------STGRPVESDVSTQVLDWFNP-PTDL---GDVDFLLASDVVWVEELIPPLVATFDTL 294          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1005.4.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDR8_ECTSI8.740e-5331.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
W7T984_9STRA1.210e-2933.92Nicotinamide N-methyltransferase, putative n=2 Tax... [more]
A0A6H5L4A1_9PHAE2.590e-2950.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2D4BQT1_PYTIN1.840e-2535.44Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A8K1CNV0_PYTOL2.740e-2435.84Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A418B4Q7_9STRA3.770e-2332.35Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A484EDE5_BRELC4.130e-2334.26Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A7S2U3H9_9EUKA1.390e-2231.91Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A6G0XKE4_9STRA1.910e-2232.14Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A0W8DVN1_PHYNI2.950e-2234.76Lysine methyltransferase METTL21D protein n=10 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig1005contigC-tenellus_contig1005:9277..14124 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog227086.JGI_V11_72454
Preferred nameVCPKMT
PFAMsMethyltransf_16
Model size3231
Max annot lvl2759|Eukaryota
KEGG koko:K21804,ko:K21806
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016278,GO:0016279,GO:0016740,GO:0016741,GO:0018022,GO:0018023,GO:0018193,GO:0018205,GO:0019538,GO:0019899,GO:0032259,GO:0032780,GO:0032991,GO:0036211,GO:0043086,GO:0043170,GO:0043412,GO:0043414,GO:0043462,GO:0044092,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0050790,GO:0051117,GO:0051336,GO:0051346,GO:0065007,GO:0065009,GO:0071704,GO:0140096,GO:1901564
Exons5
Evalue4.81e-26
EggNOG OGsKOG2793@1|root,KOG2793@2759|Eukaryota
Descriptionlysine N-methyltransferase activity
Cds size1353
COG categoryS
BRITEko00000,ko01000,ko03019,ko03110
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig1005.4.3prot_C-tenellus_contig1005.4.3Choristocarpus tenellus KU2346polypeptideC-tenellus_contig1005 9319..12288 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789112.5849118-UTR-C-tenellus_contig1005:9276..93181680789112.5849118-UTR-C-tenellus_contig1005:9276..9318Choristocarpus tenellus KU2346UTRC-tenellus_contig1005 9277..9318 +
1680789112.6629965-UTR-C-tenellus_contig1005:12288..141241680789112.6629965-UTR-C-tenellus_contig1005:12288..14124Choristocarpus tenellus KU2346UTRC-tenellus_contig1005 12289..14124 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789112.6027274-CDS-C-tenellus_contig1005:9318..93671680789112.6027274-CDS-C-tenellus_contig1005:9318..9367Choristocarpus tenellus KU2346CDSC-tenellus_contig1005 9319..9367 +
1680789112.6142852-CDS-C-tenellus_contig1005:9510..96691680789112.6142852-CDS-C-tenellus_contig1005:9510..9669Choristocarpus tenellus KU2346CDSC-tenellus_contig1005 9511..9669 +
1680789112.6320856-CDS-C-tenellus_contig1005:10109..104321680789112.6320856-CDS-C-tenellus_contig1005:10109..10432Choristocarpus tenellus KU2346CDSC-tenellus_contig1005 10110..10432 +
1680789112.6443284-CDS-C-tenellus_contig1005:10906..113631680789112.6443284-CDS-C-tenellus_contig1005:10906..11363Choristocarpus tenellus KU2346CDSC-tenellus_contig1005 10907..11363 +
1680789112.6529658-CDS-C-tenellus_contig1005:11923..122881680789112.6529658-CDS-C-tenellus_contig1005:11923..12288Choristocarpus tenellus KU2346CDSC-tenellus_contig1005 11924..12288 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig1005.4.3

>prot_C-tenellus_contig1005.4.3 ID=prot_C-tenellus_contig1005.4.3|Name=mRNA_C-tenellus_contig1005.4.3|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=451bp
MTTYTIVLEVEGSDHRETERIRWRGHVFPSVSSGALVDSLVMHLDKHFSR
LREFGEGRGYLMQFYHNDEGWSPLTADTPIQRIPRTCLVHVQFVPDNAES
PASAGLGDSSVLERRLYSRSESGCLDKDAEIRPRALLALPWRNFELDFGG
GGLLIRDIPLFIRDVSNSEEGTGFFTWDGAVMLAKYLEHTTPLVPFTSGK
ELSPPEMVWQGPSQGEQVQEGVLRGGERQWWRCQRQQYPRVLELGCGTGL
AGLSAAALGAREVILSDLLYALDNTRANVYRNRTFLRTEEEDEGGGSGGG
EEESTGQEGRGVVRVRELDWREPLPLDLMDGGEFDLVLAADVVWLDDLVL
PLVETLERVTEGWVKQGINAASHIAGAAAAKVDREGDVCRMGDWGEVMKG
EGGHGDECERRDRREVLLAYQWRSSKTGKTLLEALGRSFNVQEVPPEVCM
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mRNA from alignment at C-tenellus_contig1005:9277..14124+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig1005.4.3 ID=mRNA_C-tenellus_contig1005.4.3|Name=mRNA_C-tenellus_contig1005.4.3|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4848bp|location=Sequence derived from alignment at C-tenellus_contig1005:9277..14124+ (Choristocarpus tenellus KU2346)
GGGAAACTTTACAGCAGGTGGTGCAGGAGACACCTTTATGCAATGACGAC ATACACCATAGTGCTTGAGGTCGAGGGTTCGGACCATCGAGGTCAGTCCT ATGAGTTTGCGGTGCATACAAAGTCTTGTTATCCGAGTTTGTTCAGGAAG AGTCGTCCTGTACCACACATGGACCTCCTCGAGCATGCTCCTCACGGACA TCTTGTTGGTCTTTACTTATTGACCCCCATACAGAGACGGAGAGGATACG ATGGAGGGGACACGTATTCCCCTCTGTGTCTAGTGGCGCCCTGGTGGACA GCCTCGTGATGCATCTTGACAAGCATTTTTCTAGACTCCGCGAGTTTGGT GAGGGGCGAGGTTACTTGATGCAATTCTACCACAACGACGAAGGTGAGGA GATATTCCATGATTTATTTCAACTCCCTTATAAGAGCTTATTGTGTCGTC TGTTGCAACCATTCTCCATATTTTTTGTTTTGGTCTGTTGCAGCAGTGTC CCGCTTGGATCAAGTTTTGTCGGTTTGACGAGGTAAGTTGGGACCCTTCT CATTGATAGAGATGTTAGGGAGACAAGAGAACAAATATTCACTTAACAAG CTAAGTATATCGCAAAGATCTTGTTATATGCATGCACAAATAATTTCTTT GAGGGCACATGTTCATGTCAAGGAACATGTTGATGGAGCTTCAACCACAA CGATCTAGGTGCGAACTGTACATTATGGGTCCCTGCGGCATCCTTAGGCT TAACCTGGGTGTTAGGAACAATCAAGAGCCCCATTCACCACTACTCCATC TTTTCATTGCACTCGCCTCCCCCGCACGTAAAGGTTGGTCCCCCCTTACG GCAGATACTCCTATTCAACGTATCCCCAGGACCTGTCTTGTGCATGTCCA GTTCGTGCCAGATAATGCTGAATCACCAGCGAGCGCGGGATTGGGCGATT CTTCAGTACTAGAGAGACGTCTTTACTCTAGATCCGAAAGCGGCTGCCTT GATAAGGACGCTGAGATTCGACCTCGGGCGTTGCTAGCCCTGCCATGGAG GAACTTTGAATTGGACTTCGGCGGAGGAGGACTGCTCATCAGGGATATCC CCCTCTTCATCAGAGACGTTTCTAACTCTGAGGAGGGGACAGGCTTCTTC ACATGGGTGTGTGTGCTCTATCGTAGGATAGCTTTGGGGCAGAGTGGGGT TTGAGTATGATACCTCACTACACCTTGCAAAGTATATTGCGTAAGGATGT GTTGGACTGAAGTGTTGCATGTAGGATTCAGACTGCATTACTACTGAACA TGAGCCTTATTTTATAATAGAGTAGGTATTATAAGTATTAAATAGAATGG ACTTTGTTGGGGATTTTAACAATGCTGAAATACGGTATTCAGGGGCATGG AGTAAGATTGAATTGGTAAGAGGTTGCACCTGAGCGTTGAATGTTGGTAG CACATTAAGCAATTGTGTCACAAGGTCATGTATCACCTATGTAGCTCAGT GTGGATCACCTGATGAAGTATTTGACGTCACATTAGGTGATTTGTCTGTT TCTGGTTGCTAAGTACCATCCCTCCACTTGCCTACCTTCAACCTCCATCT CCCCGCCACCTCATTGCCTTTGTGCCCTAGGATGGTGCTGTGATGCTGGC AAAATACTTAGAGCACACAACCCCTCTTGTGCCCTTCACTTCGGGCAAAG AACTTTCACCCCCTGAAATGGTATGGCAAGGACCATCTCAGGGAGAGCAG GTCCAGGAGGGGGTCCTGAGAGGAGGAGAGAGACAATGGTGGAGGTGTCA GCGACAGCAGTATCCCCGTGTACTGGAGCTGGGATGTGGGACCGGTCTTG CTGGACTGTCAGCAGCAGCCTTGGGGGCACGAGAGGTGATCCTGTCCGAC CTTCTTTATGCCCTGGACAACACTAGGGCCAATGTTTACCGGAACCGGAC TTTCTTACGCACAGAGGAAGAAGATGAGGGGGGAGGGTCGGGGGGAGGGG AAGAAGAGAGCACAGGGCAGGAAGGGCGTGGTGTTGTGAGGGTGAGGGAG CTTGATTGGCGAGAACCTCTCCCGTTGGATCTGATGGGTGAGTCAATACC TCTATGTACATCTCCTGTGGAAAGAGTTGTTTGCCCTTATCTATACATGA ATACTTGTGTACTTTTGAACATAGTGCATGGGTACATAGTTGTGTGTGCA TAGTACATAGTATGTATTTATGTGTGTAGAAAAAATATGTTGGCGAATTA CTGTCAAAATGTGTAGAGTGGGACTGTCAAGTAGTGTGTCTTTGTTGAGT AGATGTAGTTACGTGTGTGTGTATGCATGCATGTATTTAGTGTAAACAAT TAGGCATGGGGAGTTGATGACCCCCTCATGCATCCTGATTCTAGTTTTGT ATCTGCAATGACGTCCCCGACCCCAAACCCCCTGCTTTCTTTGTTCCTGT TGAAACCTGAATGGACAGGAAATTAATACACCAATTGTAGGAAGTAGATG CGATGCATACCATACTATTATATATATTTTTTCGGTTACCCCAACTGGAT GGTGCCAGGAAATGAGAGGAGGGTTTGGAATATATAATGGTGCAACCTTT CCATCCAGCCTAACCCTCTGCCCTAATTTTCTTTTTTTCCAAGTCAGATG GTGGAGAGTTTGATCTTGTTCTAGCTGCAGATGTGGTCTGGCTGGATGAC CTGGTCCTTCCCTTGGTGGAGACCCTGGAGCGTGTGACAGAGGGCTGGGT CAAGCAAGGGATTAATGCTGCGAGTCACATAGCTGGGGCAGCTGCTGCTA AGGTGGATCGAGAAGGGGATGTGTGCAGAATGGGAGATTGGGGGGAGGTG ATGAAGGGAGAGGGAGGGCATGGGGATGAATGTGAAAGGAGAGATAGGCG GGAGGTCCTCTTGGCATATCAGTGGCGCAGTTCTAAGACAGGGAAGACAT TACTGGAGGCTCTAGGGAGGAGCTTCAACGTGCAGGAGGTGCCCCCTGAG GTGTGTATGTAGCTGTGTGCCTGTGATTGAAAGGGGTAGGTTTGAATGTG TTTGTAGGCCTGTATTTGAGGGATTTGCTTATATATGGTCCTGGTGTAGT CATTAGTCGACTCGGCCTCAGTACTGCAAGGCAGTCAATCATATCACATA CTCCAAGCCCACTTAGGGGTAGTCCTTGCAGGAGTAGACTGTGGTTTACA GTGTGTGCAGTTCAGTACCGCTTAGGAAAGACCTTTAGACGGTATTAATG AATGATTGTGGAGTGTAAGATTGACTGAATGGGTTGAGTGTTCTCTCTCT TTTGAGGGAGCTCGCTGGAGCTGGCTTCCGTACAGCGAGGTCGAAACCTC TGCATCGAGAGGATTGAAGGAACCTAGGTTTTGTCACGAAGTAAGCATGG TGAAAGTGTGATGGAAAAGGGATGCGCACCTAGCAGGTCTGTCCATGGAT GAGTGTTACTACCCCGTGGAACAGGTGCCGAACCATGTTATACCTGTTTC TACCCTGGAGGCGTTGTTATGAGAAAGGGTGCGGAGGTGTTTTGGACGGT TATCCCCTGTATGAGGAGCAAGTTCTGAGAAAGGAGAGCATGGGAATATT GATTTGAGGGTTGTCAAAACCGACCTCAAGAACGGTGTGGACGAGGGCAT TGTATAGATACTGGTGAACCGTGTGTGGAAGTACAAGCAGACCACTGAAG CAGAAGGTCGACGTTCTGCTGACCCCCGAGGTGGGTAGGGTCCCTGGTGA AGATTGGTTGCTGAACCTGGTGGAGATTTTGAGGCCTGCTTGGTCAGGCT GACCAGGATGGGAAGCACCTCCGCCAGGGACCCGGGTTTGCCGTTAGAGT CGCTGTGGAGGTGTTCATGTAGACAGCCACCTGGACAGGCTTTTTGGATA TATTGTTAGTTAAGAGATGGAGAGTTGGAAAATGGAGCCGGTCAGGTGGT TGACTAGGGTGATACTGTGAGTGTTGAAGGGCTCCAGAGATTTGGCTGTG GGTGTTGCTCAAGGTGCAATTTCAAATGGATATGAAGAGATCATCCTGTA GACTTCTTTTGACTCCATCTTCAACCACATAAAGAAGTGGGTTGTCTACA AGGGTGCTGTGGTGTAATTGCCCAAAGATGGAAGGTTTGGTGCTGAGCAA GGGCTGGGCAAGTCACCCGATGGGCTCACGGGGTCTCGGTACGGAGCAGG CTGGTAGGAATGTTCTGTATCGGTGGGAAGATGGTTTGATTAATATTTTG TGTGATTTATGTGTTAAGGAGTGTCAAATCGAGGTTAAGTATTGGTCGTA TGTTGTTTGTTGTGGTGTCTCCTCAGTAGCATAAACAACAGCAATTTGTT GGTATGAAATGAGGTTTTGCTTGTCCTGTCTGCCGTTTTTGGCGCGCACA CATGCCAAACACCAAGCTTTCCATCAAAGCCGTGAGCCGAATCTGGCGGG CGTTGGCTGCAATGATCGTGGTTTTGGGGATACGACTCTTTTGCTGCAAA GTAGGGGACCCTGGAAGGTCGCTATCATCCTCATGCAGAAACACCCTATC CCTTTCCCCATCAGCCATCACGAAAAACCAGGTTTCATCCACATGGACCG TGTTTGCCATGGAGGCGTACACACCACAATTCCAGTCCATTTGATCGCAA ATGAAGTCCATTCTCTGTACCTTTTGCCACGGTTGAAGCTTGGGTTTGAT CCAGCGGCAATTCGGCATAGCCCCCATATCATCCAACCACCTGTTTATGG TGCTCGTGATATAATTCAAGGAGAATAGATACAGTAACATGAGCTTCCTA GTGTTGGACTGTTAAGAGCACAGGTTGTGTTGTTATGTTAATGCAGAC
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Coding sequence (CDS) from alignment at C-tenellus_contig1005:9277..14124+

>mRNA_C-tenellus_contig1005.4.3 ID=mRNA_C-tenellus_contig1005.4.3|Name=mRNA_C-tenellus_contig1005.4.3|organism=Choristocarpus tenellus KU2346|type=CDS|length=1353bp|location=Sequence derived from alignment at C-tenellus_contig1005:9277..14124+ (Choristocarpus tenellus KU2346)
ATGACGACATACACCATAGTGCTTGAGGTCGAGGGTTCGGACCATCGAGA
GACGGAGAGGATACGATGGAGGGGACACGTATTCCCCTCTGTGTCTAGTG
GCGCCCTGGTGGACAGCCTCGTGATGCATCTTGACAAGCATTTTTCTAGA
CTCCGCGAGTTTGGTGAGGGGCGAGGTTACTTGATGCAATTCTACCACAA
CGACGAAGGTTGGTCCCCCCTTACGGCAGATACTCCTATTCAACGTATCC
CCAGGACCTGTCTTGTGCATGTCCAGTTCGTGCCAGATAATGCTGAATCA
CCAGCGAGCGCGGGATTGGGCGATTCTTCAGTACTAGAGAGACGTCTTTA
CTCTAGATCCGAAAGCGGCTGCCTTGATAAGGACGCTGAGATTCGACCTC
GGGCGTTGCTAGCCCTGCCATGGAGGAACTTTGAATTGGACTTCGGCGGA
GGAGGACTGCTCATCAGGGATATCCCCCTCTTCATCAGAGACGTTTCTAA
CTCTGAGGAGGGGACAGGCTTCTTCACATGGGATGGTGCTGTGATGCTGG
CAAAATACTTAGAGCACACAACCCCTCTTGTGCCCTTCACTTCGGGCAAA
GAACTTTCACCCCCTGAAATGGTATGGCAAGGACCATCTCAGGGAGAGCA
GGTCCAGGAGGGGGTCCTGAGAGGAGGAGAGAGACAATGGTGGAGGTGTC
AGCGACAGCAGTATCCCCGTGTACTGGAGCTGGGATGTGGGACCGGTCTT
GCTGGACTGTCAGCAGCAGCCTTGGGGGCACGAGAGGTGATCCTGTCCGA
CCTTCTTTATGCCCTGGACAACACTAGGGCCAATGTTTACCGGAACCGGA
CTTTCTTACGCACAGAGGAAGAAGATGAGGGGGGAGGGTCGGGGGGAGGG
GAAGAAGAGAGCACAGGGCAGGAAGGGCGTGGTGTTGTGAGGGTGAGGGA
GCTTGATTGGCGAGAACCTCTCCCGTTGGATCTGATGGATGGTGGAGAGT
TTGATCTTGTTCTAGCTGCAGATGTGGTCTGGCTGGATGACCTGGTCCTT
CCCTTGGTGGAGACCCTGGAGCGTGTGACAGAGGGCTGGGTCAAGCAAGG
GATTAATGCTGCGAGTCACATAGCTGGGGCAGCTGCTGCTAAGGTGGATC
GAGAAGGGGATGTGTGCAGAATGGGAGATTGGGGGGAGGTGATGAAGGGA
GAGGGAGGGCATGGGGATGAATGTGAAAGGAGAGATAGGCGGGAGGTCCT
CTTGGCATATCAGTGGCGCAGTTCTAAGACAGGGAAGACATTACTGGAGG
CTCTAGGGAGGAGCTTCAACGTGCAGGAGGTGCCCCCTGAGGTGTGTATG
TAG
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