prot_C-linearis_contig9.16527.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig9.16527.1
Unique Nameprot_C-linearis_contig9.16527.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length618
Homology
BLAST of mRNA_C-linearis_contig9.16527.1 vs. uniprot
Match: D7FR54_ECTSI (RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR54_ECTSI)

HSP 1 Score: 732 bits (1890), Expect = 3.060e-260
Identity = 379/437 (86.73%), Postives = 408/437 (93.36%), Query Frame = 0
Query:  123 VEGKVLTGERKARSVRVEEIACFRRRMGIKARGEEVADPMESFGDMPAAGPGDDARQTRRVILRNVEESAWKEPTPVQMQAVPILVAGRDLLAAAPTGSGKTAAFVMPMILRLGVQRACAEASGVRGLLLAPTRELAAQIHRDVVRLSRGRKLRVCLLTKAGSAKAAAATGMDSKKALSGYDIVVSTPLRLVALVREGAVSLVSVEMVVLDEADKLFDAGTVGGSNDKAFVGQVDEVLAACSNEQVQRALFSATIGQQMKELAKSVLRDPIFLTVGTDNAGAADIDQRLVYVGKEEGKLLAIRQLVQEGLRPPVLVFLQSKDRAKELFHELVYDGINTDVMHASRTQDQRDDIIQRFRTGEIWVLICTDLMARGIDFKGVNMVINYDFPQSAVSYIHRIGRTGRAGRHGVAVTLFTESDMDYLRSIANVMRLSGCEV 559
            V+G V TGE KARS+R+EE+ACFRRRMGIK +GEEVADPMESF +MP+A   +DA QTRRV+L NVEESAWKEPTPVQMQAVPILVAGRDLLAAAPTGSGKTAAFVMPMILRLGVQRA  +ASGVRG+LLAPTRELAAQIHRDVVRLSRGR+LRVCLLTKAG+ KAAAATGMDS+ ALSGYDIVVSTP+RLVALVRE AV L SVEMVVLDEADKLFDAG   G +DKAF+GQVDEVLAACS++QVQRALFSAT+GQQ+KEL++SVLRDPIFLTVGT NAGAADIDQRLVYVG+EEGKLLAIRQLVQEGLRPPVLVFLQSKDRAK LFHELVYDGINTDVMHASRTQDQRD+IIQRFRTGEIWVLICTDL+ARGIDFKGVNMVINYDFPQSAVSYIHRIGRT     HGVAVTLFTESDM+ LRSIANV+RLSGCE+
Sbjct:   18 VKGGVETGEAKARSIRLEEVACFRRRMGIKVKGEEVADPMESFSEMPSATTSEDAGQTRRVLLHNVEESAWKEPTPVQMQAVPILVAGRDLLAAAPTGSGKTAAFVMPMILRLGVQRADPQASGVRGILLAPTRELAAQIHRDVVRLSRGRRLRVCLLTKAGATKAAAATGMDSRNALSGYDIVVSTPMRLVALVRERAVCLASVEMVVLDEADKLFDAGAASGGSDKAFIGQVDEVLAACSHQQVQRALFSATVGQQVKELSESVLRDPIFLTVGTQNAGAADIDQRLVYVGREEGKLLAIRQLVQEGLRPPVLVFLQSKDRAKALFHELVYDGINTDVMHASRTQDQRDNIIQRFRTGEIWVLICTDLVARGIDFKGVNMVINYDFPQSAVSYIHRIGRTXXXXXHGVAVTLFTESDMNSLRSIANVIRLSGCEM 454          
BLAST of mRNA_C-linearis_contig9.16527.1 vs. uniprot
Match: A0A6H5JCM6_9PHAE (RNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCM6_9PHAE)

HSP 1 Score: 625 bits (1612), Expect = 6.500e-220
Identity = 326/387 (84.24%), Postives = 355/387 (91.73%), Query Frame = 0
Query:  115 KCNSSKGV-VEGKVLTGERKARSVRVEEIACFRRRMGIKARGEEVADPMESFGDMPAAGPGDDARQTRRVILRNVEESAWKEPTPVQMQAVPILVAGRDLLAAAPTGSGKTAAFVMPMILRLGVQRACAEASGVRGLLLAPTRELAAQIHRDVVRLSRGRKLRVCLLTKAGSAKAAAATGMDSKKALSGYDIVVSTPLRLVALVREGAVSLVSVEMVVLDEADKLFDAGTVGGSNDKAFVGQVDEVLAACSNEQVQRALFSATIGQQMKELAKSVLRDPIFLTVGTDNAGAADIDQRLVYVGKEEGKLLAIRQLVQEGLRPPVLVFLQSKDRAKELFHELVYDGINTDVMHASRTQDQRDDIIQRFRTGEIWVLICTDLMARGIDFK 500
            K  S  G+ V+G V TGE KAR +R+EE+ACFRRRMGIK +GEEVADPM SF +MP+A    +A QTRRV+L NVEESAWKEPTPVQMQAVPILVAGRDLLAAAPTGSGKTAAFVMPMILRLGVQRA  +ASGVRG+LLAPTRELAAQIHRDVVRLSRGR+LRVCLLTKAG+ KAAAATGMDSK ALSGYDIVVSTP+RLVALVRE A+ L SVEMVVLDEADKLFDAG   G +DKAF+GQVDEVLAACS++QVQRALFSAT+GQQ+KEL++SVLRD IFLTVGT N+GAADIDQRLVYVG+EEGKLLA+RQLVQEGLRPPVLVFLQSKDRAK LFHELVYDGINTDVMHASRTQDQRD+IIQRFRTGEIWVLICTDL+ARGIDFK
Sbjct:    9 KGKSGNGIAVKGGVETGEAKARLIRLEEVACFRRRMGIKVKGEEVADPMASFSEMPSASTSKEAAQTRRVLLHNVEESAWKEPTPVQMQAVPILVAGRDLLAAAPTGSGKTAAFVMPMILRLGVQRADPQASGVRGILLAPTRELAAQIHRDVVRLSRGRRLRVCLLTKAGATKAAAATGMDSKNALSGYDIVVSTPMRLVALVRERAICLASVEMVVLDEADKLFDAGAASGGSDKAFIGQVDEVLAACSHQQVQRALFSATVGQQVKELSESVLRDHIFLTVGTQNSGAADIDQRLVYVGREEGKLLAVRQLVQEGLRPPVLVFLQSKDRAKALFHELVYDGINTDVMHASRTQDQRDNIIQRFRTGEIWVLICTDLVARGIDFK 395          
BLAST of mRNA_C-linearis_contig9.16527.1 vs. uniprot
Match: A0A2D4C2B4_PYTIN (RNA helicase (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C2B4_PYTIN)

HSP 1 Score: 494 bits (1271), Expect = 9.100e-165
Identity = 258/466 (55.36%), Postives = 345/466 (74.03%), Query Frame = 0
Query:  140 EEIACFRRRMGIKARGEEVADPMESFGDMPAAGPGDDARQTRRVILRNVEESAWKEPTPVQMQAVPILVAGRDLLAAAPTGSGKTAAFVMPMILRLGVQRACAEASGVRGLLLAPTRELAAQIHRDVVRLSRGRKLRVCLLTKAGSAKAAAATGMDSKK--ALSGYDIVVSTPLRLVALVREGAVSLVSVEMVVLDEADKLFDAGTVGGSNDKAFVGQVDEVLAACSNEQVQRALFSATIGQQMKELAKSVLRDPIFLTVGTDNAGAADIDQRLVYVGKEEGKLLAIRQLVQEGLRPPVLVFLQSKDRAKELFHELVYDGINTDVMHASRTQDQRDDIIQRFRTGEIWVLICTDLMARGIDFKGVNMVINYDFPQSAVSYIHRIGRTGRAGRHGVAVTLFTESDMDYLRSIANVMRLSGCEVPDWMLTMKKERRSDRRKREQGAPRRDQIGTVSKYDVRQKRRRQF 603
            EE+  FR++M I+  G  V  P+ +F  M          + R V+L N+E S +KEPTP+QMQA+P L+ GRD+LA APTGSGKTAAF +PM+  LG      +  G+R ++L+PTRELA QI  +  RLS GRK  + LL+KA      AAT + S K      +D+V++TPLRLV LV+E  + L  VEM+ LDEAD+LFD G         FV Q+DE+LAAC++ +VQRA+FSAT+ Q ++E+A+SVLRDP+ +++G  NAGA+ I+Q+LV+VGKEEGKL+A++QL+QEGLR P L+F+Q+K+RA EL+HEL+YDGIN   +HA RT++QRD+ I++FR G++WVLICTDLM+RGIDFK VNMVINYDFPQ AVSYIHRIGRTGR GR G+AVT FTE DM YLR+IANVM+LSGC+VPDWMLT+KK   + R++  +  P+R +I TVS YD+++  +R+ 
Sbjct:  172 EEVRLFRKQMNIRVEGTSVPAPIATFDAMKLNAT---QLKMRSVLLHNIEASEYKEPTPIQMQAIPSLLLGRDVLATAPTGSGKTAAFAIPMLANLGAP----QQQGIRAVVLSPTRELAVQIFHEFQRLSAGRKFHIVLLSKA-----TAATMISSIKNNCTVNHDLVIATPLRLVHLVQEAKLDLSMVEMICLDEADRLFDMG---------FVEQIDEILAACTHPRVQRAMFSATMLQGVEEMAQSVLRDPVKISIGVKNAGASSIEQKLVFVGKEEGKLVAMKQLIQEGLRLPALLFVQNKERANELYHELLYDGINVGAVHADRTKEQRDETIRQFRAGQVWVLICTDLMSRGIDFKAVNMVINYDFPQDAVSYIHRIGRTGRGGRKGLAVTFFTEDDMAYLRTIANVMKLSGCDVPDWMLTLKKASATKRKQLLKAPPQRKRISTVSGYDLQKAHKRKM 616          
BLAST of mRNA_C-linearis_contig9.16527.1 vs. uniprot
Match: A0A8K1CQ63_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CQ63_PYTOL)

HSP 1 Score: 490 bits (1262), Expect = 1.160e-162
Identity = 258/480 (53.75%), Postives = 350/480 (72.92%), Query Frame = 0
Query:  140 EEIACFRRRMGIKARGEEVADPMESFGDMPAAGPGDDARQTRRVILRNVEESAWKEPTPVQMQAVPILVAGRDLLAAAPTGSGKTAAFVMPMILRLGVQRACAEASGVRGLLLAPTRELAAQIHRDVVRLSRGRKLRVCLLTKAGSAKAAAATGMDSKKA--LSGYDIVVSTPLRLVALVREGAVSLVSVEMVVLDEADKLFDAGTVGGSNDKAFVGQVDEVLAACSNEQVQRALFSATIGQQMKELAKSVLRDPIFLTVGTDNAGAADIDQRLVYVGKEEGKLLAIRQLVQEGLRPPVLVFLQSKDRAKELFHELVYDGINTDVMHASRTQDQRDDIIQRFRTGEIWVLICTDLMARGIDFKGVNMVINYDFPQSAVSYIHRIGRTGRAGRHGVAVTLFTESDMDYLRSIANVMRLSGCEVPDWMLTMKKERRSDRRKREQGAPRRDQIGTVSKYDVRQKRRRQFMVNDSKKAAALGNN 617
            EEI  FR++M I+  G  V  P+ +F  M   G  +   + R V+L+N+E S +KEPTP+QMQA+P ++ GRD+LA APTGSGKTAAF +P++  LGV +      G+R ++L+PTRELA QI  +  RLS GRK  + LL+KA      AAT + S K+     +DI+++TPLRLV L++E  + L  VEMV LDEAD+LFD G         FV Q+DE+LAAC++ ++QRA+FSAT+ Q ++E+A+SVLRDPI +++G  NAGA+ I+Q+LV+VGKEEGKL+A++QL+  GL+ P L+F+Q+K+RA EL+HEL+YDGIN   +HA RT++QRD+ +++FRTG++WVLICTDLM+RGIDFK VNMVINYDFPQ AVSYIHRIGRTGR GR G AVT FTE DM YLR+IANVM+LSGCEVPDWMLT+KK   + R++  +   +R +I TVS YD+++  +R    +     +  G N
Sbjct:  203 EEIRVFRKQMNIRVDGASVPPPIATFDAMKLVGTQE---KMRSVLLKNIEASEYKEPTPIQMQAIPSMLLGRDVLATAPTGSGKTAAFAIPLLANLGVPKQ----EGIRAVVLSPTRELAVQISTEFHRLSAGRKFHIVLLSKA-----TAATMISSIKSNCTVNHDILIATPLRLVHLIQEAKLDLSMVEMVCLDEADRLFDMG---------FVEQIDEILAACTHPKIQRAMFSATMMQGVEEMAQSVLRDPIKISIGVKNAGASSIEQKLVFVGKEEGKLVAMKQLIHSGLKIPALLFVQNKERANELYHELLYDGINVGAVHADRTKEQRDETMRQFRTGQVWVLICTDLMSRGIDFKAVNMVINYDFPQDAVSYIHRIGRTGRGGRQGYAVTFFTEDDMLYLRTIANVMKLSGCEVPDWMLTLKKASANKRKELVKAPLQRKRISTVSGYDLQKSHKRHLAKSKKHSPSDEGGN 661          
BLAST of mRNA_C-linearis_contig9.16527.1 vs. uniprot
Match: A0A225VXV3_9STRA (RNA helicase n=2 Tax=Phytophthora TaxID=4783 RepID=A0A225VXV3_9STRA)

HSP 1 Score: 474 bits (1220), Expect = 6.890e-159
Identity = 254/471 (53.93%), Postives = 343/471 (72.82%), Query Frame = 0
Query:  140 EEIACFRRRMGIKARGEEVADPMESFGDMPAAGPGDDARQTRRVILRNVEESAWKEPTPVQMQAVPILVAGRDLLAAAPTGSGKTAAFVMPMILRLGVQRACAEASGVRGLLLAPTRELAAQIHRDVVRLSRGRKLRVCLLTKAGSAKAAAATGMDSKKALSGYDIVVSTPLRLVALVREGAVSLVSVEMVVLDEADKLFDAGTVGGSNDKAFVGQVDEVLAACSNEQVQRALFSATIGQQMKELAKSVLRDPIFLTVGTDNAGAADIDQRLVYVGKEEGKLLAIRQLVQEGLRPPVLVFLQSKDRAKELFHELVYDGINTDVMHASRTQDQRDDIIQRFRTGEIWVLICTDLMARGIDFKGVNMVINYDFPQSAVSYIHRIGRTGRAGRHGVAVTLFTESDMDYLRSIANVMRLSGCEVPDWMLTMKKERRSDRRKREQGAPRRDQIGTVSKYDVRQKRRRQFMVNDSKK 610
            E +   RR++GI+  G  V  P+ SF DM        A+Q +R++L+N+E S +KEPT VQMQA+P  +  RD+LA APTGSGKTAAF +P++  L         SG+R ++LAPTR+LA QI  +  RL+ G+KL V LL+KA +A  A+ T   SK A++ +D++++TPLRLV L++E  V L +VEMV LDEAD+L + G         FV QVDE+ AAC++ +VQRA+FSAT+ + ++ELA++VLRDP+ + VGT NAGA  IDQ+LV+VGKEEGKL+A++QL+ EGL+ P L+F+Q+K+RA EL+HEL+YDG+N   +HA RT++QRDD+I+RFRTGE+WVLICTDLM+RG+DFK VNMVINYDFPQSAVSYIHRIG          AVT FTE DM YLR+IANVM++SGCEVPDWML++KK   S R++  +  P R +I TVS YD+++  R + M   + K
Sbjct:    9 EGVQMLRRQLGIRVSGVSVPAPITSFADMRLDSSAS-AQQMKRLLLQNIERSEYKEPTSVQMQAIPSFLLRRDVLATAPTGSGKTAAFAIPILANLAA--GSGTGSGIRSIVLAPTRDLAVQIRTEFTRLAAGKKLHVTLLSKATAATIASQT--KSKLAVN-HDVLIATPLRLVHLIQEAKVDLSTVEMVCLDEADRLLELG---------FVEQVDEIFAACTHAKVQRAMFSATMLEGVEELAQTVLRDPVKVAVGTKNAGATTIDQKLVFVGKEEGKLVAMKQLLHEGLQLPALLFVQNKERANELYHELLYDGVNIGAVHADRTKEQRDDVIRRFRTGEVWVLICTDLMSRGMDFKAVNMVINYDFPQSAVSYIHRIGXXXXXXXXXKAVTFFTEDDMVYLRTIANVMKISGCEVPDWMLSLKKASVSKRKELLKAPPTRHRINTVSGYDLQKSNRLKQMKQSNHK 464          
BLAST of mRNA_C-linearis_contig9.16527.1 vs. uniprot
Match: A0A1V9ZVZ5_9STRA (RNA helicase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZVZ5_9STRA)

HSP 1 Score: 473 bits (1216), Expect = 3.380e-158
Identity = 254/476 (53.36%), Postives = 336/476 (70.59%), Query Frame = 0
Query:  140 EEIACFRRRMGIKARGEEVADPMESFGDMPAAGPGDDARQTRRVILRNVEESAWKEPTPVQMQAVPILVAGRDLLAAAPTGSGKTAAFVMPMILRLGVQRACAEASGVRGLLLAPTRELAAQIHRDVVRLSRGRKLRVCLLTKAGSAKAAAATGMDSKKALSGYDIVVSTPLRLVALVREGAVSLVSVEMVVLDEADKLFDAGTVGGSNDKAFVGQVDEVLAACSNEQVQRALFSATIGQQMKELAKSVLRDPIFLTVGTDNAGAADIDQRLVYVGKEEGKLLAIRQLVQEGLRPPVLVFLQSKDRAKELFHELVYDGINTDVMHASRTQDQRDDIIQRFRTGEIWVLICTDLMARGIDFKGVNMVINYDFPQSAVSYIHRIGRTGRAGRHGVAVTLFTESDMDYLRSIANVMRLSGCEVPDWMLTMKKERRSDRRKREQGAPRRDQIGTVSKYDVRQKRRRQFMV--NDSKKAAA 613
            ++I   R+R+ I   G  V DP+  F  M AA      +  + V+L N+E S +K PT +QMQA+P ++  RD+L  APTGSGKTAAF +PM+L L   +   +  G+R ++LAPTRELA QIH +  RLS G+K  + LL+KA ++  A+     +K     YDIV++TPLRLV L+ E ++ L  VEM+ LDEAD+LF+ G         FV Q+DEV AAC+N  +QR +FSAT+ Q ++E+A+SVL+DP+ + +G  NAGA  I+QRL++VGKEEGKL+A++QL+QEGL+ PVL+F+Q+KDRAKEL+HELVYDGIN   +HA RT++QRD +I+ FRTG +WVLICTDLM+RGIDFKGVNMVINYDFPQSAVSYIHRIG        G AVT FTESDM YLR+IANVM+LSGC+VPDWML MKK     R++  +  P+R +I TVS YD+++    + M   N  KK  A
Sbjct:   54 DDIKHLRKRLNIAVWGTVVPDPIVEFAQMKAA------KSIKSVLLTNIESSEYKNPTAIQMQAIPAILQKRDVLGIAPTGSGKTAAFAIPMLLNLETPQ---QDHGIRSIVLAPTRELAVQIHGEFQRLSSGKKFHISLLSKASASTMAS----HAKTCTVNYDIVIATPLRLVHLISEQSIPLDKVEMICLDEADRLFEMG---------FVEQIDEVFAACTNPSLQRMMFSATMLQGVEEMAQSVLKDPVKVAIGVKNAGAITINQRLMFVGKEEGKLVAMKQLIQEGLKLPVLMFVQNKDRAKELYHELVYDGINVGAIHADRTKEQRDKVIKDFRTGAVWVLICTDLMSRGIDFKGVNMVINYDFPQSAVSYIHRIGXXXXXXXXGEAVTFFTESDMIYLRTIANVMKLSGCDVPDWMLAMKKASVRQRKQLLKAPPKRHRIETVSGYDLKKAHNHKLMKKHNAEKKKVA 507          
BLAST of mRNA_C-linearis_contig9.16527.1 vs. uniprot
Match: A0A2P4XS83_9STRA (RNA helicase n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XS83_9STRA)

HSP 1 Score: 479 bits (1233), Expect = 4.430e-158
Identity = 256/472 (54.24%), Postives = 347/472 (73.52%), Query Frame = 0
Query:  129 TGERKARSVRVEEIACFRRRMGIKARGEEVADPMESFGDMPAAGPGDDARQTRRVILRNVEESAWKEPTPVQMQAVPILVAGRDLLAAAPTGSGKTAAFVMPMILRLGVQRACAEASGVRGLLLAPTRELAAQIHRDVVRLSRGRKLRVCLLTKAGSAKAAAATGMDSKKALSGYDIVVSTPLRLVALVREGAVSLVSVEMVVLDEADKLFDAGTVGGSNDKAFVGQVDEVLAACSNEQVQRALFSATIGQQMKELAKSVLRDPIFLTVGTDNAGAADIDQRLVYVGKEEGKLLAIRQLVQEGLRPPVLVFLQSKDRAKELFHELVYDGINTDVMHASRTQDQRDDIIQRFRTGEIWVLICTDLMARGIDFKGVNMVINYDFPQSAVSYIHRIGRTGRAGRHGVAVTLFTESDMDYLRSIANVMRLSGCEVPDWMLTMKKERRSDRRKREQGAPRRDQIGTVSKYDVRQKRR 600
            TG++   S   +E+   RR++GI+  G  V  P+ SF DM    P   A+Q +R +L+N+E S +KEPT VQMQA+P  +  RD+LA APTGSGKTAAF +P++  L      A +SG+R ++LAPTR+LA QI  +  RL+ G+KL + LL+KA +A  A+ T   SK A++ +D++++TPLRLV L++E  V L +VEMV LDEAD+L + G         FV QVDE+ AAC++ +VQRA+FSAT+ + ++ELA++VLRDP+ + VGT NAGA+ IDQ LV+VGKEEGKL+A++QL+ EGL+ P L+F+Q+K+RA EL+HEL+YDG+N   +HA RT++QRDD+I+RFRTGE+WVLICTDLM+RG+DFK VNMVINYDFPQSAVSYIHRIG          AVT FTE DM YLR+IANVM++SGCEVPDWML++KK   S R++  +  P R +I TVS YD+++  R
Sbjct:  196 TGKKNPASAEQDEVQMLRRQLGIRVSGVSVPAPITSFADM-RLDPSASAQQMKRHLLQNIERSEYKEPTSVQMQAIPSFLLRRDVLATAPTGSGKTAAFAIPILGNLAA--GSATSSGIRSIVLAPTRDLAVQIRAEFTRLAAGKKLHITLLSKATAATIASQT--KSKLAVN-HDVLIATPLRLVHLIQEAKVDLSTVEMVCLDEADRLLELG---------FVEQVDEIFAACTHAKVQRAMFSATMLEGVEELAQTVLRDPVKVAVGTKNAGASTIDQELVFVGKEEGKLVAMKQLLHEGLQLPALLFVQNKERANELYHELLYDGVNIGAVHADRTKEQRDDVIRRFRTGEVWVLICTDLMSRGMDFKAVNMVINYDFPQSAVSYIHRIGXXXXXXXXXKAVTFFTEDDMVYLRTIANVMKISGCEVPDWMLSLKKASVSKRKELLKAPPTRHRINTVSGYDLQKANR 652          
BLAST of mRNA_C-linearis_contig9.16527.1 vs. uniprot
Match: A0A024TW13_9STRA (RNA helicase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TW13_9STRA)

HSP 1 Score: 476 bits (1224), Expect = 1.770e-157
Identity = 251/471 (53.29%), Postives = 338/471 (71.76%), Query Frame = 0
Query:  134 ARSVRVEEIACFRRRMGIKARGEEVADPMESFGDMPAAGPGDDARQTRRVILRNVEESAWKEPTPVQMQAVPILVAGRDLLAAAPTGSGKTAAFVMPMILRLGVQRACAEASGVRGLLLAPTRELAAQIHRDVVRLSRGRKLRVCLLTKAGSAKAAAATGMDSKKALSGYDIVVSTPLRLVALVREGAVSLVSVEMVVLDEADKLFDAGTVGGSNDKAFVGQVDEVLAACSNEQVQRALFSATIGQQMKELAKSVLRDPIFLTVGTDNAGAADIDQRLVYVGKEEGKLLAIRQLVQEGLRPPVLVFLQSKDRAKELFHELVYDGINTDVMHASRTQDQRDDIIQRFRTGEIWVLICTDLMARGIDFKGVNMVINYDFPQSAVSYIHRIGRTGRAGRHGVAVTLFTESDMDYLRSIANVMRLSGCEVPDWMLTMKKERRSDRRKREQGAPRRDQIGTVSKYDVRQKRRRQFM 604
            ++S   ++I   RRR+ I   G  V DP+  F  M       +A   + V+LRN+EES +K PTP+QMQ++P ++  RD+L  APTGSGKTAAF +PM+L LG      +  G+R ++L PTRELA QIH +  RLS GRK  + LL+KA     AA     SK     YDIV++TPLRLV L+ +  V+L +V+M+ LDEAD+LF+ G         FV Q+D++ AAC+N ++QR +FSAT+ Q ++E+A+SVL+DPI +++GT NAGA+ I Q+L++VGKEEGKL+A++QL+QEGL+ PVL+F+Q+KDRAKEL+ ELVYDGIN   +HA RT++QRD +I+ FRTG +WVLICTDLM+RGIDFKGVNMVIN+DFPQSAVSYIHRIGR       G AVT FTE+DM YLR+IANVM+LSGC+VP WML +KK     R++  +  P R +I TVS YD+++  +R+ M
Sbjct:  187 SKSSHSDDIKALRRRLNIYVEGTVVPDPILEFAQMKT-----NATALKAVVLRNIEESQYKNPTPIQMQSIPAILKQRDVLGIAPTGSGKTAAFAIPMLLNLGAP----DVRGIRSVVLVPTRELAVQIHAEFQRLSVGRKFHIVLLSKAS----AATISSHSKTCTVNYDIVIATPLRLVHLIHKENVTLDTVDMICLDEADRLFEMG---------FVEQIDDIFAACTNPKMQRMMFSATMLQGVEEMAQSVLKDPIKISIGTKNAGASTITQKLMFVGKEEGKLVAMKQLIQEGLKLPVLLFVQNKDRAKELYQELVYDGINVGAIHADRTKEQRDKVIKDFRTGVVWVLICTDLMSRGIDFKGVNMVINFDFPQSAVSYIHRIGRXXXXXXPGEAVTFFTENDMVYLRTIANVMKLSGCDVPPWMLNLKKASMRKRKQLLKAPPERHRIETVSGYDLQKANKRRLM 635          
BLAST of mRNA_C-linearis_contig9.16527.1 vs. uniprot
Match: A0A485LSG4_9STRA (RNA helicase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LSG4_9STRA)

HSP 1 Score: 475 bits (1223), Expect = 2.510e-157
Identity = 254/465 (54.62%), Postives = 332/465 (71.40%), Query Frame = 0
Query:  140 EEIACFRRRMGIKARGEEVADPMESFGDMPAAGPGDDARQTRRVILRNVEESAWKEPTPVQMQAVPILVAGRDLLAAAPTGSGKTAAFVMPMILRLGVQRACAEASGVRGLLLAPTRELAAQIHRDVVRLSRGRKLRVCLLTKAGSAKAAAATGMDSKKALSGYDIVVSTPLRLVALVREGAVSLVSVEMVVLDEADKLFDAGTVGGSNDKAFVGQVDEVLAACSNEQVQRALFSATIGQQMKELAKSVLRDPIFLTVGTDNAGAADIDQRLVYVGKEEGKLLAIRQLVQEGLRPPVLVFLQSKDRAKELFHELVYDGINTDVMHASRTQDQRDDIIQRFRTGEIWVLICTDLMARGIDFKGVNMVINYDFPQSAVSYIHRIGRTGRAGRHGVAVTLFTESDMDYLRSIANVMRLSGCEVPDWMLTMKKERRSDRRKREQGAPRRDQIGTVSKYDVRQKRRRQFM 604
            +++   RRR+ I  +G  V DP+  F  M  +     A   + V+LRN+E S +K PTP+QMQ++P ++ GRD+L  APTGSGKTAAF +PM+L L    A A+  G+R ++L PTRELA QIH +  RLS GRK  + LL+KA     AA     SK     YDIV++TPLRLV L+    V L  VEM+ LDEAD+LFD G         FV Q+D+V AAC+N  +QR +FSAT+ Q ++E+A+SVL+DPI +++G  NAGA  I QRL++VGKEEGKL+A++QL+QEGL+ PVL+F+Q+KDRAKEL+ ELVYDGIN   +HA RT++QRD +I+ FRTG +WVLICTDLM+RGIDFKGVNMVINYDFPQSAVSYIHRIG        G AVT FTESDM +LR+IANVM+LSGC+VPDWML +KK     R++  +  P+R +I TVS YD+++  +R+ M
Sbjct:  189 DDLKALRRRLNISVQGTVVPDPLLEFAHMKTS-----ATALKSVVLRNIEASQYKNPTPIQMQSIPAILKGRDVLGIAPTGSGKTAAFAIPMLLNL---EAPAQ-QGIRSVVLVPTRELAVQIHAEFQRLSAGRKFHIVLLSKAS----AATISSHSKNCTVNYDIVIATPLRLVHLITNDGVKLDQVEMICLDEADRLFDMG---------FVEQIDDVFAACTNPTMQRMMFSATMLQGVEEMAQSVLKDPIKVSIGVKNAGATTIKQRLMFVGKEEGKLVAMKQLIQEGLKLPVLLFVQNKDRAKELYQELVYDGINVGAIHADRTKEQRDKVIKDFRTGTVWVLICTDLMSRGIDFKGVNMVINYDFPQSAVSYIHRIGXXXXXXXXGEAVTFFTESDMVHLRTIANVMKLSGCDVPDWMLNLKKASIRQRKQLLKAPPQRYRIETVSGYDLQKANKRRLM 631          
BLAST of mRNA_C-linearis_contig9.16527.1 vs. uniprot
Match: L1J3V1_GUITC (RNA helicase n=2 Tax=Guillardia theta TaxID=55529 RepID=L1J3V1_GUITC)

HSP 1 Score: 468 bits (1205), Expect = 3.050e-157
Identity = 253/471 (53.72%), Postives = 338/471 (71.76%), Query Frame = 0
Query:  140 EEIACFRRRMGIKARGEEVADPMESFGDMPAAGPGDDARQTRRVILRNVEESAWKEPTPVQMQAVPILVAGRDLLAAAPTGSGKTAAFVMPMILRLGVQRACAEASGVRGLLLAPTRELAAQIHRDVVRLSRGRKLRVCLLTKAGSAKAAAATGMDSKKALSGYDIVVSTPLRLVALVREGAVSLVSVEMVVLDEADKLFDAGTVGGSNDKAFVGQVDEVLAACSNEQVQRALFSATIGQQMKELAKSVLRDPIFLTVGTDNAGAADIDQRLVYVGKEEGKLLAIRQLVQEGLRPPVLVFLQSKDRAKELFHELVYDGINTDVMHASRTQDQRDDIIQRFRTGEIWVLICTDLMARGIDFKGVNMVINYDFPQSAVSYIHRIGRTGRAGRHGVAVTLFTESDMDYLRSIANVMRLSGCEVPDWMLTMKKERRSDRRKREQGAPRRDQIGTVSKYDVRQKRRRQFMVNDSKK 610
            +EI  FRR+MGI   G+E+A P+ +F ++  +       + ++ +L  +E + WKEPTP+QMQA+PIL+  RDL+A APTGSGKT AFV+P+   L   +      G+RGL+++PTRELA QI      L    KL+V LLTKA +A + AA  MD +     +D+VVSTP RLV+L+++ ++ L SVE++++DEADKLF+ G         F+ Q+DE+LAACSN ++Q++LFSATI  Q++ELA+S++  P F+TVG+     + I Q+LV+VG EEGKL+AIRQL+Q GL+PPVL+F+QS DRAK+LF ELVYDGIN DVMHA RTQ QRD+II +FR+G IWVLICTDLMARGIDFKGVN+VINYDFPQS +SYIHRIGRTGR GR G AVT FT  D+ YLRSIANVM+ SGC+V DWML +KK  +   +  ++ AP R  I  V +   +Q++    M+  +KK
Sbjct:   11 DEIKTFRRQMGITVSGDEIAPPIGTFSEIKLS-------KEQKWLLHGIETAGWKEPTPIQMQAIPILLERRDLVACAPTGSGKTGAFVIPLFALLQAPKK----EGIRGLIVSPTRELATQIFNQCKLLKAFSKLQVKLLTKA-TAASVAALQMDPQA--RNHDVVVSTPARLVSLLQQKSLDLSSVELLIVDEADKLFEEG---------FITQLDEILAACSNRKLQKSLFSATIPPQIEELARSIMPHPTFVTVGSKVGANSKIKQKLVFVGSEEGKLIAIRQLIQTGLKPPVLMFVQSIDRAKQLFRELVYDGINVDVMHAERTQAQRDNIISQFRSGAIWVLICTDLMARGIDFKGVNLVINYDFPQSTISYIHRIGRTGRGGREGEAVTFFTGEDVLYLRSIANVMKQSGCDVADWMLQLKKPGKKKAKMLKKKAPERKDIVEVPRCFKQQRKXXXQMIEGTKK 458          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16527.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FR54_ECTSI3.060e-26086.73RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A6H5JCM6_9PHAE6.500e-22084.24RNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A2D4C2B4_PYTIN9.100e-16555.36RNA helicase (Fragment) n=1 Tax=Pythium insidiosum... [more]
A0A8K1CQ63_PYTOL1.160e-16253.75Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A225VXV3_9STRA6.890e-15953.93RNA helicase n=2 Tax=Phytophthora TaxID=4783 RepID... [more]
A0A1V9ZVZ5_9STRA3.380e-15853.36RNA helicase n=1 Tax=Thraustotheca clavata TaxID=7... [more]
A0A2P4XS83_9STRA4.430e-15854.24RNA helicase n=2 Tax=Phytophthora palmivora var. p... [more]
A0A024TW13_9STRA1.770e-15753.29RNA helicase n=1 Tax=Aphanomyces invadans TaxID=15... [more]
A0A485LSG4_9STRA2.510e-15754.62RNA helicase n=1 Tax=Aphanomyces stellatus TaxID=1... [more]
L1J3V1_GUITC3.050e-15753.72RNA helicase n=2 Tax=Guillardia theta TaxID=55529 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 192..410
e-value: 2.3E-40
score: 150.1
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 204..395
score: 24.668
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 444..528
e-value: 1.9E-32
score: 123.8
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 420..528
e-value: 6.6E-31
score: 106.9
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 406..567
score: 23.54
NoneNo IPR availableGENE3D3.40.50.300coord: 128..399
e-value: 7.3E-61
score: 207.5
NoneNo IPR availableGENE3D3.40.50.300coord: 403..613
e-value: 6.1E-51
score: 175.3
NoneNo IPR availablePANTHERPTHR24031:SF25ATP-DEPENDENT RNA HELICASE DDX46-RELATEDcoord: 152..552
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 152..552
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 197..384
e-value: 8.0E-35
score: 120.2
IPR000629ATP-dependent RNA helicase DEAD-box, conserved sitePROSITEPS00039DEAD_ATP_HELICASEcoord: 331..339
IPR014014RNA helicase, DEAD-box type, Q motifPROSITEPS51195Q_MOTIFcoord: 173..201
score: 6.595
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 246..548

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:1107757..1114233 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16527.1mRNA_C-linearis_contig9.16527.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig9 1107757..1114315 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig9.16527.1 ID=prot_C-linearis_contig9.16527.1|Name=mRNA_C-linearis_contig9.16527.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=618bp
MSSRELLEMLGSGAAFGKKAHQPSERRDAAKKPPSTINFFAAAAGGAPSS
SAGKKRRRAPNDGGKAKPSSAGTSQVLVSKATSKPAARASSKGKGGGSAL
ALFAPTPAASASAGKCNSSKGVVEGKVLTGERKARSVRVEEIACFRRRMG
IKARGEEVADPMESFGDMPAAGPGDDARQTRRVILRNVEESAWKEPTPVQ
MQAVPILVAGRDLLAAAPTGSGKTAAFVMPMILRLGVQRACAEASGVRGL
LLAPTRELAAQIHRDVVRLSRGRKLRVCLLTKAGSAKAAAATGMDSKKAL
SGYDIVVSTPLRLVALVREGAVSLVSVEMVVLDEADKLFDAGTVGGSNDK
AFVGQVDEVLAACSNEQVQRALFSATIGQQMKELAKSVLRDPIFLTVGTD
NAGAADIDQRLVYVGKEEGKLLAIRQLVQEGLRPPVLVFLQSKDRAKELF
HELVYDGINTDVMHASRTQDQRDDIIQRFRTGEIWVLICTDLMARGIDFK
GVNMVINYDFPQSAVSYIHRIGRTGRAGRHGVAVTLFTESDMDYLRSIAN
VMRLSGCEVPDWMLTMKKERRSDRRKREQGAPRRDQIGTVSKYDVRQKRR
RQFMVNDSKKAAALGNN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR001650Helicase_C
IPR011545DEAD/DEAH_box_helicase_dom
IPR000629RNA-helicase_DEAD-box_CS
IPR014014RNA_helicase_DEAD_Q_motif
IPR027417P-loop_NTPase