mRNA_C-tenellus_contig100.5.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig100.5.1 vs. uniprot
Match: D7FVA6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVA6_ECTSI) HSP 1 Score: 168 bits (426), Expect = 6.100e-51 Identity = 79/118 (66.95%), Postives = 101/118 (85.59%), Query Frame = 1 Query: 1 NTWVNLALDLDKSAKLRFSPLQGDTGRALLAFSGRSPDDLSSIVLVQDNGSSYVQSDAVLRIGKLIGGVVGVLVQPGVLVPKFVRDHLYDTVANNRYSIMGKLRECRCSDEQYADRFV 354 N +VNL LD+D K RFS LQ TGRALLA SGRSPDD+SSIVLV+ +G++++QSDA+LR+G+L+GG VG+++ PGVLVPKFVR+ +YDTVA+NRYS+MGK CRCSDE+YADRF+ Sbjct: 76 NGFVNLFLDVDTDEKFRFSALQSQTGRALLALSGRSPDDISSIVLVEQSGAAHIQSDALLRMGRLLGGPVGLVLLPGVLVPKFVRNKMYDTVADNRYSVMGKRDVCRCSDERYADRFI 193
BLAST of mRNA_C-tenellus_contig100.5.1 vs. uniprot
Match: A0A836CH16_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH16_9STRA) HSP 1 Score: 153 bits (387), Expect = 1.210e-45 Identity = 76/119 (63.87%), Postives = 91/119 (76.47%), Query Frame = 1 Query: 1 NTWVNLALDLDKSAK-LRFSPLQGDTGRALLAFSGRSPDDLSSIVLVQDNGSSYVQSDAVLRIGKLIGGVVGVLVQPGVLVPKFVRDHLYDTVANNRYSIMGKLRECRCSDEQYADRFV 354 NTWVN AL LD K LRF+PLQGD G+ALL +GR+ DD+SSIVLV + GS Y++SDA+LRI K +GG VL PG L+P+F RD LYD VANNRYS+MGK CRCSD +YADRF+ Sbjct: 29 NTWVNAALQLDPDGKALRFTPLQGDVGKALLQQAGRAADDISSIVLVDEQGS-YIKSDAILRISKALGGPAPVLAAPGFLMPQFARDTLYDLVANNRYSLMGKRETCRCSDPKYADRFI 146
BLAST of mRNA_C-tenellus_contig100.5.1 vs. uniprot
Match: D8SQD1_SELML (Uncharacterized protein n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SQD1_SELML) HSP 1 Score: 112 bits (280), Expect = 2.590e-29 Identity = 60/118 (50.85%), Postives = 77/118 (65.25%), Query Frame = 1 Query: 1 NTWVNLALDLDKSAKLRFSPLQGDTGRALLAFSGRSPDDLSSIVLVQDNGSSYVQSDAVLRIGKLIGGVVGVLVQPGVLVPKFVRDHLYDTVANNRYSIMGKLRECRCSDEQYADRFV 354 N VN LD D A+LRF+ LQ + GRALL SGRS DD+SSIVLV+ SY++S+AVLRI + L +L P F+RD YD +ANNRYS+ G+ CR SDEQ+ +RF+ Sbjct: 36 NGGVNFVLDRDPRARLRFAALQSNAGRALLEKSGRSRDDISSIVLVEKQ-RSYIKSEAVLRIAHYLDEPYPSLATLALLFPLFLRDPTYDLIANNRYSLFGQTNHCRTSDEQFKERFL 152
BLAST of mRNA_C-tenellus_contig100.5.1 vs. uniprot
Match: A0A383WGK0_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WGK0_TETOB) HSP 1 Score: 113 bits (283), Expect = 6.200e-29 Identity = 61/118 (51.69%), Postives = 78/118 (66.10%), Query Frame = 1 Query: 1 NTWVNLALDLDKSAKLRFSPLQGDTGRALLAFSGRSPDDLSSIVLVQDNGSSYVQSDAVLRIGKLIGGVVGVLVQPGVLVPKFVRDHLYDTVANNRYSIMGKLRECRCSDEQYADRFV 354 N VN LD DK RF+ LQ GR LL GR+PDD+SSIVLV+++ Y++S+AVLRI +G + +L +LVPKFV D +YD VANNRYS GK CR SD+ +ADRF+ Sbjct: 108 NGGVNFMLDWDKEGVYRFAALQSTPGRQLLTRCGRAPDDISSIVLVEES-RCYIKSEAVLRIALRLGMPLPLLAGLALLVPKFVGDPVYDQVANNRYSFFGKSDSCRVSDDGFADRFL 224
BLAST of mRNA_C-tenellus_contig100.5.1 vs. uniprot
Match: A0A7S2E5B0_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2E5B0_9STRA) HSP 1 Score: 113 bits (282), Expect = 6.850e-29 Identity = 63/124 (50.81%), Postives = 85/124 (68.55%), Query Frame = 1 Query: 1 NTWVNLALDLDKSAKLRFSPLQGDTGRALLAFSGRSPDDLSSIVLVQDNGSSYVQSDAVLRIGKLIGGVVGVLVQPG-----VLVPKFVRDHLYDTVANNRYSIMGKLRECRCS-DEQYADRFV 354 N VN+ALD D S KLRF+ LQ + GRALL +GR DD+SSIVLV D G+ Y++SDA+L+I + + + + ++P VLVPKF+RD +YD VA+NRY +MGK ECR D ++RFV Sbjct: 86 NNAVNIALDWDPSGKLRFAALQSNVGRALLQANGRQADDISSIVLVTDEGA-YIKSDAILKITEALTPLSMLPLKPAAVLGRVLVPKFIRDVIYDGVADNRYDLMGKREECRYDVDGSLSERFV 208
BLAST of mRNA_C-tenellus_contig100.5.1 vs. uniprot
Match: A0A7S0XHX8_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0XHX8_9CHLO) HSP 1 Score: 112 bits (280), Expect = 1.270e-28 Identity = 62/122 (50.82%), Postives = 81/122 (66.39%), Query Frame = 1 Query: 1 NTWVNLALDLDKSAKLRFSPLQGDTGRALLAFSGRSPDDLSSIVLVQDNGSSYVQSDAVLRIGKLIGG----VVGVLVQPGVLVPKFVRDHLYDTVANNRYSIMGKLRECRCSDEQYADRFV 354 N VNLALDLD KLRF+ LQ D GR LL +GR P D+SSIVLV++N ++Y +SDAVLRI + G L G LVP+F+RD +YD VA+NRY ++G CR D+++ +RFV Sbjct: 95 NGGVNLALDLDPPGKLRFAALQSDAGRQLLVRAGRDPTDISSIVLVEEN-NAYTKSDAVLRIATYLENPLLPAAGAL---GPLVPQFLRDAVYDAVADNRYELLGIQDSCRLGDDRFDERFV 212
BLAST of mRNA_C-tenellus_contig100.5.1 vs. uniprot
Match: A0A250X8I3_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250X8I3_9CHLO) HSP 1 Score: 112 bits (280), Expect = 1.580e-28 Identity = 56/118 (47.46%), Postives = 77/118 (65.25%), Query Frame = 1 Query: 1 NTWVNLALDLDKSAKLRFSPLQGDTGRALLAFSGRSPDDLSSIVLVQDNGSSYVQSDAVLRIGKLIGGVVGVLVQPGVLVPKFVRDHLYDTVANNRYSIMGKLRECRCSDEQYADRFV 354 N VNL LDLD + R + LQ GR LL GR PDD+SSIV+V+ G +++SDA+LRI + + + GV VP F+RD LYD VA+NRYSI+GK CR D+++++RF+ Sbjct: 103 NGAVNLMLDLDPRGEFRMAALQSPAGRRLLQTCGRQPDDISSIVVVERGGKHHIKSDAILRIAQGLSNPFPLFALFGVPVPPFLRDSLYDLVADNRYSILGKRDVCRLKDDRFSERFI 220
BLAST of mRNA_C-tenellus_contig100.5.1 vs. uniprot
Match: A0A2K1L8C5_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L8C5_PHYPA) HSP 1 Score: 110 bits (276), Expect = 1.210e-27 Identity = 56/118 (47.46%), Postives = 79/118 (66.95%), Query Frame = 1 Query: 1 NTWVNLALDLDKSAKLRFSPLQGDTGRALLAFSGRSPDDLSSIVLVQDNGSSYVQSDAVLRIGKLIGGVVGVLVQPGVLVPKFVRDHLYDTVANNRYSIMGKLRECRCSDEQYADRFV 354 N VN LD D ++R + LQ + GRALL +GR DDLSS+VL++ + SY++S+ VLR + +G ++ + G+L P F RD +YD VANNRYSI+GK +CR SD ++ DRFV Sbjct: 133 NAGVNFVLDNDPEGRVRMAALQSEAGRALLLRAGRLSDDLSSLVLIEKD-RSYIKSEGVLRTAQYLGNLLPPVGSLGLLFPLFFRDFVYDNVANNRYSILGKRDQCRVSDPRFNDRFV 249
BLAST of mRNA_C-tenellus_contig100.5.1 vs. uniprot
Match: A0A7S2B0P4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B0P4_9STRA) HSP 1 Score: 109 bits (273), Expect = 1.610e-27 Identity = 55/118 (46.61%), Postives = 75/118 (63.56%), Query Frame = 1 Query: 1 NTWVNLALDLDKSAKLRFSPLQGDTGRALLAFSGRSPDDLSSIVLVQDNGSSYVQSDAVLRIGKLIGGVVGVLVQPGVLVPKFVRDHLYDTVANNRYSIMGKLRECRCSDEQYADRFV 354 N VN ALD D RF+ LQ TGRALL +GR PDD+SSIVLV D+ ++Y++SDA+LRI + + L G+ PK RD YD +A NRY + G+ + CR SD+++ RF+ Sbjct: 97 NGGVNFALDWDPDGNFRFAALQSPTGRALLRRAGREPDDISSIVLVDDS-AAYIKSDAILRIARKLNLPFPFLGSAGLFFPKLPRDVFYDVIAQNRYRVFGRSQSCRLSDDRFEARFI 213
BLAST of mRNA_C-tenellus_contig100.5.1 vs. uniprot
Match: A0A7J7QEF6_9CHLO (Uncharacterized protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QEF6_9CHLO) HSP 1 Score: 108 bits (271), Expect = 3.460e-27 Identity = 58/118 (49.15%), Postives = 76/118 (64.41%), Query Frame = 1 Query: 1 NTWVNLALDLDKSAKLRFSPLQGDTGRALLAFSGRSPDDLSSIVLVQDNGSSYVQSDAVLRIGKLIGGVVGVLVQPGVLVPKFVRDHLYDTVANNRYSIMGKLRECRCSDEQYADRFV 354 N VN LD DK RF+ LQ G+ LL GR+PDD+SSIVLV+ + ++S+AVLRI +G + +L +LVPKF+ D +YD VANNRYS+ GK CR SD +ADRF+ Sbjct: 103 NGGVNFMLDWDKEGVYRFAALQSTPGQQLLTRCGRAPDDISSIVLVEQD-RCCIKSEAVLRIATRLGMPLPLLAGLALLVPKFISDPVYDQVANNRYSVFGKSNSCRVSDAGFADRFL 219 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig100.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig100.5.1 >prot_C-tenellus_contig100.5.1 ID=prot_C-tenellus_contig100.5.1|Name=mRNA_C-tenellus_contig100.5.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=119bp NTWVNLALDLDKSAKLRFSPLQGDTGRALLAFSGRSPDDLSSIVLVQDNGback to top mRNA from alignment at C-tenellus_contig100:4193..4964- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig100.5.1 ID=mRNA_C-tenellus_contig100.5.1|Name=mRNA_C-tenellus_contig100.5.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=772bp|location=Sequence derived from alignment at C-tenellus_contig100:4193..4964- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig100:4193..4964- >mRNA_C-tenellus_contig100.5.1 ID=mRNA_C-tenellus_contig100.5.1|Name=mRNA_C-tenellus_contig100.5.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=357bp|location=Sequence derived from alignment at C-tenellus_contig100:4193..4964- (Choristocarpus tenellus KU2346)back to top |