mRNA_C-tenellus_contig1005.4.3 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig1005.4.3 vs. uniprot
Match: D8LDR8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDR8_ECTSI) HSP 1 Score: 206 bits (524), Expect = 8.740e-53 Identity = 189/592 (31.93%), Postives = 242/592 (40.88%), Query Frame = 1 Query: 49 TYTIVLEVEGSDHRETERIRWRGHVFPSVSSGALVDSLVMHLDKHF-----------SRLREFGEGRGYLMQFY----HNDE--GWSPLTADTPIQRIPRTCLVHVQ-FVPDNA----------ESPASAGLGDSSVLERRLYSRSESGCLDKDAE---------------------------IRPRALLALPWRNFELDFGGGG---LLIRDIPLFIRDVSNSEEGTGFFTWDGAVMLAKYLEHTTPLV--PFTSGKELSPPEMVWQGPSQGEQVQEGVLRGGERQ-------------------------WWRCQRQQYPRVLELGCGTGLAGLSAA-ALGARE---------------------------------------------VILSDLLYALDNTRANVYRNRTFLRTEEXXXXXXXXXXXXXSTGQEGRGVVRVRELDWREPLPLDLMDGGEFDLVLAADVVWLDDLVLPLVETLERVTEGWVKQGINAASHIAGAAAAKVDREGDVCRMGDWGEVMK-GEGGHGDECER---------RDR----REVLLAYQWRSSKTGKTLLEALGRSFNVQEVPPEVC 1389 ++T V+E++ E ER+RWR ++ + L+ L KHF + E G + Y H+ GW+PL+ T + IPR C V V F A E P+S+ G+S + L + SG ++A + P +LALPWR F+ D GG G L I + IRDVSNS EGTG FTWDGAV+LAKYLEH + F + + ++ P + G+ R RVLELGCGTGLAGL+AA A G R V+L+DL YAL N RAN + N + L + G E + ELDW PLP +L D FDL+LAADVVWLDDLV PLV TLER+T GW G++A S A A +E R + G G G ECE R R R VLLAYQWRS +TG+ LLE LG F V+E+P E C Sbjct: 19 SHTFVIEIDRQGAPEQERLRWRWRDSLGDNTAGVAQDLLSFLQKHFRAPAGSTPTTTAPAGERASGDQQDVDLYSVEVHDPARGGWTPLSVSTSSETIPRNCRVRVNIFAKPQATTTRCRQTTTEDPSSSSDGNSC---KNLSASLPSGPARRNATFDGTAVPGAATTVDGTPLPEDESSLDPVAPGEMLALPWRRFDKDLGGEGEEGLKICGNRVAIRDVSNSSEGTGLFTWDGAVLLAKYLEHRAVAMRRDFCEQQPCHSTQPSYRHPEGAGHGSSVTVAAGDSADVXXXXXXXXXXXXXXXXXXXXXXXXXXXVRAAPIRVLELGCGTGLAGLAAAFAFGRRHSGTSGDDNSEVNHPPPPSPCRRRNPLEGENDEGVAQCASPPAQVAVVLTDLEYALTNARANTFLNSSSLE----------------AVGAEVSSI----ELDWCRPLPRELSDKEAFDLILAADVVWLDDLVTPLVRTLERLTAGWPGGGVDAWSAPLPPAPANGTQEE---RRNETGLAASFGSGASPQECELGGCAARSGGRPRPPAGRRVLLAYQWRSERTGRALLEELGACFCVREIPAEEC 584
BLAST of mRNA_C-tenellus_contig1005.4.3 vs. uniprot
Match: W7T984_9STRA (Nicotinamide N-methyltransferase, putative n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T984_9STRA) HSP 1 Score: 134 bits (338), Expect = 1.210e-29 Identity = 116/342 (33.92%), Postives = 161/342 (47.08%), Query Frame = 1 Query: 442 RALLALPWRNFELDFGGGGLLIRDIPLFIRDVSNSEEGTGFFTWDGAVMLAKYL--EHTTPLVPFTSGKELSPPEMVWQGPSQGEQVQEGVLRGGERQWWRCQRQQYPRVLELGCGTGLAGLSAAALGAREVILSDLLYALDNTRANVYRNRTFLRTEEXXXXXXXXXXXXXSTGQEGRGVVRVRELDWREPLPLDLMDGGEFDLVLAADVVWLDDLVLPLVETLERVTEGWVKQG---------INAASHIAGAAAAKVDREGDVCRMGDWGEVMKGEGGHGDECER-----------RDRRE-----VLLAYQWRSSKTGKTLLEALGRS-FNVQEVPPE 1383 + +LALP R F LD G G+ + D +F++ V+NS GTG TWDGAV+L+KYL +HT T+ + + ++ L+G +V+ELG GTGL GLS A LGAREVIL+DL YAL+N NV RN R G+E G V V E DW +P L++G D+V+AADVVWLD+LV PL L + G ++G I+ +S + G +A V + G GE G G + R+E +AYQ RS++T L+ + + V+EVP E Sbjct: 148 KPVLALPGRRFPLDLDGEGIPVLDTRIFVKGVANSGLGTGLTTWDGAVVLSKYLIKQHTH----ATARSQAPTFDFEFE-----------FLKG-------------KKVVELGAGTGLVGLSCAVLGAREVILTDLPYALENLNDNVRRNVGAWR---------GLVQGPPGVGRE-EGRVAVEEGDWLQPPASSLVEG--VDVVVAADVVWLDELVPPLGRYLATILMGGGREGGKGGERKRQISESSPVGGPSAGMVVPGLERPGKGGNETAESGEEGSGXXXXXXXXXXXXXGNPKSRKEWNFPVCFMAYQSRSAQTDALLMATMRQEGLVVEEVPAE 449
BLAST of mRNA_C-tenellus_contig1005.4.3 vs. uniprot
Match: A0A6H5L4A1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4A1_9PHAE) HSP 1 Score: 125 bits (313), Expect = 2.590e-29 Identity = 73/144 (50.69%), Postives = 84/144 (58.33%), Query Frame = 1 Query: 991 ELDWREPLPLDLMDGGEFDLVLAADVVWLDDLVLPLVETLERVTEGWVKQGINAASHIAGAAAAKVDRE------GDVCRMGDWGEVMKGEGG-HGDECERRDR----REVLLAYQWRSSKTGKTLLEALGRSFNVQEVPPEVC 1389 ELDW PLP +L D FDL+LAADVVWLDDLV PLV TLER+T GW G++A+ AAA +E G R G K EGG R R R VLLAYQWRS +TG+ LLE LG F V+E+PPE C Sbjct: 2 ELDWCRPLPRELSDKEAFDLILAADVVWLDDLVTPLVRTLERLTAGWPSGGVDASPAPLSPAAANGTQEEQRNETGLAARFGSGAVPQKCEGGGRAARSVGRSRPSAGRRVLLAYQWRSERTGRALLEELGACFRVREIPPEEC 145
BLAST of mRNA_C-tenellus_contig1005.4.3 vs. uniprot
Match: A0A2D4BQT1_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BQT1_PYTIN) HSP 1 Score: 117 bits (293), Expect = 1.840e-25 Identity = 84/237 (35.44%), Postives = 111/237 (46.84%), Query Frame = 1 Query: 451 LALPWRNFELDFGGGGLLIRDIPLFIRDVSNSEEGTGFFTWDGAVMLAKYLEHTTPLVPFTSGKELSPPEMVWQGPSQGEQVQEGVLRGGERQWWRCQRQQYPRVLELGCGTGLAGLSAAALGAREVILSDLLYALDNTRANVYRNRTFLRTEEXXXXXXXXXXXXXSTGQEGRGVVRVRELDWREPLPLDLMDGGEFDLVLAADVVWLDDLVLPLVETLERVTEGWVKQGINAASH 1161 LALP R F++D GG I+D + + +V NS GTG TWDG+V+LAKYLEH F GK RVLE+G GTGL G+SAA LGA +V+L+DL Y + N + N+ N T E ++ + + + LDW P D G DL+LA+DVVW+ DL+ PLV TL ++ QGI SH Sbjct: 40 LALPARLFDVDTLSGGFKIKDRAVVVGEVENSGLGTGLTTWDGSVVLAKYLEHKYSA--FMQGK---------------------------------------RVLEVGAGTGLVGISAALLGATDVVLTDLEYVVANLQKNI--NMTLAAAE--------------ASAKPVDARISAQVLDWFNPRT----DFGRVDLILASDVVWVKDLIPPLVNTLRQLAH---PQGIILLSH 212
BLAST of mRNA_C-tenellus_contig1005.4.3 vs. uniprot
Match: A0A8K1CNV0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CNV0_PYTOL) HSP 1 Score: 115 bits (288), Expect = 2.740e-24 Identity = 81/226 (35.84%), Postives = 109/226 (48.23%), Query Frame = 1 Query: 451 LALPWRNFELDFGGGGLLIRDIPLFIRDVSNSEEGTGFFTWDGAVMLAKYLEHTTPLVPFTSGKELSPPEMVWQGPSQGEQVQEGVLRGGERQWWRCQRQQYPRVLELGCGTGLAGLSAAALGAREVILSDLLYALDNTRANVYRNRTFLRTEEXXXXXXXXXXXXXSTGQEGRGV---VRVRELDWREPLPLDLMDGGEFDLVLAADVVWLDDLVLPLVETLERV 1119 LALP R F +D G I + + +V NS GTG TWDG+++LAKYLEH F +G+ L G RVLE+G GTGL G+SA LGA +V+L+DL Y +DN NV TGQ + + V+ ELDW +P D G+FDL+LA+DVVW+++LV PLV+TL+ + Sbjct: 101 LALPSRLFPVDTTQGEFQINGHAVLVGEVENSGLGTGLTTWDGSIVLAKYLEHR-----FGNGQ----------------------LHG-------------KRVLEVGAGTGLVGISAGLLGAEQVLLTDLAYTMDNLARNV-----------------------ELTGQHAQQIKARVQPVELDWFQPRS----DLGDFDLILASDVVWVEELVRPLVQTLQTL 259
BLAST of mRNA_C-tenellus_contig1005.4.3 vs. uniprot
Match: A0A418B4Q7_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418B4Q7_9STRA) HSP 1 Score: 112 bits (281), Expect = 3.770e-23 Identity = 77/238 (32.35%), Postives = 111/238 (46.64%), Query Frame = 1 Query: 415 LDKDAEIRPRALLALPWRNFELDFGGGGLLIRDIPLFIRDVSNSEEGTGFFTWDGAVMLAKYLEHTTPLVPFTSGKELSPPEMVWQGPSQGEQVQEGVLRGGERQWWRCQRQQYPRVLELGCGTGLAGLSAAALGAREVILSDLLYALDNTRANVYRNRTFLRTEEXXXXXXXXXXXXXSTGQEGRGVVRVRELDWREPLPLDLMDGGEFDLVLAADVVWLDDLVLPLVETLERVTEG 1128 L ++ + +LA+ R+F F G + +PL+I +V N+ +GTG WDG+V+LA+YLEH V + G + + +RG RVLELG GTGL GL+A+ GA V L+DL YAL+N NV NR G V V ELDW P DG D+V+ +D+VW++ L+ PLV+T+ + +G Sbjct: 109 LSPSSDTASQPVLAIASRSFGFAFERGEFRVHGVPLYIGEVGNTGKGTGLTIWDGSVVLARYLEH----VSLSVGHDDN-------------------VRG-------------KRVLELGAGTGLVGLAASLCGASHVTLTDLAYALENLSRNVELNR----------------------GAISPAAVAVSELDWFAPQSSSFTDG--VDMVVGSDIVWVESLIEPLVQTIAVLLKG 286
BLAST of mRNA_C-tenellus_contig1005.4.3 vs. uniprot
Match: A0A484EDE5_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EDE5_BRELC) HSP 1 Score: 112 bits (281), Expect = 4.130e-23 Identity = 86/251 (34.26%), Postives = 115/251 (45.82%), Query Frame = 1 Query: 367 SSVLERRLYSRSESGCLDKDAEIRPRALLALPWRNFELDFGGGGLLIRDIPLFIRDVSNSEEGTGFFTWDGAVMLAKYLEHTTPLVPFTSGKELSPPEMVWQGPSQGEQVQEGVLRGGERQWWRCQRQQYPRVLELGCGTGLAGLSAAALGAREVILSDLLYALDNTRANVYRNRTFLRTEEXXXXXXXXXXXXXSTGQEGRGVVRVRELDWREPLPLDLMDGGEFDLVLAADVVWLDDLVLPLVETLERV 1119 S + ERR SR + DA LALP +NF G + I +FI +V+NS +GTG TWDG+V+LAKYLEH + + G RV+ELG GTGL G++AA LGA +VILSDL Y +DN NV G+ V V LDW +P P DL G+ D++LA+DVVW+++L+ PLV T + + Sbjct: 103 SQLGERR--SRLSITLANADAVFPGHTCLALPSKNFTDIAGDNKIEIDGRVVFISEVANSGKGTGLTTWDGSVVLAKYLEHN----------------------------RHSGIAGS-------------RVVELGSGTGLVGIAAAILGANQVILSDLPYVVDNLAKNVAET----------------VKLAARIGRPIESEVSVEVLDWFKP-PTDL---GDIDILLASDVVWVEELIPPLVATFDTL 290
BLAST of mRNA_C-tenellus_contig1005.4.3 vs. uniprot
Match: A0A7S2U3H9_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2U3H9_9EUKA) HSP 1 Score: 108 bits (270), Expect = 1.390e-22 Identity = 97/304 (31.91%), Postives = 131/304 (43.09%), Query Frame = 1 Query: 472 FELDFGGGGLLIRDIPLFIRDVSNS-EEGTGFFTWDGAVMLAKYLEHTTPLVPFTSGKELSPPEMVWQGPSQGEQVQEGVLRGGERQWWRCQRQQYPRVLELGCGTGLAGLSAAALGAREVILSDLLYALDNTRANVYRNRTFLRTEEXXXXXXXXXXXXXSTGQEGRGVVRVRELDWREPLPLDLMDGGEFDLVLAADVVWLDDLVLPLVETLER-VTEGWVKQGINAASHIAGAAAAKVDREGDVCRMGDWGEVMKGEGGHGDECERRDRREVLLAYQWRSSKTGKTLLEALG-RSFNVQEV 1374 F LDF G L I+ PL +R+++NS +GTGF WDG+V+LAKYLEH+ ++G V+ELG GTGL GL+AA LGA+ V L+DL Y L N +AN+ N L + G + LDW P D ++A+DVVW+D LV+PLV TL VTE H A+ + + VC+ + K D + + VLLA+Q RS T K L + L R F + EV Sbjct: 3 FPLDFASGELKIKGSPLLVREIANSGTDGTGFNIWDGSVVLAKYLEHSL----------------------------SAAMKGAS-------------VVELGSGTGLVGLAAAMLGAKAV-LTDLPYTLKNIKANIKANGRDLASHG--------------------GEANAQTLDWTTPRKHAKSLPKHIDFIIASDVVWVDWLVIPLVNTLHYLVTE-----------HNQKASDDEQAPKPRVCQ------IKKSPSSRTD-AKNAGKPLVLLAHQTRSLATDKHLWKLLNNRGFRIAEV 226
BLAST of mRNA_C-tenellus_contig1005.4.3 vs. uniprot
Match: A0A6G0XKE4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XKE4_9STRA) HSP 1 Score: 110 bits (275), Expect = 1.910e-22 Identity = 72/224 (32.14%), Postives = 104/224 (46.43%), Query Frame = 1 Query: 448 LLALPWRNFELDFGGGGLLIRDIPLFIRDVSNSEEGTGFFTWDGAVMLAKYLEHTTPLVPFTSGKELSPPEMVWQGPSQGEQVQEGVLRGGERQWWRCQRQQYPRVLELGCGTGLAGLSAAALGAREVILSDLLYALDNTRANVYRNRTFLRTEEXXXXXXXXXXXXXSTGQEGRGVVRVRELDWREPLPLDLMDGGEFDLVLAADVVWLDDLVLPLVETLERV 1119 +LA+ R+F+ F G + D PL+I++V N+ +GTG WDG+V+LAKYLE T+ GK RVLELG GTGL GL+AA GA EV ++DL Y L+N AN+ N L T VV ELDW D + D+++ +D+VW++DL+ PLV+++ ++ Sbjct: 116 ILAIASRSFDYAFDKGEFKVLDKPLYIQEVGNTGKGTGLTIWDGSVVLAKYLESTSNPSHNVQGK---------------------------------------RVLELGAGTGLVGLAAAFCGASEVTITDLAYTLENVDANIRANAEALSTS----------------------VVSTHELDWFAKDIPDSLRVQTVDILVGSDIVWVEDLIPPLVDSIAKL 278
BLAST of mRNA_C-tenellus_contig1005.4.3 vs. uniprot
Match: A0A0W8DVN1_PHYNI (Lysine methyltransferase METTL21D protein n=10 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DVN1_PHYNI) HSP 1 Score: 110 bits (275), Expect = 2.950e-22 Identity = 81/233 (34.76%), Postives = 107/233 (45.92%), Query Frame = 1 Query: 424 DAEIRPRALLALPWRNFELDFGGGGLLIRD-IPLFIRDVSNSEEGTGFFTWDGAVMLAKYLEHTTPLVPFTSGKELSPPEMVWQGPSQGEQVQEGVLRGGERQWWRCQRQQYPRVLELGCGTGLAGLSAAALGAREVILSDLLYALDNTRANVYRNRTFLRTEEXXXXXXXXXXXXXSTGQEGRGVVRVRELDWREPLPLDLMDGGEFDLVLAADVVWLDDLVLPLVETLERV 1119 DA LALP R F LD G + D + I ++ NS +GTG TWDG+V+LAKYLE+ + + G RV+ELG GTGL G+SAA LGAR+VILSDL Y +DN N+ STG+ V + LDW P P DL G+ D +LA+DVVW+++L+ PLV T + + Sbjct: 123 DALFPDHTCLALPSRIFGLDVAAGDKFVIDGRVVHIGEIGNSGKGTGLTTWDGSVVLAKYLEYQ----------------------------RRSDIAGS-------------RVVELGAGTGLVGISAALLGARQVILSDLDYVVDNLARNMAETMKLAA----------------STGRPVESDVSTQVLDWFNP-PTDL---GDVDFLLASDVVWVEELIPPLVATFDTL 294 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1005.4.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig1005.4.3 >prot_C-tenellus_contig1005.4.3 ID=prot_C-tenellus_contig1005.4.3|Name=mRNA_C-tenellus_contig1005.4.3|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=451bp MTTYTIVLEVEGSDHRETERIRWRGHVFPSVSSGALVDSLVMHLDKHFSRback to top mRNA from alignment at C-tenellus_contig1005:9277..14124+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig1005.4.3 ID=mRNA_C-tenellus_contig1005.4.3|Name=mRNA_C-tenellus_contig1005.4.3|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4848bp|location=Sequence derived from alignment at C-tenellus_contig1005:9277..14124+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig1005:9277..14124+ >mRNA_C-tenellus_contig1005.4.3 ID=mRNA_C-tenellus_contig1005.4.3|Name=mRNA_C-tenellus_contig1005.4.3|organism=Choristocarpus tenellus KU2346|type=CDS|length=1353bp|location=Sequence derived from alignment at C-tenellus_contig1005:9277..14124+ (Choristocarpus tenellus KU2346)back to top |