mRNA_C-linearis_contig89.16435.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig89.16435.1
Unique NamemRNA_C-linearis_contig89.16435.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig89.16435.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI)

HSP 1 Score: 653 bits (1684), Expect = 3.450e-231
Identity = 360/510 (70.59%), Postives = 380/510 (74.51%), Query Frame = 1
Query:    1 MLDDEFVAITTDGWTSRSNESYMSLTVAYIDSEWKLHHLSLDCTKRTGTTTGENLAALVAGMIERHDLTGRVTACVTDCEPSMIKAGRLLEVGGGTISHIGCSNHRMESTTSSVFNGRSLGALGLARTLVGRYKKSSQMAARLGQLCGTLKIEALSVMQDVETRWWSTWAMIVRLLYVMRKPIALHESVEGVHPLLSDTDWEVLRLIEPILQAFMKAQKDLEGAQYVTGSMTIAKAAELREGLEAAVNDFEAVAQQELKENTQKAMEL-----------------------------RRQPQGFKLKQVFATALDPRAKHLYGIQQQEHAGVWRAVASAAXXXXXXXXXXXXXXXXXXXX------------------------------------------------EKREQLVAIVDMEVSAFMASPGIRVWDMEIIKGEEKKVFNNPLGWWRKKQLDYPLLSALARRVLAIPSSQAQSERMFSTAGLIVTPRRSRLLDENVELLVYL 1299
            MLD EFVAITTDGWTSR+NESYMSLTVAYID EWKLHHLSLDC K TGTTTGE+LAALVAGM+ERHDLTGRV ACVTDCEPSMIKAGRLLEV G TISHIGCSNHRMESTTSSVFNGRSLGALGLARTLVGRYKKSSQMAARL QLCG L++E LSVMQDVETRWWSTWAM+VRLLY+M K I LHES++ VHPLLSDTDWEVLRLIEPIL+ FMKAQKDLEGAQYVTGSMTI K AELREGLEAA+ D +AVAQQ LKE TQKAME                              RRQPQGFK KQV+ATALDPRAKHLYGIQQ+EHAGVWRAVASAA                                                                    EKREQLVAIVDMEVSAF A+PGIRVWDM+     +KKVFNNPL  WRKKQL+YPLL+ALARRVLAIPSSQAQSER+FSTAGL VTP RSRLLDENVELLVYL
Sbjct:   35 MLDAEFVAITTDGWTSRNNESYMSLTVAYIDYEWKLHHLSLDCAKHTGTTTGEDLAALVAGMVERHDLTGRVIACVTDCEPSMIKAGRLLEVDGSTISHIGCSNHRMESTTSSVFNGRSLGALGLARTLVGRYKKSSQMAARLVQLCGILQMEPLSVMQDVETRWWSTWAMVVRLLYLM-KAIKLHESMDEVHPLLSDTDWEVLRLIEPILRPFMKAQKDLEGAQYVTGSMTIGKMAELREGLEAAITDLKAVAQQGLKETTQKAMEAVRPDAEALMADFTNRWGDGSNILEYREGKRRQPQGFKRKQVYATALDPRAKHLYGIQQREHAGVWRAVASAAVDIALGKHAGDKAPASAEKPASDPVQTQPAPLGGGQGASKRPRMSAFEAAAAXXXXXXXXXXXXXSADEKREQLVAIVDMEVSAFKAAPGIRVWDMQKTNTGDKKVFNNPLDRWRKKQLEYPLLAALARRVLAIPSSQAQSERVFSTAGLTVTPTRSRLLDENVELLVYL 543          
BLAST of mRNA_C-linearis_contig89.16435.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE)

HSP 1 Score: 498 bits (1283), Expect = 1.260e-170
Identity = 272/483 (56.31%), Postives = 322/483 (66.67%), Query Frame = 1
Query:    1 MLDDEFVAITTDGWTSRSNESYMSLTVAYIDSEWKLHHLSLDCTKRTGTTTGENLAALVAGMIERHDLTGRVTACVTDCEPSMIKAGRLLEVGGGTISHIGCSNHRMESTTSSVFNGRSLGALGLARTLVGRYKKSSQMAARLGQLCGTLKIEALSVMQDVETRWWSTWAMIVRLLYVMRKPIALHESVEGVHPLLSDTDWEVLRLIEPILQAFMKAQKDLEGAQYVTGSMTIAKAAELREGLEAAVNDFEAVAQQELKENTQKAMEL-----------------------------RRQPQGFKLKQVFATALDPRAKHLYGIQQQEHAGVWRAVASAAXXXXXXXXXXXXXXXXXXXX-----------------------------------------------EKREQLVAIVDMEVSAFMASPGIRVWDMEIIKGEEKKVFNNPLGWWRKKQLDYPLLSALARRVLAIPSSQAQSERM 1221
            MLDDE+VAITTDGWTSRSNESYMSLTVAYID  W+LHHLSL+CTK TG+T GE+LA  +  MIERH LTGRVTACVTDCEPSM+KAGRLLEVGG  + HIGCSNHRMESTTSSVFNG+SLGAL  AR +VGRYK+SSQM+ RL    G LK+  LSV+QDVETRWWS+WAMI RLLY+M K I LHES + + P+LS+TDWEVLRLIEPIL+ FM+AQKDLEGA+YVTGSMT+ K  ELR GLEAA+ D  A  +  +  +T++AME                              RRQPQGFKL+QV ATA+DPRAKHLYGI+Q EHA VWRAVA+ A                                                                   EKREQL ++VD+EV++F  +PGI +W       + KKV+N+PL WWR +Q+++P L+ALARRVLAIPSSQA SER+
Sbjct:   71 MLDDEYVAITTDGWTSRSNESYMSLTVAYIDVGWQLHHLSLNCTKHTGSTHGEDLAREITSMIERHGLTGRVTACVTDCEPSMVKAGRLLEVGGSNLEHIGCSNHRMESTTSSVFNGKSLGALAKARAVVGRYKRSSQMSGRLAVFIGILKLSPLSVLQDVETRWWSSWAMIERLLYLM-KAIKLHESTDNIAPVLSETDWEVLRLIEPILRPFMQAQKDLEGAKYVTGSMTVPKIGELRNGLEAAIADLRATDRFGISASTREAMEAVLPDAEALWEDFLNRWGDGSSILEYREGKRRQPQGFKLQQVCATAVDPRAKHLYGIRQAEHASVWRAVATKAVDIAAEKFSSDNTATSGSAPAAQPVGTPPVAPGGQGAPKRARLSAFEAAAAAHAGAAASSAGGQTLDEKREQLASVVDLEVASFQTTPGISIWYWGT---DGKKVYNDPLDWWRTRQMEFPHLAALARRVLAIPSSQAHSERV 549          
BLAST of mRNA_C-linearis_contig89.16435.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE)

HSP 1 Score: 298 bits (763), Expect = 4.820e-93
Identity = 187/448 (41.74%), Postives = 261/448 (58.26%), Query Frame = 1
Query:    4 LDDEFVAITTDGWTSRSNESYMSLTVAYIDSEWKLHHLSLDCTKRTGTTTGENLAALVAGMIERHDLTGRVTACVTDCEPSMIKAGRLLEVGGGTISHIGCSNHRMESTTSSVFNGRSLG-ALGLARTLVGRYKKSSQMAARLGQLCGTLKIEALSVMQDVETRWWSTWAMIVRLLYVMRKPIALHESVEGVHPLLSDTDWEVLRLIEPILQAFMKAQKDLEGAQYVTGSMTIAKAAELREGLEAAVNDFEAVA------QQELKENTQKAMELRR------QPQGFKLKQVFATALDPRAKHLYGIQQQEHAGVWRAVASAAXXXXXXXXXXXXXXXXXXXXEKREQLVAIVDMEVSAFMASPGIRVWDM---EIIKGEEKKVFNNPLGWWRKKQLDYPLLSALARRVLAIPSSQAQSERMFSTAGLIVTPRRSRLLDENVELLVYL 1299
            L  E VA+T+DGWTS SN++YM  T  YI S + L  L ++C K  G TTGE+L   V  MI R+ LT R  A  TDCEPSM+KAGRLLE   G ++H+GC  HR+ES TS  F G  +  AL LAR +V RY  SSQ + RL Q+   +++E   V+QDVETRWWST+A I RLL  +R+PI  HE ++ + PLL + DWEVL+++EP+ + F+ +QK  E ++ VT S+ I   A+LR+ L+ AV   +A A        E K++   A +  R      +P+GFK KQV ATALDPR+K LYGI++ EH+ VW AVA+ A                    +      +++ +E +A          D      + G++++  N                S+   RVL IP+SQ QSER+FS+AGL+VT  R+R+  ENVEL+++L
Sbjct:   45 LTGEHVAVTSDGWTSASNDTYMYFTCTYISSNFDLVALCVECKKHGGRTTGEDLVEAVKAMIARNGLTSRTVATTTDCEPSMVKAGRLLEENEG-VTHLGCFCHRLESITSQAFGGPGVSKALALARRVVTRYNMSSQASDRLEQMRDIVQVERKKVVQDVETRWWSTYASICRLLS-LRRPITEHERIDSIPPLLKEKDWEVLQVVEPLSKPFILSQKHREASKDVTVSLVIPYIADLRDELDEAVERLQAHACPAESIVAEAKKDVFFAPKHVRPTSVIVEPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVAIEAKATEDT-------QSAGASSSLIPVEPAAXXXXXXXXXXDFAAASAVPGDKQQSAN---------------ASSSTSRVLCIPASQPQSERVFSSAGLVVTKTRARMDPENVELMLFL 468          
BLAST of mRNA_C-linearis_contig89.16435.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE)

HSP 1 Score: 303 bits (776), Expect = 1.490e-90
Identity = 213/544 (39.15%), Postives = 282/544 (51.84%), Query Frame = 1
Query:   13 EFVAITTDGWTSRSNESYMSLTVAYIDSEWKLHHLSLDCTKRTGTTTGENLAALVAGMIERHDLTGRVTACVTDCEPSMIKAGRLLEVGGGTISHIGCSNHRMESTTSSVFNGRSLG-ALGLARTLVGRYKKSSQMAARLGQLCGTLKIEALSVMQDVETRWWSTWAMIVRLLYVMRKPIALHESVEGVHPLLSDTDWEVLRLIEPILQAFMKAQKDLEGAQYVTGSMTIAKAAELREGLEAAVNDFEA-------VAQQELKENTQKAMEL---------------------RRQPQGFKLKQVFATALDPRAKHLYGIQQQEHAGVWRAVASAAXXXXXXXXXXXXXXXXXXXXEK-------------------------------------------------------------------------------------REQLVAIVDMEVSAFMASPGIRV-WDMEIIKGEEKKVFNNPLGWWRKKQLDYPLLSALARRVLAIPSSQAQSERMFSTAGLIVTPRRSRLLDENVELLVYL 1299
            E VA+T+DGWT  SN++YMS T  YI S + L  L L+C K    T GE+L   V  MI R+ LTGR  A  TDCE SM+KAGRLLE   G ++H+GC  HR+ES TS  F G  +  AL LAR +V RY  SSQ + RL Q+C  +++E  +V+QDVETRWWST+  I RL+  +R+PI  HE ++   PLL + DWEVL+L+E +L+ FM AQK LE ++ VT  +     A+L++GL+ AV   +A       +  +  K+    A  L                     RRQP+GFK +QV ATAL PR+K LYGI++ EH+ VW A A+ A            XXXXXXXX                                                                                       R Q+ +I+  EV AF  +PG+ V W+    KG+E  V   PL WWR K  +YP L++LARRVL IP+ QAQSER+FS+AGL+VT  R+R+  ENV L+V+L
Sbjct:    4 EHVALTSDGWTPASNDTYMSFTCTYISSNFDLVALCLECKKHGWRTAGEDLVEAVKAMIARNGLTGRTVAITTDCELSMVKAGRLLEENEG-VTHLGCFCHRLESITSQAFGGPGVSKALALARGVVTRYTISSQASDRLEQVCDIVQVERKNVVQDVETRWWSTYVSICRLIS-LRRPITEHEIIDSTPPLLKEKDWEVLQLVESLLKPFMTAQKHLEASKEVTVRLVSPYIADLQDGLDEAVERLQAHSCPAESIVAEAKKDVILCAQALQTDLSRRWGDRTDVLVYTEGPRRQPRGFKKEQVLATALGPRSKSLYGIEETEHSDVWDAGANEAVKVAIEAKATEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQSAGASSSPIPVEPAXXXXXXXXXXXXXXXXXXAHGDKQQSANASSSPLRRQMESIISREVDAFKITPGLAVSWEE---KGQE--VRGKPLEWWRVKAREYPKLASLARRVLCIPAFQAQSERVFSSAGLVVTKTRARMDPENVGLMVFL 540          
BLAST of mRNA_C-linearis_contig89.16435.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE)

HSP 1 Score: 233 bits (594), Expect = 4.560e-69
Identity = 141/325 (43.38%), Postives = 186/325 (57.23%), Query Frame = 1
Query:   46 SRSNESYMSLTVAYIDSEWKLHHLSLDCTKRTGTTTGENLAALVAGMIERHDLTGRVTACVTDCEPSMIKAGRLLEVGGGTISHIGCSNHRMESTTSSVFNGRSLG-ALGLARTLVGRYKKSSQMAARLGQLCGTLKIEALSVMQDVETRWWSTWAMIVRLLYVMRKPIALHESVEGVHPLLSDTDWEVLRLIEPILQAFMKAQKDLEGAQYVTGSMTIAKAAELREGLEAAVNDFEAVA---------------------QQELKENTQKAMEL-------RRQPQGFKLKQVFATALDPRAKHLYGIQQQEHAGVWRAVASAA 933
            S SN++YM+ T  YI S + L  L L+  K  G TTGE+L   V  MI R+ LTGR  A  TDCEP M+KAGRLLE   G +SH+GC  HR ES TS  F G  +  AL L R +V RY  SSQ + RL Q+C  +++E   V+QDVETRWWST                    ++ + PLL++ DWEVL+L+EP+L  FM AQK LE ++ VT S+  A  A+LR+ L+ A+   +A +                     Q +L    +   ++       RRQP+GFK KQV ATALDPR+K LYGI++ EH+ VW AVA+ A
Sbjct:    3 SASNDTYMTFTCTYISSNFDLVALCLEYKKHGGRTTGEDLVEAVKAMIARNGLTGRTVATTTDCEPFMVKAGRLLEENEG-VSHLGCFCHRFESITSQAFGGPGVSKALALPRGVVTRYTMSSQASNRLEQMCDIVQVERKKVVQDVETRWWST-----------------PREIDSIPPLLNEKDWEVLQLVEPLLHPFMTAQKHLEASKGVTVSLVTAYIADLRDELDEAIERLQAYSCPAESIVAEAKKDILRCAPALQTDLSRRWRDGTDVLVYTEGPRRQPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEA 309          
BLAST of mRNA_C-linearis_contig89.16435.1 vs. uniprot
Match: A0A6H5L7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y8_9PHAE)

HSP 1 Score: 182 bits (463), Expect = 5.090e-47
Identity = 128/314 (40.76%), Postives = 174/314 (55.41%), Query Frame = 1
Query:    1 MLDDEFVAITTDGWTSRSNESYMSLTVAYIDSEWKLHHLSLDCTKRTGTTTGENLAALVAGMIERHDLTGRVTACVTDCEPSMIKAGRLLEVGGGTIS-HIGCSNHRMESTTSSVFNG-RSLGALGLARTLVGRYKKSSQMAARLGQLCGT-LKIEALSVMQDVETRWWSTWAMIVRLLYVMRKPIALHESVEGVHPLLSDTDWEVLRLIEPILQAFMKAQKDLEGAQYVTGSMTIAKAAELREGLEAAVNDFEAVAQQELKENTQKAMELRRQPQGFKLKQVFATALDPRAKHLYGIQQQEHAGVWRAVASAA 933
            +++ E V IT+DGWTS +N++YMSLT   I S WKL  LS+DC+K  GTTTG+ LAA +   + +H LTG+VTA  TDCEPSM+K GRLL  G  T+S  IGC N+R+EST+S VFNG R    + LAR LV RY  SSQ A RL Q   T L ++   V+QDV T      +++V  +Y +R   +L ++++ +  L  D+D  V      ++   +KA +D    ++  G   +      +EG                          RRQP GFK   V ATALDPR K  YG+ + E A VW+ V   A
Sbjct:   35 LIEGEQVCITSDGWTSCANDTYMSLTFTLITSAWKLVTLSVDCSKSEGTTTGDALAAGIKATVAKHGLTGKVTAVTTDCEPSMVKMGRLL-AGDATVSTQIGCCNYRLESTSSIVFNGPRVKKVMVLARGLVTRYPTSSQAADRLKQFVKTYLGVDNKRVIQDVVTG-----SLVVPFIYDLRN--SLEDAIDDLVELPPDSDANVNTAWAAVMPC-IKALRDDYIDRWGDGHNILI----YKEGP-------------------------RRQPGGFKPVHVLATALDPRTKIPYGVDEDEKADVWKLVQEEA 310          
BLAST of mRNA_C-linearis_contig89.16435.1 vs. uniprot
Match: UPI00148F95E3 (zinc finger BED domain-containing protein 1-like n=1 Tax=Notolabrus celidotus TaxID=1203425 RepID=UPI00148F95E3)

HSP 1 Score: 140 bits (354), Expect = 8.170e-33
Identity = 124/450 (27.56%), Postives = 200/450 (44.44%), Query Frame = 1
Query:   19 VAITTDGWTSRSNESYMSLTVAYIDSEWKLHHLSLDCTKRTGTTTGENLAALVAGMIERHDLT-GRVTACVTDCEPSMIKAGRLLEVGGGTISHIGCSNHRMESTTSSVFNGRSLG-ALGLARTLVGRYKKSSQMAARLGQLCGTLKIEALSVMQDVETRWWSTWAMIVRLLYVMRKPIA-------LHESVEGVHPLLSDTDWEVLRLIEPILQAFMKAQKDLEGAQYVTGSMTIAKAAELREGLE-----AAVNDFEAVAQQELKENTQKAMELRRQPQGFKLKQVFATALDPRAKHLYGIQQQEHAGVWRAVASAAXXXXXXXXXXXXXXXXXXXXEKR-EQLVAIVDMEVSAFMASPGIRVWDMEIIKGEEKKVFN--------NPLGWWRKKQLDYPLLSALARRVLAIPSSQAQSERMFSTAGLIVTPRRSRLLDENVELLVYL 1299
            +A+T D WTS + E+Y+ +T  +I  +W+L  L L         TG N+AA +   + R +++  ++ A V D   +++ A  +L+   G +S I C+ H ++   +       +  ALG AR LV  ++KS   A +L      +      ++QDV TRW ST+ M+ RLL   R P+        + +S +    L +D  W +L  +   LQAF  A   L G  YVT S        L +  +     A V  F+  A  E+       + +          Q+ ATALDPR + L  +  +E  GV R V + A                          L  ++  + S    S   +  D + +  E    F         +PL WW+  +  YP L++LA+  L IP++   SER+FS AG I + +R+ L  E+V++L +L
Sbjct:  163 IALTADAWTSVATEAYLGITCHFISDDWELTTLCLTTMPLEERHTGPNIAAWIEQAVARFEISPSKIVAIVHDNGSNIVLAANILQEKHGWMS-IRCAGHTLQLVINHALKQPQITKALGAARCLVEHFRKSELAATKLKTKQKQMGTPEHKLVQDVSTRWNSTFYMVTRLLE-QRWPLTATLSDPTVTQSGKRYLDLKAD-QWALLEELAKALQAFECATVYLSGESYVTVSALPPLVRGLLKSTQTTYDTAPVQAFQTAASDEITARWSTEVTVTSDNPSS---QIIATALDPRFRKLKFLTPEERFGVQRKVQTLALQSMQGTVRKQHASENDQAIASAVSALDTLLGCDSSTDTDSENEQDADNQAVTNEVLMYFGEQPLSKTESPLSWWKSNEARYPTLASLAKSFLCIPATSTPSERLFSAAGNITSKKRASLTPEHVDMLTFL 606          
BLAST of mRNA_C-linearis_contig89.16435.1 vs. uniprot
Match: UPI0019556103 (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Pimephales promelas TaxID=90988 RepID=UPI0019556103)

HSP 1 Score: 139 bits (350), Expect = 1.210e-32
Identity = 118/457 (25.82%), Postives = 205/457 (44.86%), Query Frame = 1
Query:   13 EFVAITTDGWTSRSNESYMSLTVAYIDSEWKLHHLSLDCTKRTGTTTGENLAALVAGMIERHDLTGRVTACVTD-------CEPSMIKAGRLLEVGGGTISHIGCSNHRMESTTSSVFNGRSL-GALGLARTLVGRYKKSSQMAARLGQLCGTLKIEALSVMQDVETRWWSTWAMIVRLLY-------VMRKPIALHESVEGVHPLLSDTDWEVLRLIEPILQAFMKAQKDLEGAQYVTGSMTIAKAAELREGLEAAVNDFEAVAQQ---ELKENTQKAMELRRQPQGFKLKQVFATALDPRAKHLYGIQQQEHAGVWRAVASAAXXXXXXXXXXXXXXXXXXXXEKREQ-------LVAIVDMEVSAFMASPGIRVWDMEIIKG---EEKKVFNNPLGWWRKKQLDYPLLSALARRVLAIPSSQAQSERMFSTAGLIVTPRRSRLLDENVELLVYL 1299
            E +++TTD WTS   ESYM++T  +ID +WK   L L+  +     TG N+AA ++ + +   + G++ + V D       C  ++ ++ +  E+ G     + C+ H ++   ++      +  A+  +R LVG +KK  +    L Q      +    ++QDV TRW ST++M+ RLL        V+  P    +S       L+   W  +  I+ +L+      + L      + S T+   A L++   A  +D   + ++   +L E      E + +        + A  +DPR K L  +   +    +  VA  A                     K+++        + + + E        G R    E +K    +  K+ + PLGWW+K Q  YP L+ +A+R+L IP++   SER+FS AG IV   RS LL +NV++LV+L
Sbjct:   54 EALSLTTDMWTSLRMESYMTVTAHFIDGDWKAQSLVLETKQMEEAHTGINIAARLSEVADTFGIQGKIVSVVCDNAANMTLCVETLKESHKWAEMQG-----VRCAGHTLQLCINAALKQDPICRAVAASRHLVGHFKKGHKAKTGLKQKQEQQNVPQHELIQDVSTRWNSTFSMLERLLEQRWPITAVLSDPNFTKKSDSSTLD-LTTAHWNAIEDIKNVLKPMTTLTELLSEEDNASLSATVPMLANLKKRHLAIADDDSPITKKMKSKLVEEIDGRWEFKNRMMMTNSVYITAAVVDPRFKQLSFLDDAKRDEAYIVVAQLAERLNAVTGTGEPGSEEEQHVSKKQKNDKEKEIAMLLCEDEDDLISRESGGRSRVTEEMKNYLQDRTKIDSGPLGWWKKNQDRYPSLARVAKRLLCIPATSTPSERIFSKAGFIVNKARSCLLPKNVDMLVFL 504          
BLAST of mRNA_C-linearis_contig89.16435.1 vs. uniprot
Match: A0A671UN90_SPAAU (Dimer_Tnp_hAT domain-containing protein n=3 Tax=Sparus aurata TaxID=8175 RepID=A0A671UN90_SPAAU)

HSP 1 Score: 139 bits (349), Expect = 1.980e-32
Identity = 128/460 (27.83%), Postives = 196/460 (42.61%), Query Frame = 1
Query:   19 VAITTDGWTSRSNESYMSLTVAYIDSEWKLHHLSLDCTKRTGTTTGENLAALVAGMIERHDL-TGRVTACVTDCEPSMIKAGRLLEVGGGTISHIGCSNHRMESTTSSVFNGRSLG-ALGLARTLVGRYKKSSQMAARLGQLCGTLKIEALSVMQDVETRWWSTWAMIVRLLYVMRKPIALHESVEGVHPL------LSDTDWEVLRLIEPILQAFMKAQKDLEGAQYVTGSMTIAKAAELREGLE-----AAVNDFEAVAQQELKENTQKAMELRRQPQGFKLKQVFATALDPRAKHLYGIQQQEHAGVWRAVASAAXXXXXXXXXXXXXXXXXXXXEKREQLVAIV-------------------DMEVSAFMASPGIRVWDMEIIKGEEK-KVFNNPLGWWRKKQLDYPLLSALARRVLAIPSSQAQSERMFSTAGLIVTPRRSRLLDENVELLVYL 1299
            +A+T D WTS + E+Y+ +T  +I  +W+L    L         TG N+AA +   I R  +    + A V D   +++ A  +L+   G  S + C+ H ++   S       +  ALG AR LV  +K+S   +++L      + I    ++QDV TRW ST+ M+ RLL   R P+    S   V P       L    W +L  +   LQAF  A   L G  YVT S        L++  +     A V  F+A A QE      + + ++         Q+ A ALDPR + L  +  +E   V   V S A                    E  E +                       D E +   A       ++ +  GE       NPL WW+  +  YP L++LAR  L IP++   SER+FS AG I + +R+ L+ E+V++L +L
Sbjct:   82 IALTADAWTSVATEAYLGITCHFISDDWELTSFCLTTMPLEERHTGVNIAAWIEHAIARFQVPASNIVAVVHDNGSNVVLAANILKEKRGWNS-VCCAGHTLQLVISHALKHPQITKALGAARCLVEHFKRSELASSKLKTKQKQMGIPEKKLIQDVSTRWNSTFHMVTRLLE-QRWPLTATLSDPTVTPRGKQHLDLKPDQWALLEELAKALQAFESATVYLSGETYVTVSALPPLVRGLQKSTQTTYETAPVQAFQAAASQETTACWSREVTVKDDSPDT---QIIAAALDPRFRKLKFLTPEERFSVQSKVQSLASQSMQEETAKKQCAT-----ENEESITCFKRTSNGSLDSLFGCDSSTDSDSETAEQYAQNQAITNEVLMYFGEHPLSKTENPLSWWKSNEAKYPSLASLARSFLCIPATSTPSERLFSAAGNITSKKRASLIPEHVDMLTFL 531          
BLAST of mRNA_C-linearis_contig89.16435.1 vs. uniprot
Match: A0A668ALH7_9TELE (BED-type domain-containing protein n=1 Tax=Myripristis murdjan TaxID=586833 RepID=A0A668ALH7_9TELE)

HSP 1 Score: 139 bits (349), Expect = 4.870e-32
Identity = 136/460 (29.57%), Postives = 222/460 (48.26%), Query Frame = 1
Query:   13 EFVAITTDGWTSRSNESYMSLTVAYIDSEWKLHHLSLDCTKRTGTTTGENLAALVAGMIERHDLTGRVTACVTDCEPSMIKAGRLLEVGGGTISHIGCSNHRMESTTSSVFNGRSL-GALGLARTLVGRYKKSSQMAARLGQLCGTLKIEALSVMQDVETRWWSTWAMIVRLLYVMRKPIALHESVE-----GVHPLLSDTDW----EVLRLIEPILQAFMKAQKDLEGAQYVTGSMTIAKAAELREGLEAAVNDFEAVAQQELKENTQKAMELRRQPQGFKLKQVF--ATALDPRAKHLYGIQQQEHAGVWRAVASAAXXXXXXXXXXXXXXXXXXXXEKREQLVAIVDMEVSAFM---------------ASPGIRVWDMEIIKG----EEKKVFNNPLGWWRKKQLDYPLLSALARRVLAIPSSQAQSERMFSTAGLIVTPRRSRLLDENVELLVYL 1299
            E VA+TTD WTS + ESY+++T  +I  +W+L    L      G+ TG+N+ AL+       +L  +  A VTD   +M+ AG   E+      H+ C  H +   T   F   ++ G LG  R +VG +  S + A  L +    L + +  ++QDV TRW S++ M+ R L       A   S +     GV+ L+ D D+    ++++L+ P+    M   +D    +  T SM     A+L++  EA  +D ++V  +E+K+     +E R       L  +F  A ALDPR K L  +   +    + ++++ A                     K + ++ I+ +  SA M               A+  +R    + +K     E   + NNPL WW+++Q D PLLS+LA+R L IP++   SER+FSTAG IV+ +RS L  E+V+ L++L
Sbjct:  195 ERVALTTDAWTSCATESYVTITAHHITPDWQLKGHVLQTRVFKGSHTGKNIGALLKQACVDWNLLDKDPALVTDNASNMVIAGEEAEM----TPHLMCFAHTINLATQKAFKVNTVTGLLGRVRKVVGFFHHSVRAAEILQEKQKQLVLPSHKLIQDVSTRWNSSYDMLERFLEQQPAISAALLSRDLRKGGGVNTLM-DVDFGDGEDIVKLMAPVKLVTMTMSED----KRPTLSMISPVKAKLKKNFEA--SDKDSVVIREMKQAFSNDLEKRYTG----LDDLFYTAAALDPRFKSLPFLSDHDAERTFTSISAEAVSLHKKVSPSTHCNTHLL---KLKYILHILSVCQSAKMSALDELFGEDFEVRTAARSVRDKASDEVKRYRDRESLPLKNNPLQWWKEQQ-DLPLLSSLAKRYLCIPATSVASERVFSTAGDIVSTKRSLLKHEHVDQLIFL 635          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig89.16435.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCS5_ECTSI3.450e-23170.59Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ec... [more]
A0A6H5KUY5_9PHAE1.260e-17056.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJV8_9PHAE4.820e-9341.74Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JHP9_9PHAE1.490e-9039.15Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 13... [more]
A0A6H5KVI1_9PHAE4.560e-6943.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L7Y8_9PHAE5.090e-4740.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI00148F95E38.170e-3327.56zinc finger BED domain-containing protein 1-like n... [more]
UPI00195561031.210e-3225.82E3 SUMO-protein ligase ZBED1-like n=1 Tax=Pimephal... [more]
A0A671UN90_SPAAU1.980e-3227.83Dimer_Tnp_hAT domain-containing protein n=3 Tax=Sp... [more]
A0A668ALH7_9TELE4.870e-3229.57BED-type domain-containing protein n=1 Tax=Myripri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig89contigC-linearis_contig89:612897..614426 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score653.3
Seed ortholog evalue8e-185
Seed eggNOG ortholog2880.D7G5Z0
Hectar predicted targeting categoryother localisation
EggNOG free text desc.protein dimerization activity
EggNOG OGsKOG1121@1,KOG1121@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size1299
Cds size1299
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig89.16435.1prot_C-linearis_contig89.16435.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig89 612897..614426 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930698.0914686-CDS-C-linearis_contig89:612896..6132621622930698.0914686-CDS-C-linearis_contig89:612896..613262Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 612897..613262 -
1690881203.105199-CDS-C-linearis_contig89:612896..6132621690881203.105199-CDS-C-linearis_contig89:612896..613262Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 612897..613262 -
1622930698.1083128-CDS-C-linearis_contig89:613406..6135351622930698.1083128-CDS-C-linearis_contig89:613406..613535Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 613407..613535 -
1690881203.1172993-CDS-C-linearis_contig89:613406..6135351690881203.1172993-CDS-C-linearis_contig89:613406..613535Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 613407..613535 -
1622930698.1256475-CDS-C-linearis_contig89:613622..6144261622930698.1256475-CDS-C-linearis_contig89:613622..614426Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 613623..614426 -
1690881203.12896-CDS-C-linearis_contig89:613622..6144261690881203.12896-CDS-C-linearis_contig89:613622..614426Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 613623..614426 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig89.16435.1

>prot_C-linearis_contig89.16435.1 ID=prot_C-linearis_contig89.16435.1|Name=mRNA_C-linearis_contig89.16435.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=433bp
MLDDEFVAITTDGWTSRSNESYMSLTVAYIDSEWKLHHLSLDCTKRTGTT
TGENLAALVAGMIERHDLTGRVTACVTDCEPSMIKAGRLLEVGGGTISHI
GCSNHRMESTTSSVFNGRSLGALGLARTLVGRYKKSSQMAARLGQLCGTL
KIEALSVMQDVETRWWSTWAMIVRLLYVMRKPIALHESVEGVHPLLSDTD
WEVLRLIEPILQAFMKAQKDLEGAQYVTGSMTIAKAAELREGLEAAVNDF
EAVAQQELKENTQKAMELRRQPQGFKLKQVFATALDPRAKHLYGIQQQEH
AGVWRAVASAAAAAAAHAADAGDSGAGDSADEKREQLVAIVDMEVSAFMA
SPGIRVWDMEIIKGEEKKVFNNPLGWWRKKQLDYPLLSALARRVLAIPSS
QAQSERMFSTAGLIVTPRRSRLLDENVELLVYL
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mRNA from alignment at C-linearis_contig89:612897..614426-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig89.16435.1 ID=mRNA_C-linearis_contig89.16435.1|Name=mRNA_C-linearis_contig89.16435.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=1530bp|location=Sequence derived from alignment at C-linearis_contig89:612897..614426- (Chordaria linearis ClinC8C monoicous)
ATGCTGGATGACGAGTTCGTAGCGATCACCACGGACGGCTGGACATCTCG GAGCAACGAGTCCTACATGTCGCTGACCGTGGCCTATATCGACTCCGAGT GGAAGCTGCACCATCTTTCTCTGGACTGCACGAAGCGCACGGGGACAACC ACGGGCGAGAACTTGGCGGCGTTGGTGGCGGGAATGATTGAACGCCACGA CCTAACCGGTCGGGTGACTGCATGCGTCACCGATTGCGAGCCGTCTATGA TCAAGGCGGGTCGCCTGCTTGAGGTGGGCGGGGGTACGATTTCGCATATC GGCTGCTCCAACCACCGCATGGAGTCAACGACTTCATCGGTCTTCAACGG CAGGAGTCTTGGCGCCTTGGGCCTTGCGCGAACGCTAGTAGGACGCTACA AGAAGTCGAGTCAGATGGCGGCTCGCCTCGGCCAATTGTGCGGCACCCTC AAGATTGAAGCACTGTCCGTGATGCAAGACGTGGAGACGAGGTGGTGGTC GACATGGGCGATGATCGTGCGTCTGCTCTACGTCATGAGGAAGCCCATCG CGCTTCATGAGTCGGTGGAAGGCGTCCACCCGCTGTTGTCGGACACGGAC TGGGAGGTGCTGCGGCTGATCGAACCGATCCTGCAGGCGTTCATGAAGGC GCAGAAGGACCTGGAGGGGGCTCAGTACGTGACGGGTAGCATGACCATCG CGAAAGCGGCGGAATTGCGGGAAGGGCTTGAGGCCGCAGTCAACGACTTC GAGGCCGTTGCGCAACAGGAACTCAAAGAGAATACGCAGAAAGCGATGGA GCTCGTTCGTCCGGGTGCGGAAGCCCTGTTGGCGGACTTCACCAACCGCT GGGGCGACGGCTCCAAAATACTCGAGTACAAGGAGGGCAAGCGGCGCCAA CCGCAGGGATTCAAGCTGAAGCAGGTGTTCGCAACGGCCCTCGACCCGAG GGCCAAGCACCTTTACGGGATACAGCAGCAGGAGCACGCAGGCGTTTGGC GCGCTGTCGCTAGCGCCGCGGTGGACATTGCTCTGGGGAAGCACGCTAGC GACAAGGCACCCGCGTCCGCGGAGAAACCTGCTCCCGACCCCGTCCAGAC GCAGCGGGAACCACTCGGAGGAGGCCAGGGAGCCCCGAAGCGCCCTCGCT TGAGCGCGTTCGAGGCCGCCGCTGCTGCCCACGCTGCGGATGCAGGGGAC AGCGGTGCGGGCGATTCCGCGGATGAGAAACGCGAGCAACTGGTGGCCAT CGTGGACATGGAGGTCTCTGCCTTCATGGCTTCACCTGGGATACGGGTGT GGGACATGGAGATAATCAAGGGGGAAGAGAAGAAGGTCTTCAACAATCCC CTCGGCTGGTGGCGCAAGAAGCAATTGGACTACCCTCTGCTGTCGGCGCT GGCTCGTCGTGTGCTTGCCATTCCGTCATCTCAAGCACAATCCGAGCGCA TGTTTTCTACGGCAGGGCTAATCGTGACGCCTAGGCGGAGTCGCCTTTTA GACGAAAACGTCGAGCTCCTCGTGTACTTG
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Coding sequence (CDS) from alignment at C-linearis_contig89:612897..614426-

>mRNA_C-linearis_contig89.16435.1 ID=mRNA_C-linearis_contig89.16435.1|Name=mRNA_C-linearis_contig89.16435.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2598bp|location=Sequence derived from alignment at C-linearis_contig89:612897..614426- (Chordaria linearis ClinC8C monoicous)
ATGCTGGATGACGAGTTCGTAGCGATCACCACGGACGGCTGGACATCTCG
GAGCAACGAGTCCTACATGTCGCTGACCGTGGCCTATATCGACTCCGAGT
GGAAGCTGCACCATCTTTCTCTGGACTGCACGAAGCGCACGGGGACAACC
ACGGGCGAGAACTTGGCGGCGTTGGTGGCGGGAATGATTGAACGCCACGA
CCTAACCGGTCGGGTGACTGCATGCGTCACCGATTGCGAGCCGTCTATGA
TCAAGGCGGGTCGCCTGCTTGAGGTGGGCGGGGGTACGATTTCGCATATC
GGCTGCTCCAACCACCGCATGGAGTCAACGACTTCATCGGTCTTCAACGG
CAGGAGTCTTGGCGCCTTGGGCCTTGCGCGAACGCTAGTAGGACGCTACA
AGAAGTCGAGTCAGATGGCGGCTCGCCTCGGCCAATTGTGCGGCACCCTC
AAGATTGAAGCACTGTCCGTGATGCAAGACGTGGAGACGAGGTGGTGGTC
GACATGGGCGATGATCGTGCGTCTGCTCTACGTCATGAGGAAGCCCATCG
CGCTTCATGAGTCGGTGGAAGGCGTCCACCCGCTGTTGTCGGACACGGAC
TGGGAGGTGCTGCGGCTGATCGAACCGATCCTGCAGGCGTTCATGAAGGC
GCAGAAGGACCTGGAGGGGGCTCAGTACGTGACGGGTAGCATGACCATCG
CGAAAGCGGCGGAATTGCGGGAAGGGCTTGAGGCCGCAGTCAACGACTTC
GAGGCCGTTGCGCAACAGGAACTCAAAGAGAATACGCAGAAAGCGATGGA
GCTCATGCTGGATGACGAGTTCGTAGCGATCACCACGGACGGCTGGACAT
CTCGGAGCAACGAGTCCTACATGTCGCTGACCGTGGCCTATATCGACTCC
GAGTGGAAGCTGCACCATCTTTCTCTGGACTGCACGAAGCGCACGGGGAC
AACCACGGGCGAGAACTTGGCGGCGTTGGTGGCGGGAATGATTGAACGCC
ACGACCTAACCGGTCGGGTGACTGCATGCGTCACCGATTGCGAGCCGTCT
ATGATCAAGGCGGGTCGCCTGCTTGAGGTGGGCGGGGGTACGATTTCGCA
TATCGGCTGCTCCAACCACCGCATGGAGTCAACGACTTCATCGGTCTTCA
ACGGCAGGAGTCTTGGCGCCTTGGGCCTTGCGCGAACGCTAGTAGGACGC
TACAAGAAGTCGAGTCAGATGGCGGCTCGCCTCGGCCAATTGTGCGGCAC
CCTCAAGATTGAAGCACTGTCCGTGATGCAAGACGTGGAGACGAGGTGGT
GGTCGACATGGGCGATGATCGTGCGTCTGCTCTACGTCATGAGGAAGCCC
ATCGCGCTTCATGAGTCGGTGGAAGGCGTCCACCCGCTGTTGTCGGACAC
GGACTGGGAGGTGCTGCGGCTGATCGAACCGATCCTGCAGGCGTTCATGA
AGGCGCAGAAGGACCTGGAGGGGGCTCAGTACGTGACGGGTAGCATGACC
ATCGCGAAAGCGGCGGAATTGCGGGAAGGGCTTGAGGCCGCAGTCAACGA
CTTCGAGGCCGTTGCGCAACAGGAACTCAAAGAGAATACGCAGAAAGCGA
TGGAGCTCCGGCGCCAACCGCAGGGATTCAAGCTGAAGCAGGTGTTCGCA
ACGGCCCTCGACCCGAGGGCCAAGCACCTTTACGGGATACAGCAGCAGGA
GCACGCAGGCGTTTGGCGCGCTGTCGCTAGCGCCGCGCGGCGCCAACCGC
AGGGATTCAAGCTGAAGCAGGTGTTCGCAACGGCCCTCGACCCGAGGGCC
AAGCACCTTTACGGGATACAGCAGCAGGAGCACGCAGGCGTTTGGCGCGC
TGTCGCTAGCGCCGCGGCCGCCGCTGCTGCCCACGCTGCGGATGCAGGGG
ACAGCGGTGCGGGCGATTCCGCGGATGAGAAACGCGAGCAACTGGTGGCC
ATCGTGGACATGGAGGTCTCTGCCTTCATGGCTTCACCTGGGATACGGGT
GTGGGACATGGAGATAATCAAGGGGGAAGAGAAGAAGGTCTTCAACAATC
CCCTCGGCTGGTGGCGCAAGAAGCAATTGGACTACCCTCTGCTGTCGGCG
CTGGCTCGTCGTGTGCTTGCCATTCCGTCATCTCAAGCACAATCCGAGCG
CATGTTTTCTACGGCAGGGCTAATCGTGACGCCTAGGCGGAGTCGCCTTT
TAGACGAAAACGTCGAGCTCCTCGTGTACTTGGCCGCCGCTGCTGCCCAC
GCTGCGGATGCAGGGGACAGCGGTGCGGGCGATTCCGCGGATGAGAAACG
CGAGCAACTGGTGGCCATCGTGGACATGGAGGTCTCTGCCTTCATGGCTT
CACCTGGGATACGGGTGTGGGACATGGAGATAATCAAGGGGGAAGAGAAG
AAGGTCTTCAACAATCCCCTCGGCTGGTGGCGCAAGAAGCAATTGGACTA
CCCTCTGCTGTCGGCGCTGGCTCGTCGTGTGCTTGCCATTCCGTCATCTC
AAGCACAATCCGAGCGCATGTTTTCTACGGCAGGGCTAATCGTGACGCCT
AGGCGGAGTCGCCTTTTAGACGAAAACGTCGAGCTCCTCGTGTACTTG
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