prot_C-linearis_contig95.16999.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig95.16999.1
Unique Nameprot_C-linearis_contig95.16999.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length323
Homology
BLAST of mRNA_C-linearis_contig95.16999.1 vs. uniprot
Match: D7G7M8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7M8_ECTSI)

HSP 1 Score: 320 bits (821), Expect = 7.670e-106
Identity = 179/324 (55.25%), Postives = 231/324 (71.30%), Query Frame = 0
Query:    1 MDQPLTSSDHLSGGAAGAAEAGVRAQEGEEGKGINSRRFFLFGF-GGSDSSSSPEQESPAARCGLVTVVETIGQDLRMVVWHGSTLTLLYLVVGGCWLMISDGWSFSDTFYFMTTSLLTIGYGDIVVSTKGLDRLLDSLIILVGLVAVTIWATCASRAARTIRARPVGGLAVPVPDFDAEAAIHRCRWMLARRVVSLSVVLVAGVFAFMVGEGANFITSFYWAIVTASSIGYGDVVPSSAPMRWFTTLETLIIVATGTMLETLRFVGDYPFKISTFRAEGKVYEQFTKARSASERAAAATVVDNAVTELLGIPPEDRPGGAISR 323
            M++PLTSSDHL     GA  A  R  E        SR + LF F  G  ++ SPE +S A+R GL+ V E   +DL  VV +G  +TLLYL++GG WLMISD WSF++T YFMTTS+LTIGYGD+VV  +G DR LDSL+I++GL ++TIWA CAS+   ++R+R V G   PV +FDAE +I + RW L  R+V L VV V GV AFM+GEGA F TSFYW IVT+S+IGYGDVVP+S  M+WFT+  +  I ATG MLETLRF G +PF + T RAE KV+ QF+++ +A+ RAAAA++ + A+TELLGIPPE+RPGG + R
Sbjct:    1 MEEPLTSSDHLRSSEGGAEGAAWRPAE-------ESRGWRLFPFCRGGRTTVSPEHDSLASRYGLLDVAEIRSKDLMTVVVNGIGMTLLYLLLGGLWLMISDAWSFTETVYFMTTSMLTIGYGDVVV--QGADRFLDSLLIVLGLFSITIWAACASQWLSSVRSRRVEGHG-PVAEFDAELSIRKYRWKLIHRLVILLVVFVVGVVAFMLGEGAPFTTSFYWVIVTSSTIGYGDVVPTSPAMKWFTSFYS--IAATGAMLETLRFAGTFPFTVWTLRAEAKVFGQFSRSDTAAGRAAAASLAECAITELLGIPPEERPGGVVGR 312          
BLAST of mRNA_C-linearis_contig95.16999.1 vs. uniprot
Match: A0A6H5L7J9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7J9_9PHAE)

HSP 1 Score: 315 bits (808), Expect = 4.480e-103
Identity = 177/323 (54.80%), Postives = 230/323 (71.21%), Query Frame = 0
Query:    1 MDQPLTSSDHLSGGAAGAAEAGVRAQEGEEGKGINSRRFFLFGFGGSDSSSSPEQESPAARCGLVTVVETIGQDLRMVVWHGSTLTLLYLVVGGCWLMISDGWSFSDTFYFMTTSLLTIGYGDIVVSTKGLDRLLDSLIILVGLVAVTIWATCASRAARTIRARPVGGLAVPVPDFDAEAAIHRCRWMLARRVVSLSVVLVAGVFAFMVGEGANFITSFYWAIVTASSIGYGDVVPSSAPMRWFTTLETLIIVATGTMLETLRFVGDYPFKISTFRAEGKVYEQFTKARSASERAAAATVVDNAVTELLGIPPEDRPGGAISR 323
            M++PL SSD L     GA   GV  Q  EE +G    R+F F  GG  ++ SP Q+S A+R GL+ V E   +DL  VV +G  +TLLYL++G  WLMISD WSF+DT YFM+TS+LTIGYGD+VV+ +G DRLLDS++I +GL ++TIWA CAS+   + R+R V G   PV +FDAE +I + RW L  R+V L VV+V GV AFM+GEG +F TSFYW IVT+S+IGYGDVVP+S  M+WFT+  +  I ATG MLE LRF G +PF + T RAE KV+ QF++  +A+  AAAA++ D+AVTELLGIPPE+RPGG + R
Sbjct:    1 MEEPLASSDRLRSSERGAE--GVAWQPAEESRGW---RWFPFCRGGR-TTVSPTQDSLASRYGLLDVAEIRSKDLMTVVVNGIIMTLLYLLLGALWLMISDSWSFTDTVYFMSTSMLTIGYGDVVVNERGTDRLLDSVLIALGLFSITIWAACASQWLSSARSRRVEGHG-PVAEFDAELSIRKYRWKLIHRLVVLLVVIVIGVVAFMLGEGTSFPTSFYWVIVTSSTIGYGDVVPTSPAMKWFTSFYS--IAATGAMLEALRFAGTFPFTVWTLRAEAKVFGQFSRRNTAAGGAAAASLADSAVTELLGIPPEERPGGVLGR 314          
BLAST of mRNA_C-linearis_contig95.16999.1 vs. uniprot
Match: A0A7S3B5W2_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3B5W2_9EUKA)

HSP 1 Score: 81.3 bits (199), Expect = 1.220e-13
Identity = 52/160 (32.50%), Postives = 81/160 (50.62%), Query Frame = 0
Query:   85 LTLLYLVVGGCWLMISDGWSFSDTFYFMTTSLLTIGYGDIVVSTKGLDRLLDSLIILVGLVAVTIWATCASRAARTIRARPVGGLAVPVPDFDAEAAIHRCRWMLARRVVSLSVVLVAGVFAFMVGEGANFITSFYWAIVTASSIGYGDVVPSSAPMRWF 244
            + L +L +G C+ M ++ W F D+ YF   +L T+GYGD+  S+  + ++     IL+GL   +I ATC       ++A+     A  V              ++ + V  L V  + G    MV EG   + S YWA+VTASS+GYGD+V  + P  +F
Sbjct:   36 IILSHLAIGTCFYMFAEEWEFRDSLYFCVVTLTTVGYGDMAPSSD-ISKVFTIFYILLGL---SIVATCLGLLVGRVQAKIEACHAQEVSKLG----------LMLKMVGILVVTTLVGAAYVMVAEGWGVLDSVYWAVVTASSVGYGDIVSGNGPTHYF 181          
BLAST of mRNA_C-linearis_contig95.16999.1 vs. uniprot
Match: A0A7S3UR31_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UR31_HETAK)

HSP 1 Score: 79.7 bits (195), Expect = 4.830e-13
Identity = 57/230 (24.78%), Postives = 106/230 (46.09%), Query Frame = 0
Query:   73 QDLRMVVWHGSTLTLLYLVVGGCWLMISDGWSFSDTFYFMTTSLLTIGYGDIVVSTKGLDRLLDSLIIL--VGLVAVTIWATCASRAA----------RTIRARPVGGLAVPVPDFDAEAAIHRCRWMLARRVVSLS-----VVLVAGVFAFMVGEGANFITSFYWAIVTASSIGYGDVVPSSAPMRWFTTLETLIIVATGTMLETLRFVGDYPFKISTFRAEGKVYEQF 285
            Q +R      +    +Y+++G       +GW F++  YF   + L+IGYGD+ + T+G + +     +L   G +   I    A+  +          +T      GG        +A   +H+     AR+ + LS     +V++ G     + E   ++ SFYW+ VT ++ GYGD VP++  ++WFTT  +LI V +  +   + ++  +P       AE ++ +QF
Sbjct:   58 QTVRRTTAAVTLFFFVYVLIGILVYDSIEGWGFTNAVYFTVNTFLSIGYGDMTI-TRGSEMMFTGFFVLCGAGFIGSAIGVVVANETSTRDEDLHKYRQTKEFHENGG--------EANFQVHKWERQYARKNLLLSFFVILLVVLVGTLVMGIFEDWTYVESFYWSTVTITTTGYGDYVPTTIALKWFTTFYSLIGVIS--LARAMSYIAQFPILARRIEAERRILKQF 276          
BLAST of mRNA_C-linearis_contig95.16999.1 vs. uniprot
Match: A0A7S2HDP2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HDP2_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 1.030e-7
Identity = 49/227 (21.59%), Postives = 105/227 (46.26%), Query Frame = 0
Query:   85 LTLLYLVVGGCWLMISDGWSFSDTFYFMTTSLLTIGYGDIVVSTKGLDRLLDSLIILVGLVAV--------------------------TIWATCASRAARTIRARPVGGLAVPVPDFDAEAAIHRCRWMLARRVVSLSVVLVAGVFAFMVGEGANFITSFYWAIVTASSIGYGDVVPSSAPMRWFTTLETLIIVATGTMLETLRFVGDYPFKISTFRAEGKVYEQF 285
            + +LYL +G    M  + W+F++T Y++ ++L T+GYGDIV ++  + R+  +L + +G+  +                          T+  + + + + +       G+ +P+  +  E +  R + +    ++ L+ +LV G     + E      +FYW+ VT +++G+GDV P++   +WF+     +I  T  +  ++ F+   P  +   R    V  Q+
Sbjct:   20 MLILYLFIGLIIGMKLEKWNFTNTMYYIVSTLTTVGYGDIVSNSTPVSRISTALFVFIGVSFIGFAFGVVVSQLLDSADVDLDPPNQNLTLQQSMSDKGSMSFC-----GMRIPMVFYSYELSTMRKK-LFDSWILVLATLLV-GTLCMSILEDWPIDRAFYWSCVTVTTVGFGDVTPTNDITKWFSI--GYMIFGTVCVARSVTFIASIPLTLRKLRMRQDVMSQW 237          
BLAST of mRNA_C-linearis_contig95.16999.1 vs. uniprot
Match: A0A7S3P1Y1_9STRA (Hypothetical protein n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P1Y1_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 3.150e-6
Identity = 58/175 (33.14%), Postives = 82/175 (46.86%), Query Frame = 0
Query:  102 GWSFSDTFYFMTTSLLTIGYGDIVVSTKGLDRLLDSLIILVG--------LVAVTIWATCASRAARTIRAR-PVGG-------------LAVPVPDFDAEAAIHRCRWMLARRVVS-LSVVLVAGVFA--FMV-------GEGANFITSFYWAIVTASSIGYGDVVPSSAPMRWF 244
            GW+     YF +T++ T+GYGD+VV  K  D L D    L G        LVA+      A  + R +  R PV               +  P PD      I R R+ L  ++V+  S++ + G+F   F V       GE  N++TSFYWAI T ++IGYGD+      +RWF
Sbjct:  287 GWT--SALYFASTTMSTVGYGDLVVE-KTDDNLTDWRSSLYGVAYMMTSLLVAIMFLRAVADMSFRKLTQRGPVRDVMERAFQTLTHWVMGRPRPDDHLYVQIRRLRFQLLSKIVAQFSLLNLIGIFVSRFFVNRYADETGENWNWMTSFYWAIQTTTTIGYGDL-NMPFELRWF 457          
BLAST of mRNA_C-linearis_contig95.16999.1 vs. uniprot
Match: A0A482S490_9ARCH (Two pore domain potassium channel family protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S490_9ARCH)

HSP 1 Score: 57.4 bits (137), Expect = 9.630e-6
Identity = 35/92 (38.04%), Postives = 49/92 (53.26%), Query Frame = 0
Query:  196 LSVVLVAGVFAFMVGEGANFITSFYWAIVTASSIGYGDVVPSSAPMRWFTTLETLIIVATGTMLETLRFVGDYPFKISTFRAEGKVYEQFTK 287
            LS+ + +G       EG  F  +FYWA VTA++IGYGDV P+SA  + FT     +I AT    +  R +  YP  +    +E  V  QFT+
Sbjct:  162 LSISIFSGAACMCAIEGWTFQDAFYWACVTATTIGYGDVTPTSAAGKIFTIFY--VIFATALAAKGFRDLVCYPMLVRQKESEAYVLSQFTE 251          
BLAST of mRNA_C-linearis_contig95.16999.1 vs. uniprot
Match: A0A3E0PWI9_9ACTN (Two pore domain potassium channel family protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A3E0PWI9_9ACTN)

HSP 1 Score: 53.5 bits (127), Expect = 1.110e-5
Identity = 26/73 (35.62%), Postives = 46/73 (63.01%), Query Frame = 0
Query:  193 VVSLSVVLVAGVFAFMVGEGANFITSFYWAIVTASSIGYGDVVPSSAPMRWFTTLETLIIVATGTMLETLRFV 265
            ++++S V   G   + + EG +++ SFY+ +VT +++GYGD+ P+SAP + FT    LI+   G +L  L F+
Sbjct:   11 LIAVSGVFATGTVFYRIVEGWSWVDSFYFTVVTLTTVGYGDLAPTSAPSKLFTAF--LILTGVGAILAFLDFL 81          
BLAST of mRNA_C-linearis_contig95.16999.1 vs. uniprot
Match: A0A5N5LJG4_9PEZI (Uncharacterized protein n=1 Tax=Coniochaeta sp. 2T2.1 TaxID=1571157 RepID=A0A5N5LJG4_9PEZI)

HSP 1 Score: 57.8 bits (138), Expect = 1.300e-5
Identity = 61/209 (29.19%), Postives = 95/209 (45.45%), Query Frame = 0
Query:   83 STLTLLYLVVGGCWLMISDGWSFSDTFYFMTTSLLTIGYGDIVVSTKGLDRLLDSLIIL----VGLVAVTIWATCASRAARTIRARPVGGL-----------AVPVPD-------FDAEAAIH-----RCRW-MLARRVVSLSVVLVAGVFAFMVGE----GANFITSFYWAIVTASSIGYGDVVPSSAPMRWFTTLETLIIVATGTML 259
            S   L ++ +G       +GW + D+ Y+   +LLTIG+GDI   T     LL    IL    +G+   +I      R    +R R +G +           A+ + D       F A  AI      R RW MLA  V +  ++L  G   F+  E    G ++  + Y A V+ ++IGYGD+ P+S+  R F  L +L+ V T T++
Sbjct:  160 SVCFLTFVFLGALVFSHIEGWQYQDSVYWADVTLLTIGFGDIAPETPLGRALLFPYAILGITCLGITLASIRRLVLDRGELALRRRRLGKMRDELLKRSPQRAISLCDRERLTLVFAATRAIQSKASRRWRWTMLAMSVGAWLLLLFGGAAVFLRCEKEYQGWSYFNALYMAFVSLTTIGYGDLAPTSSCGRSFFVLWSLLGVPTITIV 368          
BLAST of mRNA_C-linearis_contig95.16999.1 vs. uniprot
Match: A0A482S9V1_9ARCH (Two pore domain potassium channel family protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S9V1_9ARCH)

HSP 1 Score: 57.0 bits (136), Expect = 2.240e-5
Identity = 47/165 (28.48%), Postives = 74/165 (44.85%), Query Frame = 0
Query:   88 LYLVVGGCWLMISDGWSFSDTFYFMTTSLLTIGYGDIVVSTKGLDRLLDSLIILVGLVAVT-IWATCASRAARTIRARPVGGLAVPVPDFDAEAAIHRCRWMLARRVVSLSVVLVAGVFAFMVGEGANFITSFYWAIVTASSIGYGDVVPSSAPMRWFTTLETLI 251
            +Y +VG   +   +GW   D   F+T +L TIGYG +  +T    R+  S  I +G++ +  I A       R +R R      +        A ++   W+L          L+ G   F   EG  F  +FY+A VT +++GYGD+  S    +WF  +  LI
Sbjct:  112 IYYLVGCLVMNYYEGWGLLDCLSFITQTLTTIGYGYLHPTTSS-ARIFVSFYIFIGVLMIFGIMADITYSIVRFVRKRYHKPAKLNKLQVIVRAVLNCIMWVLITFAT-----LLFGAAMFAATEGWAFDKAFYFAAVTITTVGYGDLHVSQPSTKWFNLVYMLI 270          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig95.16999.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
D7G7M8_ECTSI7.670e-10655.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L7J9_9PHAE4.480e-10354.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3B5W2_9EUKA1.220e-1332.50Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A7S3UR31_HETAK4.830e-1324.78Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2HDP2_9STRA1.030e-721.59Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S3P1Y1_9STRA3.150e-633.14Hypothetical protein n=2 Tax=Amphora coffeiformis ... [more]
A0A482S490_9ARCH9.630e-638.04Two pore domain potassium channel family protein n... [more]
A0A3E0PWI9_9ACTN1.110e-535.62Two pore domain potassium channel family protein n... [more]
A0A5N5LJG4_9PEZI1.300e-529.19Uncharacterized protein n=1 Tax=Coniochaeta sp. 2T... [more]
A0A482S9V1_9ARCH2.240e-528.48Two pore domain potassium channel family protein n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.287.70coord: 56..166
e-value: 5.6E-15
score: 57.2
NoneNo IPR availableGENE3D1.10.287.70coord: 181..300
e-value: 3.3E-14
score: 54.8
NoneNo IPR availablePANTHERPTHR11003:SF267OPEN RECTIFIER POTASSIUM CHANNEL PROTEIN 1coord: 84..157
NoneNo IPR availablePANTHERPTHR11003:SF267OPEN RECTIFIER POTASSIUM CHANNEL PROTEIN 1coord: 198..261
NoneNo IPR availablePANTHERPTHR11003POTASSIUM CHANNEL, SUBFAMILY Kcoord: 198..261
coord: 84..157
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 109..128
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 98..108
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 155..192
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 224..242
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 78..97
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 267..323
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 129..133
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 193..223
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 243..266
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..77
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 134..154
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 177..256
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 78..153
NoneNo IPR availableTMHMMTMhelixcoord: 78..100
NoneNo IPR availableTMHMMTMhelixcoord: 193..224
NoneNo IPR availableTMHMMTMhelixcoord: 137..154
NoneNo IPR availableTMHMMTMhelixcoord: 244..266
IPR013099Potassium channel domainPFAMPF07885Ion_trans_2coord: 196..256
e-value: 6.7E-12
score: 45.2
coord: 85..155
e-value: 2.4E-12
score: 46.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig95contigC-linearis_contig95:472396..476425 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig95.16999.1mRNA_C-linearis_contig95.16999.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig95 472396..476425 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig95.16999.1 ID=prot_C-linearis_contig95.16999.1|Name=mRNA_C-linearis_contig95.16999.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=323bp
MDQPLTSSDHLSGGAAGAAEAGVRAQEGEEGKGINSRRFFLFGFGGSDSS
SSPEQESPAARCGLVTVVETIGQDLRMVVWHGSTLTLLYLVVGGCWLMIS
DGWSFSDTFYFMTTSLLTIGYGDIVVSTKGLDRLLDSLIILVGLVAVTIW
ATCASRAARTIRARPVGGLAVPVPDFDAEAAIHRCRWMLARRVVSLSVVL
VAGVFAFMVGEGANFITSFYWAIVTASSIGYGDVVPSSAPMRWFTTLETL
IIVATGTMLETLRFVGDYPFKISTFRAEGKVYEQFTKARSASERAAAATV
VDNAVTELLGIPPEDRPGGAISR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013099K_chnl_dom