prot_C-linearis_contig9.16555.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig9.16555.1
Unique Nameprot_C-linearis_contig9.16555.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length579
Homology
BLAST of mRNA_C-linearis_contig9.16555.1 vs. uniprot
Match: D7FQY9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQY9_ECTSI)

HSP 1 Score: 489 bits (1258), Expect = 2.660e-164
Identity = 300/598 (50.17%), Postives = 376/598 (62.88%), Query Frame = 0
Query:    1 MGKKGKGTKKEDKPKKDIPQTTAAKNKAIQEALEGVNVTVSTPTPRPAAPPRTSASKKSDRGGSAPTKIGCTESFRWDNSEKAPVLPPLEKR----GRAQMSRFSIGP---DSFATQAFQGL--QSWTNYLNWRCKGDKALFESALKSKTLKDGLSGPLMIAHMIIKWMSYNCASIAVLNALDALETGEPLHIVVVGATAVYEEKILRESDYWDELLAIFSWRKVRLYLTGPEMSGKDGEFKRKRPGAEEGQQQQEEDEPR--VECCKTNTVDFFLKKGRLELFQKEDTVVVGLNSGFGVAARRMLYTSVAKQDLATNQALWKWIPTLHFIAALELPLMVTGCGEQEALYTRMVLEQVVGTYSVTEFANSPIPFQSTVPGQEDEVRGNAFFTIVQGQQPGFHFATDATQFLPFGGERKETLL-ASTLSTKKWKKP--SSIPERLQHKGIRERASPLVPLKRYGNYPPDNREKCNPDDDGQSESDVPV---RAGRGEEKEGLLPPAMVKLKHSVV---DEGPGSLKIILEDVFMTDPATARVGMRRHRFTLHYFDCQALRDVVFEAALPKEVDHTTTQITFKRSAASVTIVVGLLETKK 578
            MGKKGKGTKKE+KPKK+      +    ++EALE  NVT S+     A+ PRTS+SKKSDR  S  TKIGCTESFRWDNSE+APVLPP+       G+  +  F++     +      +  +    W  Y +WRC G  AL +SA+KSKTLKDGLS PL+IA M+  W+    A     + +DA E G PLHIVV+GATAV EEKILRE++YWDEL   FS R++ LYLTGPEMSGKDG F  K PG EEGQ     D PR  VEC K N VDFFL+KGRL  F+KEDTVVVGLN GFG+A   ++     KQ L +N+ LWKWIPTL+F AAL+LPLM+T     +A   R +L+ VVGTY +     SP+PFQSTVPG +  V+ N+   +V+GQ+PGF+F+    Q LP    R E L  A T +  K   P  +S+ +   H   RE+ S LVPLK+YGNYPP+       DDDG +++ VP    RAG G        P  V LK+  +   D    +L++ L+DVFMT+PA AR+G RR    L Y+DCQ   DVVFEAALP EVDHT T+I F+RS  S  +V  L E+ K
Sbjct:    1 MGKKGKGTKKEEKPKKE----PLSSRDRLKEALEATNVTTSS-----ASAPRTSSSKKSDRSSSVVTKIGCTESFRWDNSEEAPVLPPMPTTVHVGGQEGLRIFALSHMMVERSVPILYNNILRHGWNKYFSWRC-GTNALTKSAMKSKTLKDGLSAPLVIAFMVSVWIHAE-AQAKGSSRMDAAENGNPLHIVVIGATAVNEEKILRETNYWDELSNFFSGRELHLYLTGPEMSGKDGVFHTK-PGREEGQA----DGPRMRVECWKANGVDFFLQKGRLATFRKEDTVVVGLNCGFGMAGHHVIKNQSPKQALPSNEVLWKWIPTLYFFAALDLPLMITASSLADATTARSMLQYVVGTYELVRITLSPVPFQSTVPGDQ-VVQANSHCILVRGQRPGFNFSV---QVLPDIDPRTEILRKALTNNDPKDNFPLHASVRKAGSHNDTREQGSELVPLKKYGNYPPEKVTSI--DDDGATDTHVPAPGTRAGEG--------PMKVNLKYKFLRMSDGASDTLEMTLQDVFMTEPAQARLGARRRSVVLFYYDCQKFCDVVFEAALPDEVDHTKTKIVFRRSDCSAKVVFRLKESDK 568          
BLAST of mRNA_C-linearis_contig9.16555.1 vs. uniprot
Match: A0A485LK42_9STRA (Aste57867_20630 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LK42_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 1.630e-12
Identity = 81/319 (25.39%), Postives = 130/319 (40.75%), Query Frame = 0
Query:   75 FRWDNSEKAPVLPPLEKRGRAQMSRFSIGPDSFATQAFQGLQSWTNYLNWRCKGDKALFESALKSKTLKDGLSGPLMIAHMIIKWMSYNCASIAVLNALDALETGEPLHIVVVGATAVYEEKILRESDYWDELLAIFSWRKVRLYLTGPEMSGKDGEFKRKRPGAEEGQQQQEEDEPRVECCKTNTVDFFLKKGRLELFQKEDTVVVGLNSGFGVAARRMLYTSVAKQDLATNQALWKWIPTLHFIAALELPLMVTGCGEQEALYTRMVLE-QVVGTYSVTEFANSPIPFQSTV--PGQEDEV--RGNAFFTIVQGQQP 388
            FRW   +K P LPP +           + P   A  A      W  YL  RC   + L   A +  +  D LS P+   +          A++  L AL++    + LH++VVGAT   E++IL++++YW+EL A F    ++L+  GPE+S  D       P  + G                 T   FL             +V+G N+GFG       +    + DL     LW W+P L+ IA   +  +     +   L     ++ +VVG   +     +P    S +   G+++    R N+F  ++QG  P
Sbjct:   58 FRWTEQKKFPALPPRDYS--------HLNPPPTAPLAL----GWQGYLE-RCHSGRNLVAMATQDPSFLDALSFPMTFIY---------AATLLRLAALNSHLPPDCLHVLVVGATVKAEQRILQQTNYWNELAAFFPHVPLKLWFIGPEVSA-DTRPSPLPPSMQVG-------------TFRGTAGAFLAAH--PFLTPRHAIVIGYNTGFGN------FVESDRFDL-----LWSWLPDLYAIADSGIAAVFACANDYADLNGEFAVQTRVVGARMLLFPKENPFSAASHLHEEGKKNTAWSRANSFLYVIQGCDP 327          
BLAST of mRNA_C-linearis_contig9.16555.1 vs. uniprot
Match: A0A0P1B1J6_PLAHL (Mynd finger family protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B1J6_PLAHL)

HSP 1 Score: 76.6 bits (187), Expect = 2.260e-11
Identity = 79/331 (23.87%), Postives = 132/331 (39.88%), Query Frame = 0
Query:   75 FRWDNSEKAPVLPPLEKRGRAQMSRFSIGPDSFATQAFQGLQSWTNYLNWRCK--GDKALFESALKSKTLKDGLSGPLMIAHMIIKWMSYNCASIAVLNALDALETGEPLHIVVVGATAVYEEKILRESDYWDELLAIFSWRKVRLYLTGPEMSGKDGEFKRKRPGAEEGQQQQEEDEPRVECCKTNTVDFFLK----KGRLELFQKED---------TVVVGLNSGFGVAARRMLYTSVAKQDLATNQALWKWIPTLHFIAALELPLMVTGCGEQEALYTRMVLE-QVVGTYSVTEFANSPIPFQSTV--PGQEDEV--RGNAFFTIVQG 385
            FRW  S++ P+LPP   R        S G              W  +L  R     +  L   A+   ++ D LS P+ + H              VL  L+ L     L ++++G++   E+++LR ++YW+E+ + F+  KV L+  GPE+                       DEP  +    N + F LK    KG    FQK           +V+VG N+GFG              D   ++ L+ W+P L+ IA   +P + T   +   +     ++ +++G   +     +P    S     GQ++    RGN+F  +V G
Sbjct:   46 FRWLESKEFPLLPPFPNRS----VDLSCG--------------WKEFLVSRSSPNSNADLVAKAVNDPSMLDALSFPITLLH--------------VLQQLE-LSVDSDLRVLIIGSSRKAEQRVLRITNYWNEISSFFAKAKVTLFFIGPEV-----------------------DEPDADRI-NNALPFNLKVHHFKGTFGSFQKSQLYGECAPQASVIVGYNTGFGNFV-----------DSHRHELLFSWLPDLYRIAESNIPAIFTCANDYADMNGEFAVQSRIIGAKMLLLPKQNPFSAASHFHEQGQQETAWSRGNSFVYVVCG 308          
BLAST of mRNA_C-linearis_contig9.16555.1 vs. uniprot
Match: A0A6G0XJT5_9STRA (PIH1_CS domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XJT5_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 2.690e-10
Identity = 81/321 (25.23%), Postives = 131/321 (40.81%), Query Frame = 0
Query:   75 FRWDNSEKAPVLPPLEKRGRAQMSRFSIGPDSFATQAFQGLQSWTNYLNWRCKGDKALFESALKSKTLKDGLSGPLMIAHMIIKWMSYNCASIAVLNALDALETGEPLHIVVVGATAVYEEKILRESDYWDELLAIF-SWRKVRLYLTGPEMSGKDGEFKRKRPGAEEGQQQQEEDEPRVECCKTN-TVDFFLKKGRLELFQKEDTVVVGLNSGFGVAARRMLYTSVAKQDLATNQALWKWIPTLHFIAALELPLMVTGCGEQEALYTRMVLE-QVVGTYSVTEFANSPIPFQSTV--PGQEDEV--RGNAFFTIVQGQQP 388
            FRW + ++ P LP    R      R S+ P S         Q W  YL  +C     L   A +  +  D LS P+ + +       +              E  E +H++++GAT   E+++LR++ YWDE+ A F    K+ L+  GPE+S      +   P             PR++    + T   FL     E F  ++ V++G N+GFG       +   ++ DL      W W+P L  IA   LP +     +   L     +  +V+G+  +     +P    S +   G++D    R N+F   VQG  P
Sbjct:   23 FRWTDQKRFPPLPQRTPR------RPSVEPLS---------QGWKGYLE-KCHSVN-LIPLASQDPSFLDALSFPMTLVYAATALQLHK-------------EWEESVHVLIIGATVKAEQRVLRQTRYWDEIAAFFPDVSKINLWFIGPEVS-----TELDLPATS----------PRLKVRFVHSTAGEFLAAHSGE-FTSKNAVIIGYNTGFGN------FVESSRYDL-----FWSWLPDLMAIADSGLPGIFACANDYADLNGEFAIHTRVIGSKMLLLPKENPFSAASHLHEEGKKDTAWSRANSFMYAVQGFDP 286          
BLAST of mRNA_C-linearis_contig9.16555.1 vs. uniprot
Match: A0A061SFL9_9CHLO (Mitochondrial splicing suppressor protein 51 n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SFL9_9CHLO)

HSP 1 Score: 72.8 bits (177), Expect = 4.210e-10
Identity = 78/320 (24.38%), Postives = 128/320 (40.00%), Query Frame = 0
Query:   75 FRWDNSEKAPVLPPLEKRGRAQMSRFSIGPDSFATQAFQGLQSWTNYLNWRCKGDKALFESALKSKTLKDGLSGPLMIAHMIIKWMSYNCASIAVLNALDALETGEPLHIVVVGATAVYEEKILRESDYWDELLAIFSWRKVRLYLTGPEMSGKDGEFKRKRPGAEEGQQQQEEDEPRVECCKTNTVDFFLKKGRLELFQKEDTVVVGLNSGFGVAARRMLYTSVAKQDLATNQALWKWIPTLHFIAALELPLMVTGCGEQEALYT-RMVLEQVVGTYSVTEFANSPIPFQST--VPGQEDEVRG--NAFFTIVQGQQPG 389
             RW    K   LPP  K          + P          L  W+++ + R +G K      +    L DGLS PL     + + +    A  A+L+    L       I V+GA+   E+++LR++ YWDE+  +F   +V L+L GPE+S            A+   + Q E       C   T   FLKK      +    ++VG N+G G +    L +S              W+  L  +    L +++T   +   L   R V+E+ +G +       SP    +T  +PG++D+     N+    +QG + G
Sbjct:   73 MRWSPDTKFLALPPFRKG--------MVPP----------LTGWSDFFSVRLEGAKEKDGRVVVEPPLLDGLSFPLTFLFALRELLRTGGADKAILSRKTIL-------IGVLGASERAEQRLLRDTSYWDEVGHMFPGSRVELWLVGPEVS------------ADSPMRPQGESSGMAAGCMRGTTGDFLKK-----MEGRSPILVGFNTGLG-SGDGPLRSS--------------WLGDLRMVLERNLLMVLTCANDHTDLRAEREVIEKDLGAHYALFPRRSPFNAVTTTHLPGRQDDTWACANSIVYAIQGYEAG 335          
BLAST of mRNA_C-linearis_contig9.16555.1 vs. uniprot
Match: A0A7S0PV55_9EUKA (Hypothetical protein n=2 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0PV55_9EUKA)

HSP 1 Score: 63.5 bits (153), Expect = 5.150e-7
Identity = 66/222 (29.73%), Postives = 96/222 (43.24%), Query Frame = 0
Query:   71 CTESFRWDNSEKAPVLPPLEKRGRAQMSRFSIGPDSFATQAFQGLQSWTNYLNWRCKGDKALFESALKSKTLKDGLSGPLMIAHMIIKWMSYNCASIAVLNALDALETGEP----LHIVVVGATAVYEEKILRESDYWDELLAIFSWRKVRLYLTGPEMSGKDGEFKRKRPGAEEGQQQQEEDEPRVECCKTNTVDFFLKKGRLELFQKEDTVVVGLNSGFG 288
            C  + RWD   K  + PPL K        +   P SF+T     L  W +Y+  R   D A     +  KTL DGLS P                 +++L+A+  L    P    L+I+++GA++  EE++LR+SDYW E+         RL   GPE+        R R  A E    Q  D  R EC K    D   ++  L      ++++VG N+G G
Sbjct:  129 CVGTLRWD---KDALFPPLPK--------WPGTPPSFSTPLV--LTGWRDYIEVRFPAD-ASGTIRVDPKTL-DGLSYP-----------------VSLLSAMQRLRLRPPQPGPLNILIIGASSKAEERLLRDSDYWQEIEHFIP--SARLIFVGPEID-------RPRHRAVE----QCGDALRAECFKGTLGDLLREQSHLS---PANSLIVGFNTGMG 302          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16555.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FQY9_ECTSI2.660e-16450.17Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A485LK42_9STRA1.630e-1225.39Aste57867_20630 protein n=1 Tax=Aphanomyces stella... [more]
A0A0P1B1J6_PLAHL2.260e-1123.87Mynd finger family protein n=1 Tax=Plasmopara hals... [more]
A0A6G0XJT5_9STRA2.690e-1025.23PIH1_CS domain-containing protein n=1 Tax=Aphanomy... [more]
A0A061SFL9_9CHLO4.210e-1024.38Mitochondrial splicing suppressor protein 51 n=2 T... [more]
A0A7S0PV55_9EUKA5.150e-729.73Hypothetical protein n=2 Tax=Coccolithus braarudii... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR28069FAMILY NOT NAMEDcoord: 96..350

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:1313262..1322211 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16555.1mRNA_C-linearis_contig9.16555.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig9 1313262..1322211 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig9.16555.1 ID=prot_C-linearis_contig9.16555.1|Name=mRNA_C-linearis_contig9.16555.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=579bp
MGKKGKGTKKEDKPKKDIPQTTAAKNKAIQEALEGVNVTVSTPTPRPAAP
PRTSASKKSDRGGSAPTKIGCTESFRWDNSEKAPVLPPLEKRGRAQMSRF
SIGPDSFATQAFQGLQSWTNYLNWRCKGDKALFESALKSKTLKDGLSGPL
MIAHMIIKWMSYNCASIAVLNALDALETGEPLHIVVVGATAVYEEKILRE
SDYWDELLAIFSWRKVRLYLTGPEMSGKDGEFKRKRPGAEEGQQQQEEDE
PRVECCKTNTVDFFLKKGRLELFQKEDTVVVGLNSGFGVAARRMLYTSVA
KQDLATNQALWKWIPTLHFIAALELPLMVTGCGEQEALYTRMVLEQVVGT
YSVTEFANSPIPFQSTVPGQEDEVRGNAFFTIVQGQQPGFHFATDATQFL
PFGGERKETLLASTLSTKKWKKPSSIPERLQHKGIRERASPLVPLKRYGN
YPPDNREKCNPDDDGQSESDVPVRAGRGEEKEGLLPPAMVKLKHSVVDEG
PGSLKIILEDVFMTDPATARVGMRRHRFTLHYFDCQALRDVVFEAALPKE
VDHTTTQITFKRSAASVTIVVGLLETKK*
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