mRNA_C-tenellus_contig10031.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10031.1.1 vs. uniprot
Match: A0A4C1WP54_EUMVA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=6 Tax=Eumeta variegata TaxID=151549 RepID=A0A4C1WP54_EUMVA) HSP 1 Score: 89.7 bits (221), Expect = 7.490e-18 Identity = 58/169 (34.32%), Postives = 82/169 (48.52%), Query Frame = 1 Query: 10 CETYKECKSEALSYQRSGRTPKQPGEVVHTDLVGPFKAD-ITDYQYFQVFVDESSRGKMVYGLKTKNAATDATAAYIDQMAR-EGIPVKCISGDGAGELGRSVKFQRMLANNGT*WRKSPPRTPQSNGIAERAIK*LMGAARSQLVKAGLGDEYWFFAITDLAFKTGVC 510 CE K L + S R ++ E+VHTD+VGPFK + +YF F+D+ SR VY LK K+ A +A Y Q R G +K + D E + + L N G R S RTPQ NG+AER + ++ AR L+++ L D +W A+ C Sbjct: 78 CEVCLRGKMTRLPFLASERQSEETLEIVHTDIVGPFKTQSVNGARYFITFIDDRSRWCEVYFLKQKSGALEAFKMYQTQAERVTGKKIKYLQSDNGKEY-CNAEMDNFLRNQGIQRRLSVVRTPQQNGVAERFNRTIVEMARCLLLQSSLSDMFWADAVATACHLRNRC 245
BLAST of mRNA_C-tenellus_contig10031.1.1 vs. uniprot
Match: W8ADM5_CERCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Ceratitis capitata TaxID=7213 RepID=W8ADM5_CERCA) HSP 1 Score: 89.4 bits (220), Expect = 1.770e-17 Identity = 53/150 (35.33%), Postives = 80/150 (53.33%), Query Frame = 1 Query: 52 QRSGRTPKQPGEVVHTDLVGPF-KADITDYQYFQVFVDESSRGKMVYGLKTKNAATDATAAYIDQMARE-GIPVKCISGDGAGELGRSVKFQRMLANNGT*WRKSPPRTPQSNGIAERAIK*LMGAARSQLVKAGLGDEYWFFAITDLAF 495 Q S K+ E++HTD+ GP K I +YF F+D+ SR K VY LK+K+ A ++ ++ +K + D E S F+ L NG + + P TPQ NG+AERA + L+ ARS +V +GLG+ +W A+ A+ Sbjct: 449 QESKNRAKKLCEIIHTDICGPINKKSIGGSRYFATFIDDMSRYKCVYFLKSKDEIFSAFKSFKAMAEKQTNCKIKILRSDNGREY-LSKNFENFLKENGIVRQLTVPYTPQQNGVAERANRTLVEMARSMIVHSGLGECFWAEAVATAAY 597
BLAST of mRNA_C-tenellus_contig10031.1.1 vs. uniprot
Match: A0A4C1V7J1_EUMVA (Copia protein n=2 Tax=Eumeta variegata TaxID=151549 RepID=A0A4C1V7J1_EUMVA) HSP 1 Score: 88.2 bits (217), Expect = 3.660e-17 Identity = 55/158 (34.81%), Postives = 79/158 (50.00%), Query Frame = 1 Query: 43 LSYQRSGRTPKQPGEVVHTDLVGPFKAD-ITDYQYFQVFVDESSRGKMVYGLKTKNAATDATAAYIDQMAR-EGIPVKCISGDGAGELGRSVKFQRMLANNGT*WRKSPPRTPQSNGIAERAIK*LMGAARSQLVKAGLGDEYWFFAITDLAFKTGVC 510 L + S R ++ E+VHTD+VGPFK + +YF F+D+ SR VY LK K+ A +A Y Q R G +K + D E + + L N G R S RTPQ NG+AER + ++ AR L+++ L D +W A+ C Sbjct: 4 LPFLASERQSEETLEIVHTDIVGPFKTQSVNGARYFITFIDDRSRWCEVYFLKQKSGALEAFKMYQTQAERVTGKKIKYLQSDNGKEY-CNAEMDNFLRNQGIQRRLSVVRTPQQNGVAERFNRTIVEMARCLLLQSSLSDMFWADAVATACHLRNRC 160
BLAST of mRNA_C-tenellus_contig10031.1.1 vs. uniprot
Match: A0A4C1XAK2_EUMVA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Eumeta variegata TaxID=151549 RepID=A0A4C1XAK2_EUMVA) HSP 1 Score: 87.0 bits (214), Expect = 1.020e-16 Identity = 54/153 (35.29%), Postives = 77/153 (50.33%), Query Frame = 1 Query: 58 SGRTPKQPGEVVHTDLVGPFKAD-ITDYQYFQVFVDESSRGKMVYGLKTKNAATDATAAYIDQMAR-EGIPVKCISGDGAGELGRSVKFQRMLANNGT*WRKSPPRTPQSNGIAERAIK*LMGAARSQLVKAGLGDEYWFFAITDLAFKTGVC 510 S R ++ E+VHTD+VGPFK + +YF F+D+ SR VY LK K+ A +A Y Q R G +K + D E + + L N G R S RTPQ NG+AER + ++ AR L+++ L D +W A+ C Sbjct: 260 SERQSEETLEIVHTDIVGPFKTQSVNGARYFITFIDDRSRWCEVYFLKQKSGALEAFKMYQTQAERVTGKKIKYLQSDNGKEY-CNAEMDNFLRNQGIQRRLSVVRTPQQNGVAERFNRTIVEMARCLLLQSSLSDMFWADAVATACHLRNRC 411
BLAST of mRNA_C-tenellus_contig10031.1.1 vs. uniprot
Match: A0A4C1YKI8_EUMVA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Eumeta variegata TaxID=151549 RepID=A0A4C1YKI8_EUMVA) HSP 1 Score: 87.0 bits (214), Expect = 1.060e-16 Identity = 54/153 (35.29%), Postives = 77/153 (50.33%), Query Frame = 1 Query: 58 SGRTPKQPGEVVHTDLVGPFKAD-ITDYQYFQVFVDESSRGKMVYGLKTKNAATDATAAYIDQMAR-EGIPVKCISGDGAGELGRSVKFQRMLANNGT*WRKSPPRTPQSNGIAERAIK*LMGAARSQLVKAGLGDEYWFFAITDLAFKTGVC 510 S R ++ E+VHTD+VGPFK + +YF F+D+ SR VY LK K+ A +A Y Q R G +K + D E + + L N G R S RTPQ NG+AER + ++ AR L+++ L D +W A+ C Sbjct: 454 SERQSEETLEIVHTDIVGPFKTQSVNGARYFITFIDDRSRWCEVYFLKQKSGALEAFKMYQTQAERVTGKKIKYLQSDNGKEY-CNAEMDNFLRNQGIQRRLSVVRTPQQNGVAERFNRTIVEMARCLLLQSSLSDMFWADAVATACHLRNRC 605
BLAST of mRNA_C-tenellus_contig10031.1.1 vs. uniprot
Match: A0A2D5QAQ1_9EURY (Uncharacterized protein (Fragment) n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A2D5QAQ1_9EURY) HSP 1 Score: 86.7 bits (213), Expect = 1.620e-16 Identity = 55/158 (34.81%), Postives = 87/158 (55.06%), Query Frame = 1 Query: 55 RSGRTPKQPGE--------VVHTDLVGPFKAD-ITDYQYFQVFVDESSRGKMVYGLKTKNAATDATAAYIDQMAREGIPVKCISGDGAGELGRSVK--FQRMLANNGT*WRKSPPRTPQSNGIAERAIK*LMGAARSQLVKAGLGDEYWFFAITDLAF 495 ++ RTP + E +VHTDL GPF+ + + Y Q+FVD+++R K Y L+TKN AT ++ + G+PV CI DG GE + + + G +K+ P +P+SNG+AERA + L+ AR+ ++ A + E W +A+ AF Sbjct: 1789 KATRTPHKRNEFETHYALQLVHTDLTGPFEVEGHGGFFYAQIFVDDNTRRKFPYFLRTKNQATTMLRRFVRDV---GLPV-CIRLDGGGEFEGAFEEGWIDTCIELGIKLQKTDPESPESNGVAERANRTLITIARTMMLAAAVPKELWPYAVQHAAF 1942
BLAST of mRNA_C-tenellus_contig10031.1.1 vs. uniprot
Match: UPI001004C95A (uncharacterized protein LOC114075238 n=1 Tax=Solanum pennellii TaxID=28526 RepID=UPI001004C95A) HSP 1 Score: 85.1 bits (209), Expect = 5.510e-16 Identity = 51/139 (36.69%), Postives = 72/139 (51.80%), Query Frame = 1 Query: 85 EVVHTDLVGPFKA-DITDYQYFQVFVDESSRGKMVYGLKTKNAATDATAAYIDQMARE-GIPVKCISGDGAGELGRSVKFQRMLANNGT*WRKSPPRTPQSNGIAERAIK*LMGAARSQLVKAGLGDEYWFFAITDLAF 495 E+VH+DL GPFK YF F+D+ SR V+ LK+K+ D ++ + R+ G +KCI D GE F R G +K+PP+TPQ NG+AER + L+ R L A L D +W A+ A+ Sbjct: 648 ELVHSDLCGPFKVRSHGGALYFVTFIDDHSRKLWVFPLKSKDQVLDVFKSFQALVERQTGKTLKCIRSDNGGEY--IGPFDRYCREQGIRHQKTPPKTPQLNGLAERMNRTLVERVRCMLSDAKLSDSFWAEALNTAAY 784
BLAST of mRNA_C-tenellus_contig10031.1.1 vs. uniprot
Match: B3Y003_BOMMO (Polyprotein n=1 Tax=Bombyx mori TaxID=7091 RepID=B3Y003_BOMMO) HSP 1 Score: 84.7 bits (208), Expect = 7.180e-16 Identity = 41/120 (34.17%), Postives = 66/120 (55.00%), Query Frame = 1 Query: 79 PGEVVHTDLVGPFKADITDYQYFQVFVDESSRGKMVYGLKTKNAATDATAAYIDQMAREGIPVKCISGDGAGELGRSVKFQRMLANNGT*WRKSPPRTPQSNGIAERAIK*LMGAARSQL 438 PGE+VHTD+ GPF+ ++Y+Y+ +F D+ + +MVY ++ K+ D I Q G +KC+ D GE + +L +G R P TP+ NG++ER + L+ ARS + Sbjct: 491 PGEIVHTDVCGPFQPSFSNYKYYVLFKDDFTGYRMVYFIRKKSEVKDKLVLMIAQTKTVGYTIKCLLSDNGGEFD-NASINNVLDTHGIAQRLVTPYTPEQNGVSERENRTLVETARSMM 609
BLAST of mRNA_C-tenellus_contig10031.1.1 vs. uniprot
Match: UPI00067B46BF (retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Amyelois transitella TaxID=680683 RepID=UPI00067B46BF) HSP 1 Score: 83.2 bits (204), Expect = 2.480e-15 Identity = 52/161 (32.30%), Postives = 80/161 (49.69%), Query Frame = 1 Query: 37 EALSYQRSGRTP-------KQPGEVVHTDLVGPFKADITDYQYFQVFVDESSRGKMVYGLKTKNAATDATAAYIDQMAREGIPVKCISGDGAGELGRSVKFQRMLANNGT*WRKSPPRTPQSNGIAERAIK*LMGAARSQLVKAG-LGDEYWFFAITDLAF 495 E Y +S R P K GE++HTD+ GPF I+ YQY+ +F D+ S +MVY ++ K+ D + ++ G VK + D GE + +++L G R + P TP+ NG +ER + L+ AARS + G L W I +A+ Sbjct: 476 EGCIYGKSHRKPFGTRERAKAVGELIHTDVCGPFAKSISKYQYYVLFKDDYSSYRMVYFIRHKSEVKDKLLLMLQEVKNAGHTVKTLLSDNGGEF-NNENVRKILQRYGIQQRLTMPYTPEQNGCSERENRTLVEAARSIMHARGELPQVLWAELINTVAY 635
BLAST of mRNA_C-tenellus_contig10031.1.1 vs. uniprot
Match: A0A8I6TLX8_CIMLE (Integrase catalytic domain-containing protein n=1 Tax=Cimex lectularius TaxID=79782 RepID=A0A8I6TLX8_CIMLE) HSP 1 Score: 82.8 bits (203), Expect = 3.180e-15 Identity = 54/165 (32.73%), Postives = 86/165 (52.12%), Query Frame = 1 Query: 10 CETYKECKSEALSYQRSGRTPKQPGEVVHTDLVGPFKA-DITDYQYFQVFVDESSRGKMVYGLKTKNAATDATAAYIDQMARE-GIPVKCISGDGAGE-LGRSVKFQRMLANNGT*WRKSPPRTPQSNGIAERAIK*LMGAARSQLVKAGLGDEYWFFAITDLAF 495 CE + K L ++RS ++P E+VHTDL GP + I +YF + +D+ SR M+Y LK+K+ T Y + E + +K + D E + R++ + L G +++ TPQ NG+AERA + ++ AR L AGL EYW A++ + Sbjct: 21 CEVCIKGKHVRLPFKRSKFRAQKPLELVHTDLCGPMETKSIGGNRYFFILIDDYSRYTMIYFLKSKDEVTQVFKEYCALVENEMNLQIKTLRSDNGMEYINRNM--ENFLREKGIKHQRTVRYTPQQNGLAERANRAIVDKARCLLQDAGLPKEYWAEAVSTAVY 183 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10031.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10031.1.1 >prot_C-tenellus_contig10031.1.1 ID=prot_C-tenellus_contig10031.1.1|Name=mRNA_C-tenellus_contig10031.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=116bp ELQCETYKECKSEALSYQRSGRTPKQPGEVVHTDLVGPFKADITDYQYFQback to top mRNA from alignment at C-tenellus_contig10031:4366..4895+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10031.1.1 ID=mRNA_C-tenellus_contig10031.1.1|Name=mRNA_C-tenellus_contig10031.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=530bp|location=Sequence derived from alignment at C-tenellus_contig10031:4366..4895+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10031:4366..4895+ >mRNA_C-tenellus_contig10031.1.1 ID=mRNA_C-tenellus_contig10031.1.1|Name=mRNA_C-tenellus_contig10031.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=348bp|location=Sequence derived from alignment at C-tenellus_contig10031:4366..4895+ (Choristocarpus tenellus KU2346)back to top |