prot_C-linearis_contig97.17072.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig97.17072.1
Unique Nameprot_C-linearis_contig97.17072.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length352
Homology
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BLAST of mRNA_C-linearis_contig97.17072.1 vs. uniprot
Match: D8LKZ8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKZ8_ECTSI)

HSP 1 Score: 244 bits (622), Expect = 4.560e-75
Identity = 208/355 (58.59%), Postives = 233/355 (65.63%), Query Frame = 0 
Query:    5 GAAISVHYKDRMSEITLNLAGSVAHRDQEVIALALNLQAALNLATPPVGLRLRVAPGTEAVVCPLSVLAACPAYIATTFQAGMSWFPLLEGGDDXXXXXXXXXXXXXXXXXXXXXXXXXXXRSPEPPVQDPLLPPPLGSPLEHDLCFLATGPA--ASPAEGCGRPLTAPPGDRSLGRSRPRPGRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSGSGSPAWGGSPHGFRCEDTGQQDAAVAXXXXXXXXGRRPSTAPAIGASRRRQRQPSSNLSGSHQRERGGFGERFGRGGDEDV--EMDDIGGGRTQNWPGGGAPSGVMGAAGA----GRGRTGPPSECWV 351
            GA +SV Y D   +I LNLA + A  +++   LAL LQAALNL+TPPVGLRLRVAPG +AV+CPLS + ACP+YIAT +Q GMSWFPLLEGG D                           + P PP  DPLLPPPLGSPL+H+L FLATG    ASP+EGCGRPLTAPPGDR+ G +RP PGRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHS SGSPAWG SPHGFRCE+T    A  A         RRP+TAPA+      +RQPSSNLSGS   E G FGERFGRGG  +V  E   +     +  P GG   G   A G     G    GP  ECW 
Sbjct:    6 GAVVSVQYGDCAWDIKLNLAANTACLERDTATLALELQAALNLSTPPVGLRLRVAPGAQAVICPLSAVIACPSYIATAYQ-GMSWFPLLEGGGDDHQEAPPNAPPAAPQT-----------QLPAPPSDDPLLPPPLGSPLDHELSFLATGGGFTASPSEGCGRPLTAPPGDRTRGMTRPHPGRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSHSGSPAWG-SPHGFRCEETTTTTAEDAGA-------RRPATAPAL------RRQPSSNLSGSRN-ENGVFGERFGRGGSVEVNEETGGVAAAHHRPMPDGGGLGGDGRAVGGDVDWGWCGAGPTRECWA 333
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig97.17072.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LKZ8_ECTSI4.560e-7558.59Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig97contigC-linearis_contig97:201636..203190 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig97.17072.1mRNA_C-linearis_contig97.17072.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig97 201636..203826 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig97.17072.1 ID=prot_C-linearis_contig97.17072.1|Name=mRNA_C-linearis_contig97.17072.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=352bp
MDFEGAAISVHYKDRMSEITLNLAGSVAHRDQEVIALALNLQAALNLATP
PVGLRLRVAPGTEAVVCPLSVLAACPAYIATTFQAGMSWFPLLEGGDDDE
DDNDDTENDNTPTGVAAAAAAATATRSPEPPVQDPLLPPPLGSPLEHDLC
FLATGPAASPAEGCGRPLTAPPGDRSLGRSRPRPGRREGLGRPVSATPSD
KSFGMRRFRPGKSEGFGRPVTALPSDHSGSGSPAWGGSPHGFRCEDTGQQ
DAAVAAAVAAAAAGRRPSTAPAIGASRRRQRQPSSNLSGSHQRERGGFGE
RFGRGGDEDVEMDDIGGGRTQNWPGGGAPSGVMGAAGAGRGRTGPPSECW
V*
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