prot_C-linearis_contig96.17051.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig96.17051.1
Unique Nameprot_C-linearis_contig96.17051.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length641
Homology
BLAST of mRNA_C-linearis_contig96.17051.1 vs. uniprot
Match: D7FHJ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHJ0_ECTSI)

HSP 1 Score: 530 bits (1364), Expect = 1.270e-174
Identity = 337/642 (52.49%), Postives = 416/642 (64.80%), Query Frame = 0
Query:    1 MVNVSGKEKHGSYMNHINHALRVLQYSYRLNRPVSLHEAFFPLCTHERKVFSQHFPWWKENESYEEHFFLEPFRIHADPEKMTIAMRFSLERCAEVLPTLSPTMTKIISRDNERLGPLCDGSNHTGGTAFQAKVLGLVNFIIGGDLETGRHNGMQKATKKELSLVYENGATCLQRKRTEADKEEKANGGTRGPAKKDRKGKVPFSGQTIKQTLEGMQFLFEGMYRNGMKKVLDAVDDIDETCTGKGGWCYSILESAQVASQNNSKRAKFKEEQLQGTEE-QKKKIDLVVQGLRERKITGKDFELASAAAGAFDAFSSASLRNQGFFFREALRTCVESETKSRNLGRMVAGLPGKNKNDNKGXXXXXXAAQEHVIDADCGEWYAVMMVIGRPFYRSLDDYPGEQSPYIGPLDAVGGAMPQKRFNAILGKLGRAYLGVENLTFNQLRTALCSIVIAECIKLGVRMDDPVIADFASSIITSVKMMQTRYNIHRAATTQSRAIHGKYKGQVDFKGGAYGILKGAVERELEXXXXXXXXXXXXGGGTELPQPDSDLQRMQRKLELLESENRARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEALKAKAVCWRTLFRGGRGSAAAAVRTTDHKEHTLLRRPPEKG 641
            MV +SG + HG+Y +HIN+A+++LQYSYRL RP+S +EA+ P+C  ERKV S HF  W++NE  +E F +EPFRI+ DP+KMT+AMRFSLERC EV+P + P M K++S+D+ R G L D SNHTG     AK L L+  ++  D E G        T+  L  VY      LQ KR EA +EE    G +G AKK RKG VPF+    +++ E ++FL  GMY NGMK+VLDA+D+ID  C G  GWCY IL  A+VAS +  KR  F E+QL+G +E Q+++I  VV+GL+ R I  + FELASAA G  D  S   LRNQGFFFR      V    +SRN GRMVAGLP KN     G       A+EHVID DCG WYAV  VIGR F+ S+DD  GE SPYIGP+DA GG M QKRFN I+ K+GRAYL VENLT  Q RTA C++V++    LG+ M  PVI DFAS  ++S KMM+TRY +HRA T Q+     +YKG VDF GGAY ILKGAVE E E             GG        DLQ  +R+  + E      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AL+        +FRG RGSA+AA+RT   ++   LRRPP +G
Sbjct:  273 MVRMSGDDLHGAYPSHINYAMQLLQYSYRLTRPISFYEAYLPICAGERKVLSDHFDCWRDNEKSQEDFSVEPFRINGDPKKMTVAMRFSLERCNEVIPNIPPAMVKVLSKDDGRYGTLIDKSNHTGTFTKAAKALPLLKCVMQRDPELGLEES--GPTEFALGQVYNQVGKFLQAKRNEAGEEEGRESGLKGVAKKARKGNVPFARLPYEESFELVKFLLRGMYINGMKRVLDAIDEIDGKCLGDDGWCYDILRVAEVASTSVKKRPVFTEKQLRGVDEVQRRRIAAVVEGLKSRGIRREHFELASAATGVRDMVSPHPLRNQGFFFRRWANFSVNGRRESRNPGRMVAGLPPKNNLSKHGHGSGNGVAREHVIDVDCGYWYAVTNVIGRAFFESVDDPQGELSPYIGPVDARGGVMAQKRFNGIVKKIGRAYLAVENLTIMQFRTACCTLVMSLSTALGIPMSSPVIKDFASGFLSSEKMMETRYYVHRAVTKQTGRFQLRYKGVVDFSGGAYSILKGAVEHEREMEGGSS------AGGR-------DLQLREREKAVREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHALECIG---EEVFRGERGSASAAMRTASRQQDLFLRRPPAEG 896          
BLAST of mRNA_C-linearis_contig96.17051.1 vs. uniprot
Match: D8LD08_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD08_ECTSI)

HSP 1 Score: 410 bits (1055), Expect = 2.020e-130
Identity = 223/525 (42.48%), Postives = 319/525 (60.76%), Query Frame = 0
Query:    1 MVNVSGKEKHGSYMNHINHALRVLQYSYRLNRPVSLHEAFFPLCTHERKVFSQHFPWWKENESYEEHFFLEPFRIHADPEKMTIAMRFSLERCAEVLPTLSPTMTKIISRDNERLGPLCDGSNHTGGTAFQAKVLGLVNFIIGGDLETGRHNGMQKATKKELSLVYENGATCLQRKRTEADKEEKANGGTRGPAKKDRKGKVPFSGQTIKQTLEGMQFLFEGMYRNGMKKVLDAVDDIDETCTGKGGWCYSILESAQVASQNNSKRAKFKEEQLQGTEEQKKKIDLVVQGLRERKITGKDFELASAAAGAFDAFSSASLRNQGFFFREALRTCVESETKSRNLGRMVAGLPGKNKNDNKGXXXXXXAAQEHVIDADCGEWYAVMMVIGRPFYRSLDDYPGEQSPYIGPLDAVGGAMPQKRFNAILGKLGRAYLGVENLTFNQLRTALCSIVIAECIKLGVRMDDPVIADFASSIITSVKMMQTRYNIHRAATTQSRAIHGKYKGQVDFKGGAYGILKGAVERELE 525
            MV   G+  HG+Y +HINH + +LQY+YRLNRP+SLHE + PLC  ER+V  +HF  W +NE  ++ + +     +   +K T AMRFSLE   EVLP + PTM  ++SRD ++ G   D S++    +  AK   ++  ++  +    +  G Q  T   +  +Y      L  KR +A   E    G  G A K +KG+VP    + +  L  ++ LF+G+Y NGMK ++DA+ +ID TC GKGGWCY IL +A+  + N  K+A    EQL+G  +Q+  +  +V+ L+E+ +T K FELAS  A   D F+S  LRNQGF++R A    V  + +S+N GR+VA LPGK+K    G      AAQEHVID D G+WYA+  V+GR F+RS        S +IGP+D  G  M  +RF  IL K+G+AYL  EN++   +RT + ++V+AEC  LG+RMDDP+I DFASSI++S   MQ  Y+ HRA   QSR +   Y+G +DF GGAYG+++G+ +R LE
Sbjct:  103 MVARKGESVHGAYPSHINHVVHLLQYTYRLNRPISLHEGYHPLCAAEREVLREHFGCWDDNEDDQDDYTISLVSTNFSGDK-TFAMRFSLESSNEVLPVMPPTMIGVLSRDPDKYGTKLDTSSYVDTFSKVAKAFDVLKIVMDQNAVDNQGGGGQ--TDAAIERMYAQIKYLLHDKRLQAGALEGKISGLTGVATKTKKGRVPLVTFSNEHNLRALKLLFKGLYVNGMKPLMDAIAEIDATCAGKGGWCYDILRAAEFPATNTKKKAVVTVEQLEGNAKQRLLVMKMVEALKEKGVTRKHFELASVCASVRDVFTSYPLRNQGFYYRRATHLHVNGQNESKNPGRVVARLPGKSKVSKHGNGSGDGAAQEHVIDVDTGDWYAIPNVVGRAFHRSFSGDNSIASQFIGPMDKKGNDMKPERFKGILKKIGQAYLSSENMSVTSMRTVVVTLVMAECTALGIRMDDPIIKDFASSILSST--MQKHYDAHRATIRQSRRVQRGYEGTIDFSGGAYGVVEGSEKRRLE 622          
BLAST of mRNA_C-linearis_contig96.17051.1 vs. uniprot
Match: A0A6H5JK98_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK98_9PHAE)

HSP 1 Score: 177 bits (449), Expect = 4.910e-43
Identity = 141/496 (28.43%), Postives = 226/496 (45.56%), Query Frame = 0
Query:    6 GKEKHGSYMNHINHALRVLQYSYRLNRPVSLHEAFFPLCTHERKVFSQHFPWWKENESYEEHFFLEPFRIHADPEKMTIAMRFSLERCAEVLPTLSPTMTKIISRDNERLGPLCDGSNHTGGTAFQAKVLGLVNFIIGGDLETGRHNGMQKATKKELSLVYENGATCLQRKRTEADKEEKANGGTRGPAKKDRKGKVPFSGQTIKQTLEGMQFLFEGMYRNGMKKVLDAVDDIDETCTGKGGWCYSILESAQVASQNNSKRAKFKEEQLQGTE-EQKKKIDLVVQGLRERKITGKDFELASAAAGAFDAFSSASLRNQGFFFREALRTCVESETK---------SRNLGRMVAGLPGKNKNDNKGXXXXXXAAQEHVIDADCGEWYAVMMVIGRPFYRS----LDDYPGEQSPYIGPLDAVGGAMPQK-RFNAILGKLGRAYLGVENLTFNQLRTALCSIVIAECIKLGVRMDDPVIADFASSIITSVKMMQTRYN 486
            G +  G +   INH LRV QY+YRL RP S+HE + PLC  E    S+ F  W+E++        +     +  E M+ A RF++ R + + P L P   +I SRD E+ G + D S H        K   ++ +I+      G  + M K     +++     +T    +  + D ++   G ++G +   +KGK+P       ++ E ++ + E + +NG   +   +D ID    GK GWC+ I+      + + S           G   ++KK+ID +V+ L++  +  +DFE A  A     A++ A LR+Q   F +     + SE K          RN+ R+    PGK K             +E V D  C EW  V++VIG  FY      L+D  G        +    G M  K  F+ ++ K+G  +LGVENLT + LRT + S+ +      G  ++D  +   A S+ T VKM+   YN
Sbjct:  392 GMKPTGDFKAVINHMLRVQQYAYRLGRPASIHEGYHPLCDKEVTALSKFFRGWEEDDDDSG----QCLGTSSTSENMSWATRFAVRRSSMIYPDLFPASLEIESRDTEKHGSVVDSSKHVNVYTKTRKAKHVIKWIL---QNGGVCDNMDKKIDTAVAIFELTKSTVTDARAKKKDYDDTTTG-SQGDSNTLKKGKLPLLLLDPLKSEECLRLMTEALTKNGWGYLRGQIDLIDPMAWGKNGWCWEIVVDGFKDATDKSNPPATGHAHFGGRNGKEKKRIDRMVEKLKDAGVELRDFEAAWGATSVLSAYNGACLRDQFHRFLKKRTAHIRSENKVTGRRGLGDGRNVDRVTMWPPGKGKTGK---------CKERVFDPLCSEWLTVLLVIGWAFYDKEGVVLEDEMG--------IPNSNGKMKLKGSFDVVMKKVGSTFLGVENLTLHNLRTVVSSLAVKYFYGKGYNLNDAPLLQLAESMDTGVKMLVGPYN 862          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig96.17051.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FHJ0_ECTSI1.270e-17452.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LD08_ECTSI2.020e-13042.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JK98_9PHAE4.910e-4328.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 550..593

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig96contigC-linearis_contig96:536654..539256 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig96.17051.1mRNA_C-linearis_contig96.17051.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig96 535823..539256 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig96.17051.1 ID=prot_C-linearis_contig96.17051.1|Name=mRNA_C-linearis_contig96.17051.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=641bp
MVNVSGKEKHGSYMNHINHALRVLQYSYRLNRPVSLHEAFFPLCTHERKV
FSQHFPWWKENESYEEHFFLEPFRIHADPEKMTIAMRFSLERCAEVLPTL
SPTMTKIISRDNERLGPLCDGSNHTGGTAFQAKVLGLVNFIIGGDLETGR
HNGMQKATKKELSLVYENGATCLQRKRTEADKEEKANGGTRGPAKKDRKG
KVPFSGQTIKQTLEGMQFLFEGMYRNGMKKVLDAVDDIDETCTGKGGWCY
SILESAQVASQNNSKRAKFKEEQLQGTEEQKKKIDLVVQGLRERKITGKD
FELASAAAGAFDAFSSASLRNQGFFFREALRTCVESETKSRNLGRMVAGL
PGKNKNDNKGGGGGGGAAQEHVIDADCGEWYAVMMVIGRPFYRSLDDYPG
EQSPYIGPLDAVGGAMPQKRFNAILGKLGRAYLGVENLTFNQLRTALCSI
VIAECIKLGVRMDDPVIADFASSIITSVKMMQTRYNIHRAATTQSRAIHG
KYKGQVDFKGGAYGILKGAVERELEMEGGGAGAGANQGGGTELPQPDSDL
QRMQRKLELLESENRARERAVQIAEHENKAREHAVQIMERENKAREHAEA
LKAKAVCWRTLFRGGRGSAAAAVRTTDHKEHTLLRRPPEKG
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