mRNA_C-tenellus_contig10041.1.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig10041.1.1
Unique NamemRNA_C-tenellus_contig10041.1.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig10041.1.1 vs. uniprot
Match: A0A6H5LFZ8_9PHAE (Diaminopimelate epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LFZ8_9PHAE)

HSP 1 Score: 338 bits (866), Expect = 2.640e-114
Identity = 157/202 (77.72%), Postives = 177/202 (87.62%), Query Frame = 1
Query:   13 VSFRKYQGLGNDFILVDNRESKDPQLSPEESEKLCDRRLGVGGDGVIFALPGQEGMDYSMRIYNSDGSEPEMCGNGIRCMARFLADLEGRNNAVYKVHTLAGPIIPVAQEDGLVMVDMGPPELNGPSVPTTLPTNAEGIALEEPLEVGEQSWKVTCVSMGNPHAVVFVPDLEAIDLPTIGPLFETHPVFPAKINTEFVQVLS 618
            V F KYQGLGNDFILVDNRE  +P L+ EES  LCDRR G+GGDGVIFALPG + MDYSMRI NSDGSEPEMCGNGIRCMARFLADLEG+  A YK+HTLAG IIP+A+EDGLV VDMGPPELNGP VP+TLPTN +G+ L+EP++V  + W+VTCVSMGNPHAVVFVPD++A+DLPTIGP FETHP FPAKINTEFVQVL+
Sbjct:   55 VPFSKYQGLGNDFILVDNREEAEPMLTAEESASLCDRRYGIGGDGVIFALPGSDDMDYSMRIINSDGSEPEMCGNGIRCMARFLADLEGKKKAEYKIHTLAGTIIPLAREDGLVTVDMGPPELNGPKVPSTLPTNDDGVVLKEPIKVDGKDWEVTCVSMGNPHAVVFVPDVDALDLPTIGPQFETHPSFPAKINTEFVQVLN 256          
BLAST of mRNA_C-tenellus_contig10041.1.1 vs. uniprot
Match: A0A835YU85_9STRA (Diaminopimelate epimerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU85_9STRA)

HSP 1 Score: 304 bits (779), Expect = 1.650e-101
Identity = 145/200 (72.50%), Postives = 160/200 (80.00%), Query Frame = 1
Query:   19 FRKYQGLGNDFILVDNRESKDPQLSPEESEKLCDRRLGVGGDGVIFALPGQEGMDYSMRIYNSDGSEPEMCGNGIRCMARFLADLEGRNNAVYKVHTLAGPIIPVAQEDGLVMVDMGPPELNGPSVPTTLPTNAEGIALEEPLEVGEQSWKVTCVSMGNPHAVVFVPDLEAIDLPTIGPLFETHPVFPAKINTEFVQVLS 618
            F KY+GLGNDFILVDNRE+ DP LSPE+S KLCDR  G+GGDGVIFALPG+  +DY MRIYNSDGSEPEMCGNGIRCMARFLADL+G   A Y++ T AG I+PV    GLV VDMGPPELNGP VPTTLPT A+G  +  PLEV  Q W VTCVSMGNPHA+VFV DL  I L  IGPLFE + VFPA+ NTEFVQVLS
Sbjct:   28 FHKYEGLGNDFILVDNRETADPVLSPEQSAKLCDRNFGIGGDGVIFALPGEGDLDYKMRIYNSDGSEPEMCGNGIRCMARFLADLDGEKEATYRIGTGAGLIVPVVGGGGLVTVDMGPPELNGPKVPTTLPTGADGAVVAAPLEVAGQQWSVTCVSMGNPHAIVFVNDLNTIKLADIGPLFEHNAVFPARTNTEFVQVLS 227          
BLAST of mRNA_C-tenellus_contig10041.1.1 vs. uniprot
Match: A0A7R9YC33_9STRA (Diaminopimelate epimerase n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YC33_9STRA)

HSP 1 Score: 285 bits (729), Expect = 9.240e-94
Identity = 133/209 (63.64%), Postives = 164/209 (78.47%), Query Frame = 1
Query:   10 EVSFRKYQGLGNDFILVDNRESKDPQLSPEESEKLCDRRLGVGGDGVIFALPGQEGMDYSMRIYNSDGSEPEMCGNGIRCMARFLADLEGRNNAV--YKVHTLAGPIIPVAQEDGLVMVDMGPPELNGPSVPTTL-PTNAEGIALEEPLEV---GEQSWKVTCVSMGNPHAVVFVPDLEAIDLPTIGPLFETHPVFPAKINTEFVQVLS 618
            +V+F KYQGLGNDF+LVDNR++++P L+P+ESE LCDR  GVG DGVIFA+PG++G DYSMRIYNSDGSEPEMCGNGIRCMA+FL DL+G + A   YK+ TLAG ++P     G++ VDMG PEL GP VPTTL PT  +   ++ P+     G + WKVTCVSMGNPH + FV DL+A+DL  +GP FE HPVFPA++NTEFVQVLS
Sbjct:   32 KVAFSKYQGLGNDFLLVDNRDAEEPILTPDESEALCDRHFGVGADGVIFAMPGRDGCDYSMRIYNSDGSEPEMCGNGIRCMAKFLQDLDGSSGAEKQYKIWTLAGTMVPTVVASGMITVDMGEPELRGPEVPTTLKPTRDDSAVIDAPMAAPLPGGKDWKVTCVSMGNPHCITFVDDLDAVDLAAVGPQFENHPVFPARVNTEFVQVLS 240          
BLAST of mRNA_C-tenellus_contig10041.1.1 vs. uniprot
Match: A0A7S2HNF9_9STRA (Diaminopimelate epimerase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HNF9_9STRA)

HSP 1 Score: 281 bits (718), Expect = 6.330e-92
Identity = 138/208 (66.35%), Postives = 161/208 (77.40%), Query Frame = 1
Query:    7 VEVSFRKYQGLGNDFILVDNRESKDPQLSPEESEKLCDRRLGVGGDGVIFALPGQEG-MDYSMRIYNSDGSEPEMCGNGIRCMARFLADLEGRNNAV---YKVHTLAGPIIPVAQEDGLVMVDMGPPELNGPSVPTTL-PTNAEGIALEEPLEVGEQSWKVTCVSMGNPHAVVFVPDLEAIDLPTIGPLFETHPVFPAKINTEFVQVL 615
            V V F KYQGLGNDFIL+DNR+  +P L+P ++E++CDR  GVGGDGVIFALP  E   DY MRIYNSDGSEPEMCGNGIRCM +F+  +EG        Y + T AGPIIP  +EDGLV VDMG P L G  VPTTL PT ++G+ L+ PLEV  Q W VTCVSMGNPHA+VFV DLEA+DL ++GP+FET+PVFPAKINTEFVQVL
Sbjct:   41 VTVEFEKYQGLGNDFILIDNRDDPEPLLTPAQAERMCDRNFGVGGDGVIFALPASEAESDYRMRIYNSDGSEPEMCGNGIRCMTKFIQKIEGGAETAKESYHISTGAGPIIPKIREDGLVTVDMGFPILEGSKVPTTLQPTKSDGMVLDAPLEVMGQEWLVTCVSMGNPHAIVFVDDLEAVDLNSVGPVFETNPVFPAKINTEFVQVL 248          
BLAST of mRNA_C-tenellus_contig10041.1.1 vs. uniprot
Match: UPI0019EF3AFD (Diaminopimelate epimerase n=1 Tax=filamentous cyanobacterium LEGE 11480 TaxID=2777977 RepID=UPI0019EF3AFD)

HSP 1 Score: 276 bits (707), Expect = 6.230e-91
Identity = 131/204 (64.22%), Postives = 159/204 (77.94%), Query Frame = 1
Query:    7 VEVSFRKYQGLGNDFILVDNRESKDPQLSPEESEKLCDRRLGVGGDGVIFALPGQEGMDYSMRIYNSDGSEPEMCGNGIRCMARFLADLEGRN-NAVYKVHTLAGPIIPVAQEDGLVMVDMGPPELNGPSVPTTLPTNAEGIALEEPLEVGEQSWKVTCVSMGNPHAVVFVPDLEAIDLPTIGPLFETHPVFPAKINTEFVQVL 615
            + + F KYQGLGNDFILVDNR+S +P+++PE++ KLCDR  G+GGDGVIFALPGQ+G DY MRI+NSDGSEPEMCGNGIRCMARF+ADLEG N    YK+HTLAG I+P    DG V VDMG P L    +PTTL T+A+  ++ +PLEV  QSW+VTCVSMGNPH + FV  + AIDL  IGP FE+   FP KINTEF++V+
Sbjct:    1 MNLEFTKYQGLGNDFILVDNRDSTEPKVTPEQAVKLCDRHFGIGGDGVIFALPGQDGTDYMMRIFNSDGSEPEMCGNGIRCMARFIADLEGDNAKESYKIHTLAGLIVPKLTADGQVTVDMGQPRLQASEIPTTL-TDAQQQSVNQPLEVAGQSWQVTCVSMGNPHCITFVDSVAAIDLEKIGPQFESDAAFPKKINTEFIEVV 203          
BLAST of mRNA_C-tenellus_contig10041.1.1 vs. uniprot
Match: A0A7S2S1Q0_9STRA (Diaminopimelate epimerase n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S1Q0_9STRA)

HSP 1 Score: 278 bits (711), Expect = 7.770e-91
Identity = 132/204 (64.71%), Postives = 158/204 (77.45%), Query Frame = 1
Query:   13 VSFRKYQGLGNDFILVDNRESKDPQLSPEESEKLCDRRLGVGGDGVIFALPGQEGMDYSMRIYNSDGSEPEMCGNGIRCMARFLADLEGRNNA--VYKVHTLAGPIIPVAQEDGLVMVDMGPPELNGPSVPTTLPTNAEGIALEEPLEVGEQSWKVTCVSMGNPHAVVFVPDLEAIDLPTIGPLFETHPVFPAKINTEFVQVLS 618
            V+F+KY GLGNDFILVDNR S DP +SPE++ ++CDR  GVGGDGVIFALP  E  DY+MRIYNSDGSEPEMCGNGIRCMARFL  L+G       Y ++T AGPIIPV + DGLV VDMGPP L GP VPTTL      + +  PL V +Q W+VTCVSMGNPHAVVF+ +++++DL  +GP FE+HP FPA+INTEFV+V S
Sbjct:   50 VAFQKYHGLGNDFILVDNRHSTDPVMSPEQAARMCDRNFGVGGDGVIFALP-SESADYAMRIYNSDGSEPEMCGNGIRCMARFLQKLDGSEGTETTYTINTGAGPIIPVIRGDGLVTVDMGPPILEGPKVPTTLAPTQGDVVINAPLRVADQDWEVTCVSMGNPHAVVFIDNVDSLDLHHVGPQFESHPEFPARINTEFVEVKS 252          
BLAST of mRNA_C-tenellus_contig10041.1.1 vs. uniprot
Match: DAPF_ACAM1 (Diaminopimelate epimerase n=4 Tax=Acaryochloris TaxID=155977 RepID=DAPF_ACAM1)

HSP 1 Score: 273 bits (697), Expect = 2.340e-89
Identity = 132/208 (63.46%), Postives = 157/208 (75.48%), Query Frame = 1
Query:    1 MRVEVSFRKYQGLGNDFILVDNRESKDPQLSPEESEKLCDRRLGVGGDGVIFALPGQEGMDYSMRIYNSDGSEPEMCGNGIRCMARFLADLEGR---NNAVYKVHTLAGPIIPVAQEDGLVMVDMGPPELNGPSVPTTLPTNAEGIALEEPLEVGEQSWKVTCVSMGNPHAVVFVPDLEAIDLPTIGPLFETHPVFPAKINTEFVQVL 615
            MRVE  F KYQGLGNDFIL+DNR    P L+P+++ ++CDR  G+GGDGVIFALP +   DY+MRIYNSDGSEPEMCGNGIRC+ARFLA LEG+    +  Y++HTLAG I P  Q DGLV VDMGPP L    +PTTL    + + + +PLEV  QSW VTCVSMGNPH + FV DLEAID  T+GP FE HPVFP +INTEF+QV+
Sbjct:    1 MRVE--FTKYQGLGNDFILIDNRHQAQPCLTPDQAVQMCDRNFGIGGDGVIFALPPEGDTDYTMRIYNSDGSEPEMCGNGIRCLARFLAHLEGKPLQTDITYRIHTLAGTITPSLQADGLVKVDMGPPFLVPQEIPTTLGEGTDPV-VNQPLEVAGQSWPVTCVSMGNPHCITFVDDLEAIDFQTLGPQFEHHPVFPQRINTEFIQVI 205          
BLAST of mRNA_C-tenellus_contig10041.1.1 vs. uniprot
Match: A0A2I8A3T6_9NOSO (Diaminopimelate epimerase n=3 Tax=Nostocaceae TaxID=1162 RepID=A0A2I8A3T6_9NOSO)

HSP 1 Score: 270 bits (690), Expect = 2.380e-88
Identity = 128/204 (62.75%), Postives = 154/204 (75.49%), Query Frame = 1
Query:   13 VSFRKYQGLGNDFILVDNRESKDPQLSPEESEKLCDRRLGVGGDGVIFALPGQEGMDYSMRIYNSDGSEPEMCGNGIRCMARFLADLEG--RNNAVYKVHTLAGPIIPVAQEDGLVMVDMGPPELNGPSVPTTLPTNAEGIALEEPLEVGEQSWKVTCVSMGNPHAVVFVPDLEAIDLPTIGPLFETHPVFPAKINTEFVQVLS 618
            + F KY GLGNDFIL+DNR SK P LSPE++ +LCDR  G+G DGVIFALPG++  DY+MRI+NSDGSEPEMCGNGIRC+A F+ADLEG  RN   Y++HTLAG I P    DG + VDMG P L    +PTTL   A+G  + +PLEV  +SW VTCVSMGNPH + FVPD+ AI L TIGP FE HPVFP + NTEF++V+S
Sbjct:    3 IEFTKYHGLGNDFILIDNRASKTPVLSPEKAVQLCDRHFGIGADGVIFALPGEKDTDYTMRIFNSDGSEPEMCGNGIRCLAGFIADLEGISRNQDTYRIHTLAGVITPQLMPDGQIRVDMGLPRLLASEIPTTL-GGADGKVINQPLEVEGKSWDVTCVSMGNPHCITFVPDVAAIPLETIGPKFEHHPVFPQRTNTEFIEVVS 205          
BLAST of mRNA_C-tenellus_contig10041.1.1 vs. uniprot
Match: A0A8J5XME3_DIALT (Diaminopimelate epimerase n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XME3_DIALT)

HSP 1 Score: 270 bits (691), Expect = 4.150e-88
Identity = 130/206 (63.11%), Postives = 158/206 (76.70%), Query Frame = 1
Query:   10 EVSFRKYQGLGNDFILVDNRESKDPQLSPEESEKLCDRRLGVGGDGVIFALPGQEGMDYSMRIYNSDGSEPEMCGNGIRCMARFLADLEGRNNA-VYKVHTLAGPIIPVAQEDGLVMVDMGPPELNGPSVPTTLPTNAEGIALEEPLEVGEQSWKVTCVSMGNPHAVVFVPDLEAIDLP--TIGPLFETHPVFPAKINTEFVQVLS 618
            +++F KY G+GNDFILVDNR S++  L+P ++E++CDR  G+GGDGVIFALPG++G DY+MRI NSDGSEPEMCGNGIRCMA+F+A LEGR  +  Y + T AGPIIP    DGLV VDMG P L+G  VPTTLP +A G  +  PL+V  + W VTCVSMGNPHA+VFV  L+   LP  TIGPLFE H  FPA+ NTEFV+VLS
Sbjct:   25 QLAFSKYHGIGNDFILVDNRASRELLLTPAQAERMCDRNFGIGGDGVIFALPGEDGADYAMRIINSDGSEPEMCGNGIRCMAKFVAALEGRATSHTYTISTRAGPIIPALTADGLVAVDMGRPILDGAKVPTTLPADASGRVIGAPLDVAGRRWAVTCVSMGNPHAIVFVDSLDESSLPLSTIGPLFEKHAAFPARTNTEFVKVLS 230          
BLAST of mRNA_C-tenellus_contig10041.1.1 vs. uniprot
Match: A0A563W4X3_9CYAN (Diaminopimelate epimerase n=1 Tax=Hyella patelloides LEGE 07179 TaxID=945734 RepID=A0A563W4X3_9CYAN)

HSP 1 Score: 268 bits (684), Expect = 2.060e-87
Identity = 126/203 (62.07%), Postives = 156/203 (76.85%), Query Frame = 1
Query:   13 VSFRKYQGLGNDFILVDNRESKDPQLSPEESEKLCDRRLGVGGDGVIFALPGQEGMDYSMRIYNSDGSEPEMCGNGIRCMARFLADLEGRN--NAVYKVHTLAGPIIPVAQEDGLVMVDMGPPELNGPSVPTTLPTNAEGIALEEPLEVGEQSWKVTCVSMGNPHAVVFVPDLEAIDLPTIGPLFETHPVFPAKINTEFVQVL 615
            + F KY GLGNDFIL+DNR S +P ++PE++ ++CDR  G+GGDGVIFALPG+EG DY+MRIYNSDGSEPEMCGNGIRC+A+F+ADLEG++  N  YK+HTLAG I P  Q +G V VDMG P L    +PTTL T AE   + +PLEV  ++W VTCVS GNPH + FV + +AI L  IG LFE HPVFP +INTEF+QV+
Sbjct:    3 IEFSKYHGLGNDFILIDNRHSAEPIVTPEQAIQICDRHFGIGGDGVIFALPGKEGTDYTMRIYNSDGSEPEMCGNGIRCLAKFIADLEGKSEVNKTYKIHTLAGVITPQMQANGYVKVDMGTPFLTAAEIPTTLST-AEDKVIAQPLEVAGKTWDVTCVSTGNPHCITFVENSDAIALEQIGTLFEHHPVFPQRINTEFIQVV 204          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10041.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LFZ8_9PHAE2.640e-11477.72Diaminopimelate epimerase n=2 Tax=Ectocarpus TaxID... [more]
A0A835YU85_9STRA1.650e-10172.50Diaminopimelate epimerase n=1 Tax=Tribonema minus ... [more]
A0A7R9YC33_9STRA9.240e-9463.64Diaminopimelate epimerase n=2 Tax=Pinguiococcus py... [more]
A0A7S2HNF9_9STRA6.330e-9266.35Diaminopimelate epimerase n=1 Tax=Dictyocha specul... [more]
UPI0019EF3AFD6.230e-9164.22Diaminopimelate epimerase n=1 Tax=filamentous cyan... [more]
A0A7S2S1Q0_9STRA7.770e-9164.71Diaminopimelate epimerase n=2 Tax=Rhizochromulina ... [more]
DAPF_ACAM12.340e-8963.46Diaminopimelate epimerase n=4 Tax=Acaryochloris Ta... [more]
A0A2I8A3T6_9NOSO2.380e-8862.75Diaminopimelate epimerase n=3 Tax=Nostocaceae TaxI... [more]
A0A8J5XME3_DIALT4.150e-8863.11Diaminopimelate epimerase n=2 Tax=Diacronema luthe... [more]
A0A563W4X3_9CYAN2.060e-8762.07Diaminopimelate epimerase n=1 Tax=Hyella patelloid... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10041contigC-tenellus_contig10041:1925..5577 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7G034
PFAMsDAP_epimerase
Model size618
Max annot lvl2759|Eukaryota
KEGG rclassRC00302
KEGG koko:K01778
KEGG ReactionR02735
KEGG Pathwayko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230
KEGG ModuleM00016,M00525,M00527
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008837,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0016053,GO:0016853,GO:0016854,GO:0016855,GO:0019752,GO:0036361,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0046451,GO:0047661,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
Exons5
Evalue1.21e-115
EggNOG OGsCOG0253@1|root,2QQKJ@2759|Eukaryota
Ec32 ortholog descriptiondiaminopimelate epimerase
Ec32 orthologEc-06_009100.1
EC5.1.1.7
Descriptiondiaminopimelate epimerase activity
Cds size618
COG categoryE
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789111.8445904-CDS-C-tenellus_contig10041:1924..20461680789111.8445904-CDS-C-tenellus_contig10041:1924..2046Choristocarpus tenellus KU2346CDSC-tenellus_contig10041 1925..2046 +
1680789111.8551528-CDS-C-tenellus_contig10041:2383..24801680789111.8551528-CDS-C-tenellus_contig10041:2383..2480Choristocarpus tenellus KU2346CDSC-tenellus_contig10041 2384..2480 +
1680789111.8676646-CDS-C-tenellus_contig10041:2932..30461680789111.8676646-CDS-C-tenellus_contig10041:2932..3046Choristocarpus tenellus KU2346CDSC-tenellus_contig10041 2933..3046 +
1680789111.8787184-CDS-C-tenellus_contig10041:3800..39171680789111.8787184-CDS-C-tenellus_contig10041:3800..3917Choristocarpus tenellus KU2346CDSC-tenellus_contig10041 3801..3917 +
1680789111.8875844-CDS-C-tenellus_contig10041:5409..55771680789111.8875844-CDS-C-tenellus_contig10041:5409..5577Choristocarpus tenellus KU2346CDSC-tenellus_contig10041 5410..5577 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10041.1.1prot_C-tenellus_contig10041.1.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig10041 1925..5577 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig10041.1.1

>prot_C-tenellus_contig10041.1.1 ID=prot_C-tenellus_contig10041.1.1|Name=mRNA_C-tenellus_contig10041.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=206bp
MRVEVSFRKYQGLGNDFILVDNRESKDPQLSPEESEKLCDRRLGVGGDGV
IFALPGQEGMDYSMRIYNSDGSEPEMCGNGIRCMARFLADLEGRNNAVYK
VHTLAGPIIPVAQEDGLVMVDMGPPELNGPSVPTTLPTNAEGIALEEPLE
VGEQSWKVTCVSMGNPHAVVFVPDLEAIDLPTIGPLFETHPVFPAKINTE
FVQVLS
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mRNA from alignment at C-tenellus_contig10041:1925..5577+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig10041.1.1 ID=mRNA_C-tenellus_contig10041.1.1|Name=mRNA_C-tenellus_contig10041.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3653bp|location=Sequence derived from alignment at C-tenellus_contig10041:1925..5577+ (Choristocarpus tenellus KU2346)
ATGCGAGTTGAGGTCTCCTTCCGCAAATACCAGGGACTTGGCAATGATTT TATCTTGGTGGACAACCGGGAAAGTAAGGATCCACAACTTTCCCCCGAAG AGTCTGAAAAGCTTTGTGACAGGTGAGGACAGGAATTTCATTGATGCCTT GCTCTTTTTTGTGATTTTTTGTGATTTTTTGGTCTTGGTCGTGAGATAAC CTACCCATCACAGATCATCGTGACAAGACAACCATCACGCCAATGATGAT TGGATTGACCAGAGCGTAAGAAAAATTTCATTTGTGCTACTGATTGGCTT TGGAAAATCCTACCATCCGAGCTTCAGTGTGAACTGAAGTATCTTTTGTG AAGGTTGTCGAGTTCCTCTACCCAACGCAATTTGACGTGACGTACCCGAC TGCGTTCATGTGACGATGATCTACCCCTCTAACTTCTTTGCACCCATCTC TTTTTGCAGGCGCTTGGGTGTCGGAGGCGATGGAGTGATCTTCGCATTGC CTGGTCAGGAGGGCATGGACTATTCCATGCGTATCTACAATAGCGATGGC TCAGAGGTGATCTGACCTATTGCAACCGTATCCGATTCTGTTGCTCAGAC CCAAAGAGGGCTTCTTGTCATTGCGTGCTGCTCGAGTTGTATCTCCCCTG CCTCATGATCAAGATCGACGGGGGGCTATGAGCTCCTTCCGTATTCATAC GTAATTGTGTTTGTAGTACGTTGGTGCGTAGCCATTGTACTATATAGTAT ACGTGAAGCAGCAAAAGTCCACGAAACAAATATTCAACCCATAGCTCTTG TTGAACACTTTTTGCGCAATGTTTTCTGCGTTGTAGAACATTGCGTAAGG AAGCTGCATTCACATTCGAGCTCCCAATCACGCTGCACCTGCCTGTGCCT TTTCCATTGCCCCCACCTGCCCCCCGTATGGTCCGCCGTGTTCAATTGGG AGCCTTGACCCAGTATTTCTTACCTCTCATATACCCTTGCTCGTTGATGG TCTTTCAGCCAGAGATGTGTGGGAATGGTATTCGCTGCATGGCTCGATTC TTGGCAGACCTGGAGGGGAGGAACAATGCTGTGTACAAGGTTCATACCCT GGCAGGACCCATCATCCCTGTGGTGCGCTTATCAAGCTCAATTTCTCCTT CTTACCTGTTAACATGTTATCCTTGTCCTTGCTCTATTGTTCGTTCCTTT CTTCTTCCACCACTTGACCTTGTGGTTTGTGGAGTAGGTTCAAGTGCCCG GTGAGATACTGAATCGCTTTGCCTTAATTGTGGGTTAACCAGTGAGTGGA GATGAGCCTTTTTGCTCTTGTGTGTGCCACAAAGAAGCTTCAATAATTAA ATGCCACTGCATGTCGATGGAAACCATGTGTTGCAGAGCTAGTTTGTTAA AGCCATCGGAACAGGTGACAATGAGAGCACACTGAGTGACCTGCTAAGAG ATGCATTTTCCTATTGATATTGCGAATCATTAGCATGTGAAATTTTGCTG AGCTTCTGTGGAGTGTATTCCAGCGGCTTGTGTAAATACTCGCTCACTTT CTACGACTGACATGTAGTAGACCATCACAGTTCATGTGTGAATACAAATA GTTTTTCAGAGCTCAGTGAACAGCAGAGTTACCCTGTACTAGTATATATT GTGCTTGTTAATTGATGTCATGGAAATCCCTGTTGTGTCTTTGACTTGAC CTGCCCAGAGTTTTTTTTTTCAAGGTTGTCTCCCCAGGCAGATGCCATTT GTGATATCTGCATCATCTCATATGTTTGCATTTTGGGGTCTGATAGATAT GATAAGCAGGAACATGGTTATTACAATGTGCTAGTCCTCCAACCTCATGC ACAACCACTCTGTTGCAAGGGCACAGGCGCAAGAGGATGGTCTTGTCATG GTGGACATGGGACCACCTGAGCTTAATGGACCCTCTGTGCCAACAACGCT ACCCACCAATGCTGAGGGTATTGCCCTCGAGGAGCCTCTTGAGGTCAGCC GACTGGTCTATTGACAAGACACTAACGCTCCTTTGCAACTATTGTGTGTT ACGAGGGTTCCCCAATGCAAACCTTTCGAGTATTGCTGTCCTCTACTTGT GGCATATCAAGAGTCAAGAGCCTGATCAAGAGTAACGCCTGCAAATATTT TGCAGGCGTTGTCCCGAGTTGTCATTGCTTTCTGTTTATAGTTGTGGATG AGCTGGGTGCTTGTGGCTTTGCTGTTTACTGTGCTGTGTTGTGCTCTATT ATGTAATTGGTGGTCTTTTGCTTGGTTTGCCTTGATTGTCTGCCTGAATG GAAGTATCCTGTGTGTGCGGATTGCGGTGTACTGAAAATACTTGGTTCTT CACGAGAGTACAATATATAGAGGTAATAGAATTTCACCAGCGCTTGCAAT TCTCGTGCTCGATTTTTGTTGGTGAGACTAAAACTTGAGGTATGATGTGA GCAAGGAGATGTGAGTGGGATGAAATTTGTGAGCGTTGAAGGAGGGATGA CTTCGCTTCCTGTTGTAGGGATGGATATCTCTGTGGTCTATTCGCTTAGT AAGTACTGATTCGCTTCCCTATTACTCATTGTAGTTAGAGGAATACTAGT GTTTTGGTACACTTGTTGTAGGTGCTGTATGTCTTCAACAAGAGATTCTC CGAGATCATCAGCACTAGCTAGGGTGGCTTTTGTAGCTGATGCTACAAGG TCTTATTCTTGGTGTGGCAAGGAAGTAGGATTTTTATTGTATACTTGTCC TGCTTGCTCTCTATTCTTGGAATCTGTGGTTGTACCTGATATTCCTGCCC TTTGTGAAGCTCTAATCTCAGTGCCACCAATGGTAGATCCCATGCTGCAG TTTTTTGTTGGGGGGGGGGGGGGTGGCAGAGATCTCTGCTGCTTGATATG AGCAAGAAGGGAGATAGTCAATGGAGAGTCATCATTCAATAGTTTGATCT ATTAATAGTATGTACATACGATGTATGTGTGTATCTTACCTAGGATTTAG TATCCCATAGCAATGAATGTCTGAAGATTTGCCATGTTGGTGATACTTTT TCATTCCTGTTGTACGTATATTTTTCCACCTGCCCAAGTTGCTTGTGCAC TGCAATGCAATCTTGCCCAGTGCACTACTAGGGCTCCCATTTGTGGAACA GAATTTGAGTGGGGGCTTCAAGAGGTGCCTCCCAAAACCCCTCATTGCCC CTTGTGGTACTGCACACCTTTGTACTGGTTACCAGTATCCCATCACACGC CTTACTGTTTTTTAAACTCCTCATCAGTTCTATTCCTGTACCGGGTTGGT AGCACTCAATAATCCACCCTCCTGCCACAGAGCAGTCAGTGGTCGGTTAC CAATGCGCTACTGTAGGACACACACACACATCTGTGTATACAATCGCATC AACCTCCAACGCGCACATAACTGTACCTCATGCATCATTTTTTTCTTCTT TAATTTGGACCTTGGACTGCCCTGTAAAAATGCAGGTTGGTGAACAGAGC TGGAAGGTGACCTGCGTGAGCATGGGCAACCCACACGCCGTGGTGTTTGT ACCTGATTTGGAGGCGATAGACTTGCCCACCATCGGCCCGCTGTTTGAGA CTCATCCAGTCTTCCCGGCAAAGATCAACACAGAATTTGTGCAGGTGCTT TCT
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Coding sequence (CDS) from alignment at C-tenellus_contig10041:1925..5577+

>mRNA_C-tenellus_contig10041.1.1 ID=mRNA_C-tenellus_contig10041.1.1|Name=mRNA_C-tenellus_contig10041.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=618bp|location=Sequence derived from alignment at C-tenellus_contig10041:1925..5577+ (Choristocarpus tenellus KU2346)
ATGCGAGTTGAGGTCTCCTTCCGCAAATACCAGGGACTTGGCAATGATTT
TATCTTGGTGGACAACCGGGAAAGTAAGGATCCACAACTTTCCCCCGAAG
AGTCTGAAAAGCTTTGTGACAGGCGCTTGGGTGTCGGAGGCGATGGAGTG
ATCTTCGCATTGCCTGGTCAGGAGGGCATGGACTATTCCATGCGTATCTA
CAATAGCGATGGCTCAGAGCCAGAGATGTGTGGGAATGGTATTCGCTGCA
TGGCTCGATTCTTGGCAGACCTGGAGGGGAGGAACAATGCTGTGTACAAG
GTTCATACCCTGGCAGGACCCATCATCCCTGTGGCGCAAGAGGATGGTCT
TGTCATGGTGGACATGGGACCACCTGAGCTTAATGGACCCTCTGTGCCAA
CAACGCTACCCACCAATGCTGAGGGTATTGCCCTCGAGGAGCCTCTTGAG
GTTGGTGAACAGAGCTGGAAGGTGACCTGCGTGAGCATGGGCAACCCACA
CGCCGTGGTGTTTGTACCTGATTTGGAGGCGATAGACTTGCCCACCATCG
GCCCGCTGTTTGAGACTCATCCAGTCTTCCCGGCAAAGATCAACACAGAA
TTTGTGCAGGTGCTTTCT
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