mRNA_C-tenellus_contig10041.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10041.1.1 vs. uniprot
Match: A0A6H5LFZ8_9PHAE (Diaminopimelate epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LFZ8_9PHAE) HSP 1 Score: 338 bits (866), Expect = 2.640e-114 Identity = 157/202 (77.72%), Postives = 177/202 (87.62%), Query Frame = 1 Query: 13 VSFRKYQGLGNDFILVDNRESKDPQLSPEESEKLCDRRLGVGGDGVIFALPGQEGMDYSMRIYNSDGSEPEMCGNGIRCMARFLADLEGRNNAVYKVHTLAGPIIPVAQEDGLVMVDMGPPELNGPSVPTTLPTNAEGIALEEPLEVGEQSWKVTCVSMGNPHAVVFVPDLEAIDLPTIGPLFETHPVFPAKINTEFVQVLS 618 V F KYQGLGNDFILVDNRE +P L+ EES LCDRR G+GGDGVIFALPG + MDYSMRI NSDGSEPEMCGNGIRCMARFLADLEG+ A YK+HTLAG IIP+A+EDGLV VDMGPPELNGP VP+TLPTN +G+ L+EP++V + W+VTCVSMGNPHAVVFVPD++A+DLPTIGP FETHP FPAKINTEFVQVL+ Sbjct: 55 VPFSKYQGLGNDFILVDNREEAEPMLTAEESASLCDRRYGIGGDGVIFALPGSDDMDYSMRIINSDGSEPEMCGNGIRCMARFLADLEGKKKAEYKIHTLAGTIIPLAREDGLVTVDMGPPELNGPKVPSTLPTNDDGVVLKEPIKVDGKDWEVTCVSMGNPHAVVFVPDVDALDLPTIGPQFETHPSFPAKINTEFVQVLN 256
BLAST of mRNA_C-tenellus_contig10041.1.1 vs. uniprot
Match: A0A835YU85_9STRA (Diaminopimelate epimerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU85_9STRA) HSP 1 Score: 304 bits (779), Expect = 1.650e-101 Identity = 145/200 (72.50%), Postives = 160/200 (80.00%), Query Frame = 1 Query: 19 FRKYQGLGNDFILVDNRESKDPQLSPEESEKLCDRRLGVGGDGVIFALPGQEGMDYSMRIYNSDGSEPEMCGNGIRCMARFLADLEGRNNAVYKVHTLAGPIIPVAQEDGLVMVDMGPPELNGPSVPTTLPTNAEGIALEEPLEVGEQSWKVTCVSMGNPHAVVFVPDLEAIDLPTIGPLFETHPVFPAKINTEFVQVLS 618 F KY+GLGNDFILVDNRE+ DP LSPE+S KLCDR G+GGDGVIFALPG+ +DY MRIYNSDGSEPEMCGNGIRCMARFLADL+G A Y++ T AG I+PV GLV VDMGPPELNGP VPTTLPT A+G + PLEV Q W VTCVSMGNPHA+VFV DL I L IGPLFE + VFPA+ NTEFVQVLS Sbjct: 28 FHKYEGLGNDFILVDNRETADPVLSPEQSAKLCDRNFGIGGDGVIFALPGEGDLDYKMRIYNSDGSEPEMCGNGIRCMARFLADLDGEKEATYRIGTGAGLIVPVVGGGGLVTVDMGPPELNGPKVPTTLPTGADGAVVAAPLEVAGQQWSVTCVSMGNPHAIVFVNDLNTIKLADIGPLFEHNAVFPARTNTEFVQVLS 227
BLAST of mRNA_C-tenellus_contig10041.1.1 vs. uniprot
Match: A0A7R9YC33_9STRA (Diaminopimelate epimerase n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YC33_9STRA) HSP 1 Score: 285 bits (729), Expect = 9.240e-94 Identity = 133/209 (63.64%), Postives = 164/209 (78.47%), Query Frame = 1 Query: 10 EVSFRKYQGLGNDFILVDNRESKDPQLSPEESEKLCDRRLGVGGDGVIFALPGQEGMDYSMRIYNSDGSEPEMCGNGIRCMARFLADLEGRNNAV--YKVHTLAGPIIPVAQEDGLVMVDMGPPELNGPSVPTTL-PTNAEGIALEEPLEV---GEQSWKVTCVSMGNPHAVVFVPDLEAIDLPTIGPLFETHPVFPAKINTEFVQVLS 618 +V+F KYQGLGNDF+LVDNR++++P L+P+ESE LCDR GVG DGVIFA+PG++G DYSMRIYNSDGSEPEMCGNGIRCMA+FL DL+G + A YK+ TLAG ++P G++ VDMG PEL GP VPTTL PT + ++ P+ G + WKVTCVSMGNPH + FV DL+A+DL +GP FE HPVFPA++NTEFVQVLS Sbjct: 32 KVAFSKYQGLGNDFLLVDNRDAEEPILTPDESEALCDRHFGVGADGVIFAMPGRDGCDYSMRIYNSDGSEPEMCGNGIRCMAKFLQDLDGSSGAEKQYKIWTLAGTMVPTVVASGMITVDMGEPELRGPEVPTTLKPTRDDSAVIDAPMAAPLPGGKDWKVTCVSMGNPHCITFVDDLDAVDLAAVGPQFENHPVFPARVNTEFVQVLS 240
BLAST of mRNA_C-tenellus_contig10041.1.1 vs. uniprot
Match: A0A7S2HNF9_9STRA (Diaminopimelate epimerase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HNF9_9STRA) HSP 1 Score: 281 bits (718), Expect = 6.330e-92 Identity = 138/208 (66.35%), Postives = 161/208 (77.40%), Query Frame = 1 Query: 7 VEVSFRKYQGLGNDFILVDNRESKDPQLSPEESEKLCDRRLGVGGDGVIFALPGQEG-MDYSMRIYNSDGSEPEMCGNGIRCMARFLADLEGRNNAV---YKVHTLAGPIIPVAQEDGLVMVDMGPPELNGPSVPTTL-PTNAEGIALEEPLEVGEQSWKVTCVSMGNPHAVVFVPDLEAIDLPTIGPLFETHPVFPAKINTEFVQVL 615 V V F KYQGLGNDFIL+DNR+ +P L+P ++E++CDR GVGGDGVIFALP E DY MRIYNSDGSEPEMCGNGIRCM +F+ +EG Y + T AGPIIP +EDGLV VDMG P L G VPTTL PT ++G+ L+ PLEV Q W VTCVSMGNPHA+VFV DLEA+DL ++GP+FET+PVFPAKINTEFVQVL Sbjct: 41 VTVEFEKYQGLGNDFILIDNRDDPEPLLTPAQAERMCDRNFGVGGDGVIFALPASEAESDYRMRIYNSDGSEPEMCGNGIRCMTKFIQKIEGGAETAKESYHISTGAGPIIPKIREDGLVTVDMGFPILEGSKVPTTLQPTKSDGMVLDAPLEVMGQEWLVTCVSMGNPHAIVFVDDLEAVDLNSVGPVFETNPVFPAKINTEFVQVL 248
BLAST of mRNA_C-tenellus_contig10041.1.1 vs. uniprot
Match: UPI0019EF3AFD (Diaminopimelate epimerase n=1 Tax=filamentous cyanobacterium LEGE 11480 TaxID=2777977 RepID=UPI0019EF3AFD) HSP 1 Score: 276 bits (707), Expect = 6.230e-91 Identity = 131/204 (64.22%), Postives = 159/204 (77.94%), Query Frame = 1 Query: 7 VEVSFRKYQGLGNDFILVDNRESKDPQLSPEESEKLCDRRLGVGGDGVIFALPGQEGMDYSMRIYNSDGSEPEMCGNGIRCMARFLADLEGRN-NAVYKVHTLAGPIIPVAQEDGLVMVDMGPPELNGPSVPTTLPTNAEGIALEEPLEVGEQSWKVTCVSMGNPHAVVFVPDLEAIDLPTIGPLFETHPVFPAKINTEFVQVL 615 + + F KYQGLGNDFILVDNR+S +P+++PE++ KLCDR G+GGDGVIFALPGQ+G DY MRI+NSDGSEPEMCGNGIRCMARF+ADLEG N YK+HTLAG I+P DG V VDMG P L +PTTL T+A+ ++ +PLEV QSW+VTCVSMGNPH + FV + AIDL IGP FE+ FP KINTEF++V+ Sbjct: 1 MNLEFTKYQGLGNDFILVDNRDSTEPKVTPEQAVKLCDRHFGIGGDGVIFALPGQDGTDYMMRIFNSDGSEPEMCGNGIRCMARFIADLEGDNAKESYKIHTLAGLIVPKLTADGQVTVDMGQPRLQASEIPTTL-TDAQQQSVNQPLEVAGQSWQVTCVSMGNPHCITFVDSVAAIDLEKIGPQFESDAAFPKKINTEFIEVV 203
BLAST of mRNA_C-tenellus_contig10041.1.1 vs. uniprot
Match: A0A7S2S1Q0_9STRA (Diaminopimelate epimerase n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S1Q0_9STRA) HSP 1 Score: 278 bits (711), Expect = 7.770e-91 Identity = 132/204 (64.71%), Postives = 158/204 (77.45%), Query Frame = 1 Query: 13 VSFRKYQGLGNDFILVDNRESKDPQLSPEESEKLCDRRLGVGGDGVIFALPGQEGMDYSMRIYNSDGSEPEMCGNGIRCMARFLADLEGRNNA--VYKVHTLAGPIIPVAQEDGLVMVDMGPPELNGPSVPTTLPTNAEGIALEEPLEVGEQSWKVTCVSMGNPHAVVFVPDLEAIDLPTIGPLFETHPVFPAKINTEFVQVLS 618 V+F+KY GLGNDFILVDNR S DP +SPE++ ++CDR GVGGDGVIFALP E DY+MRIYNSDGSEPEMCGNGIRCMARFL L+G Y ++T AGPIIPV + DGLV VDMGPP L GP VPTTL + + PL V +Q W+VTCVSMGNPHAVVF+ +++++DL +GP FE+HP FPA+INTEFV+V S Sbjct: 50 VAFQKYHGLGNDFILVDNRHSTDPVMSPEQAARMCDRNFGVGGDGVIFALP-SESADYAMRIYNSDGSEPEMCGNGIRCMARFLQKLDGSEGTETTYTINTGAGPIIPVIRGDGLVTVDMGPPILEGPKVPTTLAPTQGDVVINAPLRVADQDWEVTCVSMGNPHAVVFIDNVDSLDLHHVGPQFESHPEFPARINTEFVEVKS 252
BLAST of mRNA_C-tenellus_contig10041.1.1 vs. uniprot
Match: DAPF_ACAM1 (Diaminopimelate epimerase n=4 Tax=Acaryochloris TaxID=155977 RepID=DAPF_ACAM1) HSP 1 Score: 273 bits (697), Expect = 2.340e-89 Identity = 132/208 (63.46%), Postives = 157/208 (75.48%), Query Frame = 1 Query: 1 MRVEVSFRKYQGLGNDFILVDNRESKDPQLSPEESEKLCDRRLGVGGDGVIFALPGQEGMDYSMRIYNSDGSEPEMCGNGIRCMARFLADLEGR---NNAVYKVHTLAGPIIPVAQEDGLVMVDMGPPELNGPSVPTTLPTNAEGIALEEPLEVGEQSWKVTCVSMGNPHAVVFVPDLEAIDLPTIGPLFETHPVFPAKINTEFVQVL 615 MRVE F KYQGLGNDFIL+DNR P L+P+++ ++CDR G+GGDGVIFALP + DY+MRIYNSDGSEPEMCGNGIRC+ARFLA LEG+ + Y++HTLAG I P Q DGLV VDMGPP L +PTTL + + + +PLEV QSW VTCVSMGNPH + FV DLEAID T+GP FE HPVFP +INTEF+QV+ Sbjct: 1 MRVE--FTKYQGLGNDFILIDNRHQAQPCLTPDQAVQMCDRNFGIGGDGVIFALPPEGDTDYTMRIYNSDGSEPEMCGNGIRCLARFLAHLEGKPLQTDITYRIHTLAGTITPSLQADGLVKVDMGPPFLVPQEIPTTLGEGTDPV-VNQPLEVAGQSWPVTCVSMGNPHCITFVDDLEAIDFQTLGPQFEHHPVFPQRINTEFIQVI 205
BLAST of mRNA_C-tenellus_contig10041.1.1 vs. uniprot
Match: A0A2I8A3T6_9NOSO (Diaminopimelate epimerase n=3 Tax=Nostocaceae TaxID=1162 RepID=A0A2I8A3T6_9NOSO) HSP 1 Score: 270 bits (690), Expect = 2.380e-88 Identity = 128/204 (62.75%), Postives = 154/204 (75.49%), Query Frame = 1 Query: 13 VSFRKYQGLGNDFILVDNRESKDPQLSPEESEKLCDRRLGVGGDGVIFALPGQEGMDYSMRIYNSDGSEPEMCGNGIRCMARFLADLEG--RNNAVYKVHTLAGPIIPVAQEDGLVMVDMGPPELNGPSVPTTLPTNAEGIALEEPLEVGEQSWKVTCVSMGNPHAVVFVPDLEAIDLPTIGPLFETHPVFPAKINTEFVQVLS 618 + F KY GLGNDFIL+DNR SK P LSPE++ +LCDR G+G DGVIFALPG++ DY+MRI+NSDGSEPEMCGNGIRC+A F+ADLEG RN Y++HTLAG I P DG + VDMG P L +PTTL A+G + +PLEV +SW VTCVSMGNPH + FVPD+ AI L TIGP FE HPVFP + NTEF++V+S Sbjct: 3 IEFTKYHGLGNDFILIDNRASKTPVLSPEKAVQLCDRHFGIGADGVIFALPGEKDTDYTMRIFNSDGSEPEMCGNGIRCLAGFIADLEGISRNQDTYRIHTLAGVITPQLMPDGQIRVDMGLPRLLASEIPTTL-GGADGKVINQPLEVEGKSWDVTCVSMGNPHCITFVPDVAAIPLETIGPKFEHHPVFPQRTNTEFIEVVS 205
BLAST of mRNA_C-tenellus_contig10041.1.1 vs. uniprot
Match: A0A8J5XME3_DIALT (Diaminopimelate epimerase n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XME3_DIALT) HSP 1 Score: 270 bits (691), Expect = 4.150e-88 Identity = 130/206 (63.11%), Postives = 158/206 (76.70%), Query Frame = 1 Query: 10 EVSFRKYQGLGNDFILVDNRESKDPQLSPEESEKLCDRRLGVGGDGVIFALPGQEGMDYSMRIYNSDGSEPEMCGNGIRCMARFLADLEGRNNA-VYKVHTLAGPIIPVAQEDGLVMVDMGPPELNGPSVPTTLPTNAEGIALEEPLEVGEQSWKVTCVSMGNPHAVVFVPDLEAIDLP--TIGPLFETHPVFPAKINTEFVQVLS 618 +++F KY G+GNDFILVDNR S++ L+P ++E++CDR G+GGDGVIFALPG++G DY+MRI NSDGSEPEMCGNGIRCMA+F+A LEGR + Y + T AGPIIP DGLV VDMG P L+G VPTTLP +A G + PL+V + W VTCVSMGNPHA+VFV L+ LP TIGPLFE H FPA+ NTEFV+VLS Sbjct: 25 QLAFSKYHGIGNDFILVDNRASRELLLTPAQAERMCDRNFGIGGDGVIFALPGEDGADYAMRIINSDGSEPEMCGNGIRCMAKFVAALEGRATSHTYTISTRAGPIIPALTADGLVAVDMGRPILDGAKVPTTLPADASGRVIGAPLDVAGRRWAVTCVSMGNPHAIVFVDSLDESSLPLSTIGPLFEKHAAFPARTNTEFVKVLS 230
BLAST of mRNA_C-tenellus_contig10041.1.1 vs. uniprot
Match: A0A563W4X3_9CYAN (Diaminopimelate epimerase n=1 Tax=Hyella patelloides LEGE 07179 TaxID=945734 RepID=A0A563W4X3_9CYAN) HSP 1 Score: 268 bits (684), Expect = 2.060e-87 Identity = 126/203 (62.07%), Postives = 156/203 (76.85%), Query Frame = 1 Query: 13 VSFRKYQGLGNDFILVDNRESKDPQLSPEESEKLCDRRLGVGGDGVIFALPGQEGMDYSMRIYNSDGSEPEMCGNGIRCMARFLADLEGRN--NAVYKVHTLAGPIIPVAQEDGLVMVDMGPPELNGPSVPTTLPTNAEGIALEEPLEVGEQSWKVTCVSMGNPHAVVFVPDLEAIDLPTIGPLFETHPVFPAKINTEFVQVL 615 + F KY GLGNDFIL+DNR S +P ++PE++ ++CDR G+GGDGVIFALPG+EG DY+MRIYNSDGSEPEMCGNGIRC+A+F+ADLEG++ N YK+HTLAG I P Q +G V VDMG P L +PTTL T AE + +PLEV ++W VTCVS GNPH + FV + +AI L IG LFE HPVFP +INTEF+QV+ Sbjct: 3 IEFSKYHGLGNDFILIDNRHSAEPIVTPEQAIQICDRHFGIGGDGVIFALPGKEGTDYTMRIYNSDGSEPEMCGNGIRCLAKFIADLEGKSEVNKTYKIHTLAGVITPQMQANGYVKVDMGTPFLTAAEIPTTLST-AEDKVIAQPLEVAGKTWDVTCVSTGNPHCITFVENSDAIALEQIGTLFEHHPVFPQRINTEFIQVV 204 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10041.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10041.1.1 >prot_C-tenellus_contig10041.1.1 ID=prot_C-tenellus_contig10041.1.1|Name=mRNA_C-tenellus_contig10041.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=206bp MRVEVSFRKYQGLGNDFILVDNRESKDPQLSPEESEKLCDRRLGVGGDGVback to top mRNA from alignment at C-tenellus_contig10041:1925..5577+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10041.1.1 ID=mRNA_C-tenellus_contig10041.1.1|Name=mRNA_C-tenellus_contig10041.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3653bp|location=Sequence derived from alignment at C-tenellus_contig10041:1925..5577+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10041:1925..5577+ >mRNA_C-tenellus_contig10041.1.1 ID=mRNA_C-tenellus_contig10041.1.1|Name=mRNA_C-tenellus_contig10041.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=618bp|location=Sequence derived from alignment at C-tenellus_contig10041:1925..5577+ (Choristocarpus tenellus KU2346)back to top |