mRNA_C-linearis_contig98.17132.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig98.17132.1
Unique NamemRNA_C-linearis_contig98.17132.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
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BLAST of mRNA_C-linearis_contig98.17132.1 vs. uniprot
Match: A0A6H5KTE1_9PHAE (NAD(P)-bd_dom domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KTE1_9PHAE)

HSP 1 Score: 431 bits (1108), Expect = 1.060e-144
Identity = 225/274 (82.12%), Postives = 249/274 (90.88%), Query Frame = 2 
Query:  326 MKLLHLLCVAGAMA-TARGLAPNILVLGGTGFIGSTVSRIAIDNGCQVTSLSRRGTPSPDSDTVPGVTFLKGDATDPDVLAKVISDG--NFDGVVHAVGMLFAGSLNRYASGSGSVPNPGTTYDKITRQTAFAATAALEDLARGG-EQRPFVFISAAEAKWGFDGIFEGSPVGFLHDYLVAKRAAEDELLNNKPSLRGIVLRPSLVWTKQRPAALPAVAAFQLGSRLGLPFIDRPVNVETLATAAVEALFDSSVRGVQDWRSMQKLASSYESNK 1135
            M+LL LL     +  TA  LAP ILVLGGTGFIGSTVSRIA+D+GC+VTSLSRRGTPSPDSD +PGV FLKGDATDP V+ +VI+DG  ++DGVVHAVGMLFAGSLNR+ASGSGSVP+PGTTYDKITRQTAFAATAAL+ LA+GG +QRPFVFISAAEAKWGFDGIFEGSPVGFLHDYLVAKRA EDELLNNKPSLRG+VLRPSLVWTK+RP AL  VAAFQ+GSRLGLPFIDRPV+VETLA+AAVEALFDSSVRGVQDWR M+KLA SY++NK
Sbjct:    1 MQLLTLLIALAVVGDTAMALAPKILVLGGTGFIGSTVSRIAVDSGCEVTSLSRRGTPSPDSDPLPGVNFLKGDATDPAVVRQVINDGKCDYDGVVHAVGMLFAGSLNRFASGSGSVPDPGTTYDKITRQTAFAATAALDALAQGGSQQRPFVFISAAEAKWGFDGIFEGSPVGFLHDYLVAKRAVEDELLNNKPSLRGVVLRPSLVWTKRRPGALLPVAAFQIGSRLGLPFIDRPVHVETLASAAVEALFDSSVRGVQDWRGMEKLAGSYKANK 274
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BLAST of mRNA_C-linearis_contig98.17132.1 vs. uniprot
Match: A0A835YPV7_9STRA (NAD(P)-bd_dom domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPV7_9STRA)

HSP 1 Score: 279 bits (713), Expect = 1.240e-85
Identity = 153/281 (54.45%), Postives = 200/281 (71.17%), Query Frame = 2 
Query:  281 LFLLPLPATSKPLVRMKLLHLLCVAGAMATARGLAPN-ILVLGGTGFIGSTVSRIAIDNGCQVTSLSRRGTPSPDSDTVPGVTFLKGDATDPDVLAKVISDGNFDGVVHAVGMLFAGSLNRYASGSGSVPNPGTTYDKITRQTAFAATAALEDLARGGEQ-RPFVFISAAEAKWGFDGIFEGSPVGFLHDYLVAKRAAEDELLNNKPSLRGIVLRPSLVWTKQRPAALPAVAAFQLGSRLGLPFIDRPVNVETLATAAVEALFDSSVRGVQDWRSMQKLAS 1117
            L L+P  A   P+ +   LHL      MAT+  LA N +LVLGGTGF+G T+++ A++ G  VTSLSRRG      D +   T+L+GDA+D   +A+V+ +G FD VVHA+GML   SLNR+ASGSGSVP  G TYD++TRQT FAA  A+    + G+   PFVF+SAAEA W  D +FEG+P+ FL  YLVAKRAAE+ LL++  +LR  VLRPSLVWTK+RPAALPAV+AF   + +G+PFIDRPV+V TLA AAVEAL D+S  G Q+++ M++LA+
Sbjct:    2 LLLVPAFALVSPVQQ---LHLPAALHMMATSSSLAANRLLVLGGTGFVGGTIAQEAVNRGYSVTSLSRRGRLDDADDRI---TWLEGDASDAGTVARVVQEGEFDAVVHAIGMLLDNSLNRFASGSGSVPGEGATYDQVTRQTVFAAADAVVSNRKAGQPPTPFVFVSAAEAAWTKDALFEGTPLAFLRRYLVAKRAAEERLLSDARNLRATVLRPSLVWTKERPAALPAVSAFTAANAIGIPFIDRPVSVTTLAAAAVEALEDASCSGTQNYKGMERLAA 276
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BLAST of mRNA_C-linearis_contig98.17132.1 vs. uniprot
Match: L1I751_GUITC (Epimerase domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1I751_GUITC)

HSP 1 Score: 233 bits (594), Expect = 2.770e-68
Identity = 126/251 (50.20%), Postives = 170/251 (67.73%), Query Frame = 2 
Query:  389 NILVLGGTGFIGSTVSRIAIDNGCQVTSLSRRGTPS--PDSDTVPGVTFLKGDATDPDVLAKVISDGNFDGVVHAVGMLFAGSLNRYASGSGSVPNPGTTYDKITRQTAF-AATAALEDLARGGEQRPFVFISAAEAKWGFDGIFEGSPVGFLHDYLVAKRAAEDELLNNKPS---LRGIVLRPSLVWTKQRPAALPAVAAFQLGSRLGLPFIDRPVNVETLATAAVEALFDSSVRGVQDWRSMQKLASSY 1123
             ILVLGGTGF+GS V+++AI+ G +V +LSRRG P+    S     + + KGDAT    + KV+ +G F  VVHA+GMLF   LN+YASGSGSVP  G+TYD+ITRQTAF A  AA    +   +  PF F+SAAE +W FD  FEG+P+ +L  YL+AKRA E EL++   +   L+ I++RPSL+WT  RP AL  VAAF  G+RLGLPF+D+PV V TL+ A ++ L   S +GV ++  M++LA  +
Sbjct:   17 KILVLGGTGFVGSNVAQLAIERGYEVVALSRRGEPTGASRSGAASKIAWRKGDATKKADIEKVMEEGGFTAVVHAIGMLFETELNKYASGSGSVPRAGSTYDEITRQTAFNAMEAAASSSSASSDPIPFAFVSAAEVRWTFDKSFEGTPLDWLRRYLIAKRAVESELIDVYGAGGLLKPIIVRPSLIWTWDRPGALLPVAAFTFGNRLGLPFVDKPVQVSTLSKAILKGLESKSEKGVYNFEGMERLAKEF 267
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BLAST of mRNA_C-linearis_contig98.17132.1 vs. uniprot
Match: A0A7S0QX38_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0QX38_9CHLO)

HSP 1 Score: 235 bits (600), Expect = 2.890e-68
Identity = 142/283 (50.18%), Postives = 181/283 (63.96%), Query Frame = 2 
Query:  293 PLPATSKPLVRMKLLHLLCVAGAMATARGLAPNILVLGGTGFIGSTVSRIAIDNGCQVTSLSRRGTPSPDSDTVPGVTFLKGDAT-DPDVLAKVISDGNFDGVVHAVGMLFAGSLNRYASGSGSVPNPGTTYDKITRQTAFAATAALEDLARGGEQR---PFVFISAAEAKWGFDGIFEGSPVGFLHDYLVAKRAAEDELLNN---KPSLRGIVLRPSLVWTKQRPAALPAVAAFQLGSRLGLPFIDRPVNVETLATAAVEALFDSSVRGVQDWRSMQKLASS 1120
            P P    PLV+     L   + A       +  ILVLGGTG++GS V RIA+  G  V S+SRRG     SD + GV + KGD   DP ++A ++S+G FDGV+HA+GML     N++ASGSGSVP PG+TYD++TRQTA AA +A      G +     PFVF+SAAEA W  D      PV FL  YL AKRA EDELLNN       R ++LRPSLV++  R A+LPAV AF LG+ L LP IDRPV VETLA AA++A+ D SV GVQ++ +M+ LA++
Sbjct:   59 PKPMCPTPLVKKSSSKLRATSKAAEAPS--SKKILVLGGTGYVGSEVCRIALSRGYSVVSVSRRGLVE-GSDQLKGVDWRKGDVVADPAIVAHILSEGGFDGVMHAIGMLLESDANKFASGSGSVPTPGSTYDQVTRQTALAAASAFSAACEGTDASSPPPFVFVSAAEAGWTQD-----PPVPFLVSYLKAKRAVEDELLNNYGASNKFRPVILRPSLVYSMDRTASLPAVGAFFLGNMLKLPGIDRPVLVETLAKAALKAMEDESVAGVQNFEAMEDLAAA 333
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BLAST of mRNA_C-linearis_contig98.17132.1 vs. uniprot
Match: C1E365_MICCC (Epimerase domain-containing protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E365_MICCC)

HSP 1 Score: 210 bits (535), Expect = 4.510e-59
Identity = 129/274 (47.08%), Postives = 162/274 (59.12%), Query Frame = 2 
Query:  365 ATARGLAPNILVLGGTGFIGSTVSRIAIDNGCQVTSLSRRGTPSPDSDTVPG-----VTFLKGDATDPDVLAKVISDGNFDGVVHAVGMLFAGSLNRYASGSGSVPNPGTTYDKITRQTAF-AATAALE--------DLARGGEQR--------PFVFISAAEAKWGFDGIFEGSPVGFLHDYLVAKRAAEDEL--LNNKPSLRGIVLRPSLVWTKQRPAALPAVAAFQLGSRLGLPFIDRPVNVETLATAAVEALFDSSVRGVQDWRSMQKLA 1114
            A + G    +LVLGGTGFIGS +   A+ +G  V S+SRRG P  D    P      V + KGD   PD +A V+ +G F   +HAVGML A  +N  ASGSGS P+PG TYD +TR TA  AA AA          D A GG           PFVF+SAAEA+W F      +PV +L DYL+AKRA E  L  + +   +R   LRPSLV+   +PAA+PAV AF LG+ LGLPF+DRPV V+TLA+AAV  + D    G  D+R M++LA
Sbjct:   43 AGSGGTKGKLLVLGGTGFIGSKICERALSSGYDVVSISRRGDPPGDPHRYPDGVWNRVDWRKGDCVQPDTIATVLGEGGFVACIHAVGMLLASDINALASGSGSKPSPGATYDDVTRVTALNAADAAARLCTAVPNADTAGGGGTGGTTSKAPVPFVFVSAAEARWTFK-----APVAWLEDYLIAKRAVEARLREMTDAGEVRAACLRPSLVYCLDKPAAMPAVGAFYLGNLLGLPFVDRPVTVDTLASAAVRCVEDGRSTGALDYREMERLA 311
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BLAST of mRNA_C-linearis_contig98.17132.1 vs. uniprot
Match: C1N367_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N367_MICPC)

HSP 1 Score: 208 bits (530), Expect = 3.880e-58
Identity = 122/272 (44.85%), Postives = 166/272 (61.03%), Query Frame = 2 
Query:  389 NILVLGGTGFIGSTVSRIAIDNGCQVTSLSRRGTPS-----PDSDTVPGVTFLKGDATDPDVLAKVISDGNFDGVVHAVGMLFAGSLNRYASGSGSVPNPGTTYDKITRQTAFAATAALEDLAR----------------GGEQRPFVFISAAEAKWGFDGIFEGSPVGFLHDYLVAKRAAEDEL--LNNKPSLRGIVLRPSLVWTKQRPAALPAVAAFQLGSRLGLPFIDRPVNVETLATAAVEALFDSSVRGVQDWRSMQKLASSYESNK 1135
             +LVLGGTGF+G  V   A++ G  V S+SRRG PS     P S     V +  GD T P  +  V+++G F G VHAVGML A  LN YASGSGSVP+ G+TYD +TR++AF A  A+ +L +                     PFVF+SAAEAKW F      +PV +L +YLVAKRA E++L  +    +LR  +LRPSLV+   +PA+ PAVAAF +G+ +GLPF+DRPV    LATAAV A+ + +V G+ D+  +++L+     N+
Sbjct:   60 KLLVLGGTGFVGGNVIERALEGGYSVVSISRRGAPSASARGPTSSLDGRVDWRVGDVTLPSTVRDVLAEGGFVGCVHAVGMLLASDLNAYASGSGSVPSAGSTYDDVTRKSAFHAADAVAELVKPVDFTSASDGTRIYTTSKRSPPFVFVSAAEAKWDFR-----APVEWLEEYLVAKRAVEEKLGAMTAAGALRATILRPSLVYAFDKPASFPAVAAFVIGNAIGLPFVDRPVTAGALATAAVRAVKEEAVEGILDYVGIEELSCDASFNE 326
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BLAST of mRNA_C-linearis_contig98.17132.1 vs. uniprot
Match: A0A1Z5JSM0_FISSO (Epimerase domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JSM0_FISSO)

HSP 1 Score: 189 bits (479), Expect = 3.930e-51
Identity = 115/256 (44.92%), Postives = 158/256 (61.72%), Query Frame = 2 
Query:  389 NILVLGGTGFIGSTVSRIAIDNGCQVTSLSRRGTPSPDSDTVPGVTFLKGDATDPDVLAKVISDG-NFDGVVHAVGMLF-----AGSLNRYASGSGSVPNPGTTYDKITRQTAFAATAALEDLARGG--EQRPFVFISAAEAKW----GFDGIFEGSPVGFLHDYLVAKRAAEDELLNNKPSLRGIVLRPSLVWTKQRPAALPAVAAFQLGSRLGLPFIDRPVNVETLATAAVEALFDSSVRGVQDWRSMQKLASS 1120
             +LVLGGTGF+G  V   A+  G  V SLSRRG P   S  V  V + +GDA     +A +  +  NF GVVH +G+LF      GSLN Y SGSGS+P+  +TY+ ITRQTAF A     + A     +Q PF F SAAEA W    G D I       FL  YLVAKRA E +LL+++P+LR I++RPSL+++  RP + P V AF +G+++GLPF+DRPV V+ L+ A V+A+    V+G+  ++ +  ++SS
Sbjct:   52 KLLVLGGTGFLGQNVCEQALQAGYDVVSLSRRGLPP--SGGVSNVDYRQGDARLKASVANIFGESSNFAGVVHCIGLLFDDQSGLGSLNVYVSGSGSLPDAASTYETITRQTAFNAIEVATEYANKNALQQFPFCFTSAAEAGWPDVAGGDLIENYLAPDFLKRYLVAKRAVEAKLLSSEPTLRPIIVRPSLIYSMDRPLSFPPVGAFFVGNKVGLPFVDRPVTVQNLSNAMVKAIARDDVKGLLRYQQIDDISSS 305
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BLAST of mRNA_C-linearis_contig98.17132.1 vs. uniprot
Match: A0A7S3QJZ9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QJZ9_9STRA)

HSP 1 Score: 182 bits (463), Expect = 9.360e-49
Identity = 112/261 (42.91%), Postives = 161/261 (61.69%), Query Frame = 2 
Query:  374 RGLAPNILVLGGTGFIGSTVSRIAIDNGCQVTSLSRRGTPSPDSD--TVPGVTFLKGDATDPDVLAKVISDGNFDGVVHAVGMLFAG-----SLNRYASGSGSVPNPGTTYDKITRQTAFAATAALEDLA--RGGEQRPFVFISAAEAKW----GFDGIFEGSPVGFLHDYLVAKRAAEDELLNNKPSL-RGIVLRPSLVWTKQRPAALPAVAAFQLGSRLGLPFIDRPVNVETLATAAVEALFDSSVRGVQDWRSMQKLA 1114
            +G    ILVLGG+GF+G T+++ A   G  VTSLSRRG P  D    T   + +  GDA +  V+  ++ +G++  + H +G+L  G     S NR+ SGSGSVP    TYD+ITR TAF A AA E     RGG   PF+F SAAEA W    G   +       +L  YL AKR+ E+ L+N+  +L R ++ RPSL+++  + A+LP   AF +G+R+GLPF+DRPV+V+TL+TAAV ++    VRGVQ ++ + +L+
Sbjct:   53 KGNKGKILVLGGSGFLGGTIAQRAALEGYSVTSLSRRGKPEKDPKDFTNDKIDYRIGDARESLVIENILDEGDYTAIFHCIGILLDGDSGLRSFNRFVSGSGSVPEENATYDEITRLTAFNAIAAAESYVSKRGGGPLPFIFTSAAEAGWPDVRGGKFVERTLTPRWLKRYLEAKRSVENRLMNSPQTLLRPVIFRPSLIYSLDKIASLPPWGAFFVGNRVGLPFVDRPVSVQTLSTAAVRSI-SKEVRGVQRFKEIDQLS 312
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BLAST of mRNA_C-linearis_contig98.17132.1 vs. uniprot
Match: A0A1Q9D6C4_SYMMI (NAD(P)-bd_dom domain-containing protein n=6 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9D6C4_SYMMI)

HSP 1 Score: 176 bits (447), Expect = 3.270e-46
Identity = 118/294 (40.14%), Postives = 165/294 (56.12%), Query Frame = 2 
Query:  284 FLLPLPATSKPLVRMKLLHLLCVAGAMATAR---GLAPN----ILVLGGTGFIGSTVSRIAIDNGCQVTSLSRRG-TPSPDSDTVPGVTFLKGDATDPDVLAKVISDGNFDGVVHAVGMLF-----AGSLNRYASGSGSVPNPGTTYDKITRQTAFAATAALEDLARG--GEQRPFVFISAAEAKWGFDGI---FEGSPVGFLHDYLVAKRAAEDELLNNKPSLRGIVLRPSLVWTKQRPAALPAVAAFQLGSRLGLPFIDRPVNVETLATAAVEALFDSSVRGVQDWRSMQKL 1111
            +LL LP T      +  ++         TAR   G  P+    +LVLGG G++G  V R+A+  G QVTSLSRRG  P P +  +  V ++KG+A D   +  V+  G  D VVHA+G+LF       +LN   SGSGS P+  +TYDKITRQTAF    A++   R       P +F+SAAEA W    +    E     +L +YLVAKRA E EL ++  ++R  + RPSL+W+  +   LP +  F L + +G+PF+D+ V V TL+ A V AL D  V GVQ +R M++L
Sbjct:   41 WLLQLPTTKDVASNLVFVNTQAPVTRPVTARAAEGEEPSAGKRLLVLGGNGYVGREVCRLAVQRGFQVTSLSRRGENPEPGNAELDQVKWVKGNAADSSTVQNVV--GEADAVVHAIGLLFDVNSGLTNLNLVVSGSGSTPDDTSTYDKITRQTAFNVINAIKGRIRMPFSPPMPMMFVSAAEAGWPDVALGPEVEKVAPAWLKEYLVAKRAVEGELASSTDTIRSAIFRPSLIWSWTKFDVLPVIPVFNLLNAVGVPFVDKTVTVFTLSKAIVAALEDEGVAGVQRFREMEEL 332
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BLAST of mRNA_C-linearis_contig98.17132.1 vs. uniprot
Match: A0A7R9UDT9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UDT9_9STRA)

HSP 1 Score: 173 bits (439), Expect = 2.170e-45
Identity = 122/286 (42.66%), Postives = 162/286 (56.64%), Query Frame = 2 
Query:  332 LLHLLCVAGAMATARGLAP-----------NILVLGGTGFIGSTVSRIAIDNGCQVTSLSRRG-TPSPDSDTVPGVTFLKGDATDPDVLAKVISDGNFDGVVHAVGMLF-----AGSLNRYASGSGSVPNPGTTYDKITRQTAFAA---TAALEDLARGGEQRPFVFISAAEAKWG---FDGIFEGSPVGFLHDYLVAKRAAEDELLNNKPS-LRGIVLRPSLVWTKQRPAALPAVAAFQLGSRLGLPFIDRPVNVETLATAAVEALFDSSVRGVQDWRSMQKLAS 1117
            LL  L  AGA+ T R  AP            +LVLGGTGF+GS V   AI  G  VT+LSRRG  P PD   +  V +L  DAT+   L K++S+ + D VVHAVG+LF       +LN   SGS SVP   +TYD ITRQTA  A   T +  +  +  ++R FVF+SAAEA W         E     +L  YL AKR+ E  LLN + +  R ++ RPSL+WT  +   LP +  F + S +GLPF+D+ V VE LA A VEA    SV G+Q ++ +++L+S
Sbjct:   21 LLPSLSFAGALLTPRLAAPAGGREALAIKKKMLVLGGTGFVGSRVCEEAIKKGYAVTALSRRGQNPKPDDAQLSQVNWLTCDATEEAQLGKIMSEVDPDVVVHAVGLLFDIDSGLANLNLVVSGSKSVPGEKSTYDAITRQTAENALKNTISPRNPLKSLKKRTFVFVSAAEAGWPEVPLGDRVESLAPEWLVRYLGAKRSVEASLLNAQSNNFRPVIFRPSLIWTWSKLDVLPVIPVFNIASAIGLPFVDKTVRVEDLAAAIVEAAGTESVSGIQRFKEVEELSS 306
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig98.17132.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KTE1_9PHAE1.060e-14482.12NAD(P)-bd_dom domain-containing protein n=2 Tax=Ec... [more]
A0A835YPV7_9STRA1.240e-8554.45NAD(P)-bd_dom domain-containing protein n=1 Tax=Tr... [more]
L1I751_GUITC2.770e-6850.20Epimerase domain-containing protein n=1 Tax=Guilla... [more]
A0A7S0QX38_9CHLO2.890e-6850.18Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
C1E365_MICCC4.510e-5947.08Epimerase domain-containing protein n=1 Tax=Microm... [more]
C1N367_MICPC3.880e-5844.85Predicted protein n=1 Tax=Micromonas pusilla (stra... [more]
A0A1Z5JSM0_FISSO3.930e-5144.92Epimerase domain-containing protein n=2 Tax=Fistul... [more]
A0A7S3QJZ9_9STRA9.360e-4942.91Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A1Q9D6C4_SYMMI3.270e-4640.14NAD(P)-bd_dom domain-containing protein n=6 Tax=Sy... [more]
A0A7R9UDT9_9STRA2.170e-4542.66Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig98contigC-linearis_contig98:467903..473958 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score440.7
Seed ortholog evalue5.7e-121
Seed eggNOG ortholog2880.D8LJU3
Hectar predicted targeting categorysignal peptide
GOsGO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016491,GO:0016651,GO:0042180,GO:0042181,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:1901004,GO:1901006,GO:1901576,GO:1901661,GO:1901663
EggNOG free text desc.ubiquinone-6 biosynthetic process
EggNOG OGsCOG0702@1,KOG4288@2759
Ec32 ortholog descriptionNAD(P)-binding domain
Ec32 orthologEc-23_000150.1
COG Functional cat.GM
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size1977
Cds size906
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig98.17132.1prot_C-linearis_contig98.17132.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig98 468228..473212 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930842.8036547-UTR-C-linearis_contig98:467902..4682271622930842.8036547-UTR-C-linearis_contig98:467902..468227Chordaria linearis ClinC8C monoicousUTRC-linearis_contig98 467903..468227 +
1690881277.9862561-UTR-C-linearis_contig98:467902..4682271690881277.9862561-UTR-C-linearis_contig98:467902..468227Chordaria linearis ClinC8C monoicousUTRC-linearis_contig98 467903..468227 +
1622930842.9297915-UTR-C-linearis_contig98:473212..4739581622930842.9297915-UTR-C-linearis_contig98:473212..473958Chordaria linearis ClinC8C monoicousUTRC-linearis_contig98 473213..473958 +
1690881278.0629592-UTR-C-linearis_contig98:473212..4739581690881278.0629592-UTR-C-linearis_contig98:473212..473958Chordaria linearis ClinC8C monoicousUTRC-linearis_contig98 473213..473958 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930842.8157763-CDS-C-linearis_contig98:468227..4683651622930842.8157763-CDS-C-linearis_contig98:468227..468365Chordaria linearis ClinC8C monoicousCDSC-linearis_contig98 468228..468365 +
1690881277.999174-CDS-C-linearis_contig98:468227..4683651690881277.999174-CDS-C-linearis_contig98:468227..468365Chordaria linearis ClinC8C monoicousCDSC-linearis_contig98 468228..468365 +
1622930842.8323312-CDS-C-linearis_contig98:470095..4702131622930842.8323312-CDS-C-linearis_contig98:470095..470213Chordaria linearis ClinC8C monoicousCDSC-linearis_contig98 470096..470213 +
1690881278.0080724-CDS-C-linearis_contig98:470095..4702131690881278.0080724-CDS-C-linearis_contig98:470095..470213Chordaria linearis ClinC8C monoicousCDSC-linearis_contig98 470096..470213 +
1622930842.853713-CDS-C-linearis_contig98:470461..4706371622930842.853713-CDS-C-linearis_contig98:470461..470637Chordaria linearis ClinC8C monoicousCDSC-linearis_contig98 470462..470637 +
1690881278.0183947-CDS-C-linearis_contig98:470461..4706371690881278.0183947-CDS-C-linearis_contig98:470461..470637Chordaria linearis ClinC8C monoicousCDSC-linearis_contig98 470462..470637 +
1622930842.8720803-CDS-C-linearis_contig98:471481..4716011622930842.8720803-CDS-C-linearis_contig98:471481..471601Chordaria linearis ClinC8C monoicousCDSC-linearis_contig98 471482..471601 +
1690881278.0272532-CDS-C-linearis_contig98:471481..4716011690881278.0272532-CDS-C-linearis_contig98:471481..471601Chordaria linearis ClinC8C monoicousCDSC-linearis_contig98 471482..471601 +
1622930842.8895543-CDS-C-linearis_contig98:472099..4722091622930842.8895543-CDS-C-linearis_contig98:472099..472209Chordaria linearis ClinC8C monoicousCDSC-linearis_contig98 472100..472209 +
1690881278.0400379-CDS-C-linearis_contig98:472099..4722091690881278.0400379-CDS-C-linearis_contig98:472099..472209Chordaria linearis ClinC8C monoicousCDSC-linearis_contig98 472100..472209 +
1622930842.9060705-CDS-C-linearis_contig98:472968..4732121622930842.9060705-CDS-C-linearis_contig98:472968..473212Chordaria linearis ClinC8C monoicousCDSC-linearis_contig98 472969..473212 +
1690881278.0502625-CDS-C-linearis_contig98:472968..4732121690881278.0502625-CDS-C-linearis_contig98:472968..473212Chordaria linearis ClinC8C monoicousCDSC-linearis_contig98 472969..473212 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig98.17132.1

>prot_C-linearis_contig98.17132.1 ID=prot_C-linearis_contig98.17132.1|Name=mRNA_C-linearis_contig98.17132.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=302bp
MKLLHLLCVAGAMATARGLAPNILVLGGTGFIGSTVSRIAIDNGCQVTSL
SRRGTPSPDSDTVPGVTFLKGDATDPDVLAKVISDGNFDGVVHAVGMLFA
GSLNRYASGSGSVPNPGTTYDKITRQTAFAATAALEDLARGGEQRPFVFI
SAAEAKWGFDGIFEGSPVGFLHDYLVAKRAAEDELLNNKPSLRGIVLRPS
LVWTKQRPAALPAVAAFQLGSRLGLPFIDRPVNVETLATAAVEALFDSSV
RGVQDWRSMQKLASSYESNKPSRATAAAAAAASASSTAEISGDGSACREG
L*
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mRNA from alignment at C-linearis_contig98:467903..473958+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig98.17132.1 ID=mRNA_C-linearis_contig98.17132.1|Name=mRNA_C-linearis_contig98.17132.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=6056bp|location=Sequence derived from alignment at C-linearis_contig98:467903..473958+ (Chordaria linearis ClinC8C monoicous)
ATTGTTGCAACGCTCAGAGCACGAAGTGGTCACGAGCTGGAGAGGGGAGG
CTCGAGCACACTGCTCCACCTCTACGCCTTCGAGGATCGGTTGCAACGGG
TTGCCGATACGACAGCTCCCCTAGAGCCCTCTGTATTATATCTACAGAGT
ATCTCTTTTTGCTTTTTTGCGAGTTCGGGGGTCTCCTCCTCTTCGAGCTT
GGGAACGGCGGTGTACAGCAGTATTCGCAGAAAAACGCGGTGGTAGGTGG
TAGGTAGGTAGGTGTTACGCCGCTTTTTTTCTTTTTTTGCTTCCGCTGCC
CGCGACCTCAAAACCCCTTGTCCGGATGAAGCTTCTTCATCTGCTCTGCG
TAGCAGGGGCGATGGCAACTGCTCGAGGACTGGCGCCTAACATCCTGGTG
CTCGGCGGTACGGGATTCATTGGTTCCACCGTATCGCGCATCGCCATAGA
TAACGGATGTCAGGCAAGAAGAGCGGTGATTTTGTGATTTTGGGCTGAGG
TGTGTCAGTGCGAGATCATGATGCCTATCCAGTCAGCTCTGAAATTGACT
TCTACACGGGGCGAAGGGAGAGAGGGATTGGGGATCAAGCAAGATAGGAT
GCCGTTGCCAATAATGAGGCGAAGATAGCTGCAGTGTTCATGAGCGTCAC
GCACAACACTCCACCAACCCGCAACCGGCACGACGGTAGCATTGGGGAAA
ACACACACAAGCGCACTTTTTGGCTTTTTGGCTTTCCTCGGTCGCCCCGG
TGGACTACATAAAGTAGTTTCCTCGACCCACTAAATCCAAATACACCCTT
CTCGCGATAAAATCCAAGGCAAGCACCGCAGGAGGAAGGTGGGGCAAAAA
AGAAACAGAAAAAGAAGAAAAAAGCCCCAGTGTTTTTACCCCCTCCTGTG
TGACCCTGGTTGGTTCTAGCTGCAGAAAAAAAAAGTGGTAGTACTCTAAA
TACACCGCAACGTGTAGTACACGTCTCGCCTTGATCGGAAAGGGACTGTC
GCCAAAATAAATGGGACGAAAACACACACACACACCTTGTGGCCTTTTAT
CCCCGTACTGCCCGGCTTGACTGCCAGCCTGCCTTTCTCGTTTTCCCGGG
CTCTTGTACCCCCCCGCCTCCGCGTGGCCTCGTGTGGCTTTATTTTTCTA
TTTTATGTTTTTTAAAGAAATCATAAAATCAAAGACGGAACCTCCTCACA
TTAGAGACGGGACTCCGTGAGAATATAACGGTATTCCATACAGTGGTGTA
TTATTGGTCCGGCGTTTTTGTTTAGTCTCCCCCCCCCTCTGCACTGCATC
CGATCCCTGGAATTACTTCCAGGAATGGATGTGGTGCGGAGTGGGGGGTG
CCTGGTCGGCGAGAACCCGACACGGAACCCTCCGGCATTGTAGGCGGGTG
TGGGAAGCCTTCGGCTTGTCTTAGTCATCTCTCCTCCACTAGCGTGGTAC
CTCGTTTTTCTGGTGTTTTCCAACACCTTTCATTCTTTCTTCCGAGCGGT
ATGTATCCTATTTCTTCTCTGATTGAGCGCCAGCGAGACGCGAGACCCCT
CGGGGCCCAGTTTAGAATCATCGCAGGGCGCGCATGTACCATATTTTCTG
CTCGAGTTTATTTGCGCCGTCGAGTGTGCCCAGTTTTGTGACCACGGGCT
CCCATGGATGTTTTGGAAAGGCAGCTAATGTGAGAAACAAACAAAAAACG
TAAAACACACGCGCGCGCGTTGGTGAAGTAATGACAGCAAGACGTTTGGA
GTGAGCACTGATGCATGGATCAATTTGTCTACGCAGGCAGCTCGCTTGCT
TGAGCTCTTCATTCCCATATTGTACCCGATTTTCTTCTATTCTGGGCTTT
ATTCGCATCTACTGCTGTGTTTGTTGTAAGTGTAAATTTATATTTTCAGC
GCTCGCTGTGTCAAATTTCAAGAGTTGGGCTAGTACTCTCCTCTTGTACC
ATACTGGTAGACTGGAAGTGAAATGGGTTGTCCTATTTGTACCATGTATC
TCACACCGCCCGTCAGAGTGTACTAAAGCATGAATCCCCCCTCATTCGCC
CCAAGAGACTAGACTAGGGCGCTGGCTGCTTGCCAAGGGATCCAACACCG
AACACCTCCAGTAGCACTTTCCCTCTGATGACTGTCGGCCTGTCTCTTCT
TTTCGCATCAATACTTTTTATGTACTGCGGCGAGAAAGAACAGGTGACAT
CCCTGTCAAGACGAGGAACGCCTTCGCCGGACAGCGATACCGTCCCTGGC
GTCACCTTCCTTAAGGGCGATGCAACGGATCCCGATGTCCTGGCCAAAGT
TATCAGCGACGGTCCGTAGTTTGCTGTGACGACGCCAATCATGATGCAAG
ACAACACATCGCCGTATCATACACATGCGGCATTCGGGAACCCTGCCAAC
ACAGCAGCAGCAGCAGCAGCAGCAGCAGTTCCACCCCTAATCGAGCGGTT
GTTCGCACGACGCGCGCGAGGTACGCATGCACGGGCGTATTTCACGGGTA
TCCAAGACACGGACGGATTGCTGTAACGCTCGTAGCGCTCGTAATGCATC
GCACCGCAGGCAATTTCGACGGCGTTGTCCACGCCGTAGGGATGCTGTTC
GCCGGCAGCCTCAACCGCTACGCGAGCGGGTCCGGATCGGTGCCGAACCC
CGGCACGACGTACGACAAGATCACCAGGCAGACGGCCTTCGCGGCGACGG
CTGCTCTCGAAGATTTGGCCCGCGGGGGAGAGCAGGTAGTGCTTGAGGCT
GATGCTTTCGCTTTTAAGCAGTCGAGGTATTCTTGTCTTTTCTTGTCTCC
TGGGTTCTTCTTTCCCGGTCGCATGTTTCTGGCTGGGAGATGAAGGTTTT
CCAACCCGACATGGCTGTGCGCGCATTGTACAGCAGTATGTACAATACTG
GAAGAGGTGTTCCAAGTGCTATTATAGTAGTTCGGTTGGTTAGACGCGTG
CATGTACATAGCTCTCGTGACGCCACAGGCCATGGTCCCAGGACCTCAAG
TCGTCAAGACGATTTACCTTCGCTGCCACTCCCTCTCTCTCGGAACCTGC
AGCAACTTCATTTGTTCCCTTCAGCAGCTACATTTGTTCCCTTCAACTGC
AATTGTTCCCTTCAGCGGCTTCATTTGTTCCCTTCATTCAGCCCTGAGCC
GCCCTTGTCCGAATTCAAGCCACCCTCACTCGACGGAAAGGCTGGCACAC
CCAAAAGAAGGCGTTAACATCACACTTCGAAGTACGTATTGGTACATATC
GTATCATATGTACACACCTTCAAAGACTAAAATAAACAGCTCCAACACCA
CGCTTTACTTGCGGTTTCGAATCAATCCACGTGCCCTATAATACCGTAAA
TACCACCTTATTTCTTATTTCGGCCACACGTGCCCCCCCGGTGTCTGGCG
CTTCCTCCCAGTTCGCACTCCCGTGCCTGGCACACCGACGTGCACACATC
GTTGTGTTCAAACCCATCACGCTTCTTGCCGTGTGGCACTTTATGTGGCA
CTTTGTGGCACCTCACATCAGAGCCCGAGACCGTTCGTGTTTATCTTGTT
CCAAACCCACCACGCTTCTTGTCGTGTAGAGACCGTTCGTGTTTATCTCG
GCGGCGGAGGCTAAGTGGGGTTTCGACGGCATCTTCGAGGGGTCACCGGT
TGGGTTTCTGCACGACTACCTTGTCGCCAAAAGAGCCGCGGAGGACGAGG
TGTGTTGGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGGTGGTGGTGGTG
GTGGTGGTGGTGGTGAGTGGTGTTTTTTGTCGTTGCTCATCGCCCAGAAT
ATGTATTGTAGCATTTTAATACAACTTTTTTTTACCCCAAAAAATGCGAA
AACGAAAACTCGGGAGCGCAAACTCCCACCCCACACAGGCGCAGACCCGC
CCCGGCCCCGGCAACAGCTTGCGCGCATGATTAAGCTGTTGATGACTTTA
TTGAGAACTTATGTGCATCCTGTTGCGCGTTTCTGAACAACAGAAGCTGC
TGCCTTCTGCCTGCCCGCCGCAAGGCCGAGCGAGTGTTTTGATGAGCGTA
CAGCAGTATGATCCATGCCGCTGCTGTCGCCGTATTTCAAACGAACGTGC
ACGCGTACGCAGCCTTTGCTCCACTAAGTATCCGTCTTTTGTTCCTTTCC
TGCCCTGCGTGCGTTGGACTTGACTGGTGCCTCTCGTGTGTGTCCAGCTG
CTCAACAACAAGCCTTCGCTGAGGGGAATCGTCCTGAGACCGTCTCTGGT
GTGGACGAAACAGCGACCGGCAGCGTTACCTGCGGTGGCCGCGTTTCAGC
TAGGCAGGTAGATACCTACCGTTTTGTTACTTCACGCCAGCCGTCTATTT
TGCGTCCAACCTGGCTCGACGACACAATAACCCTCCCGCAACCCTCCCCC
CCCCCCCCCGGCAACAATAGTACAACATGTTTAGCCTTGATGCCACATTT
TGATGCCACATTTTCCTTCGTCAGGGAAGGCGCCAAGTTTACTCTCCTCG
TCTTTTTTTCCCCCAAGACTTTTCGTGCGGCATTTTTTTCGTTTCATCTG
TCTCCTGCCCCCCCCCCCGCGCCTTCCTTTGTGTTCCTTTGTTAACGTCG
ATGTTTGGCCTCGCTCCCCCGCTCCTTGTATATGTGTACTTGGAATTATG
CATAATGTCTGCGTTTCCTCTTGGCATGCGTGGTGGTGGTCTTGTGTGGG
CGTGTGGACACGGGCTGCTGCTGCTGCTGTTTAGCAAGTTTTGGATGTTT
CGGGTGGGGCCTTACCTTTTACATTGGGAGGAGGAGCAGACAACATTCCC
GCTCGCAATCGTAATCGTTGGTCAAAGCAAGCAGCATGCTTCCAACAGCC
GTCAGCAAAAACGCGAAAAGCAAAGCACCAACATGTCGGTGGTGCCCGCA
CGCAGCGGCGGTACAGGTATAGAGACAGAGCTCAGCACCTCCTCGAAAGA
GCAAGAGATAACATGCGAAGTCAACTGCTGTCTGCCCAACCACATAGAAA
GAGTACGCTACAATATCAGCACGCAATGACTTTACGCCCCCCCCCCCGGT
GTTTTGGCGACAACAGCCGGCTAGGCCTCCCGTTCATCGACAGGCCCGTC
AACGTGGAAACGCTGGCTACGGCGGCGGTGGAAGCACTGTTTGACTCGAG
CGTCCGCGGGGTTCAGGACTGGCGAAGCATGCAGAAGCTGGCGTCGAGCT
ACGAGTCGAACAAGCCGAGCAGAGCCACGGCAGCAGCAGCAGCAGCAGCT
TCGGCCTCGTCGACGGCCGAGATCAGCGGCGATGGAAGTGCCTGCCGAGA
GGGTCTGTAGACTAGTGGACATCTATATGTGGTGTTTTTTTATGTAATAA
GGAAAAACTTGGCCCATCGACATTGCTTGTAGAGGGGAGCGGAGGGAGGG
AGAGCTCCAGATCTTTTTTGCTCCGGAGACCATGGGTTCTCCCGGCCAGC
ATATGGGTGATAATTAGAAGGCTGGGCTTCTGGAGGCAGGTCGTGGTGCA
ACGAGGGAAGACGGGGGTGTCGTGTTTCGTGTTTCGTGCTTTGGATTATT
GGCTTGGAACCGTTCACTTCCACAGGGTTACCGTACCGTTTTGTCGCCTC
GGGATTGTAGACTAAACTACAAGACATCAATGCATGCCGGGGGGCGAGAA
CGGTCATGGGCTGGTGCGGTGCGCGTGACACCGCAAAAACTCCGAGGGGG
GCCAAAGTGTTGTGTGCTACAGCTACAGCAGTATTCTGTAGGGGGTTGCA
CAACTTTGCAATATTTGAGTGTGTCGAGAGGTTTAGATGGACCGCAAGAA
GACGGCTTGGGAGGGCACCACTTGTGCGAATCAAAGCAGCGGCAGCAGCA
GGAGGAGGAGCAGCAGCCAAGCGAAACACGAAGAGTTTGATTCCACCAAA
AATCACCTGGTGGCGTGGCGCCTACCAGCCGTTCGACATGGCGTGTGACC
TCTCCCTGAATGATTGTCGATGCCTCGATAGATGGATCAATTCGCAGGGC
AGGGCGCGCACCAACCCTCGACACGAAAAAAATGAGCGCTTATGATACTG
GGAAAA
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Coding sequence (CDS) from alignment at C-linearis_contig98:467903..473958+

>mRNA_C-linearis_contig98.17132.1 ID=mRNA_C-linearis_contig98.17132.1|Name=mRNA_C-linearis_contig98.17132.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1812bp|location=Sequence derived from alignment at C-linearis_contig98:467903..473958+ (Chordaria linearis ClinC8C monoicous)
ATGAAGCTTCTTCATCTGCTCTGCGTAGCAGGGGCGATGGCAACTGCTCG
AGGACTGGCGCCTAACATCCTGGTGCTCGGCGGTACGGGATTCATTGGTT
CCACCGTATCGCGCATCGCCATAGATAACGGATGTCAGATGAAGCTTCTT
CATCTGCTCTGCGTAGCAGGGGCGATGGCAACTGCTCGAGGACTGGCGCC
TAACATCCTGGTGCTCGGCGGTACGGGATTCATTGGTTCCACCGTATCGC
GCATCGCCATAGATAACGGATGTCAGGTGACATCCCTGTCAAGACGAGGA
ACGCCTTCGCCGGACAGCGATACCGTCCCTGGCGTCACCTTCCTTAAGGG
CGATGCAACGGATCCCGATGTCCTGGCCAAAGTTATCAGCGACGGTGACA
TCCCTGTCAAGACGAGGAACGCCTTCGCCGGACAGCGATACCGTCCCTGG
CGTCACCTTCCTTAAGGGCGATGCAACGGATCCCGATGTCCTGGCCAAAG
TTATCAGCGACGGCAATTTCGACGGCGTTGTCCACGCCGTAGGGATGCTG
TTCGCCGGCAGCCTCAACCGCTACGCGAGCGGGTCCGGATCGGTGCCGAA
CCCCGGCACGACGTACGACAAGATCACCAGGCAGACGGCCTTCGCGGCGA
CGGCTGCTCTCGAAGATTTGGCCCGCGGGGGAGAGCAGGCAATTTCGACG
GCGTTGTCCACGCCGTAGGGATGCTGTTCGCCGGCAGCCTCAACCGCTAC
GCGAGCGGGTCCGGATCGGTGCCGAACCCCGGCACGACGTACGACAAGAT
CACCAGGCAGACGGCCTTCGCGGCGACGGCTGCTCTCGAAGATTTGGCCC
GCGGGGGAGAGCAGAGACCGTTCGTGTTTATCTCGGCGGCGGAGGCTAAG
TGGGGTTTCGACGGCATCTTCGAGGGGTCACCGGTTGGGTTTCTGCACGA
CTACCTTGTCGCCAAAAGAGCCGCGGAGGACGAGAGACCGTTCGTGTTTA
TCTCGGCGGCGGAGGCTAAGTGGGGTTTCGACGGCATCTTCGAGGGGTCA
CCGGTTGGGTTTCTGCACGACTACCTTGTCGCCAAAAGAGCCGCGGAGGA
CGAGCTGCTCAACAACAAGCCTTCGCTGAGGGGAATCGTCCTGAGACCGT
CTCTGGTGTGGACGAAACAGCGACCGGCAGCGTTACCTGCGGTGGCCGCG
TTTCAGCTAGGCAGCTGCTCAACAACAAGCCTTCGCTGAGGGGAATCGTC
CTGAGACCGTCTCTGGTGTGGACGAAACAGCGACCGGCAGCGTTACCTGC
GGTGGCCGCGTTTCAGCTAGGCAGCCGGCTAGGCCTCCCGTTCATCGACA
GGCCCGTCAACGTGGAAACGCTGGCTACGGCGGCGGTGGAAGCACTGTTT
GACTCGAGCGTCCGCGGGGTTCAGGACTGGCGAAGCATGCAGAAGCTGGC
GTCGAGCTACGAGTCGAACAAGCCGAGCAGAGCCACGGCAGCAGCAGCAG
CAGCAGCTTCGGCCTCGTCGACGGCCGAGATCAGCGGCGATGGAAGTGCC
TGCCGAGAGGGTCTGTAGCCGGCTAGGCCTCCCGTTCATCGACAGGCCCG
TCAACGTGGAAACGCTGGCTACGGCGGCGGTGGAAGCACTGTTTGACTCG
AGCGTCCGCGGGGTTCAGGACTGGCGAAGCATGCAGAAGCTGGCGTCGAG
CTACGAGTCGAACAAGCCGAGCAGAGCCACGGCAGCAGCAGCAGCAGCAG
CTTCGGCCTCGTCGACGGCCGAGATCAGCGGCGATGGAAGTGCCTGCCGA
GAGGGTCTGTAG
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