mRNA_C-tenellus_contig10044.1.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig10044.1.1
Unique NamemRNA_C-tenellus_contig10044.1.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig10044.1.1 vs. uniprot
Match: D7FLD2_ECTSI (DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLD2_ECTSI)

HSP 1 Score: 472 bits (1215), Expect = 1.870e-150
Identity = 299/660 (45.30%), Postives = 395/660 (59.85%), Query Frame = 2
Query:   95 MPNDNVYLIQGYSVSFPSGKKPFPSQFAVMSKMLLGLRQGKNCLLESPTGTGKTLALLCSALAWQRQQRLDLADSKEEIEEDEKSSIKSIDTERKGESIIDNVSYRGGQDTNP--QVGPSQISRSGPIELDYECEMNTQKTAGLEQTNKDTKGILSDIFSDDDV-----FEDAKKRRKKTXXXXXXXKYRVKEEKCIEGLDNVEGADTVQDCQPDSSGSTQSSTVQRKIQQEEGANMTPSRMEEESDLGDGKDDGKINTSVGVDIKSKASEVVKE-KKKKVPRVFFCSRTHSQLGQVVAELRTCETALGQVSVAEVGSDQDPFSMTLLSSRKNACIHKTAMKNDKGVDEACKSLLKENSCAYFRRSKSMAKLLPQVWDVEDIVRLGKENHACPYYAARESLYNADLVFCPYNYLVDPVVRDIMGISLKNSVVIFDEAHNLESAAREAASANLSSWALSDAVTQLKSLSKKGLVLDWAYNRLIPMVEGVRDFLLEAEENLTNSGYEQAHKIYSGEQALGLMHSRAGVTPESLPGLKEALNRIATDDPRADSTGNPDEDHI--------ESTLSSGAVLVVSSLLTVLGFLVSGNSMENVPHYRMVVLKERLRW----GQGR-GRRKEGQGSMQGGGLRMQTLLCFWCLSAGVCFAKINDLV 2011
            M  +N+ +I+G+ VSFP G+KPF  Q A+MSK+L+G+++G+NCLLESPTGTGKTLALLC+ALAWQRQQR            ++  + ++ D E + E +ID   +   +  N    V P ++ +  PIEL YE  +   K        ++  G  +  + D D      FE  KK+R+K           V+EE     +D+ E +D                   R   Q+   +  P    +E +LG  K   +  T   V  K +   V +E ++K+ PRV+FCSRTHSQL QVVAELRTC TA    S   +G D  PFSM LL+SRK+ CI++ A  + KG+D+ACK LLKE +C Y+RR+K     LP VWDVE+ VR+G+EN ACPYY AR SL NADLV CPYNYLVDP VR+IMGI+LKN+VVIFDEAHNLE +AREAASA LS  AL++A  ++  L  K L L  +Y+ L  ++ GV+ FL E +  LT   YE+AHK+Y G +ALGLM SRAGVT ESL  LKEAL  +  +D  AD       D          +  LSSG+V V +SL+ VLGFL++   MENV HY+MVVL+ER  W     +GR GR + G GS+      M+T LCFWC SA  CF++I+  V
Sbjct:    1 MEEENIIMIRGFPVSFPKGRKPFAPQLALMSKLLVGVQKGENCLLESPTGTGKTLALLCAALAWQRQQR------------EQGVAAETSDCESEEEPMIDLGPHEPLRSFNDFRYVEP-KVQQQAPIELAYEDAVEPGK-------QEEPAGDRTSFYDDYDXXXXXXFESPKKKRQKNKD--------VEEE-----IDSPENSDA----------------PHRDSHQDSPDSPVP----DEPNLG--KPPSEAVTPDDVKPKKRGKAVKQEARRKRAPRVYFCSRTHSQLNQVVAELRTCRTAFQDTSAVGIGDDGKPFSMALLASRKSTCINREACSDPKGIDDACKRLLKEKACTYYRRAKWAQTKLPPVWDVEEAVRMGQENQACPYYTARASLVNADLVLCPYNYLVDPGVREIMGINLKNAVVIFDEAHNLEDSAREAASAKLSLRALANAAGEMHRLGAKSLSLSPSYDLLRGVIIGVQAFLEEEDSRLTIGSYEKAHKVYKGAEALGLMQSRAGVTSESLVYLKEALKMVINEDGNADPYARDQADGASFDHRLGGDEVLSSGSVHVTASLVKVLGFLLT-EGMENVDHYKMVVLRERGPWEPVSSRGRRGRNRPGSGSITA----METYLCFWCQSASTCFSEIDKQV 600          
BLAST of mRNA_C-tenellus_contig10044.1.1 vs. uniprot
Match: A0A662WP93_9STRA (Helicase ATP-binding domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WP93_9STRA)

HSP 1 Score: 270 bits (691), Expect = 2.480e-75
Identity = 191/658 (29.03%), Postives = 330/658 (50.15%), Query Frame = 2
Query:   98 PNDNVYLIQGYSVSFPSGKKPFPSQFAVMSKMLLGLRQGKNCLLESPTGTGKTLALLCSALAWQRQQRLDLADSKEEIEEDEKSSIKSIDTERKGESIIDNVSYRGGQDTNPQVGPSQISRSGPIELDYECEMNTQKTAGLEQTNKDTKGILSDIFSDDDVFEDAKKRRKKTXXXXXXXKYRVKEEKCIEGLDNVEGADTVQDCQPDSSGSTQSSTVQRKIQQEEGANMTPSRMEEESDLGDGKDDGKINTSVGVDIKSKASEVVKEKKKKVPRVFFCSRTHSQLGQVVAELRTCETALGQVSVAEVGSDQDPFSMT-LLSSRKNACIHKTAMKNDKGVDEACKSLLKENSCAYFRRSK---SMAKLLPQVWDVEDIVRLGKENHACPYYAARESLYNADLVFCPYNYLVDPVVRDIMGISLKNSVVIFDEAHNLESAAREAASANLSSWALSDAVTQLKSLSKKGLVLDWAYNRLIPMVEGVRDFLLEAEEN----LTNSGYEQAHKIYSGEQALGLMHSRAGVTPESLPGLKEALNRIATDDPRADSTGNPDEDHIEST----------------LSSGAVLVVSSLLTVLGFLVSGNSMENVPHYRMVVLKERLRWGQGRGRRKEGQGSMQGGGLRMQTLLCFWCLSAGVCFAKI 1999
            P ++  ++ GY+V+FPSGKKPFP+Q AVM+K+L+ L+ G++ LLESPTG+GKTLALLCS+L +Q+Q   +   + EE+E  ++     ++ E+   ++    S  G ++T      S     G  + D+  + +  K                  F  D +    KK +K++                 +  D +E AD  +             T ++++       +  S      D G  +            +K+    +  + +   PR++FCSRTHSQL QVV EL++C  +   +   E G+       T +L S++N C++    ++   VDE C+  L+  SC++FR+ K    + ++ P VWD+ED+V L K++  C Y+ +RE+L +A++VFCPYNYL+DP +R  +GI+LKN++++ DEAHN+E   R +AS  L++  L+ A+     + K G      YN L+ ++ G+  +L     N    L  SG+E+  K++ G  AL ++   +G+T +++  +KE +  +   +    ++G   +   ES                 L S A+  V S++ V+ ++    S + +  +++VV+K R+ W +G GR +    S  G     Q  +C WCL+A V F+ I
Sbjct:   22 PAEHKVMVMGYNVAFPSGKKPFPAQLAVMNKVLMALKTGQHALLESPTGSGKTLALLCSSLTFQKQWVQNQVAANEELERQKRK----LEAEKXXXAVTTG-SKVGNEETAXXXXXSATGDDGDEDADFCTQPSLDK------------------FKHDWISMADKKAKKRSRED-------------AKADDAMEAADATE-------------TKKKRV-------LPASFGHAAEDAGQSQP-----------VKTPGENLPAKARVAPPRIYFCSRTHSQLAQVVDELKSCPASY--LESPEAGNAYATQLQTCVLGSKRNYCVNPKVSRDATKVDENCRLALEGKSCSFFRKRKRVNDLRRVAPAVWDIEDLVALAKKHRECAYFHSREALDHANIVFCPYNYLLDPSIRAAVGINLKNAIIVLDEAHNVEDTCRSSASVELTTDVLAAAIKAFSVVIKHGS-RPTTYNMLLKLLNGINRWLQGVNSNSRAILQPSGFEEESKVWDGADALAMLAEYSGLTRDNVGAMKECVKAVREYENELSNSGEQSQQQQESAPKEGDAAANPSGASVLLGSLALSTVESIMNVVDYMFRDES-KYLDDFKLVVIKSRVPW-RGGGRFQSPNKSSNGN--EWQLKMCLWCLNAAVAFSDI 605          
BLAST of mRNA_C-tenellus_contig10044.1.1 vs. uniprot
Match: D0NXC2_PHYIT (Helicase ATP-binding domain-containing protein n=15 Tax=Phytophthora TaxID=4783 RepID=D0NXC2_PHYIT)

HSP 1 Score: 268 bits (684), Expect = 2.450e-74
Identity = 195/668 (29.19%), Postives = 336/668 (50.30%), Query Frame = 2
Query:  107 NVYLIQGYSVSFPSGKKPFPSQFAVMSKMLLGLRQGKNCLLESPTGTGKTLALLCSALAWQRQQRLDLADSKEEIEEDEKSSIKSIDTERKGESIIDNVSYRGGQDTNPQVGPSQISRSGPIELDYECEMNTQKTAGLEQTNKDTKGILSDIFSDDDVFEDAKKRRKKTXXXXXXXKYRVKEEKCIEGLDNVEGADTVQDCQPDSSGSTQSSTVQRKIQQEEGANMTPSRMEEESDLGDGKDDGKINTSVGVDIKSKASEVV----KEKKKKV--PRVFFCSRTHSQLGQVVAELRTCETALGQVSVAEVGSDQDPFSMTL----LSSRKNACIHKTAMKNDKGVDEACKSLLKENSCAYFRRSKS---MAKLLPQVWDVEDIVRLGKENHACPYYAARESLYNADLVFCPYNYLVDPVVRDIMGISLKNSVVIFDEAHNLESAAREAASANLSSWALSDAVTQLKSLSKKGLVLDWAYNRLIPMVEGVRDFLLEAEEN----LTNSGYEQAHKIYSGEQALGLMHSRAGVTPESLPGLKEALNRI--------------------ATDDPRADSTGNPDEDHIESTLSSGAVLVVSSLLTVLGFLVSGNSMENVPHYRMVVLKERLRWGQGRGRRKEGQGSMQGGGLRMQTLLCFWCLSAGVCFAKI 1999
            N ++I GY+V FP GK+PFP+QFAVM+K+L  L+  ++ LLESPTG+GKTLALLCS+L +Q+Q   D  ++  + +ED K   K ++ ++  +                     Q  ++  +  + E +  TQ T    Q  + T+     +  DDD                                        V   QP ++ S   +T +R+++ +  A +   R+  +S     KD          D+K KA ++     + KKK+V  P++FFCSRTHSQL QVV EL+ C      VS  +   D + ++  L    L S++N C+++   ++   VDE C+  L+ +SC++FR+ K    + + +P VWD+ED+V+L +++  C Y+ ARE+L +A++VF PYNYL+DP +R  +GI+LK+++++ DEAHN+E   R +AS  +++ AL+ ++     + K G      YN L+ ++ G+  +L   + N    L  SGYE+  K++ G  AL ++   +G+T ++L  +KE +  +                    A  D  A+ TG          L + A+  V S++ V+ ++   + ++ +  +++VV+K +  W +    R     + + GG   +  +C WCL+A V F+ I
Sbjct:    7 NRFMIMGYNVEFPQGKRPFPAQFAVMNKVLTALKTEQHALLESPTGSGKTLALLCSSLTFQKQFVKDKVEAHRKQQEDPK--FKELEAKKHAQXXXXXXXXXXXXXXXXXXXIEQARKARRV-TEEEADDATQTTFQPTQETQATQVAGQQLEQDDD---------------------------------------DVAPTQPSANTSAWMTTRKRELETDSTA-VKKKRVLPKSFAFAAKD---------ADVKVKAEQLDVAPDQPKKKRVVPPQIFFCSRTHSQLAQVVDELKNCP-----VSYLDSPEDSNTYTKQLQTCVLGSKRNMCVNRKVNRDPSQVDEKCRLALEGSSCSFFRKRKKTNDLKRSVPPVWDIEDLVKLAQKHRECAYFHAREALDHANIVFAPYNYLLDPTIRGAVGITLKDAIIVLDEAHNVEDTCRSSASVEVTTDALAASIKAFTIVIKHGN-RPKTYNALLKLLNGINRWLQSVDSNANAILQPSGYEEKSKVWDGADALAMLAEYSGLTKDNLEEMKENVQEVREYENGLGNSAESSQQPPTQAAQDAAANPTG------ASVLLGALALATVESIMNVVDYMFR-DRLKFIEDFKLVVIKSKSTWKENASFRSP---TKRNGGDEWELKMCIWCLNAAVAFSDI 606          
BLAST of mRNA_C-tenellus_contig10044.1.1 vs. uniprot
Match: A0A6H5JGC9_9PHAE (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGC9_9PHAE)

HSP 1 Score: 263 bits (671), Expect = 2.130e-72
Identity = 217/624 (34.78%), Postives = 287/624 (45.99%), Query Frame = 2
Query:  182 MSKMLLGLRQGKNCLLESPTGTGKTLALLCSALAWQRQQRLDLADSKEEIEEDEKSSIKSIDTERKGESIIDNVSYRGGQ--DTNPQVGPSQISRSGPIELDYECEMNTQKTAGLEQTNKDTKGILSDIFSDDDVFEDAKKRRKKTXXXXXXXKYRVKEEKCIEGLDNVEGADTVQ-DCQPDSSGSTQSSTVQRKIQQEEGANMTPSRMEEESDLGDGKDDGKINTSVGVDIKSKASEVVKE--KKKKVPRVFFCSRTHSQLGQVVAELRTCETALGQVSVAEVGSDQDPFSMTLLSSRKNACIHKTAMKNDKGVDEACKSLLKENSCAYFRRSKSMAKLLPQVWDVEDIVRLGKENHACPYYAARESLYNADLVFCPYNYLVDPVVRDIMGISLKNSVVIFDEAHNLESAAREAASANLSSWALSDAVTQLKSLSKKGLVLDWAYNRLIPMVEGVRDFLLEAEENLTNSGYEQAHKIYSGEQALGLMHSRAGVTPESLPGLKEALNRIATDDPRADSTGNPDEDHI--------ESTLSSGAVLVVSSLLTVLGFLVSGNSMENVPHYRMVVLKERLRWGQGRGRRKEGQGSMQGGGLR-MQTLLCFWCLSAGVCFAKINDLV 2011
            MSK+L+G+++G+NCLLESPTGTGKTLALLC+ LAWQRQQR            ++  ++++ D E + E +ID  S    +  D    V P ++ +  PI+L YE  +   K        ++  G  +  + D D            XXXXXXX   +        +D+ E +D    D   DS  S                      + +E DL     D      V    + KA + VK+  ++K+VPRV+FCSRTHSQL QVVAELRTC TA    S   +G D  PFSM LL+SRK+ CI+  A  + KG+D+ACK LLKE +C Y+                                              PYNYLVDP VR+IMGI LKN+VVIFDEAH                                                                      K+Y G +ALGLM SRAGVT ESL  LKEAL  + ++D  AD       D          +  LSSG+  V +SL+ VLGFL++   MENV HY+MVVL+ER  W     R + G+  +  G +  M+T LCFWC SA  CF++I+  V
Sbjct:    1 MSKLLMGVQKGENCLLESPTGTGKTLALLCAVLAWQRQQR------------EQGVTVETSDCESEEEPMIDLGSQEPLRSFDDFRYVEP-KVQQHAPIKLAYEDAVEPGK-------QEEPVGDRTSFYDDYDXXXXXXXXXXXXXXXXXXXXXXM--------IDSPESSDGPHHDSHQDSPDSP---------------------VADEPDLSKPPSDAVTPADVKPKKRGKAVKAVKQEARRKRVPRVYFCSRTHSQLNQVVAELRTCRTAFQDTSAVGIGDDGKPFSMALLASRKSMCINSEACNDPKGIDDACKRLLKEKACTYYS---------------------------------------------PYNYLVDPGVREIMGIDLKNAVVIFDEAH----------------------------------------------------------------------KVYKGAEALGLMQSRAGVTSESLVYLKEALKMVMSEDGNADPYARDQVDGASFGHGHGGDEVLSSGSAHVTASLVKVLGFLLT-EGMENVDHYKMVVLRERGPWEPVSSRGRRGRNRLGSGSITAMETYLCFWCQSASTCFSEIDKQV 459          
BLAST of mRNA_C-tenellus_contig10044.1.1 vs. uniprot
Match: A0A3F2RKI7_9STRA (Helicase ATP-binding domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RKI7_9STRA)

HSP 1 Score: 256 bits (653), Expect = 4.310e-70
Identity = 189/678 (27.88%), Postives = 334/678 (49.26%), Query Frame = 2
Query:   92 AMPN-DNVYLIQGYSVSFPSGKKPFPSQFAVMSKMLLGLRQGKNCLLESPTGTGKTLALLCSALAWQRQ-QRLDLADSKEEIEEDEKSS--------------IKSIDTERKGESIIDNVSYRGGQDTNPQVGPSQISRSGPIELDYECEMNTQKTAGLEQTNKDTKGILSDIFSDDDVFEDAKKRRKKTXXXXXXXKYRVKEEKCIEGLDNVEGADTVQDCQPDSSGSTQSSTVQRKIQQEEGANMTPSRMEEESDLGDGKDDGKINTSVGVDIKSKASEVVKEKKKKVPRVFFCSRTHSQLGQVVAELRTCETALGQVSVAEVGSDQDPFSMTL----LSSRKNACIHKTAMKNDKGVDEACKSLLKENSCAYFRRSK---SMAKLLPQVWDVEDIVRLGKENHACPYYAARESLYNADLVFCPYNYLVDPVVRDIMGISLKNSVVIFDEAHNLESAAREAASANLSSWALSDAVTQLKSLSKKGLVLDWAYNRLIPMVEGVRDFLLEAEEN----LTNSGYEQAHKIYSGEQALGLMHSRAGVTPESLPGLKEALNRIATDDPRADSTGNPDEDHIEST-------------LSSGAVLVVSSLLTVLGFLVSGNSMENVPHYRMVVLKERLRWGQGRGRRKEGQGSMQGGGLRMQTLLCFWCLSAGVCFAKIND 2005
            A+P  +N  ++ G++V+FP GK+PFP+Q AVM+K+L  L+  ++ LLESPTG+GKTLALLCS+L +Q+Q  + ++A  K+++EE +K                ++ I  +++GE     +   G   T P                              Q   D   + S+ +          K+R +T                 +G+  V   D +            ++T ++++       +  S      D G  + +  IN+ +     ++ +   K ++   PR++FCSRTHSQL QVV EL+ C      VS  E   D + F+  L    L S++N C+++   K+   VDE C+  L+  SC+YFR+ K    + + +P VWD+EDIV+L + +  C Y+ ARE+L +A++VF PYNYL+DP +R+ +GI+LK+S+++ DEAHN+E   R +AS  +++  L  A+     + K G      YN L+ ++ G+  +L     N    L NSG++   K++ G  AL ++   +G+T ++L  +K+ +  +   +    S G   ++   +T             L + A+  V S++ V+ ++   + ++ +  +++VV+K + +W +G     +     +  G   Q  +C WCL+A V F+ I +
Sbjct:   15 ALPTPENKVMVMGFNVAFPEGKRPFPAQLAVMNKVLTALKTSQHALLESPTGSGKTLALLCSSLTFQKQFVQEEMAAVKKKLEETQKQQXXXXXXXXXXXEKLLEQIQGQKEGEQQQQQI--EGEDFTQPTXXXXXXXXXXXXXXXXXXXXXXXXXVEATQPTFDQFRLGSEGW--------LSKKRGRT-----------------DGVAGVNKEDQID----------AATTKKKRV-------LPASFTHAADDAGQEQLEKMINSLLPT---TEGASGKKTRRVVPPRIYFCSRTHSQLAQVVDELKHCP-----VSFLESPEDSNTFTNQLQTCILGSKRNYCVNQKVNKDPSQVDEKCRLALEGQSCSYFRKRKRVNDLRRAVPPVWDIEDIVKLAQRHRECAYFHAREALDHANIVFAPYNYLLDPTIREAVGITLKDSIIVLDEAHNVEDTCRSSASVEVTTEVLEAAIKAFSIVIKHGN-RPKTYNALLKLLNGINRWLQAVNNNANTILQNSGFDVKSKVWDGVDALAMLAEYSGLTHDTLAEMKKNMQDVREYESELTSNGESSQEQTPATQDAAANPSGASVVLGALALTTVESIMHVVDYMFR-DQLKYLNDFKLVVIKSKAQWQEG----GKFLSPTKRNGNEWQLKMCIWCLNAAVAFSDIAN 634          
BLAST of mRNA_C-tenellus_contig10044.1.1 vs. uniprot
Match: A0A067CCE9_SAPPC (DNA helicase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CCE9_SAPPC)

HSP 1 Score: 254 bits (650), Expect = 4.900e-70
Identity = 199/642 (31.00%), Postives = 297/642 (46.26%), Query Frame = 2
Query:  113 YLIQGYSVSFPSGKKPFPSQFAVMSKMLLGLRQGKNCLLESPTGTGKTLALLCSALAWQRQQRLDLADSKEEIEEDEKSSIKSIDTERKGESIIDNVSYRGGQDTNPQVGPSQISRSGPIELDYECEMNTQKTAGLEQTNKDTKGILSDIFSDDDVFEDAKKRRKKTXXXXXXXKYRVKEEKCIEGLDNVEGADTVQDCQPDSSGSTQSSTVQRKIQQEEGANMTPSRMEEESDLGDGKDDGKINTSVGVDIKSKASEVVKEKKKKVPRVFFCSRTHSQLGQVVAELRTCETALGQVSVAEVGSDQDPFSMTLLSSRKNACIHKTAMKNDKG-VDEACKSLLKENSCAYFRRSK---SMAKLLPQVWDVEDIVRLGKENHACPYYAARESLYNADLVFCPYNYLVDPVVRDIMGISLKNSVVIFDEAHNLESAAREAASANLSSWALSDAVTQLKSLSKKGLVLDWAYNRLIPMVEGVRDFL--LEAEENLTNSGYEQAHKIYSGEQALGLMHSRAGVTPESLPGLKEALNRIATDDPRADST-GNPDEDHIEST-----LSSGAVLVVSSLLTVLGFLVSGNSMENVPHYRMVVLKERLRWGQGRGRRKEGQGSMQGGGLRMQTLLCFWCLSAGVCFAKIN 2002
            ++I GY V FP GK PFPSQ AVMSK+LL L++ +N LLESPTG+GKTLALLCS+LAWQRQ  LDL +++ +   +E         +RK ++              P   P   S    I+ D+             Q   D K  L D                          Y                        P ++ ST +S                                    S   D+ + A E       K+P ++FCSRTHSQ+ QVV ELR C  A             D   M +L S+K+ C++      D G +++ C +  +ENSC + ++ K    M K++P VWD+E++V +G+E   CPYY    ++  A LVFCPYNY++DP +R  + I LK+++VI DEAHN+E   R +AS  L+   L DA    +   K  ++   +Y  L+ ++ G + +L  ++ E+ L  +GYE   + +SG  A+ ++    GVT  ++    E  + +AT++  +D   GNP E   ++      L+S A+L V S+LTV  FL       +V  Y++V +K R   G        G+ + Q     MQ  +C WCL AGV F++I 
Sbjct:   20 FMIMGYGVDFPQGKTPFPSQLAVMSKVLLALKKQQNALLESPTGSGKTLALLCSSLAWQRQHMLDLREAENKRINEE--------VQRKLDAPA------------PVAAPDLDSSVASIDDDF-------APVSFSQFQFDKKRQLPDSL----------------------LPYTTA---------------------PSATASTPASA-----------------------------------STTADVPAVAKE-------KIPTIYFCSRTHSQISQVVQELRRCPHA-------------DKVKMVVLGSKKHYCVNPAVRNLDPGKINDECSTKREENSCKFVKKLKMHNEMKKVVPPVWDIEELVEVGEELRECPYYYTHAAVEQATLVFCPYNYIMDPTIRAAVKIDLKSAIVILDEAHNIEDVCRSSASMELTYDQLEDASKSFEITIKAQIMKSPSYIMLLKILNGWKRWLSNVDREKQLRPNGYETESQKWSGADAIAVLGDYCGVTAANINDTIENYHTVATEERTSDDDPGNPTEAASQTQQKGVKLTSVALLSVLSVLTVAKFL-----FRHVDDYKLVAVKSRPFGG--------GKKAAQ-----MQLKVCLWCLHAGVAFSEIT 518          
BLAST of mRNA_C-tenellus_contig10044.1.1 vs. uniprot
Match: G4YGX5_PHYSP (Helicase ATP-binding domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4YGX5_PHYSP)

HSP 1 Score: 254 bits (650), Expect = 1.780e-69
Identity = 194/684 (28.36%), Postives = 332/684 (48.54%), Query Frame = 2
Query:   77 AVSREAMPNDNVYLIQGYSVSFPSGKKPFPSQFAVMSKMLLGLRQGKNCLLESPTGTGKTLALLCSALAWQRQQRLDLADSKEEIEEDEKSSIKSIDTERKGESIIDN--------------VSYRGGQDTNPQVGPSQISRSGPIELDYECEMNTQKTAGLEQTNKDTKGILSDIFSDDDVFEDAKKRRKKTXXXXXXXKYRVKEEKCIEGLDNVEGADTVQDCQPDSSGSTQSSTVQRKIQQEEGANMTPSRMEEESDLGDGKDDGKINTSVGVDIKSKASEVVKEKKKKVPRVFFCSRTHSQLGQVVAELRTCETALGQVSVAEVGSDQDPFSMTL----LSSRKNACIHKTAMKNDKGVDEACKSLLKENSCAYFRRSKSMAKL---LPQVWDVEDIVRLGKENHACPYYAARESLYNADLVFCPYNYLVDPVVRDIMGISLKNSVVIFDEAHNLESAAREAASANLSSWALSDAVTQLKSLSKKGLVLDWAYNRLIPMVEGVRDFLLEAEEN----LTNSGYEQAHKIYSGEQALGLMHSRAGVTPESLPGLKEALNRIATDDPRADSTGNPDEDHIESTLSSG------------------AVLVVSSLLTVLGFLVSGNSMENVPHYRMVVLKERLRWGQGRGRRKEGQGSMQGGGLRMQTLLCFWCLSAGVCFAKI 1999
            A   +A P +N ++I GY+V FP GK+PFP+QFAVM+K+L  L+  ++ LLESPTG+GKTLALLCS+L +Q+Q   D   + ++ +ED K  +++ + ++                      V     Q    + G +Q +                  AGL++     +     + +      + +   + +       + R         LD    AD+              +T ++++  +  A          S   D  D G   T+VG D K K   VV       PR++FCSRTHSQL QVV EL+ C      VS  +   D + ++  L    L S++N C+++   ++   VDE C+  L+  SC+YF++ K    L   +P VWD+ED+V+L +++  C Y+ ARE+L +A++VF PYNYL+DP +R+ +GI+LK+S+++ DEAHN+E   R +AS  +++  L+ ++     + K G     +YN L+ ++ G+  +L   + N    L  SGYE+  K++ G  AL ++   +G+T ++L  +K  +  +   +   +  GN  E   ++T S                    A+  V S++ V  ++   N ++ +  +++VV+K    W +    R     + + GG   +  +C WCL+A V F+ I
Sbjct:   10 AGPEDAPPKENAFMIMGYNVEFPRGKRPFPAQFAVMNKVLTALKTEQHALLESPTGSGKTLALLCSSLTFQKQFVRDKVAALKKEQEDPK--VRAQEAQKXXXXXXXXXXXXXXXXXXXXXXVEXXRRQRQEREGGSTQSTFQXXXXXXXXXXXXXXXVAGLKE-----EXXXXXVAATQPSGSNGESNPRLSADGWMSTRKRE--------LD----ADST-------------ATKKKRVLPKSFAFAAADAGNAASQPADSADVGA--TAVGPDGKPKKKRVVP------PRIYFCSRTHSQLAQVVDELKNCP-----VSYLDSPEDSNTYTKQLQTCVLGSKRNMCVNRKVNRDPSQVDEKCRLALEGASCSYFKKRKKANDLRRHVPPVWDIEDLVKLAQKHRECAYFHAREALDHANIVFAPYNYLLDPSIREAVGITLKDSIIVLDEAHNVEDTCRSSASVEVTTEVLAASIKAFSIVIKHGN-RPKSYNALLKLLNGINRWLQSVDSNANAILQPSGYEEKSKVWDGADALAMLAEYSGLTKDNLAEMKANVQEVREYE---NELGNSAESSQQATQSKASQDAAANPTGASVLLGALALATVQSIMNVADYMFRDN-LKFIDDFKLVVIKSTSTWKESASFRSP---TKRNGGDEWELKMCIWCLNAAVAFSDI 640          
BLAST of mRNA_C-tenellus_contig10044.1.1 vs. uniprot
Match: A0A225WZ18_9STRA (Helicase ATP-binding domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WZ18_9STRA)

HSP 1 Score: 253 bits (646), Expect = 3.740e-69
Identity = 190/667 (28.49%), Postives = 318/667 (47.68%), Query Frame = 2
Query:   95 MPNDNVYLIQGYSVSFPSGKKPFPSQFAVMSKMLLGLRQGKNCLLESPTGTGKTLALLCSALAWQRQQRLDLADSKEEIEEDEKSSIKSIDTERKGESIIDNVSYRGGQDTNPQVGPSQISRSGPIELDYECEMNTQKTAGLEQTNKDTKGILSDIFSDDDVFEDAKKRRKKTXXXXXXXKYRVKEEKCIEGLDNVEGADTVQDCQPDSSGSTQSSTVQRKIQQEEGANMTPSRMEEESDLGDGKDDGKINTSVGVDIKSKASEVVKEKKKK---VPRVFFCSRTHSQLGQVVAELRTCETALGQVSVAEVGSDQDPFSMT------LLSSRKNACIHKTAMKNDKGVDEACKSLLKENSCAYFRRSKS---MAKLLPQVWDVEDIVRLGKENHACPYYAARESLYNADLVFCPYNYLVDPVVRDIMGISLKNSVVIFDEAHNLESAAREAASANLSSWALSDAVTQLKSLSKKGLVLDWAYNRLIPMVEGVRDFLLEAEEN----LTNSGYEQAHKIYSGEQALGLMHSRAGVTPESLPGLKEALNRI------------ATDDPRA----DSTGNPDEDHIESTLSSGAVLVVSSLLTVLGFLVSGNSMENVPHYRMVVLKERLRWGQGRGRRKEGQGSMQGGGLRMQTLLCFWCLSAGVCFAKI 1999
            M   N ++I GYSV FP GK+PFP+Q AVM+K+L  L+  ++ LLESPTG+GKTLALLCS+L +Q+Q   +   + ++ +ED   + K    +++                               +       +TQ+T         T+   +   ++DDV                                                  TQ S         E   +T  + E E+D    K    +  S    +K K  E   + KKK    PR+FFCSRTHSQL QVV EL+ C        VA + S +D  + T      +L S++N C+++   ++   VDE C+  L+ +SC+YF++ K    + + +P VWD+ED+V+L +++  C Y+ +RE+L +A++VF PYNYL+DP +RD +GISLK+S+V+ DEAHN+E   R +AS  ++   L+ ++     + K G      YN L+ ++ G+  +L   + N    L  SGY++  K++ G  AL ++   +G+T ++L  +K  +  +            ++  P+     D+  NP    +   L + A+  V S++ V+ ++   +S++ V  +++VV+K +  W      R     + +  G   +  +C WCL+A V F+ I
Sbjct:    1 MSEANTFMIMGYSVEFPQGKRPFPAQLAVMNKVLTALKTEQHALLESPTGSGKTLALLCSSLTFQKQFVQEKVAAIKKQQED--PTFKEQQAKKQAXXXXXXXXXXXXXXXXXXXXXXXXXXXREADFSQYSFQSTQETV--------TQATPATQVTEDDV------------------------------------------------APTQPSA--------EDGWLTTRKRELENDSTATKKTRVLPNSFA-SVKDKTEEKAADPKKKRVVPPRIFFCSRTHSQLAQVVDELKNCP-------VAYLDSPEDSNTYTNQLQTCVLGSKRNMCVNRKVNRDPSQVDEKCRLALEGSSCSYFKKRKKTNDLRRTVPPVWDIEDLVKLAQKHRECAYFHSREALDHANIVFAPYNYLLDPTIRDAVGISLKDSIVVLDEAHNVEDTCRSSASVEVNDEVLAASIKAFSIVIKHGN-RPKTYNALLKLLNGISRWLQSVDSNANAILQPSGYDEKSKVWDGADALAMLAEYSGLTKDNLAEMKANVQEVREYENELGNSADSSQQPQTQASQDAAANPTGSSV--LLGALALATVQSIMNVVDYMFR-DSLKYVDDFKLVVIKSKSTWKDNTSFRSP---TKRNSGDEWELKMCIWCLNAAVAFSDI 586          
BLAST of mRNA_C-tenellus_contig10044.1.1 vs. uniprot
Match: H3GHW5_PHYRM (Helicase ATP-binding domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GHW5_PHYRM)

HSP 1 Score: 253 bits (646), Expect = 5.060e-69
Identity = 200/679 (29.46%), Postives = 330/679 (48.60%), Query Frame = 2
Query:   68 LGVAVSREAM--PNDNVYLIQGYSVSFPSGKKPFPSQFAVMSKMLLGLRQGKNCLLESPTGTGKTLALLCSALAWQRQ-QRLDLADSKEEIEEDEKSSIKSIDTERKGESIIDNVSYRGGQDTNPQVGPSQISRSGPIELDYECEMNTQKTAGLEQTNKDTKGILSDIFSDDDVFED-----AKKRRKKTXXXXXXXKYRVKEEKCIEGLDNVEGADTVQDCQPDSSGSTQSSTVQRKIQQEEGANMTPSRMEEESDLGDGKDDGKINTSVGVDIKSKASEVVKEKKKKVPRVFFCSRTHSQLGQVVAELRTCETALGQVSVAEVGSDQDPFSMTL----LSSRKNACIHKTAMKNDKGVDEACKSLLKENSCAYFRRSKSMAKL---LPQVWDVEDIVRLGKENHACPYYAARESLYNADLVFCPYNYLVDPVVRDIMGISLKNSVVIFDEAHNLESAAREAASANLSSWALSDAVTQLKSLSKKGLVLDWAYNRLIPMVEGVRDFL----LEAEENLTNSGYEQAHKIYSGEQALGLMHSRAGVTPESLPGLK-------EALNRIATDDPRA---------DSTGNPDEDHIESTLSSGAVLVVSSLLTVLGFLVSGNSMENVPHYRMVVLKERLRWGQGRGRRKEGQGSMQGGGLRMQTLLCFWCLSAGVCFAKI 1999
            +G AV  +A   P +N ++I GYSV+FPSGK+PFP+Q AVM+K+L  L+  ++ LLESPTG+GKTLALLCS+L +Q+Q  +  +A  K+E+++     +   + +++                                 D   +   Q T  +   + D     + +  DD    +      KKR                      GL+    A   +   P S G              E A   P  +E   D+          ++V  D K K   VV       PR++FCSRTHSQL QVV EL+ C      V+  +   D + ++  L    L S++N C++    K+   VDE C+  L+ +SC+YFR+ K +  L   +P VWD+ED+V+L +++  C Y+ ARE+L +A++VF PYNYL+DP +RD +GI+LK+S++I DEAHN+E   R +AS  +++  L+ ++     + K G      YN L+ ++ G+  +L    L A   L  SGY++  K++ G  AL ++   +G+T ++L  +K       E  N +A     A         D+  NP    +   L + A+    S++ V+ ++   ++++ +  +++VV+K +  W +    R     + + GG   +  +C WCL+A V F+ I
Sbjct:    1 MGDAVGPQASEAPVENKFMIMGYSVAFPSGKRPFPAQLAVMNKVLTALKTEQHALLESPTGSGKTLALLCSSLTFQKQFVQEKMAALKKEMDD---PKVLEQEAKKQAXXXXXXXXXXXXXXXXXXXXXXXXXXQRHEREDDSTQSTYQPTQEMSVDDDDEDVAATQLAFDDGRLSNNGWMSTKKR----------------------GLETNSIAPKKKRILPKSFGFAA-----------EDAGKAPQGVES-FDV----------STVTADGKPKQKRVVP------PRIYFCSRTHSQLAQVVDELKNCP-----VTYLDSPEDANAYTKQLQTCVLGSKRNLCVNPKVNKDPSQVDEKCRLALEGSSCSYFRKRKKVNDLRRNVPPVWDIEDLVQLAQKHRECAYFHAREALDHANIVFAPYNYLLDPTIRDAVGITLKDSIIILDEAHNVEDTCRSSASVEVTTDVLAASIKAFSIVIKHGN-RPKTYNALLKLLNGISRWLQSVDLNANAILQPSGYDEKSKVWDGTDALAMLAEYSGLTKDNLAEMKANVQEVREYENELANSGESAQQPTTQASQDAAANPTGASV--LLGALALATAQSIVNVVDYMFR-DALKYIDDFKLVVIKSKSTWRENASFRSP---TKRNGGDEWELKMCIWCLNAAVAFSDI 614          
BLAST of mRNA_C-tenellus_contig10044.1.1 vs. uniprot
Match: A0A1V9Y8C4_9STRA (DNA helicase (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y8C4_9STRA)

HSP 1 Score: 247 bits (630), Expect = 1.140e-68
Identity = 193/651 (29.65%), Postives = 297/651 (45.62%), Query Frame = 2
Query:  116 LIQGYSVSFPSGKKPFPSQFAVMSKMLLGLRQGKNCLLESPTGTGKTLALLCSALAWQRQQRLDLADSKEEIEEDEKSSIKSIDTERKGESIIDNVSYRGGQDTNPQVGPSQISRSGPIELDYECEMNTQKTAGLEQTNKDTKGILSDIFSDDDVFEDAKKRRKKTXXXXXXXKYRVKEEKCIEGLDNVEGADTVQDCQPDSSGSTQSSTVQRKIQQEEGANMTPSRMEEESDLGDGKDDGKINTSVGVDIKSKASEVVKEKKKKVPRVFFCSRTHSQLGQVVAELRTCETALGQVSVAEVGSDQDPFSMTLLSSRKNACIHKTAMKNDKG-VDEACKSLLKENSCAYFRRSKS---MAKLLPQVWDVEDIVRLGKENHACPYYAARESLYNADLVFCPYNYLVDPVVRDIMGISLKNSVVIFDEAHNLESAAREAASANLSSWALSDAVTQLKSLSKKGLVLDWAYNRLIPMVEGVRDFL--LEAEENLTNSGYEQAHKIYSGEQALGLMHSRAGVTPESLPGLKEALNRIATDDPRADSTG-NPDEDHIEST----LSSGAVLVVSSLLTVLGFLVSGNSMENVPHYRMVVLKER----------LRWGQGRGRRKEGQGSMQGGGLRMQTLLCFWCLSAGVCFAKIND 2005
            +I G+SV FP G KPFP+Q AVMSK++L L++ +N LLESPTG+GKTLALLCS+LAWQ+Q R+D+A+                          + +++      N  +   + +   P+ +        Q     +  + D + I          F  A+  +K+T                                 P+S      +  Q  +         P+  E   D                     A+ V +EK    P ++FCSRTHSQ+ QVV ELR C TA G               M +L S+K+ C+H      D G V++ C +L  +N C + ++ K+   M   +P VWD+ED+V+LG+E+  CPYY    ++ NA LVFCPYNY++DP +R  + I LKNS+VI DEAHN+E   R +AS  L+   L +A     +  K  +     Y  L+ ++ G   +L  ++ E+ L   GYE   + +SG   + +M+   G+ P ++    E    +AT +  +D    NP++          L+S A++ V S+L V  F+   N ++ V  Y++VV++ R           R+   +G RK            +Q  LC WCL AGV F+ I  
Sbjct:    9 MIMGHSVEFPEGTKPFPAQLAVMSKVILALKKRQNALLESPTGSGKTLALLCSSLAWQQQHRIDMAEQ-------------------------ERIAH------NEILERQRAAAEAPVPVP-----EVQIHPPTQSVDDDFEAIS---------FSQARSEKKRTF--------------------------------PESLRQYAFNADQLPL-------PVPTTQEPPHD-------------------KPAAAVNREK---TPTIYFCSRTHSQITQVVQELRRCPTASG-------------VRMVVLGSKKHYCVHPKVRNLDGGKVNDECSALQDDNGCRFRKKLKTHNEMRAYVPSVWDIEDLVKLGEEHRECPYYYTHLTVENASLVFCPYNYIMDPSIRSALKIDLKNSIVILDEAHNIEDVCRSSASMELTWEQLEEARASFAATIKSQISPQQMYASLLKLLNGWGRWLEHVQREKLLKTIGYEHETQQWSGVDCVAIMNEFCGLNPGNIETYNEIYQTVATAERESDDDNKNPEKQAAPQEKAVKLTSTALMSVLSVLNVATFMFR-NDLQYVHDYKLVVIRSRPFGGKILHFWYRFNFAQGGRKAQH---------LQLKLCLWCLHAGVAFSDITS 530          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10044.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLD2_ECTSI1.870e-15045.30DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A662WP93_9STRA2.480e-7529.03Helicase ATP-binding domain-containing protein n=2... [more]
D0NXC2_PHYIT2.450e-7429.19Helicase ATP-binding domain-containing protein n=1... [more]
A0A6H5JGC9_9PHAE2.130e-7234.78Helicase ATP-binding domain-containing protein n=1... [more]
A0A3F2RKI7_9STRA4.310e-7027.88Helicase ATP-binding domain-containing protein n=4... [more]
A0A067CCE9_SAPPC4.900e-7031.00DNA helicase n=2 Tax=Saprolegnia TaxID=4769 RepID=... [more]
G4YGX5_PHYSP1.780e-6928.36Helicase ATP-binding domain-containing protein n=4... [more]
A0A225WZ18_9STRA3.740e-6928.49Helicase ATP-binding domain-containing protein n=1... [more]
H3GHW5_PHYRM5.060e-6929.46Helicase ATP-binding domain-containing protein n=1... [more]
A0A1V9Y8C4_9STRA1.140e-6829.65DNA helicase (Fragment) n=1 Tax=Thraustotheca clav... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10044contigC-tenellus_contig10044:130..5247 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FLD2
PFAMsDEAD_2,HHH_8,Helicase_C_2
Model size2012
Max annot lvl2759|Eukaryota
KEGG koko:K11136,ko:K15362
KEGG Pathwayko03440,ko03460,map03440,map03460
Hectar predicted targeting categoryother localisation
Exons10
Evalue2.2e-151
EggNOG OGsCOG1199@1|root,KOG1132@2759|Eukaryota
EC3.6.4.12
DescriptionATP-dependent DNA helicase activity
Cds size1917
COG categoryKL
BRITEko00000,ko00001,ko01000,ko03032,ko03400
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10044.1.1prot_C-tenellus_contig10044.1.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig10044 224..5247 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789112.0629132-UTR-C-tenellus_contig10044:129..2231680789112.0629132-UTR-C-tenellus_contig10044:129..223Choristocarpus tenellus KU2346UTRC-tenellus_contig10044 130..223 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789112.0753617-CDS-C-tenellus_contig10044:223..4291680789112.0753617-CDS-C-tenellus_contig10044:223..429Choristocarpus tenellus KU2346CDSC-tenellus_contig10044 224..429 +
1680789112.0830643-CDS-C-tenellus_contig10044:524..13121680789112.0830643-CDS-C-tenellus_contig10044:524..1312Choristocarpus tenellus KU2346CDSC-tenellus_contig10044 525..1312 +
1680789112.0912995-CDS-C-tenellus_contig10044:1572..16451680789112.0912995-CDS-C-tenellus_contig10044:1572..1645Choristocarpus tenellus KU2346CDSC-tenellus_contig10044 1573..1645 +
1680789112.1097376-CDS-C-tenellus_contig10044:1886..20211680789112.1097376-CDS-C-tenellus_contig10044:1886..2021Choristocarpus tenellus KU2346CDSC-tenellus_contig10044 1887..2021 +
1680789112.131807-CDS-C-tenellus_contig10044:2515..25311680789112.131807-CDS-C-tenellus_contig10044:2515..2531Choristocarpus tenellus KU2346CDSC-tenellus_contig10044 2516..2531 +
1680789112.1407723-CDS-C-tenellus_contig10044:3123..31891680789112.1407723-CDS-C-tenellus_contig10044:3123..3189Choristocarpus tenellus KU2346CDSC-tenellus_contig10044 3124..3189 +
1680789112.1530154-CDS-C-tenellus_contig10044:3392..34951680789112.1530154-CDS-C-tenellus_contig10044:3392..3495Choristocarpus tenellus KU2346CDSC-tenellus_contig10044 3393..3495 +
1680789112.1641526-CDS-C-tenellus_contig10044:3936..40431680789112.1641526-CDS-C-tenellus_contig10044:3936..4043Choristocarpus tenellus KU2346CDSC-tenellus_contig10044 3937..4043 +
1680789112.179728-CDS-C-tenellus_contig10044:4526..46761680789112.179728-CDS-C-tenellus_contig10044:4526..4676Choristocarpus tenellus KU2346CDSC-tenellus_contig10044 4527..4676 +
1680789112.1880834-CDS-C-tenellus_contig10044:4974..52471680789112.1880834-CDS-C-tenellus_contig10044:4974..5247Choristocarpus tenellus KU2346CDSC-tenellus_contig10044 4975..5247 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig10044.1.1

>prot_C-tenellus_contig10044.1.1 ID=prot_C-tenellus_contig10044.1.1|Name=mRNA_C-tenellus_contig10044.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=639bp
MPNDNVYLIQGYSVSFPSGKKPFPSQFAVMSKMLLGLRQGKNCLLESPTG
TGKTLALLCSALAWQRQQRLDLADSKEEIEEDEKSSIKSIDTERKGESII
DNVSYRGGQDTNPQVGPSQISRSGPIELDYECEMNTQKTAGLEQTNKDTK
GILSDIFSDDDVFEDAKKRRKKTKRISKKRKYRVKEEKCIEGLDNVEGAD
TVQDCQPDSSGSTQSSTVQRKIQQEEGANMTPSRMEEESDLGDGKDDGKI
NTSVGVDIKSKASEVVKEKKKKVPRVFFCSRTHSQLGQVVAELRTCETAL
GQVSVAEVGSDQDPFSMTLLSSRKNACIHKTAMKNDKGVDEACKSLLKEN
SCAYFRRSKSMAKLLPQVWDVEDIVRLGKENHACPYYAARESLYNADLVF
CPYNYLVDPVVRDIMGISLKNSVVIFDEAHNLESAAREAASANLSSWALS
DAVTQLKSLSKKGLVLDWAYNRLIPMVEGVRDFLLEAEENLTNSGYEQAH
KIYSGEQALGLMHSRAGVTPESLPGLKEALNRIATDDPRADSTGNPDEDH
IESTLSSGAVLVVSSLLTVLGFLVSGNSMENVPHYRMVVLKERLRWGQGR
GRRKEGQGSMQGGGLRMQTLLCFWCLSAGVCFAKINDLV
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mRNA from alignment at C-tenellus_contig10044:130..5247+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig10044.1.1 ID=mRNA_C-tenellus_contig10044.1.1|Name=mRNA_C-tenellus_contig10044.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=5118bp|location=Sequence derived from alignment at C-tenellus_contig10044:130..5247+ (Choristocarpus tenellus KU2346)
CGCGCAGTTTTTGAAAATAGTTACGAAACACTGAAATAGGGGAAGGGGTA GGGGTGGGAAATAGGGCCTAGGGGTGGCCGTATCTCGTGAGGCGATGCCA AATGACAATGTTTACCTCATTCAGGGGTATAGCGTATCCTTTCCCTCGGG AAAAAAACCTTTTCCATCACAATTTGCAGTAATGTCCAAGATGCTCCTAG GGTTGCGACAGGGCAAGAATTGTCTTCTCGAGAGTCCAACCGGAACAGGG AAGACCTTGGCTCTCCTCTGCTCTGCACTAGCGTGGCAGAGGCAACAAAG GTGAAGAATGAAGGTTTCCGTTTGTTTGTATGCTCTATTACATCCATTCC TAAACACCCGGAGTGAATATTTCGTCTCACTTTGCTCGTCCCCAGGCTCG ACCTTGCAGACAGCAAGGAAGAGATAGAGGAGGACGAGAAGTCTAGCATT AAGAGTATCGACACTGAACGGAAGGGTGAGTCCATTATCGATAATGTCAG TTATAGAGGAGGGCAAGACACTAACCCACAAGTGGGACCATCGCAGATTT CAAGGAGTGGGCCGATAGAGCTGGACTACGAATGCGAGATGAACACCCAA AAAACTGCTGGTCTGGAACAGACAAATAAAGATACAAAAGGCATTTTAAG TGATATATTTAGTGACGACGATGTGTTTGAGGATGCTAAGAAGAGGAGAA AGAAGACGAAGCGCATTTCCAAGAAAAGGAAGTATCGAGTCAAGGAAGAG AAATGTATCGAGGGATTGGACAATGTCGAGGGGGCTGACACAGTGCAAGA CTGCCAACCAGATTCATCTGGAAGCACACAATCCTCCACAGTACAGAGAA AGATCCAACAAGAGGAAGGTGCAAATATGACACCCTCGCGTATGGAGGAG GAGAGCGATCTGGGGGATGGCAAGGATGACGGAAAGATTAACACTTCAGT GGGTGTTGACATCAAGTCCAAGGCATCTGAGGTTGTCAAGGAGAAGAAGA AGAAAGTGCCACGGGTGTTCTTCTGCTCACGGACACACTCCCAGCTGGGA CAGGTGGTAGCAGAGCTCCGAACATGTGAAACTGCACTCGGACAAGTGTC TGTGGCAGAGGTAGGGAGTGATCAAGATCCATTTAGCATGACCTTGTTGT CCTCCCGCAAGAATGCATGCATTCACAAAACAGGTGAAGTATATGGGGGT ATAGGTTATTTGCCGTGACACAAAGGGAAAGCTAATGCTGTTCAGCTGTT TGTTGGTGGCGTGTATGCACCTACCTCACTATTGCACTGGAAGTAGTTGT TGCTGGCTGTCATGTCATACATGCACTGCACTGCCGAAGCAGACCTGCTA CCTCTGCCATGCATAGGCTTTGGCAAAGTTTGATCCAGAAATCCTGTCCA GACTCGCTGACACTTACCTTCTCATTTTGATCCACACCCACAGCCATGAA GAACGACAAGGGTGTGGATGAGGCTTGCAAGAGTCTCCTCAAGGAAAACA GCTGCGCATATTTCAGGTGTGGAATACGGTGTGGGTCTTGAGAACTGCAG GTCATTGGTGTATGCACCATCAAGGGAACTAGTTGTGCTAACCTCATGAT AGAATTGAGGTACCTTCCCCCTCACAGAGACTCAACCTTTTGCTTTTGTA TATATTTCCCACGATCTTGAAAACTTACTACTTATTACTTACTACCTTGC ACAATGCCAACACACTTGACACACTGGGGAATATTTGGTAATGGCATGAG TCATTAGACGGTCCAAGTCGATGGCAAAACTCCTTCCTCAGGTTTGGGAT GTAGAAGACATTGTTCGACTGGGGAAGGAGAACCATGCTTGCCCCTACTA TGCTGCAAGGGAATCCCTGTACAATGCCGACCTTGTGTTTTGGTGAGGGA AGGGGTGAAGGGGGGAAACACTTTGTGACCCATTTCTACCATTTTTTGAA TGCTTCATGACCTATACAATATATTCTGTGGTTATAGGGAGATCAATTTG ATGGGGAAAGAAGCGTTCACCATGTGCACACACACACGCACACACAGGTG CATTTTCATATTTGTTAGATAAACAAATCGTTAAATACCAATGCTTTTAA CTTGGTTGTGCTGTTGTATGTGTGATGTGATGGACTGGGGTCATACAACC TTAGTGGTCTGCCTGGTAGAGAATACAACATGTTCTAGGTATAGGGGTCA GAATACTACTAAGTGAAATATTAAGGAATACTGCCATAGTACCCTTGTTC TTGTCTTCTGGGGTGACCTTAACCCTGACTCCTTTCCCAATGCTGCACCC CTCCCAACCACATCCAACCTGTGTGTTATCTGAATACATCATCATTACAA TTGCTGCTCCGGCTACTCCACACATGCTACTTGCAGTCCCTACAACTACC TGGTGAGGGACCCTAATAATAGTCAATGATGTTTCCTCTTAATGTGGGGG TAGAGTGTTAAATTGAAGATGAGTGGATGTTGCATTTTATTTGCTGGTAC TGAGATCTATGTGACGTAGTGAACTACTATTAATACTAGTAGGGTATAAG AAGCACCCTGGTCCTGCATGGGGAGACTACCATCCCATTGGTTCTTTGTG ATAGCCTCTTCTGATCATACAAATGCACTGGTATGTGAATTGAGGAGTAA ATGCATTCACTGCCTCCTGAATGGTTGTACTTAGGGCATGCTGTAGTATT TATTTCATACAGAATGTTTGTGTGTCATGCTTGAGCTCCAGTGATCCTCA TTTGATATGGCACTGTTGGACCCAGTCTTTGCCTTGAAACACCTCACACT CAGGGTGTAGCTCTTGCATTAAAAGACAACACCACACAGGACTGAGCTGT TTCAACTGACCCCAAAATGTGGCCTGGTCCATGTCCTCATCAATAGAAAC ACCAGGCCCTCGATACTTCAAGCATTTCCAATTTGTCCAGAAATTTTAAT ATTTTCAATGTGTGTCTCCCCATTGAATGTCAACCCTTTGCAAGGTGGAC CCTGTTGTTCGTGACATCATGGGTATCTCACTCAAGAACTCTGTGGTAAT CTTTGACGAGGTCAGTTGATGGTGCAAATCTCTGCTGTGCTTTGTACCTC CTGTTGGGTGTATAGATAAGGTATAGGCTTCAGTACAGTACGACTCTCCC AGTGTAAGGTATGTGTGCATGTAAGCCTGGCTTAATTGACATTAATTTAC TTAATTGGTGTCATTGACACATATGCAATTGTCCTGTGCGTACCCAACCC ACACATGCCTCAGGCGCATAATCTGGAGAGTGCTGCAAGGGAAGCAGCAA GTGCCAATCTGTCTTCATGGGCTTTGAGTGATGCTGTGACCCAGCTGAAG TCATTGAGCAAGAAGGGTGAGATCAATAACAAAATGATAAGCACTTTATT TGGATGGGGTGTTTTTTGAGAACCAAGACCTACTGAGTAGACAAGCACAC TGGAATGAGGTACAGGCATTACAAGGGGGAATGGTCTATTCAAGTGCTAT GAGTAAACAGCAGAATCGAAAATAGCTAGTACTGCTGATATGGTAGATGT CTTCGTGGGCCTTTGAACACTGATCTTTGGGTGTTGGAGGTTACATCCTG CGGTCATTCTGAAATTATGCCTACCCACTTTTATGGGTTGCGCTTGTACT TGGTACTACTATATTATTACTACATAGTGTAATGGTATATTCCATTTTCC AGAAACCCCCATTCCTTGCTGAGACTCAGAAACACTTACCCTCATGTAGA ACTCATTTGATCATCTAAATCCCACCTCTTATATTTCCTTTTGCTGAGCC TGTTCAGGCCTGGTTCTTGATTGGGCATACAACCGGTTGATTCCAATGGT TGAAGGGGTACGAGACTTCTTGCTTGAGGCAGAAGAGAATCTAACCAACA GTGGATACGAGCAGGTACAGTAAGCTTCACTGATGGTACCACACTTGTTC GAGGTAGGTAGGCATATGATACATGGTATTACCAATACATGCACACTACA CACAGTGTTGATGATCTTCCTTGTTTCTATGATGTGGAAGCAAAGTAAAA TCTAGCCCAAGATGAAAGGCATCATACAATACCTTCTCATGACATGTGAG TACAGTGTCTCCTAACAGAGATTTGTATTGGTTGTTATTTAATATCCGTT GCCAACTGAAAATATATATATTATTTTTAAGCTGATAGCTGATATACTGG CAGAGAGAGAGGAAACCTCTATATAGCTTTATACTGACTAGTTTTCTTGG ACTGCAATGATATATGGTCAACACATTCCTTGTTATTGTAATGAGTCATT GTACAACAATCACGCTATATTCACAAACAAACAAAAAAATTAAATCCAGA CTAGTGGTATTGACACACAAGAATTCTCTTCCAATACTGCCACGCAGGCA CACAAGATATACAGCGGGGAGCAGGCACTAGGACTAATGCATTCAAGGGC AGGGGTGACACCTGAGTCACTACCAGGTCTGAAGGAGGCATTGAATCGCA TAGCCACAGATGACCCTAGAGCTGATTCAACTGGGAACCCTGATGAGGTA CTGTGGCAGAGGTTGATGTAGGGTAAGGACATATTGACCAGCTTCAATGT CCTTTCTTTTGGTTAAAGTATTTGATTTGTTCCTGGCTGTTACTGGCTGT CAAAGGAAAGATATTTTGTTGTTTAATTATGGCTATGGCGACAGATAACA TTCAATACCCGCACCGCCCCCTCTTTTTTGTCACCATCCCTTGAGGACAA GTGGCATGCTTGCATTTTGACCCTGGTTACCTTGCCTTAAATTCACCTGC CCCCTGTCCCCTGCCCCTCCCTCGTGACAACGATGATATTAATAGGATCA CATTGAGTCCACTCTGAGCAGTGGGGCTGTGTTGGTAGTGAGCTCATTAC TGACAGTTCTAGGCTTCTTGGTGTCAGGGAACAGTATGGAAAATGTACCA CATTACCGAATGGTCGTTCTCAAAGAGCGTCTTCGCTGGGGACAAGGCCG GGGGAGGCGCAAGGAAGGTCAAGGATCCATGCAGGGAGGGGGACTGAGGA TGCAGACATTGCTTTGCTTCTGGTGCTTGAGCGCTGGAGTCTGTTTTGCT AAGATCAATGACCTGGTG
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Coding sequence (CDS) from alignment at C-tenellus_contig10044:130..5247+

>mRNA_C-tenellus_contig10044.1.1 ID=mRNA_C-tenellus_contig10044.1.1|Name=mRNA_C-tenellus_contig10044.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1917bp|location=Sequence derived from alignment at C-tenellus_contig10044:130..5247+ (Choristocarpus tenellus KU2346)
ATGCCAAATGACAATGTTTACCTCATTCAGGGGTATAGCGTATCCTTTCC
CTCGGGAAAAAAACCTTTTCCATCACAATTTGCAGTAATGTCCAAGATGC
TCCTAGGGTTGCGACAGGGCAAGAATTGTCTTCTCGAGAGTCCAACCGGA
ACAGGGAAGACCTTGGCTCTCCTCTGCTCTGCACTAGCGTGGCAGAGGCA
ACAAAGGCTCGACCTTGCAGACAGCAAGGAAGAGATAGAGGAGGACGAGA
AGTCTAGCATTAAGAGTATCGACACTGAACGGAAGGGTGAGTCCATTATC
GATAATGTCAGTTATAGAGGAGGGCAAGACACTAACCCACAAGTGGGACC
ATCGCAGATTTCAAGGAGTGGGCCGATAGAGCTGGACTACGAATGCGAGA
TGAACACCCAAAAAACTGCTGGTCTGGAACAGACAAATAAAGATACAAAA
GGCATTTTAAGTGATATATTTAGTGACGACGATGTGTTTGAGGATGCTAA
GAAGAGGAGAAAGAAGACGAAGCGCATTTCCAAGAAAAGGAAGTATCGAG
TCAAGGAAGAGAAATGTATCGAGGGATTGGACAATGTCGAGGGGGCTGAC
ACAGTGCAAGACTGCCAACCAGATTCATCTGGAAGCACACAATCCTCCAC
AGTACAGAGAAAGATCCAACAAGAGGAAGGTGCAAATATGACACCCTCGC
GTATGGAGGAGGAGAGCGATCTGGGGGATGGCAAGGATGACGGAAAGATT
AACACTTCAGTGGGTGTTGACATCAAGTCCAAGGCATCTGAGGTTGTCAA
GGAGAAGAAGAAGAAAGTGCCACGGGTGTTCTTCTGCTCACGGACACACT
CCCAGCTGGGACAGGTGGTAGCAGAGCTCCGAACATGTGAAACTGCACTC
GGACAAGTGTCTGTGGCAGAGGTAGGGAGTGATCAAGATCCATTTAGCAT
GACCTTGTTGTCCTCCCGCAAGAATGCATGCATTCACAAAACAGCCATGA
AGAACGACAAGGGTGTGGATGAGGCTTGCAAGAGTCTCCTCAAGGAAAAC
AGCTGCGCATATTTCAGACGGTCCAAGTCGATGGCAAAACTCCTTCCTCA
GGTTTGGGATGTAGAAGACATTGTTCGACTGGGGAAGGAGAACCATGCTT
GCCCCTACTATGCTGCAAGGGAATCCCTGTACAATGCCGACCTTGTGTTT
TGTCCCTACAACTACCTGGTGGACCCTGTTGTTCGTGACATCATGGGTAT
CTCACTCAAGAACTCTGTGGTAATCTTTGACGAGGCGCATAATCTGGAGA
GTGCTGCAAGGGAAGCAGCAAGTGCCAATCTGTCTTCATGGGCTTTGAGT
GATGCTGTGACCCAGCTGAAGTCATTGAGCAAGAAGGGCCTGGTTCTTGA
TTGGGCATACAACCGGTTGATTCCAATGGTTGAAGGGGTACGAGACTTCT
TGCTTGAGGCAGAAGAGAATCTAACCAACAGTGGATACGAGCAGGCACAC
AAGATATACAGCGGGGAGCAGGCACTAGGACTAATGCATTCAAGGGCAGG
GGTGACACCTGAGTCACTACCAGGTCTGAAGGAGGCATTGAATCGCATAG
CCACAGATGACCCTAGAGCTGATTCAACTGGGAACCCTGATGAGGATCAC
ATTGAGTCCACTCTGAGCAGTGGGGCTGTGTTGGTAGTGAGCTCATTACT
GACAGTTCTAGGCTTCTTGGTGTCAGGGAACAGTATGGAAAATGTACCAC
ATTACCGAATGGTCGTTCTCAAAGAGCGTCTTCGCTGGGGACAAGGCCGG
GGGAGGCGCAAGGAAGGTCAAGGATCCATGCAGGGAGGGGGACTGAGGAT
GCAGACATTGCTTTGCTTCTGGTGCTTGAGCGCTGGAGTCTGTTTTGCTA
AGATCAATGACCTGGTG
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