mRNA_C-tenellus_contig1.17.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig1.17.1 vs. uniprot
Match: D8LK59_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK59_ECTSI) HSP 1 Score: 297 bits (760), Expect = 2.170e-97 Identity = 150/285 (52.63%), Postives = 192/285 (67.37%), Query Frame = 1 Query: 1 SWHIRGNHLPILSEAERDEEGAWLTKRAGGGNQESSLGNVVVKDTQMQMPEILFGNSTLQLHDEESSLVLHFDARGALTRWVELFLTGKYEASKRRLSLPFTSRLHGGGDNIKLQEYDWTWATDYAGS-----VGVMSGNTLEVVSAL*TKG----SAVAWVSCPPGGIDRVLLEDQSIPILFYDEVVLYEDFIHDHGVVRLSVKIRVMPQCWYVLLRYWLRVDGVVMKVVDTRIFHKFGQPHVYRERTKNSITFEELRDQGISTAATSFAEAHNAIPFLRPTEG 828 +W +R NH PIL E E D AWL A G Q + G+VVVK T MQ+PEILFGN+ L+ +ES +L F++R AL +WVELF G +E K R + + +R G I+ QEYDWTW TDYAGS VGV + +++ L G + V WV+C PGGI+R +L DQS PIL YD+VVL+EDFIHDHGVVRLSVK RVMP W+VLLRYWLRVDGVVMKV DTR FHKFG+ V+RERT++S++F L +G+ST +++ A +A+P L + G Sbjct: 12 AWTVRSNHRPILGEEEHDALVAWLGDEASSGPQVLACGSVVVKGTPMQLPEILFGNNALEFRHQESGFILQFESRAALKKWVELFAEGAFEVIKVREAQKWQTRT---GTPIRKQEYDWTWGTDYAGSCRRQDVGVEYSESGDILQPLTRTGKDTETPVEWVACEPGGINRQMLLDQSSPILMYDDVVLFEDFIHDHGVVRLSVKTRVMPGFWFVLLRYWLRVDGVVMKVFDTRCFHKFGELSVFRERTQHSVSFTSLEQRGLSTDPSAYPNAESALPVLDLSSG 293
BLAST of mRNA_C-tenellus_contig1.17.1 vs. uniprot
Match: A0A836CMW7_9STRA (TIP41-like family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMW7_9STRA) HSP 1 Score: 172 bits (437), Expect = 7.110e-48 Identity = 97/271 (35.79%), Postives = 136/271 (50.18%), Query Frame = 1 Query: 4 WHIRGNHLPILSEAERDEEGAWLTKRAGGGNQESSLGNVVVKDTQMQMPEILFGNSTLQLHDEESSLVLHFDARGALTRWVELFLTGKYEASKRRLSLPFTSRLHGGGDNIKLQEYDWTWATDYAGSVGVMSGNTLEVVSAL*TKGSAVAWVSCPPGGIDRVLLEDQSIPILFYDEVVLYEDFIHDHGVVRLSVKIRVMPQCWYVLLRYWLRVDGVVMKVVDTRIFHKFGQPHVYRERTKNSITFEELRDQGISTAATSFAEAHNAIPFLR 816 W + P+ +E + + LT + +Q ++VV+ MQ+PE+LFG + LQL S LVLHF A AL WV + + G E + G +++ SA + + + W C GID +L+D + PILF+DEV L+EDFIHD G VRLS K+RVMP+CWYVLLRYWLRVDG+ +K+ D R FHKFG V+RE + + FE++ + S A A P L+ Sbjct: 38 WRVLTRCCPMSNEHDLCQLVQELTPPSDESSQPHE--SIVVRGNHMQLPEMLFGGNALQLQHPASGLVLHFCAARALRDWVNMHIDGPVEQQ-----------------DXXXXXXXXXXXXXXXXXXXXXXGGLIDISSA--AQHTTLDWQRCDASGIDVAMLQDSAAPILFFDEVTLFEDFIHDAGEVRLSAKVRVMPRCWYVLLRYWLRVDGITLKIADARYFHKFGAADVHREVSVLQLPFEDVERRLPSATQACHLTADQAYPILK 287
BLAST of mRNA_C-tenellus_contig1.17.1 vs. uniprot
Match: A0A7S2H1X7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H1X7_9STRA) HSP 1 Score: 162 bits (409), Expect = 2.500e-44 Identity = 98/288 (34.03%), Postives = 142/288 (49.31%), Query Frame = 1 Query: 4 WHIRGNHLPILSEAERDEEGAWLTKRAGGGNQESSLGNVVVKDTQMQMPEILFGNSTLQLHDEESSLVLHFDARGALTRWVELFLTGK------YEASKRRLSLPFTSRLHGGGDNIKLQEYDWTWATDYAGSVGVMSGNTLEVVSAL*TKGSA-VAWVSCP------PGGIDRVLLEDQSIPILFYDEVVLYEDFIHDHGVVRLSVKIRVMPQCWYVLLRYWLRVDGVVMKVVDTRIFHKFGQPHVYRERTKNSITFEELRDQGISTAATSFAEAHNAI---PFLRP 819 WHI + PI SE ER L AG Q+ +PE+++ S L L + S + F A AL W TG + K S + + G D + YDWT+ TD++G L S L + +A AWV GGIDR LL D ++PILF+D+V+L+ED +HD G +R+S +IRVMP W+V++R W+R+DGV ++ V+TR+FHKFG HV RER + +E L G++ + ++ + P L P Sbjct: 25 WHITSSRGPIASEDERHSIRERLNSLAG---------------FQVTLPEMVYNASNLVLRHDASQTTVEFSALPALEAWASAQRTGSGCGGHFKDVLKVSGSEKWLAGRQAGPDQTLAKSYDWTFMTDWSGD--------LTHTSTLAGENTAPAAWVDADGAEGEETGGIDRALLLDHTLPILFFDDVLLFEDELHDQGDMRISARIRVMPAAWFVVVRCWVRLDGVGLRAVETRLFHKFGDAHVSRERYAREVVWENLESVGLNGEPATLSDPDLVVAKLPLLEP 289
BLAST of mRNA_C-tenellus_contig1.17.1 vs. uniprot
Match: W7TH58_9STRA (TIP41-like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TH58_9STRA) HSP 1 Score: 159 bits (403), Expect = 1.100e-42 Identity = 91/263 (34.60%), Postives = 135/263 (51.33%), Query Frame = 1 Query: 145 MPEILFGNSTLQLH--------DEE-----------------SSLVLHFDARGALTRWVELFLTGKYEASKRRLSLPFTSRLHGG--GDNIKLQEYDWTWATDYAGSV--GVMSG-----------NTLEVVSAL*TKGSAVAWVSCPPGGIDRVLLEDQSIPILFYDEVVLYEDFIHDHGVVRLSVKIRVMPQCWYVLLRYWLRVDGVVMKVVDTRIFHKFGQPHVYRERTKNSITFEELRDQGISTAATSFAEAHNAIPFL 813 +PEILFG S L+L +EE + L F+ GAL W E + + + +P SR G G ++ YDW + TDY G + V G +TL V + + + W IDR LL+ + PILFYD+V LYED +HDHGVV L+VK+RVMP CW+VLLRY+LRVDGV++++ DTR FH+ G + +E + +TF +L ++G+ST + + + + + + Sbjct: 123 LPEILFGKSFLELRHSVIPGRSEEEVLGDSKEEMRSGALPATTDFWLRFNTTGALISWAERHVDTNEKGKVEVIRVPEASRWAAGHLGAGLRQVRYDWVFGTDYEGELLRRVRGGGQRDKVEADPCDTLLDVEERKERSAGLEWEVADASVIDRSLLQCRDQPILFYDDVTLYEDELHDHGVVSLNVKVRVMPTCWFVLLRYFLRVDGVLLRIRDTRYFHRMGHEWIGKESRRKEVTFAQLAEEGLSTRTSEYRDVNAVVGMI 385
BLAST of mRNA_C-tenellus_contig1.17.1 vs. uniprot
Match: A0A4D9D382_9STRA (PPM-type phosphatase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D382_9STRA) HSP 1 Score: 162 bits (409), Expect = 1.130e-41 Identity = 99/293 (33.79%), Postives = 147/293 (50.17%), Query Frame = 1 Query: 55 EEGAWLTKRAGGGNQESSLGNVVVKDTQMQMPEILFGNSTLQLH--------DEE-----------------SSLVLHFDARGALTRWVELFLTGKYEASKRRLSLPFTSRLHGG--GDNIKLQEYDWTWATDYAGSV--GVMSGN-----------TLEVVSAL*TKGSAVAWVSCPPGGIDRVLLEDQSIPILFYDEVVLYEDFIHDHGVVRLSVKIRVMPQCWYVLLRYWLRVDGVVMKVVDTRIFHKFGQPHVYRERTKNSITFEELRDQGISTAATSFAEAHNAIPFL 813 EEGA+ + G+ + L N + +PEILFG S L+L +EE + L F+ GAL W E + + + +P SR G G ++ YDW + TDY G + V GN TL V + + + W IDR LL+ + PILFYD+V LYED +HDHGVV L+VK+RVMP CW+VLLRY+LRVDGV++++ DTR FH+ G + +E + +TF +L ++G+ST + + + + + + Sbjct: 32 EEGAFAS-----GDHPAGLSNA--GHNFIPLPEILFGKSFLELRHSAIPGRSEEEVLWDSKEEVRSGALPATTDFWLRFNTTGALISWAERHVDTNEKGKVEVIRVPEASRWAAGHLGAGLRQVRYDWVFGTDYEGELLKRVSGGNQRDKVEADPCDTLLDVEERKERSAGLEWEVADASVIDRSLLQCRDQPILFYDDVTLYEDELHDHGVVSLNVKVRVMPTCWFVLLRYFLRVDGVLLRIRDTRYFHRMGHEWIGKESRRKEVTFAQLAEEGLSTRTSEYRDVNAVVGMI 317
BLAST of mRNA_C-tenellus_contig1.17.1 vs. uniprot
Match: A0A0C9RYV1_9SPER (TSA: Wollemia nobilis Ref_Wollemi_Transcript_2233_1410 transcribed RNA sequence n=1 Tax=Wollemia nobilis TaxID=56998 RepID=A0A0C9RYV1_9SPER) HSP 1 Score: 147 bits (371), Expect = 4.850e-39 Identity = 100/275 (36.36%), Postives = 145/275 (52.73%), Query Frame = 1 Query: 4 WHIRGNHLPILSEAERDEEGAWLTKRAGGGNQESSLGNVVVKDTQMQMPEILFGNSTLQLHDEESSLVLHFDARGALTRW-------VELFLTGKYEASKRRLSLPFTSRLHGGGDNIKLQEYDWTWATDYAGS-VGVMSGNTLEVVSAL*TKGSAVAWVSCPPGGIDRVLLEDQSIPILFYDEVVLYEDFIHDHGVVRLSVKIRVMPQCWYVLLRYWLRVDGVVMKVVDTRIFHKFGQ-----PHVYRERTKNSITFEELRDQGISTAATSFAE 789 W I PIL RDE W K DT +PE++FG S+L+L EE+ + ++F+A AL W VE+ K++ F S+ + +YD+T+ T Y GS V SGN +E+ + WV+C I+ V ++ + PILFYDEVVLYED + D+GV L+VK+RVMP CW++LLR+WLRVDGV+M+V DTRI+ F P V RE T+ TF+ L +G S+ ++++ + Sbjct: 38 WRIESKKRPILKSHARDE---WEKKL----------------DT-AHLPEMVFGESSLELVHEETGIKIYFNAFDALLGWKQEPLPPVEVPAAAKWK---------FRSK----PSQQVILDYDYTFTTPYCGSEVLGPSGNQVEMELTTKATNQTLKWVACEDH-INMVAVQSKD-PILFYDEVVLYEDELADNGVSLLTVKVRVMPTCWFLLLRFWLRVDGVLMRVRDTRIYCAFESDVKRMPVVIRECTRREDTFKALAARGFSSDSSAYGD 277
BLAST of mRNA_C-tenellus_contig1.17.1 vs. uniprot
Match: A0A7S2SEG8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SEG8_9STRA) HSP 1 Score: 150 bits (380), Expect = 5.110e-38 Identity = 79/226 (34.96%), Postives = 124/226 (54.87%), Query Frame = 1 Query: 139 MQMPEILFGNSTLQLHDEESSLVLHFDARGALTRWVELFLTGKYEASKRRLSLPFTSRLHGGGDNIKL-QEYDWTWATDYAGSVGVMSGNTLEVVSAL*TKGSAVAWVSCPPGGIDRVLLEDQSIPILFYDEVVLYEDFIHDHGVVRLSVKIRVMPQCWYVLLRYWLRVDGVVMKVVDTRIFHKFGQPHVYRERTKNSITFEELRDQGISTAATSFAEAHNAIPFL 813 +Q+PE+ + +S + + LHF A AL W E +G + +++ T + ++ EYDWT+ TD+ G V G+ AW C GI R ++ D+S PIL +D++VLYED +HD G + +SVK RVMPQCW++LLR + RVD VV++V +TR+FH+ G +V+RE ++++E+L QG S + E + +P L Sbjct: 11 VQLPEMPYESSLNVSFEGPGGIRLHFGAEAALRAWAEAQRSGAARDAVTKVAA--TRQWQSRAVEVEAADEYDWTFFTDWPGDV----------------LGAPAAWEECASSGIQREMVADRSAPILLFDDLVLYEDELHDFGDMSVSVKFRVMPQCWFLLLRCFCRVDNVVIRVHETRMFHRVGDEYVHREDQHRTVSWEDLASQGRSVDPKDYKEVNRVVPTL 218
BLAST of mRNA_C-tenellus_contig1.17.1 vs. uniprot
Match: B8LRL8_PICSI (Uncharacterized protein n=2 Tax=Pinaceae TaxID=3318 RepID=B8LRL8_PICSI) HSP 1 Score: 140 bits (352), Expect = 5.420e-36 Identity = 99/272 (36.40%), Postives = 143/272 (52.57%), Query Frame = 1 Query: 4 WHIRGNHLPILSEAERDEEGAWLTKRAGGGNQESSLGNVVVKDTQMQMPEILFGNSTLQLHDEESSLVLHFDARGALTRWVELFLTGKYEASKRRLSLPFTSR--LHGGGDNIKLQEYDWTWATDYAGSVGVMSGNTLEV---VSAL*TKGSAVAWVSCPPGGIDRVLLEDQSIPILFYDEVVLYEDFIHDHGVVRLSVKIRVMPQCWYVLLRYWLRVDGVVMKVVDTRIFHKF-----GQPHVYRERTKNSITFEELRDQGISTAATSFAE 789 W I PIL+ R E W E LG+ +PE++FG S+L+L EE+ + +HF+A AL W K EA + +P ++ + +YD+T+ T Y+GS V+ N +V V A T + W+ I+ V L+ + PILFYDEVVLYED + D+GV L+VK+RVMP CW++LLR+WLRVDGV+M+V DTR++ F G P V RER TFE L +G + + ++ + Sbjct: 60 WRIETMKRPILNSDARQE---W----------EKKLGSA-------HLPEMVFGESSLELVHEETGIKIHFNAFDALQGW-------KQEALPP-VEVPAAAKWKFRSKPSQQVILDYDYTFTTPYSGSE-VLEPNRKQVEMDVQASETS-ECLCWIQSEDR-INLVALQSKD-PILFYDEVVLYEDELADNGVSLLTVKVRVMPTCWFLLLRFWLRVDGVLMRVRDTRMYCAFESDSKGMPVVIRERCGREGTFEALAVRGFPSESCAYGD 299
BLAST of mRNA_C-tenellus_contig1.17.1 vs. uniprot
Match: A0A2R6WRF9_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WRF9_MARPO) HSP 1 Score: 139 bits (350), Expect = 1.040e-35 Identity = 88/239 (36.82%), Postives = 132/239 (55.23%), Query Frame = 1 Query: 145 MPEILFGNSTLQLHDEESSLVLHFDARGALTRW-------VELFLTGKYE-ASKRRLSLPFTSRLHGGGDNIKLQEYDWTWATDYAGS-----------VGVMSGNTLEVVSAL*TKGSAVAWVSCPPGGIDRVLLEDQSIPILFYDEVVLYEDFIHDHGVVRLSVKIRVMPQCWYVLLRYWLRVDGVVMKVVDTRIFHKFGQ-----PHVYRERTKNSITFEELRDQGISTAATSFAE 789 +PE++FG+S+L+L E + + +HF+A L W VE+ K++ ASK + + +YD+T+ T Y GS + V G+ E +A A+ WV C ID V L+ + PILF+DEV+L+ED + D+G+ L+VK+RVMP+CW++LLRYWLRVDGV+M++ DTR+F KF P V RER TF+ L +G A ++A+ Sbjct: 77 LPEMVFGDSSLELKHEATGIKIHFNALDGLRGWKKEGLPPVEVPAAAKWKFASKPSQQV--------------ILDYDYTFTTPYCGSENLEPCGQTSALSVRDGSAAER-NAEADSHPALEWVECEEQ-IDLVSLQQRD-PILFFDEVILFEDELADNGISLLTVKVRVMPKCWFLLLRYWLRVDGVLMRLRDTRVFSKFSSDPKEVPVVLRERCVKEDTFQSLASRGYPKDAGAYAD 298
BLAST of mRNA_C-tenellus_contig1.17.1 vs. uniprot
Match: A0A6I9QC77_ELAGV (TIP41-like protein isoform X1 n=10 Tax=Arecaceae TaxID=4710 RepID=A0A6I9QC77_ELAGV) HSP 1 Score: 137 bits (345), Expect = 3.600e-35 Identity = 94/274 (34.31%), Postives = 135/274 (49.27%), Query Frame = 1 Query: 4 WHIRGNHLPILSEAERDEEGAWLTKRAGGGNQESSLGNVVVKDTQMQMPEILFGNSTLQLHDEESSLVLHFDARGALTRW-------VELFLTGKYEASKRRLSLPFTSRLHGGGDNIKLQEYDWTWATDYAGSVGVMSGNTLEVVSAL*TKGSAVAWVSCPPGGIDRVLLEDQSIPILFYDEVVLYEDFIHDHGVVRLSVKIRVMPQCWYVLLRYWLRVDGVVMKVVDTRIFHKFGQPH-----VYRERTKNSITFEELRDQGISTAATSFAE 789 WHI + PIL+ E W E LG +PE++FG S+L L E+S L LHF+A AL W VE+ K++ + PF + +YD+T+ T Y GS + N + +S ++ W C ID L + PILFYDEVVLYED + D+GV L+VK+RVMP CW++LLR+WLRVDGV+M++ DTR++ F H + RE T + L +G + + S+ + Sbjct: 32 WHIESSRQPILNSLALQE---W----------EEKLGT-------SHLPEMVFGESSLYLLHEDSGLKLHFNAFDALKGWKQEPLPPVEVPAAAKWKFRSK----PFQQ---------VILDYDYTFTTPYCGSEAI-EPNPEKAISE--DGCCSLCWEDCDER-IDLAALSSKE-PILFYDEVVLYEDELADNGVSLLTVKVRVMPSCWFLLLRFWLRVDGVLMRLRDTRVYCAFVSDHKAIPVILRESCWREATIQSLSAKGFPSDSASYGD 267 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1.17.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig1.17.1 >prot_C-tenellus_contig1.17.1 ID=prot_C-tenellus_contig1.17.1|Name=mRNA_C-tenellus_contig1.17.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=98bp MQMPEILFGNSTLQLHDEESSLVLHFDARGALTRWVELFLTGKYEASKRRback to top mRNA from alignment at C-tenellus_contig1:37376..41118+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig1.17.1 ID=mRNA_C-tenellus_contig1.17.1|Name=mRNA_C-tenellus_contig1.17.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3743bp|location=Sequence derived from alignment at C-tenellus_contig1:37376..41118+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig1:37376..41118+ >mRNA_C-tenellus_contig1.17.1 ID=mRNA_C-tenellus_contig1.17.1|Name=mRNA_C-tenellus_contig1.17.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=294bp|location=Sequence derived from alignment at C-tenellus_contig1:37376..41118+ (Choristocarpus tenellus KU2346)back to top |