prot_C-linearis_contig10.449.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig10.449.1
Unique Nameprot_C-linearis_contig10.449.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length318
Homology
BLAST of mRNA_C-linearis_contig10.449.1 vs. uniprot
Match: A0A6H5KPZ6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPZ6_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 5.290e-21
Identity = 56/99 (56.57%), Postives = 67/99 (67.68%), Query Frame = 0
Query:   37 NTDVLSHLLDFVAEDQYLFFAAVSRAWTSVWRAAQRPAATRQVTPDTSESQLRESLEAGLPLDKAQLSAALARHGHLELLQLARERGCAWGAVTCSAAA 135
            N D+L  ++ FVAE Q+LFFA VSRAW   W    RPA T  VT D+S SQLR S E GLP D+ +L AA+AR G+LELL+ AR  GCAW  +T S AA
Sbjct:   60 NVDLLRSIVRFVAEKQFLFFAPVSRAWREAWGC--RPAVTSWVTEDSSVSQLRYSFERGLPRDRPELCAAIARLGNLELLRSARGSGCAWNGLTFSEAA 156          
BLAST of mRNA_C-linearis_contig10.449.1 vs. uniprot
Match: D8LDD9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDD9_ECTSI)

HSP 1 Score: 92.4 bits (228), Expect = 4.940e-18
Identity = 49/97 (50.52%), Postives = 63/97 (64.95%), Query Frame = 0
Query:   39 DVLSHLLDFVAEDQYLFFAAVSRAWTSVWRAAQRPAATRQVTPDTSESQLRESLEAGLPLDKAQLSAALARHGHLELLQLARERGCAWGAVTCSAAA 135
            DV+SH  +FV +DQ+LFFA+VSRAW   WR   RP +TR +TPDTS SQLR S++ GL      +  A+A  G L+LL+ AR  G  W  +TC  AA
Sbjct:   10 DVISHASEFVHDDQFLFFASVSRAWRGAWRG--RPTSTRAITPDTSPSQLRHSVDCGLSPGGTAVCTAIASLGRLDLLRAARALGFRWDKMTCWKAA 104          
BLAST of mRNA_C-linearis_contig10.449.1 vs. uniprot
Match: D7FH77_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FH77_ECTSI)

HSP 1 Score: 83.2 bits (204), Expect = 1.160e-14
Identity = 43/103 (41.75%), Postives = 60/103 (58.25%), Query Frame = 0
Query:   28 PTAVGLAITNTDVLSHLLDFVAEDQYLFFAAVSRAWTSVWRAAQRPAATRQVTPDTSESQLRESLEAGLPLDKAQLSAALARHGHLELLQLARERGCAWGAVT 130
            P  V   + N D+L  L+ FVA++ +LFF  V R W + W    RP  TR  T D + +QL+   + GL     +L AA+AR G ++LL+LAR+ GC WGA T
Sbjct:    3 PGIVPSVLNNPDILGCLISFVADESFLFFGPVCRDWRAAW--GNRPTTTRIATSDLTPTQLQRGFDCGLTRTNPELCAAIARLGDVDLLELARDNGCRWGAST 103          
BLAST of mRNA_C-linearis_contig10.449.1 vs. uniprot
Match: A0A6H5L0J7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0J7_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 7.930e-12
Identity = 42/93 (45.16%), Postives = 56/93 (60.22%), Query Frame = 0
Query:   39 DVLSHLLDFVAEDQYLFFAAVSRAWTSVWRAAQRPAATRQVTPDTSESQLRESLEAGLPLDKAQLSAALARHGHLELLQLARERGCAWGAVTC 131
            D++S + +FV ++QYLFFA+VSR W  VW   +RP  T+ +T DTS  QL  S E GL    A +   +A  G L+LL+ AR  GC W   TC
Sbjct:    8 DIVSTVAEFVDDNQYLFFASVSRGWRDVW--GKRPTVTKALTADTSVPQLSLSFECGLRRTAA-VCETVAGLGRLDLLRRARAMGCQWNENTC 97          
BLAST of mRNA_C-linearis_contig10.449.1 vs. uniprot
Match: D7FMS7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMS7_ECTSI)

HSP 1 Score: 74.7 bits (182), Expect = 1.740e-11
Identity = 43/93 (46.24%), Postives = 57/93 (61.29%), Query Frame = 0
Query:   39 DVLSHLLDFVAEDQYLFFAAVSRAWTSVWRAAQRPAATRQVTPDTSESQLRESLEAGLPLDKAQLSAALARHGHLELLQLARERGCAWGAVTC 131
            D++S + +FV ++QYLFFA+VSR W  VW   +RP  T+ +T DTS SQL  S E GL    A +   +A  G L+LL+ AR  GC W   TC
Sbjct:   10 DIVSTVGEFVDDNQYLFFASVSRGWRDVW--GKRPTVTKALTADTSVSQLSLSFECGLRRTAA-VCETVAGLGRLDLLRRARAMGCPWNENTC 99          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.449.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KPZ6_9PHAE5.290e-2156.57Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LDD9_ECTSI4.940e-1850.52Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FH77_ECTSI1.160e-1441.75Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5L0J7_9PHAE7.930e-1245.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FMS7_ECTSI1.740e-1146.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 99..317
e-value: 5.0E-19
score: 70.1
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 108..312
NoneNo IPR availablePANTHERPTHR46586FAMILY NOT NAMEDcoord: 267..316
coord: 56..294

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:409506..412253 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.449.1mRNA_C-linearis_contig10.449.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig10 408903..412497 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig10.449.1 ID=prot_C-linearis_contig10.449.1|Name=mRNA_C-linearis_contig10.449.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=318bp
MGPQQQGAGDGLAEGTASSSTDGAPSAPTAVGLAITNTDVLSHLLDFVAE
DQYLFFAAVSRAWTSVWRAAQRPAATRQVTPDTSESQLRESLEAGLPLDK
AQLSAALARHGHLELLQLARERGCAWGAVTCSAAAGAGHLELLQWCKYNG
CPWDDRTLTEAARGDHAEVLEWARMFGCEVSMGVPTAAAGAGNLNLLKYL
IQDGFPVCAGACGAAAKSGHLEILEYLVENECPVDEMTLFGVVLNGQLAV
VEWALGEGVEFNDLGEYAFCDAVKKGRLAVVRLLHRHGCPWDEASCLAAA
IEGGHEEIASWIRENRS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf