mRNA_C-tenellus_contig1003.3.12 (mRNA) Choristocarpus tenellus KU2346
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Overview
Homology
BLAST of mRNA_C-tenellus_contig1003.3.12 vs. uniprot
Match: A0A6H5JN08_9PHAE (BTB domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN08_9PHAE) HSP 1 Score: 572 bits (1475), Expect = 9.620e-188 Identity = 374/821 (45.55%), Postives = 450/821 (54.81%), Query Frame = 1
Query: 1 GPWQVRGKRSKA--SLRSVFRLDDDLTGLQQTMLAMLGTPELHDVVLCVESIDIPCHKAVLAAWSKPFEAMFTLPMRESAHGCRVLIEDAEHKHFMAMIEYMYSGRLNLQDNNVMPVMSLANRYGVKRLMEQCEGYTKWRLNPGNVCRHLVAAELHQCESMVAYALEYLAFHFYEVHHENSSSFELLTGDLVLRVLQHEGLTVDEETVFLAVDGWAKAWRRRLAYSTQTETYEQIQYINSWDRQSSPPTPTQELPNSQTTEIEPGSSPSKQRGGRDKLEGEEGSSPGHYV---LGGDNLHCSGGVTEVDMVEGPMEGVGGGSNCGSVN----GSASREAEGGRXXXXXXXXXXXXXXGAVRSSGNETPSVTQDGSSEEGVEVQGGEVGAGDFGEGVVPVLEA-------------------------------------------------GEGENVQSLVAGGGLGRGRLNLCGGSSITPLPSRAQPLPP---LQHTQSWPGVSFGGK----GNQASLSV-RGKAVTPLPLRPCLSAPDQ------TTDTPQPSLSAPHPTPKEEVRPRGMFFPNYNPKLCLINSWFPIE--VDCQVGDTDVWTAMPDEEKVWVDRIFQEVRFPLIATSFLCQVVENSSVVAASKVMQHLLHEAYRFQAIRPESNEVDDHFPGNHRAKYRGYERVLFGEDEGCVGTVEDYSSSLSEVHLVEHVFTRDEKYWLPGQPEEAYLCITLDRVRRITKFRFQNRYSQEFEVAVRRTRREEWQVIVPHQPSGGHKDIKELDLIRKRVKARHVRVSLRGRKSPFYNTSLYWAELLGF 2241
GPW ++S + S + LDDDL GLQ+TML+ML P L DV L VE ID+PCHKAVLAAWS+PF AMFTLPM ES H CRV+IEDAEHKH M ++ Y+YSG + L D NVMPV +LANRY V LM QCEGY KWRL+P NV HL++AE H+ A+ALEYLA HF EVHH+ S F L GD VLRVLQH+GLTVDEETVFLAVDGWAKAW R + T Y + SPP E Q T+ S SK+ GSS H V L + S T V+ E GGG+ G+ + ++S E +RS+ T + ++ G + E G +G+ GE + V + +++ S+ +R+ P L S G S G G++ V G+A L R SA + + Q + S HP + + NS PIE D G + +P+EE+ +VD + EVRFPL++TSFLCQVVE S V+ S+V Q LLHEAYRFQAIRP+ +VD+ FPGNHR KYRG+ERVLFGEDEGCVG VEDYSSSLSEVHLVE+V RDEKYWLPGQPEEAY C+ LDRVRRITKFR QNRYS+EFEVAVRRTRREEWQVIVP Q SGGHKD+K LDL RKRVKARHV++SLRGR YNTS YW ELLGF
Sbjct: 7 GPWSGASRKSHRIPARNSAWSLDDDLVGLQKTMLSMLTDPALSDVCLVVEDIDVPCHKAVLAAWSRPFRAMFTLPMLESRHQCRVVIEDAEHKHLMVVLHYLYSGCIGLNDQNVMPVSALANRYEVLPLMAQCEGYMKWRLHPSNVVAHLLSAEEHRVPKAAAFALEYLAVHFDEVHHDGSGDFNSLGGDTVLRVLQHDGLTVDEETVFLAVDGWAKAWEHRRSIRGATRNYAVGR---------SPPPAVAE----QGTQAVGVGSTSKR-----------GSSSSHSVKKTLSATDFPPSTSTTVPGRVQDTDEQGGGGAGSGARSVVRDAASSASLEKNPRSLNGRERPDLGAGFTLRSTTEGTSAQSRVGGTRETDSRGGSSIGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRLRGEEQAVTRRPSSSTGPTCNVSITTASNTAMRDTRSDASPGARGLGGRGSIGGASEGRSTMDVGDEPPKGVAEGEAGRVLQRRASGSAGGEGKQGGYAGEVLQRAASFWHPPXXXXXXVANV---RKAAAVSSPNSSSPIEGMTDEGKGTLETMVPIPEEEQAFVDELLMEVRFPLVSTSFLCQVVEKSPVITGSRVAQRLLHEAYRFQAIRPDGVDVDELFPGNHRVKYRGHERVLFGEDEGCVGHVEDYSSSLSEVHLVENVKQRDEKYWLPGQPEEAYFCVRLDRVRRITKFRLQNRYSEEFEVAVRRTRREEWQVIVPRQTSGGHKDVKSLDLTRKRVKARHVKISLRGRTRSCYNTSCYWVELLGF 800
BLAST of mRNA_C-tenellus_contig1003.3.12 vs. uniprot
Match: D7FIB0_ECTSI (BTB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIB0_ECTSI) HSP 1 Score: 421 bits (1083), Expect = 3.220e-134 Identity = 270/635 (42.52%), Postives = 318/635 (50.08%), Query Frame = 1
Query: 91 MLAMLGTPELHDVVLCVESIDIPCHKAVLAAWSKPFEAMFTLPMRESAHGCRVLIEDAEHKHFMAMIEYMYSGRLNLQDNNVMPVMSLANRYGVKRLMEQCEGYTKWRLNPGNVCRHLVAAELHQCESMVAYALEYLAFHFYEVHHENSSSFELLTGDLVLRVLQHEGLTVDEETVFLAVDGWAKAWRRRLAYSTQTETYEQIQYINSWDRQSSPPTPTQELPNSQTTEIEPGSSPSKQRGGRDKLEGEEGSSPGHYVLGGDNLHCSGGVTEVDMVEGPMEGVGGGSNCGSVNGSASREAEGGRXXXXXXXXXXXXXXGAVRSS---GNETPSVTQDGSSEEGVEVQGGEVGAGDFGEGVVPVLEAGEGENVQSLVAGGGLGRGRLNLCGGSSITPLPSRAQPLPPLQHTQSWPGVSFGGKGNQASLSVRGKAVTPLPLRPCLSAPDQTTDTPQPSLSAPHPTPKEEVRPRGMFFPNYNPKLCLINSWFPIE--VDCQVGDTDVWTAMPDEEKVWVDRIFQEVRFPLIATSFLCQVVENSSVVAASKVMQHLLHEAYRFQAIRPESNEVDDHFPGNHRAKYRGYERVLFGEDEGCVGTVEDYSSSLSEVHLVEHVFTRDEKYWLPGQPEEAYLCI 1980
ML+ML P L DV L VE ID+PCHKAVLAAWS+PF AMFTLPM ES H CRV+IEDAEHKH M ++ Y+YSGR+ L D NVMPV +LANRY V LM QCEGY KWRL+P NV HL++AE H+ A+ALEYLA HF EVHH++S F L GD VLRVLQH+GLTVDEETVFLAVDGWAKAW R + T Y +S PP E+ +SPG GG RE+ GG G RS+ G+E P +G + GR+ LQ S P GG+G Q + S HP P E G+ + S PIE D + G + +P+EE+ +VD + EVRFPL++TSFLCQVVE S V+ S+V Q LLHEAYRFQAIRP+ +VD+ FPGNHR KYRG+ERVLFGEDEGCVG VEDYSSSLSEVHLVE+V RDEKYWLPGQPEEAY C+
Sbjct: 1 MLSMLTDPALSDVCLVVEGIDVPCHKAVLAAWSRPFRAMFTLPMLESRHQCRVVIEDAEHKHLMVVLHYLYSGRIGLNDQNVMPVSALANRYEVLPLMAQCEGYMKWRLHPSNVVAHLLSAEEHRVPKAAAFALEYLAVHFDEVHHDSSGDFNSLGGDTVLRVLQHDGLTVDEETVFLAVDGWAKAWEHRRSIRGATRNYAV--------GRSPPPAVA-----------------------------EQDASPGARGWGG------------------------------------RESNGGA--------------GEERSTMDVGDEPPKGLAEGEA-------------------------------------------GRV--------------------LQRRASGPA---GGEGKQGGYXXXXXXX---------------------AASFSHPPPXXEPPVAGV---RKTAAVGAPESSSPIEGMTDERKGTLETMAPIPEEEQAFVDELLMEVRFPLVSTSFLCQVVEKSPVITGSRVAQRLLHEAYRFQAIRPDGVDVDELFPGNHRVKYRGHERVLFGEDEGCVGHVEDYSSSLSEVHLVENVKQRDEKYWLPGQPEEAYFCV 458
BLAST of mRNA_C-tenellus_contig1003.3.12 vs. uniprot
Match: A0A7S2Q045_9DINO (Hypothetical protein n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2Q045_9DINO) HSP 1 Score: 94.4 bits (233), Expect = 4.020e-18 Identity = 56/164 (34.15%), Postives = 83/164 (50.61%), Query Frame = 1
Query: 100 MLGTPELHDVVLCVESIDIPCHKAVLAAWSKPFEAMFTLPMRESAHGCRVLIEDAEHKHFMAMIEYMYSGRLNLQDNNVMPVMSLANRYGVKRLMEQCEGYTKWRLNPGNVCRHLVAAELHQCESMVAYALEYLAFHFYEVHHENSSSFELLTGD--LVLRVLQ 585
+L DV V + + H+AVLAA S F AM RE+ G V++ D + F A++ Y+YS RL L D +VM VM A++YG+ L C Y ++ NV L+AAE H E + ++L + A H + +S F L L++R+LQ
Sbjct: 43 LLADGTFADVTFAVAGVQVRAHRAVLAARSSYFHAMLHSGCREAQPGAVVVVPDVSEEAFRALLAYVYSDRLELNDQSVMDVMCKAHQYGMLPLYIHCMRYVVHHISKDNVVAWLIAAEAHNLEESLKFSLRFAATHLRGIRKGDSDQFAGLQDHPRLMMRILQ 206
BLAST of mRNA_C-tenellus_contig1003.3.12 vs. uniprot
Match: UPI001EB09130 (kelch-like protein 3 n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI001EB09130) HSP 1 Score: 96.7 bits (239), Expect = 1.160e-17 Identity = 61/177 (34.46%), Postives = 100/177 (56.50%), Query Frame = 1
Query: 118 LHDVVLCVESIDIPCHKAVLAAWSKPFEAMFTLPMRESAHGCRVLIEDAEHKHFMAMIEYMYSGRLNLQDNNVMPVMSLANRYGVKRLMEQCEGYTKWRLNPGNVCRHLVAAELHQCESMVAYALEYLAFHFYEVHHENSSSFELLTGDLVLRVLQHEGLTV-DEETVFLAVDGWAK 645
L D+VL V+S++IP HKA+L++ S+ F AMFT M E A R+ +++ + K +IE++Y+ +++ ++NV ++ AN + + E C + + +L+P N A+LH C + YA Y HF EV H + F L+ + V R++ + LTV EE VF AV W +
Sbjct: 55 LCDIVLVVDSVEIPSHKAILSSCSQYFYAMFTGEMAE-AKANRITLQEIDAKALSLLIEFVYTSEIHVTEDNVQTLLPAANILQMTEVREACCEFLQAQLHPSNSLGIRDFADLHACTDLNNYAQTYTEQHFTEVVHYDE--FLSLSENQVARLISSDRLTVTSEEQVFEAVMSWVQ 228
BLAST of mRNA_C-tenellus_contig1003.3.12 vs. uniprot
Match: UPI00201F8F0E (kelch-like protein 2 isoform X2 n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201F8F0E) HSP 1 Score: 96.7 bits (239), Expect = 6.660e-17 Identity = 61/177 (34.46%), Postives = 100/177 (56.50%), Query Frame = 1
Query: 118 LHDVVLCVESIDIPCHKAVLAAWSKPFEAMFTLPMRESAHGCRVLIEDAEHKHFMAMIEYMYSGRLNLQDNNVMPVMSLANRYGVKRLMEQCEGYTKWRLNPGNVCRHLVAAELHQCESMVAYALEYLAFHFYEVHHENSSSFELLTGDLVLRVLQHEGLTV-DEETVFLAVDGWAK 645
L D+VL V+S++IP HKA+L++ S+ F AMFT M E A R+ +++ + K +IE++Y+ +++ ++NV ++ AN + + E C + + +L+P N A+LH C + YA Y HF EV H + F L+ + V R++ + LTV EE VF AV W +
Sbjct: 55 LCDIVLVVDSVEIPSHKAILSSCSQYFYAMFTGEMAE-AKANRITLQEIDAKALSLLIEFVYTSEIHVTEDNVQTLLPAANILQMTEVREACCEFLQAQLHPSNSLGIRDFADLHACTDLNNYAQTYTEQHFTEVVHYDE--FLSLSENQVARLISSDRLTVTSEEQVFEAVMSWVQ 228
BLAST of mRNA_C-tenellus_contig1003.3.12 vs. uniprot
Match: UPI00201EE9DB (kelch-like protein 3 isoform X1 n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201EE9DB) HSP 1 Score: 96.7 bits (239), Expect = 7.310e-17 Identity = 61/177 (34.46%), Postives = 100/177 (56.50%), Query Frame = 1
Query: 118 LHDVVLCVESIDIPCHKAVLAAWSKPFEAMFTLPMRESAHGCRVLIEDAEHKHFMAMIEYMYSGRLNLQDNNVMPVMSLANRYGVKRLMEQCEGYTKWRLNPGNVCRHLVAAELHQCESMVAYALEYLAFHFYEVHHENSSSFELLTGDLVLRVLQHEGLTV-DEETVFLAVDGWAK 645
L D+VL V+S++IP HKA+L++ S+ F AMFT M E A R+ +++ + K +IE++Y+ +++ ++NV ++ AN + + E C + + +L+P N A+LH C + YA Y HF EV H + F L+ + V R++ + LTV EE VF AV W +
Sbjct: 55 LCDIVLVVDSVEIPSHKAILSSCSQYFYAMFTGEMAE-AKANRITLQEIDAKALSLLIEFVYTSEIHVTEDNVQTLLPAANILQMTEVREACCEFLQAQLHPSNSLGIRDFADLHACTDLNNYAQTYTEQHFTEVVHYDE--FLSLSENQVARLISSDRLTVTSEEQVFEAVMSWVQ 228
BLAST of mRNA_C-tenellus_contig1003.3.12 vs. uniprot
Match: UPI0015E22DB4 (LOW QUALITY PROTEIN: kelch-like protein 6 n=2 Tax=Percomorphaceae TaxID=1489872 RepID=UPI0015E22DB4) HSP 1 Score: 96.7 bits (239), Expect = 7.700e-17 Identity = 67/191 (35.08%), Postives = 101/191 (52.88%), Query Frame = 1
Query: 79 LQQTMLAMLGTPELHDVVLCVESIDIPCHKAVLAAWSKPFEAMFTLPMRESAHGCRVLIEDAEHKHFMAMIEYMYSGRLNLQDNNVMPVMSLANRYGVKRLMEQCEGYTKWRLNPGNVCRHLVAAELHQCESMVAYALEYLAFHFYEVHHENSSSFELLTGDLVLRVLQHEGLTVD-EETVFLAVDGWAKA 648
LQ+ M + EL DVVLCV+ D PCH+A+LAA S F AMF ++ES H RV I+ + +++EY Y+ R L +NV ++ A+++ R+++ C G+ L+ + L AE H ++ A +Y+ HF EV + F L D + VLQ + L V EE VF A+ W +A
Sbjct: 46 LQRGMETLRVNRELTDVVLCVQGHDFPCHRAILAAASHYFRAMFCSGLKES-HEERVEIKGLDSGTMRSLLEYTYTSRAILTHSNVQRILEAASQFQFLRVVDACAGFLNKSLHLESCIGILNLAESHALPALKTGAQDYITSHFSEVVQQQD--FLDLPADSLENVLQCDKLDVKCEECVFEALMRWVRA 233
BLAST of mRNA_C-tenellus_contig1003.3.12 vs. uniprot
Match: A0A673AUH6_9TELE (Kelch like family member 6 n=1 Tax=Sphaeramia orbicularis TaxID=375764 RepID=A0A673AUH6_9TELE) HSP 1 Score: 96.3 bits (238), Expect = 1.010e-16 Identity = 63/191 (32.98%), Postives = 101/191 (52.88%), Query Frame = 1
Query: 79 LQQTMLAMLGTPELHDVVLCVESIDIPCHKAVLAAWSKPFEAMFTLPMRESAHGCRVLIEDAEHKHFMAMIEYMYSGRLNLQDNNVMPVMSLANRYGVKRLMEQCEGYTKWRLNPGNVCRHLVAAELHQCESMVAYALEYLAFHFYEVHHENSSSFELLTGDLVLRVLQHEGLTVD-EETVFLAVDGWAKA 648
LQ+ M + EL DV LCV+ D PCH+A+LAA S+ F AMF ++ES H R+ I+ + ++++Y Y+ R L +NV ++ ++++ R+++ C G+ L+ + L AE H + A A +Y+ F F +V + F L D + VLQ + L V EE VF A+ W +A
Sbjct: 46 LQKGMETLRVNKELTDVTLCVQGHDFPCHRAILAAASQYFRAMFCSGLKES-HEERIEIKGLDSGTMRSLLDYTYTSRAQLTHSNVQRILEASSQFQFLRVVDACSGFLSKSLHLESCIGILNLAESHALPDLKAKAEDYITFQFSQVVQQQD--FLELPADSLETVLQRDDLDVTCEEFVFEALMRWVRA 233
BLAST of mRNA_C-tenellus_contig1003.3.12 vs. uniprot
Match: A0A433T927_ELYCH (BTB domain-containing protein n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A433T927_ELYCH) HSP 1 Score: 96.3 bits (238), Expect = 1.190e-16 Identity = 65/199 (32.66%), Postives = 105/199 (52.76%), Query Frame = 1
Query: 52 FRLDDDLTGLQQTMLAMLGTPELHDVVLCVESIDIPCHKAVLAAWSKPFEAMFTLPMRESAHGCRVLIEDAEHKHFMAMIEYMYSGRLNLQDNNVMPVMSLANRYGVKRLMEQCEGYTKWRLNPGNVCRHLVAAELHQCESMVAYALEYLAFHFYEVHHENSSSFELLTGDLVLRVLQHEGLTVD-EETVFLAVDGWAK 645
FR + + + LG +L DVVL E +P H+ +L+A S F AMFT +RE+A G + I+ + ++++Y+Y+G++ L+++NV ++S A + ++E C G+ +L+P N A+L C + A Y+ F EV H S F LL D V ++L + L V EET+F AV WA+
Sbjct: 105 FRSHNHAERTMRRLEQFLGKRQLCDVVLVAEQRRLPAHRLILSAASDYFAAMFTSDVREAAMG-EIHIKGVDSDALASLVQYVYTGQVQLREDNVENLLSAACLLQMSEVVEACCGFLMKQLHPSNCIGIRQFADLQGCTDLYKVANNYVMDRFMEVMH--SHEFVLLPCDEVCQLLASDDLNVPTEETIFEAVLRWAQ 300
BLAST of mRNA_C-tenellus_contig1003.3.12 vs. uniprot
Match: A0A3Q3XDD7_MOLML (Kelch-like family member 6 n=1 Tax=Mola mola TaxID=94237 RepID=A0A3Q3XDD7_MOLML) HSP 1 Score: 95.9 bits (237), Expect = 1.340e-16 Identity = 66/191 (34.55%), Postives = 102/191 (53.40%), Query Frame = 1
Query: 79 LQQTMLAMLGTPELHDVVLCVESIDIPCHKAVLAAWSKPFEAMFTLPMRESAHGCRVLIEDAEHKHFMAMIEYMYSGRLNLQDNNVMPVMSLANRYGVKRLMEQCEGYTKWRLNPGNVCRHLVAAELHQCESMVAYALEYLAFHFYEVHHENSSSFELLTGDLVLRVLQHEGLTVD-EETVFLAVDGWAKA 648
LQ+ M + EL DVVLCV+ D PCH+A+LAA S+ F AMF +RES H RV I+ + K ++EY Y+ + +L +NV ++ A+ + R+++ C + L+ + L AE H ++ AL+Y+A F V + F L + + VLQ + L V+ EE VF A+ W +A
Sbjct: 46 LQRGMENLRVNRELTDVVLCVQGHDFPCHRAILAAASQYFRAMFCSGLRES-HEERVEIKGFDSKTMSVLLEYTYTSQTHLTHSNVQRILEAASHFQFLRVVDACASFLSKSLHLDSCIGILSLAESHVLTALKTTALDYIASQFSLVVQQQD--FLELPAESLETVLQRDDLDVNCEEYVFEALMRWVRA 233 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1003.3.12 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig1003.3.12 >prot_C-tenellus_contig1003.3.12 ID=prot_C-tenellus_contig1003.3.12|Name=mRNA_C-tenellus_contig1003.3.12|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=718bp MLAMLGTPELHDVVLCVESIDIPCHKAVLAAWSKPFEAMFTLPMRESAHGback to top mRNA from alignment at C-tenellus_contig1003:5970..14467- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig1003.3.12 ID=mRNA_C-tenellus_contig1003.3.12|Name=mRNA_C-tenellus_contig1003.3.12|organism=Choristocarpus tenellus KU2346|type=mRNA|length=8498bp|location=Sequence derived from alignment at C-tenellus_contig1003:5970..14467- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig1003:5970..14467- >mRNA_C-tenellus_contig1003.3.12 ID=mRNA_C-tenellus_contig1003.3.12|Name=mRNA_C-tenellus_contig1003.3.12|organism=Choristocarpus tenellus KU2346|type=CDS|length=2154bp|location=Sequence derived from alignment at C-tenellus_contig1003:5970..14467- (Choristocarpus tenellus KU2346)back to top |