prot_C-linearis_contig9.16751.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig9.16751.1
Unique Nameprot_C-linearis_contig9.16751.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length65
Homology
BLAST of mRNA_C-linearis_contig9.16751.1 vs. uniprot
Match: D7FYG2_ECTSI (GBP4, guanylate-binding proteins n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYG2_ECTSI)

HSP 1 Score: 91.3 bits (225), Expect = 5.920e-20
Identity = 45/62 (72.58%), Postives = 51/62 (82.26%), Query Frame = 0
Query:    8 QVTIFNWLGRPNKTAMLEQLKLMVLATDNIQQHDGGKG----KVFGHLIILARDLSGPDKPE 65
            +V IFNWLGRPNKT MLE+L++MVLATD I+Q DG  G    KVFGHLIILARDLSGP+K E
Sbjct:  145 KVIIFNWLGRPNKTTMLEKLEVMVLATDKIKQQDGDGGCFHEKVFGHLIILARDLSGPEKAE 206          
BLAST of mRNA_C-linearis_contig9.16751.1 vs. uniprot
Match: D8LML7_ECTSI (GBP2, guanylate-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LML7_ECTSI)

HSP 1 Score: 54.7 bits (130), Expect = 4.520e-7
Identity = 22/51 (43.14%), Postives = 35/51 (68.63%), Query Frame = 0
Query:    8 QVTIFNWLGRPNKTAMLEQLKLMVLATDNIQQHDGGKGKVFGHLIILARDL 58
            +V IFNWLG PNK+ +LE+L +M+ A + + +       +FGHLI++ RD+
Sbjct:  134 KVVIFNWLGLPNKSTILERLVVMIKAAEKVSRRKNKGEPMFGHLILVMRDV 184          
BLAST of mRNA_C-linearis_contig9.16751.1 vs. uniprot
Match: A0A6H5JJR4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJR4_9PHAE)

HSP 1 Score: 53.1 bits (126), Expect = 1.570e-6
Identity = 20/52 (38.46%), Postives = 35/52 (67.31%), Query Frame = 0
Query:    7 LQVTIFNWLGRPNKTAMLEQLKLMVLATDNIQQHDGGKGKVFGHLIILARDL 58
            + V +FNWLG PNK+ +L++L +M+ A + + +       +FGHLI++ RD+
Sbjct:    1 MYVVLFNWLGLPNKSTILQRLLVMIKAAEKVSRRKTKDEPIFGHLILVMRDV 52          
BLAST of mRNA_C-linearis_contig9.16751.1 vs. uniprot
Match: A0A836CFB5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFB5_9STRA)

HSP 1 Score: 49.3 bits (116), Expect = 3.630e-5
Identity = 24/54 (44.44%), Postives = 32/54 (59.26%), Query Frame = 0
Query:    8 QVTIFNWLGRPNKTAMLEQLKLMVLATDNIQQHDGGKGKVFGHLIILARDLSGP 61
            +V IFNWLG PNKT ML  L L+  +   + + D  +  VFG LI++ RD   P
Sbjct:   24 RVVIFNWLGMPNKTTMLNHLALLQASAAVVNRSD--RDGVFGDLIVVLRDCIAP 75          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16751.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FYG2_ECTSI5.920e-2072.58GBP4, guanylate-binding proteins n=1 Tax=Ectocarpu... [more]
D8LML7_ECTSI4.520e-743.14GBP2, guanylate-binding protein n=1 Tax=Ectocarpus... [more]
A0A6H5JJR4_9PHAE1.570e-638.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CFB5_9STRA3.630e-544.44Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:3886764..3886958 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16751.1mRNA_C-linearis_contig9.16751.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig9 3886764..3886958 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig9.16751.1 ID=prot_C-linearis_contig9.16751.1|Name=mRNA_C-linearis_contig9.16751.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=65bp
MADGPNLQVTIFNWLGRPNKTAMLEQLKLMVLATDNIQQHDGGKGKVFGH
LIILARDLSGPDKPE
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