mRNA_C-linearis_contig92.16861.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig92.16861.1
Unique NamemRNA_C-linearis_contig92.16861.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig92.16861.1 vs. uniprot
Match: D8LFG1_ECTSI (Serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFG1_ECTSI)

HSP 1 Score: 274 bits (700), Expect = 5.520e-88
Identity = 152/218 (69.72%), Postives = 167/218 (76.61%), Query Frame = 1
Query:  121 NGMRCFSYNALYGATNRFSADRVLGSGGYGKVYAGELRTSLLGIAGLESTTK-VAIKMLDPTSSQGEDYFQAEVTSPPRLRHANIVPLYGICAERSGLVCPRLSSSVFDKFKTADSWSKLPGKARVQIVIDVAAGLEYLHSEGFVHRDIKPGNIILDIEGLAHLTDFGLARRMNTECTNTNPVETFGFMDPEYQDTEVLTKVSDIFSLGSVLACLLTG 771
            NG+RCFSYNALY AT+RFSAD VLGSGGYG+V+AG LRTSLLGIAGLESTTK VAIKMLDP S QGED+FQAE T+    R                  C    S++    +TADS S LP KARV+IVID AAGLEYLHSEGFVHRDIKPGNI+LD EGLAHLTDFGLAR+M+ E TNTNPV T GFMDPEY +TE LTK SDI+SLG VLACLL G
Sbjct:    3 NGVRCFSYNALYHATSRFSADGVLGSGGYGRVHAGVLRTSLLGIAGLESTTKEVAIKMLDPESLQGEDHFQAESTAGWSTRG-----------------CQAACSTL----RTADSRSMLPWKARVKIVIDGAAGLEYLHSEGFVHRDIKPGNILLDDEGLAHLTDFGLARKMDNEGTNTNPVGTIGFMDPEYLETETLTKASDIYSLGCVLACLLMG 199          
BLAST of mRNA_C-linearis_contig92.16861.1 vs. uniprot
Match: S8E3Z9_9LAMI (Uncharacterized protein n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8E3Z9_9LAMI)

HSP 1 Score: 150 bits (379), Expect = 6.940e-38
Identity = 96/228 (42.11%), Postives = 126/228 (55.26%), Query Frame = 1
Query:  130 RCFSYNALYGATNRFSADRVLGSGGYGKVYAGELRTSLLGIAGLESTTKVAIKMLDPTSSQGEDYFQAEVTSPPRLRHANIVPLYGICAERSGLVCPRL-SSSVFDKFKTADSWSKLPGKARVQIVIDVAAGLEYLHS---EGFVHRDIKPGNIILDIEGLAHLTDFGLARRM---------NTECTNT-NPVETFGFMDPEYQDTEVLTKVSDIFSLGSVLACLLTG 771
            R FS+  L  AT  FS    +G GGYG +Y G LR            T+VAIKML+P SSQG   F  EV    ++RH NIV L G C E   LV   + + S+ D+    ++   L  KAR++I  ++ + L +LHS   +G VH D+KPGNI+LD   +  L+DFG+ R +          T C  T NPV TFG+MDPE+  T  LT  SD+FS G +L  LLTG
Sbjct:  326 REFSFAELEEATLGFSPKLKIGEGGYGSIYRGNLRH-----------TQVAIKMLNPYSSQGPREFHQEVNILSKVRHPNIVTLMGACLEAWTLVYEYIPNGSLEDRLTCKNNTPPLSWKARIRIATELCSALVFLHSFRPQGIVHGDLKPGNILLDANYVCKLSDFGICRELPPDEFSQYDETRCFRTENPVGTFGYMDPEFLMTGELTSKSDVFSFGVILLRLLTG 542          
BLAST of mRNA_C-linearis_contig92.16861.1 vs. uniprot
Match: UPI001CF9D298 (leucine-rich repeat receptor protein kinase HPCA1-like n=1 Tax=Mangifera indica TaxID=29780 RepID=UPI001CF9D298)

HSP 1 Score: 142 bits (359), Expect = 5.610e-35
Identity = 90/225 (40.00%), Postives = 125/225 (55.56%), Query Frame = 1
Query:  121 NGMRCFSYNALYGATNRFSADRVLGSGGYGKVYAGELRTSLLGIAGLESTTKVAIKMLDPTSSQGEDYFQAEVTSPPRLRHANIVPLYGICAERSG--LVCPRLSSSVFDKFKTADSWSKLPGKARVQIVIDVAAGLEYLH---SEGFVHRDIKPGNIILDIEGLAHLTDFGLARRMNTECTN---TNPVETFGFMDPEYQDTEVLTKVSDIFSLGSVLACLLTG 771
            NG+RCFS+  L   TN FS   +LGSGGYG+VY G L T L+          VAIK     S QG + F++E+    RL H N++ L G C E+    LV   + +       +  S  +L    R++I +D A GL YLH   +   +HRDIK  NI+LD   +A + DFGL++ ++    N   T+   T G++DPEY  T  LTK SD++SLG V+A L+TG
Sbjct:  590 NGVRCFSFEELKKCTNNFSNTNILGSGGYGQVYKGRLETGLI----------VAIKRAKQGSLQGLNEFKSEIELLSRLHHRNVLSLVGFCYEQGEQMLVYEFIQNGTLKDSLSGKSGIQLSWIWRLRIALDAARGLAYLHELANPTIIHRDIKSNNILLDDHLIAKVADFGLSKTLDGSEKNQIITDVKGTPGYLDPEYFKTLQLTKKSDVYSLGVVMAELITG 804          
BLAST of mRNA_C-linearis_contig92.16861.1 vs. uniprot
Match: A0A2P5D473_PARAD (GPCR kinase n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5D473_PARAD)

HSP 1 Score: 140 bits (353), Expect = 3.550e-34
Identity = 87/225 (38.67%), Postives = 122/225 (54.22%), Query Frame = 1
Query:  136 FSYNALYGATNRFSADRVLGSGGYGKVYAGELRTSLLGIAGLESTTKVAIKMLDPTSSQGEDYFQAEVTSPPRLRHANIVPLYGICAERSGLVCPRL-SSSVFDKFKTADSWSKLPGKARVQIVIDVAAGLEYLHSE---GFVHRDIKPGNIILDIEGLAHLTDFGLARRMN---------TECTNTNPVETFGFMDPEYQDTEVLTKVSDIFSLGSVLACLLTG 771
            FS++ +  +TN+F     +G GGYG +Y G LR +L           VAIKML   S QG   FQ EV    +LRH N+V L G C E   LV   L + S+ D+    D+ S L  + R++I  ++ + L +LHS      VH D+KP NI+LD   ++ L+DFG+ R ++         T C  T+P  TF +MDPE+  T  LT  SD++S G +L  LLTG
Sbjct:  525 FSFSEIEESTNKFDQSLKIGEGGYGSIYKGLLRHTL-----------VAIKMLHAHSMQGPSEFQQEVDVLSKLRHPNLVTLIGACPEAWALVYEYLPNGSLDDRLCCKDNTSPLSWQTRIRIATELCSVLIFLHSSKPHSIVHGDLKPANILLDANFVSKLSDFGICRLLSHGESSSNNTTLCCRTDPKGTFAYMDPEFLSTGELTSKSDVYSFGIILLRLLTG 738          
BLAST of mRNA_C-linearis_contig92.16861.1 vs. uniprot
Match: A0A834LKX6_RHOSS (Protein kinase domain-containing protein n=1 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834LKX6_RHOSS)

HSP 1 Score: 138 bits (348), Expect = 3.900e-34
Identity = 84/221 (38.01%), Postives = 119/221 (53.85%), Query Frame = 1
Query:  136 FSYNALYGATNRFSADRVLGSGGYGKVYAGELRTSLLGIAGLESTTKVAIKMLDPTSSQGEDYFQAEVTSPPRLRHANIVPLYGICAERSGLVCPRL-SSSVFDKFKTADSWSKLPGKARVQIVIDVAAGLEYLHSEGFVHRDIKPGNIILDIEGLAHLTDFGLARRMNTECTNTN--------PVETFGFMDPEYQDTEVLTKVSDIFSLGSVLACLLTG 771
            F  + + GATN F     +G GGYG VY G LR            T VA+K L   S QG   FQ EV    +LRH N+V L G C +   +V   L + S+ D+    D+ + L  K R++I  ++ + L +LHS+G VH D+KP NI+LD   +  L+D G+ R +N    ++N        P  TFG++DP++ +T  LT  SDI+S G +L  LLTG
Sbjct:  102 FPLHEIEGATNNFHLSMKIGQGGYGPVYKGFLRH-----------THVAVKTLISQSMQGRSEFQQEVHFLGKLRHPNLVTLIGSCPDACIIVYEYLPNGSLEDRLSCRDNSTPLSWKTRIRIAAELCSVLIFLHSDGLVHGDLKPDNILLDANYVCKLSDLGICRLVNRNAESSNTRGCYVTVPKGTFGYIDPDFAETGELTLKSDIYSFGVILLQLLTG 311          
BLAST of mRNA_C-linearis_contig92.16861.1 vs. uniprot
Match: A0A2K3NRQ8_TRIPR (Leucine-rich repeat receptor-like protein kinase at2g19210-like protein n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3NRQ8_TRIPR)

HSP 1 Score: 137 bits (344), Expect = 4.700e-34
Identity = 83/222 (37.39%), Postives = 120/222 (54.05%), Query Frame = 1
Query:  130 RCFSYNALYGATNRFSADRVLGSGGYGKVYAGELRTSLLGIAGLESTTKVAIKMLDPTSSQGEDYFQAEVTSPPRLRHANIVPLYGIC--AERSGLVCPRLSSSVFDKFKTADSWSKLPGKARVQIVIDVAAGLEYLHS---EGFVHRDIKPGNIILDIEGLAHLTDFGLARRM---NTECTNTNPVETFGFMDPEYQDTEVLTKVSDIFSLGSVLACLLTG 771
            + FSY  +   T+ F    ++G GG+GKVY G L          +  TKVA+K+L P+S QG   FQ+E      + H N+V L G C   E   L+   +++    +  + ++   L   AR++I +D A GLEYLH+      +HRD+KP NI+LD    A + DFGL+R     N    +T P  TFG++DPEYQ T    K +DI+S G +L  L+TG
Sbjct:  127 QAFSYTEILNITDNFKT--IIGEGGFGKVYVGIL----------QDHTKVAVKLLSPSSMQGYKEFQSEAQLLTVVHHRNLVSLVGYCDQGEIKALIYEYMANGNLQQLLSEENQDILSWNARLKIAVDAAHGLEYLHNGCKPPIMHRDLKPSNILLDENLQAKIADFGLSRAFGNDNDSHISTCPAGTFGYIDPEYQRTGNTNKKNDIYSFGIILFVLITG 336          
BLAST of mRNA_C-linearis_contig92.16861.1 vs. uniprot
Match: A0A6I9SSE1_SESIN (receptor-like protein kinase FERONIA n=1 Tax=Sesamum indicum TaxID=4182 RepID=A0A6I9SSE1_SESIN)

HSP 1 Score: 140 bits (352), Expect = 5.140e-34
Identity = 88/224 (39.29%), Postives = 125/224 (55.80%), Query Frame = 1
Query:  124 GMRCFSYNALYGATNRFSADRVLGSGGYGKVYAGELRTSLLGIAGLESTTKVAIKMLDPTSSQGEDYFQAEVTSPPRLRHANIVPLYGICAERSGLVCPR----LSSSVFDKFKTADSWSKLPGKARVQIVIDVAAGLEYLHSEGFVHRDIKPGNIILDIEGLAHLTDFGLARRMNT----ECTNTNPVETFGFMDPEYQDTEVLTKVSDIFSLGSVLACLLTG 771
            G+RCFS + +  AT+ FS   + G G +GKVY G +          +   KVAIK L   S QGE+ F  EV +  +LRHAN+V L G C ER  ++       L +   + FK   + + L  + R++I I  A GL+YLH+ G +HRD+K  NI+LD E  A ++DFG A+   T       NT  V T G++DP+Y   + LTK SD++S G VL  +L+G
Sbjct:  433 GLRCFSLDEMQSATDNFSHTPI-GRGSFGKVYRGLID---------DGQRKVAIKKLTFGSHQGENEFWNEVEALSKLRHANVVSLIGYCYEREEMILVYELMPLGTLAANLFKNNITDNSLSWEQRLRICIGAARGLDYLHTNGVIHRDVKSSNILLDDEFRAKISDFGFAKLGETMQLHSYINTRIVGTNGYLDPDYMRNQRLTKKSDVYSFGVVLFEVLSG 646          
BLAST of mRNA_C-linearis_contig92.16861.1 vs. uniprot
Match: UPI0009018248 (U-box domain-containing protein 33 n=3 Tax=Ipomoea TaxID=4119 RepID=UPI0009018248)

HSP 1 Score: 139 bits (351), Expect = 6.580e-34
Identity = 85/225 (37.78%), Postives = 122/225 (54.22%), Query Frame = 1
Query:  136 FSYNALYGATNRFSADRVLGSGGYGKVYAGELRTSLLGIAGLESTTKVAIKMLDPTSSQGEDYFQAEVTSPPRLRHANIVPLYGICAERSGLVCPRL-SSSVFDKFKTADSWSKLPGKARVQIVIDVAAGLEYLHS---EGFVHRDIKPGNIILDIEGLAHLTDFGLARRMNTE---------CTNTNPVETFGFMDPEYQDTEVLTKVSDIFSLGSVLACLLTG 771
            FS++ +  AT+ F  +  +G GGYG +Y G LR            T VAIK+L P SSQG   FQ EV    +LRH N+V L G C E   LV   L + S+ ++     +   L  + R++I  ++ + L +LHS    G VH D+KP NI+LD+  ++ L+DFG+ R ++           C  T+P  TF +MDPE+  T  LT  SD++S G +L  LLTG
Sbjct:  530 FSFSEIEEATSNFDPNLKIGEGGYGSIYRGVLRQ-----------TPVAIKILHPDSSQGPSEFQQEVNILSKLRHPNLVTLIGACPESFTLVYEYLPNGSLEERINCKGNTPPLTWQTRIRIATELCSALIFLHSCNGHGIVHGDLKPANILLDLNFVSKLSDFGICRVLSQNELSDNDTSLCWRTDPKGTFVYMDPEFLSTGELTPKSDVYSFGIILLRLLTG 743          
BLAST of mRNA_C-linearis_contig92.16861.1 vs. uniprot
Match: A0A0L9VGL1_PHAAN (Protein kinase domain-containing protein n=2 Tax=Phaseolus angularis TaxID=3914 RepID=A0A0L9VGL1_PHAAN)

HSP 1 Score: 138 bits (348), Expect = 6.630e-34
Identity = 89/225 (39.56%), Postives = 123/225 (54.67%), Query Frame = 1
Query:  130 RCFSYNALYGATNRFSADRVLGSGGYGKVYAGELRTSLLGIAGLESTTKVAIKMLDPTSSQGEDYFQAEVTSPPRLRHANIVPLYGICAERSGLVCPRLSSSVFDK--FKTADSWSKLPGKARVQIVIDVAAGLEYLHS---EGFVHRDIKPGNIILDIEGLAHLTDFGLARRMN-------TECTNTNPVETFGFMDPEYQDTEVLTKVSDIFSLGSVLACLLT 768
            R ++   +  ATN FS    +G GGYG VY  EL             T+VAIK+L P ++QG + FQ EV    R+RH N+V L G C E   LV   +++   D   F+   S   LP + R QI  ++A GL +LH    E  VHRD+KPGNI+LD   ++ ++D GLAR +        T+   T+   TF ++DPEYQ T +L   SDI+SLG +L  L+T
Sbjct:  262 RRYTIEEIEEATNMFSDSLKIGEGGYGPVYRSEL-----------DCTQVAIKVLKPDAAQGREQFQQEVEVLSRIRHPNMVLLLGACPEYGCLVYEYMANGSLDDCLFRRGSSRPPLPWQLRFQIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLDRNYVSKISDVGLARLVPPSVADSVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDIYSLGIMLLQLVT 475          
BLAST of mRNA_C-linearis_contig92.16861.1 vs. uniprot
Match: A0A4D6LU99_VIGUN (Protein brassinosteroid insensitive 1 n=1 Tax=Vigna unguiculata TaxID=3917 RepID=A0A4D6LU99_VIGUN)

HSP 1 Score: 139 bits (350), Expect = 9.840e-34
Identity = 90/225 (40.00%), Postives = 123/225 (54.67%), Query Frame = 1
Query:  130 RCFSYNALYGATNRFSADRVLGSGGYGKVYAGELRTSLLGIAGLESTTKVAIKMLDPTSSQGEDYFQAEVTSPPRLRHANIVPLYGICAERSGLVCPRLSSSVFDK--FKTADSWSKLPGKARVQIVIDVAAGLEYLHS---EGFVHRDIKPGNIILDIEGLAHLTDFGLARRMN-------TECTNTNPVETFGFMDPEYQDTEVLTKVSDIFSLGSVLACLLT 768
            R +S   +  ATN FS    +G GGYG VY  EL             T+VAIK+L P ++QG + FQ EV    R+RH N+V L G C E   LV   +++   D   F+   S   LP + R QI  ++A GL +LH    E  VHRD+KPGNI+LD   ++ ++D GLAR +        T+   T+   TF ++DPEYQ T +L   SDI+SLG +L  L+T
Sbjct: 1039 RRYSIEEIEEATNMFSDSLKIGEGGYGPVYRSEL-----------DCTQVAIKVLKPDAAQGREQFQQEVEVLSRIRHPNMVLLLGACPEYGCLVYEYMANGSLDDCLFRRGSSRPPLPWQLRFQIASEIATGLLFLHQTKPEPLVHRDLKPGNILLDRNYVSKISDVGLARLVPPSVADSVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDIYSLGIMLLQLVT 1252          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig92.16861.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFG1_ECTSI5.520e-8869.72Serine/threonine protein kinase n=1 Tax=Ectocarpus... [more]
S8E3Z9_9LAMI6.940e-3842.11Uncharacterized protein n=1 Tax=Genlisea aurea Tax... [more]
UPI001CF9D2985.610e-3540.00leucine-rich repeat receptor protein kinase HPCA1-... [more]
A0A2P5D473_PARAD3.550e-3438.67GPCR kinase n=2 Tax=Cannabaceae TaxID=3481 RepID=A... [more]
A0A834LKX6_RHOSS3.900e-3438.01Protein kinase domain-containing protein n=1 Tax=R... [more]
A0A2K3NRQ8_TRIPR4.700e-3437.39Leucine-rich repeat receptor-like protein kinase a... [more]
A0A6I9SSE1_SESIN5.140e-3439.29receptor-like protein kinase FERONIA n=1 Tax=Sesam... [more]
UPI00090182486.580e-3437.78U-box domain-containing protein 33 n=3 Tax=Ipomoea... [more]
A0A0L9VGL1_PHAAN6.630e-3439.56Protein kinase domain-containing protein n=2 Tax=P... [more]
A0A4D6LU99_VIGUN9.840e-3440.00Protein brassinosteroid insensitive 1 n=1 Tax=Vign... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig92contigC-linearis_contig92:163090..164225 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score135.6
Seed ortholog evalue3.3e-29
Seed eggNOG ortholog29760.VIT_13s0067g01620.t01
KEGG koko:K04733
KEGG Pathwayko04010,ko04064,ko04620,ko04621,ko04624,ko04722,ko05133,ko05140,ko05142,ko05145,ko05152,ko05162,ko05164,map04010,map04064,map04620,map04621,map04624,map04722,map05133,map05140,map05142,map05145,map05152,map05162,map05164
KEGG ModuleM00686
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004675,GO:0004888,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007178,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019199,GO:0019538,GO:0019899,GO:0019900,GO:0019901,GO:0023052,GO:0036211,GO:0038023,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0060089,GO:0065007,GO:0071704,GO:0071944,GO:0140096,GO:1901564
EggNOG free text desc.receptor-like protein kinase
EggNOG OGs37QHV@33090,3GACR@35493,COG0515@1,KOG1187@2759
EC2.7.11.1
COG Functional cat.T
Best tax levelStreptophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01001
Exons2
Model size774
Cds size762
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig92.16861.1prot_C-linearis_contig92.16861.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig92 163102..164225 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930792.3186312-UTR-C-linearis_contig92:163089..1631011622930792.3186312-UTR-C-linearis_contig92:163089..163101Chordaria linearis ClinC8C monoicousUTRC-linearis_contig92 163090..163101 +
1690881252.7559912-UTR-C-linearis_contig92:163089..1631011690881252.7559912-UTR-C-linearis_contig92:163089..163101Chordaria linearis ClinC8C monoicousUTRC-linearis_contig92 163090..163101 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930792.3333457-CDS-C-linearis_contig92:163101..1634861622930792.3333457-CDS-C-linearis_contig92:163101..163486Chordaria linearis ClinC8C monoicousCDSC-linearis_contig92 163102..163486 +
1690881252.7688067-CDS-C-linearis_contig92:163101..1634861690881252.7688067-CDS-C-linearis_contig92:163101..163486Chordaria linearis ClinC8C monoicousCDSC-linearis_contig92 163102..163486 +
1622930792.3530068-CDS-C-linearis_contig92:163848..1642251622930792.3530068-CDS-C-linearis_contig92:163848..164225Chordaria linearis ClinC8C monoicousCDSC-linearis_contig92 163849..164225 +
1690881252.7784975-CDS-C-linearis_contig92:163848..1642251690881252.7784975-CDS-C-linearis_contig92:163848..164225Chordaria linearis ClinC8C monoicousCDSC-linearis_contig92 163849..164225 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig92.16861.1

>prot_C-linearis_contig92.16861.1 ID=prot_C-linearis_contig92.16861.1|Name=mRNA_C-linearis_contig92.16861.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=254bp
MPQNPVPEPAPTPEPVTPTPGYPFPTNTRAADVEVRNGMRCFSYNALYGA
TNRFSADRVLGSGGYGKVYAGELRTSLLGIAGLESTTKVAIKMLDPTSSQ
GEDYFQAEVTSPPRLRHANIVPLYGICAERSGLVCPRLSSSVFDKFKTAD
SWSKLPGKARVQIVIDVAAGLEYLHSEGFVHRDIKPGNIILDIEGLAHLT
DFGLARRMNTECTNTNPVETFGFMDPEYQDTEVLTKVSDIFSLGSVLACL
LTGG
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mRNA from alignment at C-linearis_contig92:163090..164225+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig92.16861.1 ID=mRNA_C-linearis_contig92.16861.1|Name=mRNA_C-linearis_contig92.16861.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=1136bp|location=Sequence derived from alignment at C-linearis_contig92:163090..164225+ (Chordaria linearis ClinC8C monoicous)
TCCGTACCGGTCATGCCCCAGAACCCAGTTCCGGAACCCGCCCCGACGCC CGAGCCCGTGACCCCGACGCCAGGGTACCCGTTCCCTACGAACACACGAG CAGCCGACGTCGAAGTGAGGAATGGCATGCGATGCTTCAGCTACAACGCG CTCTACGGGGCGACCAATCGATTTTCCGCCGATCGTGTGCTCGGCTCGGG GGGCTACGGCAAGGTCTACGCCGGTGAGCTCCGCACCTCGCTGCTTGGTA TTGCTGGGTTGGAGTCCACGACGAAGGTCGCCATCAAGATGCTGGATCCC ACAAGCTCGCAGGGCGAGGACTACTTTCAGGCGGAAGTGACATCTCCCCC CCGCCTGAGGCACGCGAACATCGTCCCCCTATACGGAATTTGCGCAGGTG TGTTTTTGCTTATTGCTTCTACAGTTTGGAGCTTAGCGTTGAAGATGTTT CAGATCGAAGGATACACTATCACGCCAGGAAAACACTATACCGTGCATAG TTCTCACAGCACACGCGTATTGTAGCGGTGTTCCCTTTTCCCTAAAAATA GATTGTCCTGATCGTCCTGGATTTCGCTATGTTTGCTTCCGCCGGTTGTA CAGGAATTCCTGTAGCTTCAAAGTCTTAGTTACAATAGGAAGACTGCGGA ACCAAATTCCCTCCACATACTGCAATCACCATCGGTCCATTCGTATCGTG AGCTGATACCCCTTCAAAACGGTGATACCTCCCGACGAATTGATTTTCTG CTTCCGCAGAGCGCAGCGGGCTGGTCTGCCCGAGGCTGTCAAGCAGCGTC TTCGACAAGTTTAAGACGGCAGATTCGTGGAGCAAGCTGCCAGGGAAAGC CCGTGTCCAAATCGTCATCGATGTGGCAGCCGGACTTGAATACTTGCACT CTGAGGGTTTCGTCCATCGCGACATCAAGCCCGGAAATATTATTCTCGAC ATCGAAGGACTTGCCCACCTGACCGATTTCGGGTTGGCCCGTAGAATGAA CACCGAATGTACGAACACCAACCCCGTGGAGACGTTCGGGTTCATGGACC CCGAGTACCAAGACACGGAAGTACTTACGAAGGTTTCCGATATCTTCAGC CTCGGAAGCGTGCTTGCTTGCCTCCTGACGGGTGGC
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Coding sequence (CDS) from alignment at C-linearis_contig92:163090..164225+

>mRNA_C-linearis_contig92.16861.1 ID=mRNA_C-linearis_contig92.16861.1|Name=mRNA_C-linearis_contig92.16861.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1524bp|location=Sequence derived from alignment at C-linearis_contig92:163090..164225+ (Chordaria linearis ClinC8C monoicous)
ATGCCCCAGAACCCAGTTCCGGAACCCGCCCCGACGCCCGAGCCCGTGAC
CCCGACGCCAGGGTACCCGTTCCCTACGAACACACGAGCAGCCGACGTCG
AAGTGAGGAATGGCATGCGATGCTTCAGCTACAACGCGCTCTACGGGGCG
ACCAATCGATTTTCCGCCGATCGTGTGCTCGGCTCGGGGGGCTACGGCAA
GGTCTACGCCGGTGAGCTCCGCACCTCGCTGCTTGGTATTGCTGGGTTGG
AGTCCACGACGAAGGTCGCCATCAAGATGCTGGATCCCACAAGCTCGCAG
GGCGAGGACTACTTTCAGGCGGAAGTGACATCTCCCCCCCGCCTGAGGCA
CGCGAACATCGTCCCCCTATACGGAATTTGCGCAGATGCCCCAGAACCCA
GTTCCGGAACCCGCCCCGACGCCCGAGCCCGTGACCCCGACGCCAGGGTA
CCCGTTCCCTACGAACACACGAGCAGCCGACGTCGAAGTGAGGAATGGCA
TGCGATGCTTCAGCTACAACGCGCTCTACGGGGCGACCAATCGATTTTCC
GCCGATCGTGTGCTCGGCTCGGGGGGCTACGGCAAGGTCTACGCCGGTGA
GCTCCGCACCTCGCTGCTTGGTATTGCTGGGTTGGAGTCCACGACGAAGG
TCGCCATCAAGATGCTGGATCCCACAAGCTCGCAGGGCGAGGACTACTTT
CAGGCGGAAGTGACATCTCCCCCCCGCCTGAGGCACGCGAACATCGTCCC
CCTATACGGAATTTGCGCAGAGCGCAGCGGGCTGGTCTGCCCGAGGCTGT
CAAGCAGCGTCTTCGACAAGTTTAAGACGGCAGATTCGTGGAGCAAGCTG
CCAGGGAAAGCCCGTGTCCAAATCGTCATCGATGTGGCAGCCGGACTTGA
ATACTTGCACTCTGAGGGTTTCGTCCATCGCGACATCAAGCCCGGAAATA
TTATTCTCGACATCGAAGGACTTGCCCACCTGACCGATTTCGGGTTGGCC
CGTAGAATGAACACCGAATGTACGAACACCAACCCCGTGGAGACGTTCGG
GTTCATGGACCCCGAGTACCAAGACACGGAAGTACTTACGAAGGTTTCCG
ATATCTTCAGCCTCGGAAGCGTGCTTGCTTGCCTCCTGACGGGTGGCAGC
GCAGCGGGCTGGTCTGCCCGAGGCTGTCAAGCAGCGTCTTCGACAAGTTT
AAGACGGCAGATTCGTGGAGCAAGCTGCCAGGGAAAGCCCGTGTCCAAAT
CGTCATCGATGTGGCAGCCGGACTTGAATACTTGCACTCTGAGGGTTTCG
TCCATCGCGACATCAAGCCCGGAAATATTATTCTCGACATCGAAGGACTT
GCCCACCTGACCGATTTCGGGTTGGCCCGTAGAATGAACACCGAATGTAC
GAACACCAACCCCGTGGAGACGTTCGGGTTCATGGACCCCGAGTACCAAG
ACACGGAAGTACTTACGAAGGTTTCCGATATCTTCAGCCTCGGAAGCGTG
CTTGCTTGCCTCCTGACGGGTGGC
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