mRNA_C-linearis_contig85.16158.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig85.16158.1
Unique NamemRNA_C-linearis_contig85.16158.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig85.16158.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE)

HSP 1 Score: 522 bits (1345), Expect = 7.540e-181
Identity = 269/397 (67.76%), Postives = 317/397 (79.85%), Query Frame = 1
Query:   28 IVENKHFVGMLQSLRPRIAVPHIRVCLENLRGMKKTLDQEVRRRLSSQHVAVTSDGWTSSHNDTYMSFTCSYITPNFDLEALCLECKKHDGRTTGEHLAEAVKAMIDRNDLKGRTVAITTDCEPSMVAAGRSLQEKEGITHVGCFCHRLESVTAQAFGGPGVSKAMALSRGLVTRYTMSSQAADRLQQMCDIVQIARKKVVQDVATRWASTYASVCRLLYLRRPITEHERIDSIAALLEEKDWEVLRLVEPLLKPFMTAQKHLEASKEVTASLVIPYIADLREDLDEAVADLTAQSCPPDSVLAKAKKDVLLCAEALQTDFSRRWGDGTDVLVYKEGPRRQPCGFRKEQVLATALDPRSKSLYGIDEDEQPGVWEEVAKAAVEVAMEVKAAEGKQSA 1218
            +VEN+HF+ M++ L+ R  VPH R+ LE LRGMKK LDQEV  RL+ +HVAVTSDGWTS+ NDTYM FTC+YI+ NFDL ALC+ECKKH GRTTGE L EAVKAMI RN L  RTVA TTDCEPSMV AGR L+E EG+TH+GCFCHRLES+T+QAFGGPGVSKA+AL+R +VTRY MSSQA+DRL+QM DIVQ+ RKKVVQDV TRW STYAS+CRLL LRRPITEHERIDSI  LL+EKDWEVL++VEPL KPF+ +QKH EASK+VT SLVIPYIADLR++LDEAV  L A +CP +S++A+AKKDV    + ++          T V+V       +P GF+K+QVLATALDPRSKSLYGI+E E   VWE VA  AV+VA+E KA E  QSA
Sbjct:    1 MVENEHFIEMVRFLKSRATVPHKRLFLEKLRGMKKGLDQEVLGRLTGEHVAVTSDGWTSASNDTYMYFTCTYISSNFDLVALCVECKKHGGRTTGEDLVEAVKAMIARNGLTSRTVATTTDCEPSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARRVVTRYNMSSQASDRLEQMRDIVQVERKKVVQDVETRWWSTYASICRLLSLRRPITEHERIDSIPPLLKEKDWEVLQVVEPLSKPFILSQKHREASKDVTVSLVIPYIADLRDELDEAVERLQAHACPAESIVAEAKKDVFFAPKHVRP---------TSVIV-------EPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVAIEAKATEDTQSA 381          
BLAST of mRNA_C-linearis_contig85.16158.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE)

HSP 1 Score: 524 bits (1350), Expect = 1.810e-175
Identity = 259/348 (74.43%), Postives = 296/348 (85.06%), Query Frame = 1
Query:  160 LSSQHVAVTSDGWTSSHNDTYMSFTCSYITPNFDLEALCLECKKHDGRTTGEHLAEAVKAMIDRNDLKGRTVAITTDCEPSMVAAGRSLQEKEGITHVGCFCHRLESVTAQAFGGPGVSKAMALSRGLVTRYTMSSQAADRLQQMCDIVQIARKKVVQDVATRWASTYASVCRLLYLRRPITEHERIDSIAALLEEKDWEVLRLVEPLLKPFMTAQKHLEASKEVTASLVIPYIADLREDLDEAVADLTAQSCPPDSVLAKAKKDVLLCAEALQTDFSRRWGDGTDVLVYKEGPRRQPCGFRKEQVLATALDPRSKSLYGIDEDEQPGVWEEVAKAAVEVAMEVKAAE 1203
            ++ +HVA+TSDGWT + NDTYMSFTC+YI+ NFDL ALCLECKKH  RT GE L EAVKAMI RN L GRTVAITTDCE SMV AGR L+E EG+TH+GCFCHRLES+T+QAFGGPGVSKA+AL+RG+VTRYT+SSQA+DRL+Q+CDIVQ+ RK VVQDV TRW STY S+CRL+ LRRPITEHE IDS   LL+EKDWEVL+LVE LLKPFMTAQKHLEASKEVT  LV PYIADL++ LDEAV  L A SCP +S++A+AKKDV+LCA+ALQTD SRRWGD TDVLVY EGPRRQP GF+KEQVLATAL PRSKSLYGI+E E   VW+  A  AV+VA+E KA E
Sbjct:    1 MTGEHVALTSDGWTPASNDTYMSFTCTYISSNFDLVALCLECKKHGWRTAGEDLVEAVKAMIARNGLTGRTVAITTDCELSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARGVVTRYTISSQASDRLEQVCDIVQVERKNVVQDVETRWWSTYVSICRLISLRRPITEHEIIDSTPPLLKEKDWEVLQLVESLLKPFMTAQKHLEASKEVTVRLVSPYIADLQDGLDEAVERLQAHSCPAESIVAEAKKDVILCAQALQTDLSRRWGDRTDVLVYTEGPRRQPRGFKKEQVLATALGPRSKSLYGIEETEHSDVWDAGANEAVKVAIEAKATE 348          
BLAST of mRNA_C-linearis_contig85.16158.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE)

HSP 1 Score: 469 bits (1206), Expect = 2.850e-161
Identity = 241/345 (69.86%), Postives = 272/345 (78.84%), Query Frame = 1
Query:  202 SSHNDTYMSFTCSYITPNFDLEALCLECKKHDGRTTGEHLAEAVKAMIDRNDLKGRTVAITTDCEPSMVAAGRSLQEKEGITHVGCFCHRLESVTAQAFGGPGVSKAMALSRGLVTRYTMSSQAADRLQQMCDIVQIARKKVVQDVATRWASTYASVCRLLYLRRPITEHERIDSIAALLEEKDWEVLRLVEPLLKPFMTAQKHLEASKEVTASLVIPYIADLREDLDEAVADLTAQSCPPDSVLAKAKKDVLLCAEALQTDFSRRWGDGTDVLVYKEGPRRQPCGFRKEQVLATALDPRSKSLYGIDEDEQPGVWEEVAKAAVEVAMEVKAAEGKQSAASLPQP 1236
            S+ NDTYM+FTC+YI+ NFDL ALCLE KKH GRTTGE L EAVKAMI RN L GRTVA TTDCEP MV AGR L+E EG++H+GCFCHR ES+T+QAFGGPGVSKA+AL RG+VTRYTMSSQA++RL+QMCDIVQ+ RKKVVQDV TRW ST                   IDSI  LL EKDWEVL+LVEPLL PFMTAQKHLEASK VT SLV  YIADLR++LDEA+  L A SCP +S++A+AKKD+L CA ALQTD SRRW DGTDVLVY EGPRRQP GF+K+QVLATALDPRSKSLYGI+E E   VWE VA  AV+VA+E KA E  QSA +   P
Sbjct:    3 SASNDTYMTFTCTYISSNFDLVALCLEYKKHGGRTTGEDLVEAVKAMIARNGLTGRTVATTTDCEPFMVKAGRLLEENEGVSHLGCFCHRFESITSQAFGGPGVSKALALPRGVVTRYTMSSQASNRLEQMCDIVQVERKKVVQDVETRWWST----------------PREIDSIPPLLNEKDWEVLQLVEPLLHPFMTAQKHLEASKGVTVSLVTAYIADLRDELDEAIERLQAYSCPAESIVAEAKKDILRCAPALQTDLSRRWRDGTDVLVYTEGPRRQPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVAIEAKATEDTQSAGASSSP 331          
BLAST of mRNA_C-linearis_contig85.16158.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI)

HSP 1 Score: 358 bits (919), Expect = 2.020e-115
Identity = 192/394 (48.73%), Postives = 258/394 (65.48%), Query Frame = 1
Query:   55 MLQSLRPRIAVPHIRVCLENLRGMKKTLDQEVRRRLSSQHVAVTSDGWTSSHNDTYMSFTCSYITPNFDLEALCLECKKHDGRTTGEHLAEAVKAMIDRNDLKGRTVAITTDCEPSMVAAGRSLQ-EKEGITHVGCFCHRLESVTAQAFGGPGVSKAMALSRGLVTRYTMSSQAADRLQQMCDIVQIARKKVVQDVATRWASTYASVCRLLYLRRPITEHERIDSIAALLEEKDWEVLRLVEPLLKPFMTAQKHLEASKEVTASLVIPYIADLREDLDEAVADLTAQSCPP-DSVLAKAKKDVLLCAEALQTDFSRRWGDGTDVLVYKEGPRRQPCGFRKEQVLATALDPRSKSLYGIDEDEQPGVWEEVAKAAVEVAMEVKAAEGKQSAASLP 1230
            M+ +L  R  VP  R  L  +R +K  L+ EV   L ++ VA+T+DGWTS +N++YMS T +YI   + L  L L+C KH G TTGE LA  V  M++R+DL GR +A  TDCEPSM+ AGR L+ +   I+H+GC  HR+ES T+  F G  +  A+ L+R LV RY  SSQ A RL Q+C I+Q+    V+QDV TRW ST+A V RLLYL + I  HE +D +  LL + DWEVLRL+EP+L+PFM AQK LE ++ VT S+ I  +A+LRE L+ A+ DL A +         KA + V   AEAL  DF+ RWGDG+++L Y+EG RRQP GF+++QV ATALDPR+K LYGI + E  GVW  VA AAV++A+   A +   ++A  P
Sbjct:    1 MVSALNKRAKVPSRRELLSRMRAVKTALESEVALMLDAEFVAITTDGWTSRNNESYMSLTVAYIDYEWKLHHLSLDCAKHTGTTTGEDLAALVAGMVERHDLTGRVIACVTDCEPSMIKAGRLLEVDGSTISHIGCSNHRMESTTSSVFNGRSLG-ALGLARTLVGRYKKSSQMAARLVQLCGILQMEPLSVMQDVETRWWSTWAMVVRLLYLMKAIKLHESMDEVHPLLSDTDWEVLRLIEPILRPFMKAQKDLEGAQYVTGSMTIGKMAELREGLEAAITDLKAVAQQGLKETTQKAMEAVRPDAEALMADFTNRWGDGSNILEYREGKRRQPQGFKRKQVYATALDPRAKHLYGIQQREHAGVWRAVASAAVDIALGKHAGDKAPASAEKP 393          
BLAST of mRNA_C-linearis_contig85.16158.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE)

HSP 1 Score: 339 bits (870), Expect = 2.600e-108
Identity = 186/405 (45.93%), Postives = 252/405 (62.22%), Query Frame = 1
Query:   22 FSIVENKHFVGMLQSLRPRIAVPHIRVCLENLRGMKKTLDQEVRRRLSSQHVAVTSDGWTSSHNDTYMSFTCSYITPNFDLEALCLECKKHDGRTTGEHLAEAVKAMIDRNDLKGRTVAITTDCEPSMVAAGRSLQEK-EGITHVGCFCHRLESVTAQAFGGPGVSKAMALSRGLVTRYTMSSQAADRLQQMCDIVQIARKKVVQDVATRWASTYASVCRLLYLRRPITEHERIDSIAALLEEKDWEVLRLVEPLLKPFMTAQKHLEASKEVTASLVIPYIADLREDLDEAVADLTAQSCPPDSVLAK-AKKDVLLCAEALQTDFSRRWGDGTDVLVYKEGPRRQPCGFRKEQVLATALDPRSKSLYGIDEDEQPGVWEEVAKAAVEVAMEVKAAEGKQSAASLP 1230
            F  VE   F  ++  L  +   P  R  +E +R +KK L+ EV   L  ++VA+T+DGWTS  N++YMS T +YI   + L  L L C KH G T GE LA  + +MI+R+ L GR  A  TDCEPSMV AGR L+     + H+GC  HR+ES T+  F G  +  A+A +R +V RY  SSQ + RL     I++++   V+QDV TRW S++A + RLLYL + I  HE  D+IA +L E DWEVLRL+EP+L+PFM AQK LE +K VT S+ +P I +LR  L+ A+ADL A      S   + A + VL  AEAL  DF  RWGDG+ +L Y+EG RRQP GF+ +QV ATA+DPR+K LYGI + E   VW  VA  AV++A E  +++   ++ S P
Sbjct:   26 FLFVEYPEFHAVVSGLNKKARAPIRRALVEKMREIKKNLESEVALMLDDEYVAITTDGWTSRSNESYMSLTVAYIDVGWQLHHLSLNCTKHTGSTHGEDLAREITSMIERHGLTGRVTACVTDCEPSMVKAGRLLEVGGSNLEHIGCSNHRMESTTSSVFNGKSLG-ALAKARAVVGRYKRSSQMSGRLAVFIGILKLSPLSVLQDVETRWWSSWAMIERLLYLMKAIKLHESTDNIAPVLSETDWEVLRLIEPILRPFMQAQKDLEGAKYVTGSMTVPKIGELRNGLEAAIADLRATDRFGISASTREAMEAVLPDAEALWEDFLNRWGDGSSILEYREGKRRQPQGFKLQQVCATAVDPRAKHLYGIRQAEHASVWRAVATKAVDIAAEKFSSDNTATSGSAP 429          
BLAST of mRNA_C-linearis_contig85.16158.1 vs. uniprot
Match: A0A6H5L7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y8_9PHAE)

HSP 1 Score: 270 bits (689), Expect = 6.650e-79
Identity = 156/396 (39.39%), Postives = 217/396 (54.80%), Query Frame = 1
Query:   55 MLQSLRPRIAVPHIRVCLENLRGMKKTLDQEVRRRLSSQHVAVTSDGWTSSHNDTYMSFTCSYITPNFDLEALCLECKKHDGRTTGEHLAEAVKAMIDRNDLKGRTVAITTDCEPSMVAAGRSLQEKEGI-THVGCFCHRLESVTAQAFGGPGVSKAMALSRGLVTRYTMSSQAADRLQQMCDI-VQIARKKVVQDVATRWASTYASVCRLLYLRRPITEHERIDSIAALLEEKDWEVLRLVEPLLKPFMTAQKHLEASKEVTASLVIPYIADLREDLDEAVADLTAQSCPPDSVLAKAKKDVLLCAEALQTDFSRRWGDGTDVLVYKEGPRRQPCGFRKEQVLATALDPRSKSLYGIDEDEQPGVWEEVAKAAVEVAMEVKAAEGKQSAASLPQP 1236
            M+ ++RP   VP  + C+  +R +KK + ++V R +  + V +TSDGWTS  NDTYMS T + IT  + L  L ++C K +G TTG+ LA  +KA + ++ L G+  A+TTDCEPSMV  GR L     + T +GC  +RLES ++  F GP V K M L+RGLVTRY  SSQAADRL+Q     + +  K+V+QDV                                                                VT SLV+P+I DLR  L++A+ DL       D+ +  A   V+ C +AL+ D+  RWGDG ++L+YKEGPRRQP GF+   VLATALDPR+K  YG+DEDE+  VW+ V + AV++A+E + AE  Q  +S   P
Sbjct:    1 MVHAIRPSARVPEKKDCVTTMRTVKKCMMEKVSRLIEGEQVCITSDGWTSCANDTYMSLTFTLITSAWKLVTLSVDCSKSEGTTTGDALAAGIKATVAKHGLTGKVTAVTTDCEPSMVKMGRLLAGDATVSTQIGCCNYRLESTSSIVFNGPRVKKVMVLARGLVTRYPTSSQAADRLKQFVKTYLGVDNKRVIQDV----------------------------------------------------------------VTGSLVVPFIYDLRNSLEDAIDDLVELPPDSDANVNTAWAAVMPCIKALRDDYIDRWGDGHNILIYKEGPRRQPGGFKPVHVLATALDPRTKIPYGVDEDEKADVWKLVQEEAVKIAVETRNAENSQRTSSQQGP 332          
BLAST of mRNA_C-linearis_contig85.16158.1 vs. uniprot
Match: UPI00148F95E3 (zinc finger BED domain-containing protein 1-like n=1 Tax=Notolabrus celidotus TaxID=1203425 RepID=UPI00148F95E3)

HSP 1 Score: 144 bits (363), Expect = 5.150e-34
Identity = 113/401 (28.18%), Postives = 180/401 (44.89%), Query Frame = 1
Query:    1 IIMTNQPFSIVENKHFVGMLQSLRPRIAVPHIRVCLENLRG--------MKKTLDQEVRRRLSSQHVAVTSDGWTSSHNDTYMSFTCSYITPNFDLEALCLECKKHDGRTTGEHLAEAVKAMIDRNDLK-GRTVAITTDCEPSMVAAGRSLQEKEGITHVGCFCHRLESVTAQAFGGPGVSKAMALSRGLVTRYTMSSQAADRLQQMCDIVQIARKKVVQDVATRWASTYASVCRLLYLRRPITEHERIDSIAAL------LEEKDWEVLRLVEPLLKPFMTAQKHLEASKEVTASLVIPYIADLREDLDEAVADLTAQSCPPDSVLAKAKKDVLLCAEALQTDFSRRWGDGTDVLVYKEGPRRQPCGFRKEQVLATALDPRSKSLYGIDEDEQPGVWEEV 1158
            I+   +P S+VE+  F  M+Q+  P   +P      + + G        MK TL      +L+   +A+T+D WTS   + Y+  TC +I+ +++L  LCL     + R TG ++A  ++  + R ++   + VAI  D   ++V A   LQEK G   + C  H L+ V   A   P ++KA+  +R LV  +  S  AA +L+     +     K+VQDV+TRW ST+  V RLL  R P+T      ++         L+   W +L  +   L+ F  A  +L     VT S + P +  L +         T     P      A  D          + + RW   T+V V  + P          Q++ATALDPR + L  +  +E+ GV  +V
Sbjct:  103 IVKDMRPLSMVEDDGFKHMIQTFHPSYILPSRTYFTKLMEGKYGATVGNMKDTL------KLTKNKIALTADAWTSVATEAYLGITCHFISDDWELTTLCLTTMPLEERHTGPNIAAWIEQAVARFEISPSKIVAIVHDNGSNIVLAANILQEKHGWMSIRCAGHTLQLVINHALKQPQITKALGAARCLVEHFRKSELAATKLKTKQKQMGTPEHKLVQDVSTRWNSTFYMVTRLLEQRWPLTATLSDPTVTQSGKRYLDLKADQWALLEELAKALQAFECATVYLSGESYVTVSALPPLVRGLLKSTQ------TTYDTAPVQAFQTAASD----------EITARWS--TEVTVTSDNP--------SSQIIATALDPRFRKLKFLTPEERFGVQRKV 471          
BLAST of mRNA_C-linearis_contig85.16158.1 vs. uniprot
Match: UPI000CE1BA31 (zinc finger BED domain-containing protein 4-like n=1 Tax=Oryzias latipes TaxID=8090 RepID=UPI000CE1BA31)

HSP 1 Score: 137 bits (345), Expect = 4.310e-33
Identity = 94/311 (30.23%), Postives = 152/311 (48.87%), Query Frame = 1
Query:    1 IIMTNQPFSIVENKHFVGMLQSLRPRIAVPH---IRVCLENLRGMKKTLDQEVRRRLSSQHVAVTSDGWTSSHNDTYMSFTCSYITPNFDLEALCLECKKHDGRTTGEHLAEAVKAMIDRNDLKGRTVAITTDCEPSMVAAGRSLQEKEGITHVGCFCHRLESVTAQAFGG-PGVSKAMALSRGLVTRYTMSSQAADRLQQMCDIVQIARKKVVQDVATRWASTYASVCRLLYLRRPI-----TEHERIDSIAALLEEKDWEVLRLVEPLLKPFMTAQKHLEASKEVTASLVIPYIADLREDLDEAVADLT 906
            I+M  QPFSIVE+K F   +  L P   +P+   +R  +E     KK    +V  R S+  V++T+D WTS + D Y++ TC +IT   +L ++ L   K     T  HLAEA   +++   +KG+   + TDC P+MVA    L     + H+ CF H L  V  ++    P +    +  R +V  +  S+ A ++L  M   +     K++Q+V TRW ST+  + RL+  R P+     T H  +  + +    +D++ +     +L PF  A   L   K V+AS VIP +  L+  +      +T
Sbjct:    2 IVMDAQPFSIVEDKGFKAFVNLLDPSYIIPNRKALRTMVEEKYKAKKEKALDVVSRASA--VSLTADMWTSINMDAYLAVTCHFITEEVELASVVLGVLKFPQTHTAAHLAEAKNLLMEEWGIKGKVTGLVTDCAPNMVACANILL----LRHIMCFAHMLNLVVKKSLAQTPELEDIRSKGRRIVGLFKSSTTAKEKLSGMQRQLARPEHKLIQEVETRWNSTFNMLERLIKEREPLGAALATLHTDLPPLTS----EDYQAIHHCLSILSPFQEATVELSTEKRVSASKVIPMVKMLKHYISSRCGQIT 302          
BLAST of mRNA_C-linearis_contig85.16158.1 vs. uniprot
Match: UPI000CE1F3DA (zinc finger BED domain-containing protein 4-like n=10 Tax=Oryzias latipes TaxID=8090 RepID=UPI000CE1F3DA)

HSP 1 Score: 140 bits (352), Expect = 1.150e-32
Identity = 95/311 (30.55%), Postives = 153/311 (49.20%), Query Frame = 1
Query:    1 IIMTNQPFSIVENKHFVGMLQSLRPRIAVPH---IRVCLENLRGMKKTLDQEVRRRLSSQHVAVTSDGWTSSHNDTYMSFTCSYITPNFDLEALCLECKKHDGRTTGEHLAEAVKAMIDRNDLKGRTVAITTDCEPSMVAAGRSLQEKEGITHVGCFCHRLESVTAQAFGG-PGVSKAMALSRGLVTRYTMSSQAADRLQQMCDIVQIARKKVVQDVATRWASTYASVCRLLYLRRPI-----TEHERIDSIAALLEEKDWEVLRLVEPLLKPFMTAQKHLEASKEVTASLVIPYIADLREDLDEAVADLT 906
            I+M  QPFSIVE+K F   +  L P   +P+   +R  +E     KK    +V  R S+  V++T+D WTS + DTY++ TC +IT   +L ++ L   K     T  HLAEA   +++   +KG+   + TDC P+MVA    L     + H+ CF H L  V  ++    P +    +  R +V  +  S+ A ++L +M   +     K++Q+V TRW ST+  + RL   R P+     T H  +  + +    +D++ +     +L PF  A   L   K V+AS VIP +  L+  +      +T
Sbjct:   80 IVMDAQPFSIVEDKGFKAFVNLLDPSYIIPNRKALRTMVEEKYKAKKEKALDVVSRASA--VSLTADMWTSINMDTYLAVTCHFITEEVELASVVLGVLKFPQTHTAAHLAEAKNLLMEEWGIKGKVTGLVTDCAPNMVACANILL----LRHIMCFAHMLNLVVKKSLAQTPELEDIRSKGRRIVGLFKSSTTAKEKLSEMQRQLARPEHKLIQEVETRWNSTFNMLERLFKEREPLGAALATLHTDLPPLTS----EDYQAIHHCLSILSPFQEATVELSTEKRVSASKVIPMVKMLKHYISSRCGQIT 380          
BLAST of mRNA_C-linearis_contig85.16158.1 vs. uniprot
Match: UPI000CE23A86 (zinc finger BED domain-containing protein 4-like n=1 Tax=Oryzias latipes TaxID=8090 RepID=UPI000CE23A86)

HSP 1 Score: 138 bits (347), Expect = 1.460e-32
Identity = 94/311 (30.23%), Postives = 151/311 (48.55%), Query Frame = 1
Query:    1 IIMTNQPFSIVENKHFVGMLQSLRPRIAVPH---IRVCLENLRGMKKTLDQEVRRRLSSQHVAVTSDGWTSSHNDTYMSFTCSYITPNFDLEALCLECKKHDGRTTGEHLAEAVKAMIDRNDLKGRTVAITTDCEPSMVAAGRSLQEKEGITHVGCFCHRLESVTAQAFGG-PGVSKAMALSRGLVTRYTMSSQAADRLQQMCDIVQIARKKVVQDVATRWASTYASVCRLLYLRRPI-----TEHERIDSIAALLEEKDWEVLRLVEPLLKPFMTAQKHLEASKEVTASLVIPYIADLREDLDEAVADLT 906
            I+M  QPFSIVE+K F   +  L P   +P+   +R  +E     KK    +V  R S+  V++T+D WTS + D Y++ TC +IT   +L ++ L   K     T  HLAEA   +++   +KG+   + TDC P+MVA    L       H+ CF H L  V  ++    P +    +  R +V  +  S+ A ++L +M   +     K++Q+V TRW ST+  + RL   R P+     T H  +  + +    +D++ +     +L PF  A   L   K V+AS VIP +  L+  +      +T
Sbjct:   80 IVMDAQPFSIVEDKGFKAFVNLLDPSYIIPNRKALRTMVEEKYKAKKEKALDVVSRASA--VSLTADMWTSINMDAYLAVTCHFITEEVELASVVLGVLKFPQTHTAAHLAEAKNLLMEEWGIKGKVTGLVTDCAPNMVACANILL----FRHIMCFAHMLNLVVKKSLAQTPELEDIRSKGRRIVGLFKSSTTAKEKLSEMQRQLARPEHKLIQEVETRWNSTFNMLERLFKEREPLGAALATLHTDLPPLTS----EDYQAIHHCLSILSPFQEATVELSTEKRVSASKVIPMVKTLKHYISSRCGQIT 380          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig85.16158.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJV8_9PHAE7.540e-18167.76Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JHP9_9PHAE1.810e-17574.43Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 13... [more]
A0A6H5KVI1_9PHAE2.850e-16169.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCS5_ECTSI2.020e-11548.73Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ec... [more]
A0A6H5KUY5_9PHAE2.600e-10845.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L7Y8_9PHAE6.650e-7939.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI00148F95E35.150e-3428.18zinc finger BED domain-containing protein 1-like n... [more]
UPI000CE1BA314.310e-3330.23zinc finger BED domain-containing protein 4-like n... [more]
UPI000CE1F3DA1.150e-3230.55zinc finger BED domain-containing protein 4-like n... [more]
UPI000CE23A861.460e-3230.23zinc finger BED domain-containing protein 4-like n... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig85contigC-linearis_contig85:353736..355896 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score357.5
Seed ortholog evalue9.1e-96
Seed eggNOG ortholog2880.D8LCS5
Hectar predicted targeting categoryother localisation
EggNOG free text desc.protein dimerization activity
EggNOG OGsKOG1121@1,KOG1121@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons2
Model size1306
Cds size1299
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig85.16158.1prot_C-linearis_contig85.16158.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig85 353742..355896 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930646.426042-UTR-C-linearis_contig85:353735..3537411622930646.426042-UTR-C-linearis_contig85:353735..353741Chordaria linearis ClinC8C monoicousUTRC-linearis_contig85 353736..353741 +
1690881176.583816-UTR-C-linearis_contig85:353735..3537411690881176.583816-UTR-C-linearis_contig85:353735..353741Chordaria linearis ClinC8C monoicousUTRC-linearis_contig85 353736..353741 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930646.4410408-CDS-C-linearis_contig85:353741..3537621622930646.4410408-CDS-C-linearis_contig85:353741..353762Chordaria linearis ClinC8C monoicousCDSC-linearis_contig85 353742..353762 +
1690881176.6020622-CDS-C-linearis_contig85:353741..3537621690881176.6020622-CDS-C-linearis_contig85:353741..353762Chordaria linearis ClinC8C monoicousCDSC-linearis_contig85 353742..353762 +
1622930646.4642177-CDS-C-linearis_contig85:354618..3558961622930646.4642177-CDS-C-linearis_contig85:354618..355896Chordaria linearis ClinC8C monoicousCDSC-linearis_contig85 354619..355896 +
1690881176.6149404-CDS-C-linearis_contig85:354618..3558961690881176.6149404-CDS-C-linearis_contig85:354618..355896Chordaria linearis ClinC8C monoicousCDSC-linearis_contig85 354619..355896 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig85.16158.1

>prot_C-linearis_contig85.16158.1 ID=prot_C-linearis_contig85.16158.1|Name=mRNA_C-linearis_contig85.16158.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=433bp
MTNQPFSIVENKHFVGMLQSLRPRIAVPHIRVCLENLRGMKKTLDQEVRR
RLSSQHVAVTSDGWTSSHNDTYMSFTCSYITPNFDLEALCLECKKHDGRT
TGEHLAEAVKAMIDRNDLKGRTVAITTDCEPSMVAAGRSLQEKEGITHVG
CFCHRLESVTAQAFGGPGVSKAMALSRGLVTRYTMSSQAADRLQQMCDIV
QIARKKVVQDVATRWASTYASVCRLLYLRRPITEHERIDSIAALLEEKDW
EVLRLVEPLLKPFMTAQKHLEASKEVTASLVIPYIADLREDLDEAVADLT
AQSCPPDSVLAKAKKDVLLCAEALQTDFSRRWGDGTDVLVYKEGPRRQPC
GFRKEQVLATALDPRSKSLYGIDEDEQPGVWEEVAKAAVEVAMEVKAAEG
KQSAASLPQPPRRRCGSRGLAARCRRELLGCKA
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mRNA from alignment at C-linearis_contig85:353736..355896+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig85.16158.1 ID=mRNA_C-linearis_contig85.16158.1|Name=mRNA_C-linearis_contig85.16158.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=2161bp|location=Sequence derived from alignment at C-linearis_contig85:353736..355896+ (Chordaria linearis ClinC8C monoicous)
ATCATCATGACAAATCAACCATTTTCGGTGAGTAATAATGTGCCCTCGAG CTTGTAAAAAAAGCACCACGAGCGAACTGCTGTAAAGTGTAAAGTTAAGT GTAAAGTTTAAAAAGTTCTCTCTCTCCTCCAGCATAAAGAAAAAATAGTA GACCATTTTCTAGCTACCATTTTCGGTGAGTAATGTGGCCTCGAGCTTGC AAACAAAAACACGAACTGCTGCTACTGTAAAGTGTAAAGTGTACCATAAG TGTAGTAAAAGTGTACAAAGGTGTCTCTCTCTCCTCCAGCATTAAAAACT AGACTACTAATAAAAATAAAATAAAATAAAAACAGGGCCACCGCAGGATT TTGTAGCTACTATTTTCCAGCCGCTGCTATTTATCGAGACAAGCAATGGG GTCAGGGGTAGAGAGACACACCAGCAGAAGAAGCGAGAGAGAAGGAGAGG GAGAGACCGCGCACACCTTATTTTTTACCACAGTTTTTATTTCCAGCACA CGCGTGTACCCACTGCAGTACATCTGAAGCTAACAGCAGCGCTACAAATA CGTAGGCTCCTGTTTCTCCGGGTATCAGAGGGACTGCTGGATTACTAGGC TTGTGTACGCTGTGTTTTCAAACAAGCTCGCTGTGCCTGTCGTTGCTACG TATCACATCTCGAACATTGTTTGCCGCCTTCTCTTCACACATCTACACAC GGGTCCCTGCTGCCTGTGAAGTGTTCAAGTAGTTTTTTTATCTCCTTCCC GCGCCAGGAAGCGATGGCGGTATGCGGCTACCAAAATTGATGCCAGGCTG CTGCCGCTGCTGTACTGATCGATTTCTCTGTCCCTGTTTGACTGATGTCT CCTACCTTCCCGCCGACTCACGCAAAAACTCAGATCGTCGAGAACAAGCA CTTCGTCGGCATGCTTCAGTCTCTGCGCCCCAGGATCGCTGTGCCTCACA TTCGCGTGTGCTTGGAGAACCTCAGAGGAATGAAAAAGACGTTAGACCAG GAAGTACGGCGGAGGCTGAGTAGTCAACACGTCGCCGTCACCTCCGATGG ATGGACATCGAGCCACAACGACACCTACATGTCCTTCACCTGCTCGTATA TCACACCCAACTTCGACCTGGAGGCCCTCTGTTTGGAGTGCAAGAAGCAT GACGGGCGCACGACGGGTGAGCATCTCGCGGAGGCGGTGAAAGCGATGAT CGACCGAAATGATTTGAAGGGTCGTACCGTCGCAATCACCACGGATTGCG AGCCGTCCATGGTGGCGGCGGGTCGCTCCCTCCAGGAAAAAGAAGGCATT ACACACGTGGGCTGCTTCTGCCACCGCCTGGAGTCGGTCACAGCTCAAGC GTTCGGCGGCCCGGGCGTGTCAAAGGCGATGGCTCTCTCGCGTGGCCTGG TAACGCGCTACACCATGTCCAGCCAGGCCGCCGACCGTTTGCAACAGATG TGTGATATCGTTCAGATCGCCAGGAAGAAAGTCGTGCAGGATGTCGCAAC GAGGTGGGCTTCCACGTACGCCAGCGTCTGCCGCCTTCTCTATCTTCGCC GGCCCATCACGGAGCACGAGAGGATCGACAGCATCGCCGCCCTGCTGGAG GAAAAGGATTGGGAGGTGCTTCGGCTGGTGGAGCCGCTGTTGAAGCCGTT CATGACAGCGCAGAAGCACCTCGAGGCATCCAAGGAAGTGACGGCGAGCT TGGTGATTCCATACATCGCCGACCTGCGGGAGGACCTGGACGAAGCTGTC GCAGATCTCACGGCCCAATCTTGTCCTCCGGACTCGGTCTTGGCCAAGGC GAAGAAGGACGTTCTTCTTTGTGCAGAAGCGCTTCAGACCGACTTCAGCC GTCGCTGGGGCGACGGAACGGACGTGTTGGTCTATAAGGAGGGGCCTCGT CGGCAGCCCTGCGGGTTCAGGAAGGAGCAAGTGCTTGCTACTGCCTTGGA TCCTCGCAGCAAAAGTCTGTACGGGATCGATGAGGACGAGCAGCCGGGAG TCTGGGAGGAGGTTGCCAAGGCAGCGGTCGAGGTGGCCATGGAGGTCAAG GCCGCGGAAGGCAAGCAAAGCGCCGCTTCTCTGCCTCAGCCTCCGCGCCG CCGCTGCGGCTCACGGGGCCTCGCCGCAAGGTGCCGTCGCGAGCTCCTCG GATGCAAGGCA
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Coding sequence (CDS) from alignment at C-linearis_contig85:353736..355896+

>mRNA_C-linearis_contig85.16158.1 ID=mRNA_C-linearis_contig85.16158.1|Name=mRNA_C-linearis_contig85.16158.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2598bp|location=Sequence derived from alignment at C-linearis_contig85:353736..355896+ (Chordaria linearis ClinC8C monoicous)
ATGACAAATCAACCATTTTCGATGACAAATCAACCATTTTCGATCGTCGA
GAACAAGCACTTCGTCGGCATGCTTCAGTCTCTGCGCCCCAGGATCGCTG
TGCCTCACATTCGCGTGTGCTTGGAGAACCTCAGAGGAATGAAAAAGACG
TTAGACCAGGAAGTACGGCGGAGGCTGAGTAGTCAACACGTCGCCGTCAC
CTCCGATGGATGGACATCGAGCCACAACGACACCTACATGTCCTTCACCT
GCTCGTATATCACACCCAACTTCGACCTGGAGGCCCTCTGTTTGGAGTGC
AAGAAGCATGACGGGCGCACGACGGGTGAGCATCTCGCGGAGGCGGTGAA
AGCGATGATCGACCGAAATGATTTGAAGGGTCGTACCGTCGCAATCACCA
CGGATTGCGAGCCGTCCATGGTGGCGGCGGGTCGCTCCCTCCAGGAAAAA
GAAGGCATTACACACGTGGGCTGCTTCTGCCACCGCCTGGAGTCGGTCAC
AGCTCAAGCGTTCGGCGGCCCGGGCGTGTCAAAGGCGATGGCTCTCTCGC
GTGGCCTGGTAACGCGCTACACCATGTCCAGCCAGGCCGCCGACCGTTTG
CAACAGATGTGTGATATCGTTCAGATCGCCAGGAAGAAAGTCGTGCAGGA
TGTCGCAACGAGGTGGGCTTCCACGTACGCCAGCGTCTGCCGCCTTCTCT
ATCTTCGCCGGCCCATCACGGAGCACGAGAGGATCGACAGCATCGCCGCC
CTGCTGGAGGAAAAGGATTGGGAGGTGCTTCGGCTGGTGGAGCCGCTGTT
GAAGCCGTTCATGACAGCGCAGAAGCACCTCGAGGCATCCAAGGAAGTGA
CGGCGAGCTTGGTGATTCCATACATCGCCGACCTGCGGGAGGACCTGGAC
GAAGCTGTCGCAGATCTCACGGCCCAATCTTGTCCTCCGGACTCGGTCTT
GGCCAAGGCGAAGAAGGACGTTCTTCTTTGTGCAGAAGCGCTTCAGACCG
ACTTCAGCCGTCGCTGGGGCGACGGAACGGACGTGTTGGTCTATAAGGAG
GGGCCTCGTCGGCAGCCCTGCGGGTTCAGGAAGGAGCAAGTGCTTGCTAC
TGCCTTGGATCCTCGCAGCAAAAGTCTGTACGGGATCGATGAGGACGAGC
AGCCGGGAGTCTGGGAGGAGGTTGCCAAGGCAGCGGTCGAGGTGGCCATG
GAGGTCAAGGCCGCGGAAGGCAAGCAAAGCGCCGCTTCTCTGCCTCAGCC
TCCGCGCCGCCGCTGCGGCTCACGGGGCCTCGCCGCAAGGTGCCGTCGCG
AGCTCCTCGGATGCAAGGCAATCGTCGAGAACAAGCACTTCGTCGGCATG
CTTCAGTCTCTGCGCCCCAGGATCGCTGTGCCTCACATTCGCGTGTGCTT
GGAGAACCTCAGAGGAATGAAAAAGACGTTAGACCAGGAAGTACGGCGGA
GGCTGAGTAGTCAACACGTCGCCGTCACCTCCGATGGATGGACATCGAGC
CACAACGACACCTACATGTCCTTCACCTGCTCGTATATCACACCCAACTT
CGACCTGGAGGCCCTCTGTTTGGAGTGCAAGAAGCATGACGGGCGCACGA
CGGGTGAGCATCTCGCGGAGGCGGTGAAAGCGATGATCGACCGAAATGAT
TTGAAGGGTCGTACCGTCGCAATCACCACGGATTGCGAGCCGTCCATGGT
GGCGGCGGGTCGCTCCCTCCAGGAAAAAGAAGGCATTACACACGTGGGCT
GCTTCTGCCACCGCCTGGAGTCGGTCACAGCTCAAGCGTTCGGCGGCCCG
GGCGTGTCAAAGGCGATGGCTCTCTCGCGTGGCCTGGTAACGCGCTACAC
CATGTCCAGCCAGGCCGCCGACCGTTTGCAACAGATGTGTGATATCGTTC
AGATCGCCAGGAAGAAAGTCGTGCAGGATGTCGCAACGAGGTGGGCTTCC
ACGTACGCCAGCGTCTGCCGCCTTCTCTATCTTCGCCGGCCCATCACGGA
GCACGAGAGGATCGACAGCATCGCCGCCCTGCTGGAGGAAAAGGATTGGG
AGGTGCTTCGGCTGGTGGAGCCGCTGTTGAAGCCGTTCATGACAGCGCAG
AAGCACCTCGAGGCATCCAAGGAAGTGACGGCGAGCTTGGTGATTCCATA
CATCGCCGACCTGCGGGAGGACCTGGACGAAGCTGTCGCAGATCTCACGG
CCCAATCTTGTCCTCCGGACTCGGTCTTGGCCAAGGCGAAGAAGGACGTT
CTTCTTTGTGCAGAAGCGCTTCAGACCGACTTCAGCCGTCGCTGGGGCGA
CGGAACGGACGTGTTGGTCTATAAGGAGGGGCCTCGTCGGCAGCCCTGCG
GGTTCAGGAAGGAGCAAGTGCTTGCTACTGCCTTGGATCCTCGCAGCAAA
AGTCTGTACGGGATCGATGAGGACGAGCAGCCGGGAGTCTGGGAGGAGGT
TGCCAAGGCAGCGGTCGAGGTGGCCATGGAGGTCAAGGCCGCGGAAGGCA
AGCAAAGCGCCGCTTCTCTGCCTCAGCCTCCGCGCCGCCGCTGCGGCTCA
CGGGGCCTCGCCGCAAGGTGCCGTCGCGAGCTCCTCGGATGCAAGGCA
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