mRNA_C-tenellus_contig10006.2.2 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10006.2.2 vs. uniprot
Match: D8LM16_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM16_ECTSI) HSP 1 Score: 244 bits (624), Expect = 3.840e-71 Identity = 115/163 (70.55%), Postives = 133/163 (81.60%), Query Frame = 3 Query: 180 GLTPPAPKSSTAPRRWDSQEDRRLTMAVQRHGEANWKAIALHVGSRNHVQCLQRWKKVLCPGLIKGQWSADEDAVLMKLAVAGYKNWGQLAIHMPGRTSKQCRERWCHHLDPSINKSDYTPHEDRIIISSQKQLGNKWSQIASKLPGRTENAIKIRWKALQRR 668 G P K+ST PRRW ED++LT+AV+ GE +WK+IAL VGSRNHVQCLQRWKKVL PGL+KGQW A+EDA LMKLA A +KNWG L+ M GRTSKQCRERWCHHLDPSINK YT ED III +Q +LGN+WSQIA++LPGRTEN+IKIR KALQR+ Sbjct: 94 GGDPTRKKASTRPRRWQPAEDKKLTLAVKESGEKDWKSIALKVGSRNHVQCLQRWKKVLRPGLVKGQWDAEEDAALMKLATAPFKNWGVLSQSMSGRTSKQCRERWCHHLDPSINKGAYTEEEDNIIIETQAELGNRWSQIAARLPGRTENSIKIRCKALQRK 256
BLAST of mRNA_C-tenellus_contig10006.2.2 vs. uniprot
Match: A0A6H5KJU6_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJU6_9PHAE) HSP 1 Score: 245 bits (626), Expect = 1.720e-67 Identity = 116/187 (62.03%), Postives = 144/187 (77.01%), Query Frame = 3 Query: 204 SSTAPRRWDSQEDRRLTMAVQRHGEANWKAIALHVGSRNHVQCLQRWKKVLCPGLIKGQWSADEDAVLMKLAVAGYKNWGQLAIHMPGRTSKQCRERWCHHLDPSINKSDYTPHEDRIIISSQKQLGNKWSQIASKLPGRTENAIKIRWKALQRRMVDKNRDEGNMPKASTASARRRASTTRGIKAT 764 +S PRRW +ED++LT+AV+ GE +WK+IAL VGSRNHVQCLQRWKKVL PGL+KGQW A+EDA LMKLA A +KNWG L+ M GRTSKQCRERWCHHLDPSINK YT ED+III +Q +LGN+WSQIA++LPGRTEN+IKIR KALQR+++ + G ++++ A R + G T Sbjct: 109 TSARPRRWQPEEDKKLTLAVKESGEKDWKSIALKVGSRNHVQCLQRWKKVLRPGLVKGQWDAEEDAALMKLATAPFKNWGVLSQSMSGRTSKQCRERWCHHLDPSINKGAYTEEEDKIIIETQAKLGNRWSQIAARLPGRTENSIKIRCKALQRKVLSGSPSSGGRSGSTSSPAGRAPKKSTGTSTT 295
BLAST of mRNA_C-tenellus_contig10006.2.2 vs. uniprot
Match: A0A7S2UU49_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU49_9STRA) HSP 1 Score: 225 bits (574), Expect = 2.820e-63 Identity = 103/150 (68.67%), Postives = 118/150 (78.67%), Query Frame = 3 Query: 216 PRRWDSQEDRRLTMAVQRHGEANWKAIALHVGSRNHVQCLQRWKKVLCPGLIKGQWSADEDAVLMKLAVAGYKNWGQLAIHMPGRTSKQCRERWCHHLDPSINKSDYTPHEDRIIISSQKQLGNKWSQIASKLPGRTENAIKIRWKALQR 665 PR+W ED L AV+++GE+NWK IA VG+RNHVQCLQRWKKVL PGL+KGQWSA EDA L+ L G+KNWGQLA MPGRTSKQCRERW HHLDPS+ K +YT ED I+ Q +LGNKWS+IA LPGRTENA+KIRWKAL R Sbjct: 27 PRKWTLVEDEELRHAVRKYGESNWKDIAREVGTRNHVQCLQRWKKVLKPGLVKGQWSALEDAKLVDLVGKGFKNWGQLAAQMPGRTSKQCRERWSHHLDPSVKKGEYTTEEDNTILRLQSELGNKWSEIAKHLPGRTENAVKIRWKALDR 176
BLAST of mRNA_C-tenellus_contig10006.2.2 vs. uniprot
Match: H3G911_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G911_PHYRM) HSP 1 Score: 211 bits (537), Expect = 1.650e-60 Identity = 94/155 (60.65%), Postives = 116/155 (74.84%), Query Frame = 3 Query: 201 KSSTAPRRWDSQEDRRLTMAVQRHGEANWKAIALHVGSRNHVQCLQRWKKVLCPGLIKGQWSADEDAVLMKLAVAGYKNWGQLAIHMPGRTSKQCRERWCHHLDPSINKSDYTPHEDRIIISSQKQLGNKWSQIASKLPGRTENAIKIRWKALQR 665 K P+RW +ED +L AV RHGE NWK+IA V RNH QCLQRW KVL PGL+KG W DED +L +L G KNWGQ+A +PGRTSKQCRERW +HLDPSI + +Y+ EDR+I+ +Q +LGN+WS IA+ LPGRTE+A+KIRWK+L R Sbjct: 4 KDKAVPKRWTPEEDEKLREAVNRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPDEDDLLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIVRGEYSAEEDRMILDAQARLGNRWSAIAAMLPGRTEDAVKIRWKSLCR 158
BLAST of mRNA_C-tenellus_contig10006.2.2 vs. uniprot
Match: D0NJN5_PHYIT (Myb-like DNA-binding protein, putative n=2 Tax=Phytophthora TaxID=4783 RepID=D0NJN5_PHYIT) HSP 1 Score: 211 bits (537), Expect = 1.800e-59 Identity = 94/155 (60.65%), Postives = 117/155 (75.48%), Query Frame = 3 Query: 201 KSSTAPRRWDSQEDRRLTMAVQRHGEANWKAIALHVGSRNHVQCLQRWKKVLCPGLIKGQWSADEDAVLMKLAVAGYKNWGQLAIHMPGRTSKQCRERWCHHLDPSINKSDYTPHEDRIIISSQKQLGNKWSQIASKLPGRTENAIKIRWKALQR 665 K P+RW +ED +L AV RHGE NWK+IA V RNH QCLQRW KVL PGL+KG W +ED +L +L G KNWGQ+A +PGRTSKQCRERW +HLDPSI + +Y+P EDR+I+ +Q +LGN+WS IA+ LPGRTE+A+KIRWK+L R Sbjct: 77 KDKAVPKRWTPEEDDKLREAVGRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPEEDDLLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIIRGEYSPEEDRMILDAQARLGNRWSAIAAMLPGRTEDAVKIRWKSLCR 231
BLAST of mRNA_C-tenellus_contig10006.2.2 vs. uniprot
Match: A0A2P4Y3D9_9STRA (Myb-like DNA-binding protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y3D9_9STRA) HSP 1 Score: 212 bits (539), Expect = 1.110e-58 Identity = 95/155 (61.29%), Postives = 116/155 (74.84%), Query Frame = 3 Query: 201 KSSTAPRRWDSQEDRRLTMAVQRHGEANWKAIALHVGSRNHVQCLQRWKKVLCPGLIKGQWSADEDAVLMKLAVAGYKNWGQLAIHMPGRTSKQCRERWCHHLDPSINKSDYTPHEDRIIISSQKQLGNKWSQIASKLPGRTENAIKIRWKALQR 665 K P+RW +ED +L AV RHGE NWK+IA V RNH QCLQRW KVL PGL+KG W DED +L +L G KNWGQ+A +PGRTSKQCRERW +HLDPSI + +YT EDR+I+ +Q +LGN+WS IA+ LPGRTE+A+KIRWK+L R Sbjct: 86 KDKAVPKRWTQEEDDKLREAVGRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPDEDELLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIVRGEYTQEEDRMILDAQARLGNRWSAIAAMLPGRTEDAVKIRWKSLCR 240
BLAST of mRNA_C-tenellus_contig10006.2.2 vs. uniprot
Match: A0A3M6VKU0_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VKU0_9STRA) HSP 1 Score: 209 bits (531), Expect = 1.760e-58 Identity = 94/155 (60.65%), Postives = 115/155 (74.19%), Query Frame = 3 Query: 201 KSSTAPRRWDSQEDRRLTMAVQRHGEANWKAIALHVGSRNHVQCLQRWKKVLCPGLIKGQWSADEDAVLMKLAVAGYKNWGQLAIHMPGRTSKQCRERWCHHLDPSINKSDYTPHEDRIIISSQKQLGNKWSQIASKLPGRTENAIKIRWKALQR 665 K P+RW ED +L AV RHGE NWK+IA V RNH QCLQRW KVL PGL+KG W DED +L +L G KNWGQ+A +PGRTSKQCRERW +HLDPSI + +Y+ EDR+I+ +Q +LGN+WS IA+ LPGRTE+A+KIRWK+L R Sbjct: 94 KDKAVPKRWTPTEDEKLRDAVGRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPDEDELLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIIRGEYSQAEDRMILDAQSRLGNRWSAIAAMLPGRTEDAVKIRWKSLCR 248
BLAST of mRNA_C-tenellus_contig10006.2.2 vs. uniprot
Match: A0A418B0H6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418B0H6_9STRA) HSP 1 Score: 216 bits (549), Expect = 8.030e-58 Identity = 97/150 (64.67%), Postives = 115/150 (76.67%), Query Frame = 3 Query: 216 PRRWDSQEDRRLTMAVQRHGEANWKAIALHVGSRNHVQCLQRWKKVLCPGLIKGQWSADEDAVLMKLAVAGYKNWGQLAIHMPGRTSKQCRERWCHHLDPSINKSDYTPHEDRIIISSQKQLGNKWSQIASKLPGRTENAIKIRWKALQR 665 PRRW ED L +AV+R GE NWKAIA V RNH QCLQRW KVL PGLIKG W+ +EDA L L G KNWGQ+A H+PGRTSKQCRERWC+HLDP+INK +YT ED++I+ Q +LGN+WS IA +L GRTE+A+KIRWK+L R Sbjct: 108 PRRWSKAEDESLRLAVERSGERNWKAIADQVAGRNHTQCLQRWTKVLKPGLIKGHWTPEEDAKLRTLVAEGRKNWGQVASHIPGRTSKQCRERWCNHLDPNINKGNYTREEDQLIVDMQAKLGNRWSVIAQQLSGRTEDAVKIRWKSLMR 257
BLAST of mRNA_C-tenellus_contig10006.2.2 vs. uniprot
Match: A0A662WMC1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WMC1_9STRA) HSP 1 Score: 205 bits (522), Expect = 1.080e-57 Identity = 91/147 (61.90%), Postives = 111/147 (75.51%), Query Frame = 3 Query: 216 PRRWDSQEDRRLTMAVQRHGEANWKAIALHVGSRNHVQCLQRWKKVLCPGLIKGQWSADEDAVLMKLAVAGYKNWGQLAIHMPGRTSKQCRERWCHHLDPSINKSDYTPHEDRIIISSQKQLGNKWSQIASKLPGRTENAIKIRWKA 656 PRRW + ED L AV+ H E NWKAIA HV RNH QCLQRW KVL PGL+KG WS ED +L +L A KNWG +A +PGRTSKQCRERW +HLDP+I + Y+P EDR+I+ +Q +LGN+WS IA+ LPGRTE+A+KIRWK+ Sbjct: 5 PRRWTAAEDEALRSAVESHREKNWKAIAAHVAGRNHTQCLQRWTKVLAPGLVKGHWSPHEDELLRRLVAADQKNWGDVAAKIPGRTSKQCRERWHNHLDPAIVRGAYSPEEDRLILEAQARLGNRWSVIAAMLPGRTEDAVKIRWKS 151
BLAST of mRNA_C-tenellus_contig10006.2.2 vs. uniprot
Match: A0A6G0XBC5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XBC5_9STRA) HSP 1 Score: 216 bits (551), Expect = 1.940e-57 Identity = 103/163 (63.19%), Postives = 120/163 (73.62%), Query Frame = 3 Query: 216 PRRWDSQEDRRLTMAVQRHGEANWKAIALHVGSRNHVQCLQRWKKVLCPGLIKGQWSADEDAVLMKLAVAGYKNWGQLAIHMPGRTSKQCRERWCHHLDPSINKSDYTPHEDRIIISSQKQLGNKWSQIASKLPGRTENAIKIRWKALQR--RMVDKNRDEGN 698 PRRW ED L +AV+R GE NWKAIA V RNH QCLQRW KVL PGLIKG W+ +EDA L L G KNWGQ+A H+PGRTSKQCRERWC+HLDP+INK +YT ED++II Q +LGN+WS IA +L GRTE+A+KIRWK+L R R DK E N Sbjct: 97 PRRWSKAEDESLRLAVERSGERNWKAIADQVVGRNHTQCLQRWTKVLKPGLIKGHWTPEEDAKLRALVAEGRKNWGQVASHIPGRTSKQCRERWCNHLDPNINKGNYTREEDQLIIDMQAKLGNRWSVIAQQLTGRTEDAVKIRWKSLMRTKRTRDKEDAESN 259 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10006.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10006.2.2 >prot_C-tenellus_contig10006.2.2 ID=prot_C-tenellus_contig10006.2.2|Name=mRNA_C-tenellus_contig10006.2.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=503bp MQPSVKTKRKGGEVEEERSKRHNSEDLEPRFRTTSDESTYTTDENFSDDEback to top mRNA from alignment at C-tenellus_contig10006:9..3552- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10006.2.2 ID=mRNA_C-tenellus_contig10006.2.2|Name=mRNA_C-tenellus_contig10006.2.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3544bp|location=Sequence derived from alignment at C-tenellus_contig10006:9..3552- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10006:9..3552- >mRNA_C-tenellus_contig10006.2.2 ID=mRNA_C-tenellus_contig10006.2.2|Name=mRNA_C-tenellus_contig10006.2.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=1509bp|location=Sequence derived from alignment at C-tenellus_contig10006:9..3552- (Choristocarpus tenellus KU2346)back to top |