prot_C-linearis_contig82.16022.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig82.16022.1
Unique Nameprot_C-linearis_contig82.16022.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length526
Homology
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BLAST of mRNA_C-linearis_contig82.16022.1 vs. uniprot
Match: D7FII0_ECTSI (Ankyrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FII0_ECTSI)

HSP 1 Score: 204 bits (520), Expect = 1.280e-56
Identity = 241/527 (45.73%), Postives = 277/527 (52.56%), Query Frame = 0 
Query:    1 MVPSENHQRSRSSGGTSDAFSQQRR-PSASTSTCGVDEVLVEICTPGARPPIHFVEELSASRPWRSSARSGSSGGVATGATRGKGRRLLSPALFSRQQAAPVXXXXXXXXXXXXXXXXXXXXXXXXXXXSASPLDGVCFTLLGVSTGLKTPGVDAWSVAQALVDSSVDLRCRNFRGMTPLHLACSAGQVDVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVLLDAGDAVDSLSYPAETTXXXXXXXXXXXSCVQELLERGADPLRRNKRGVTPLDMVGTLNIPVSANEGGSGKAKAAREAYEKKLAQGARVKVALARAQRWQRRRGAVLVWEALRRRAAEASAAAAQAASAISD-APEGRIEAGRGGARVERSGDEGVNRKRCRGPQGGGGAGAAAGGQGWLVEQLCAFPDVALMKSVVQFL 525
            MVP  N Q+S + G   D FSQ+     +STSTCGV +V++E CTPGAR PI FV+  +A+    +S R    GG  T    G  R +  P L  RQQ+AP                            S  PLDG   TLLGVS  L TP  D W VA+AL++S+ DLR RN RGMTPLHLACS G+VD AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                                                         + LLDAG+AVDS S PA   XXXXXXXXXXX    ELL RGADP RRNKRG TPLDM G   +        SGKAK AREA+EKKLA+G RV++AL  AQRWQR+RG VLV E LR+RA         A  A++D A +G   AGR   R+ER  D G  ++R R    GG   +A   QGWLV QLC   D ALMK V++FL
Sbjct:    1 MVPPRNKQQSTTIG--FDGFSQRSSCERSSTSTCGVGDVILEFCTPGARSPIDFVDATTAAA---ASCRGRPCGGNTTCYAHGSSRDVRPPVLL-RQQSAPASSTARPSAEASVYTGKHHRRT------STPPLDGARLTLLGVSKALNTPVQDNWEVARALLESNTDLRTRNDRGMTPLHLACSTGEVDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKASDLGTTALHNAGFTPLHVAARCGRLTAL----------------------------------------------------------RALLDAGEAVDSPSTPAXXXXXXXXXXXXXXXXXXELLLRGADPSRRNKRGATPLDMGGPETM--------SGKAKLAREAFEKKLAEGERVRLALTSAQRWQRKRGMVLVCETLRKRA--------NAVLALADGASDGGALAGR--ERLER--DHGDTKRRFRRSLAGGSVASAVPSQGWLVAQLCVHADPALMKGVIEFL 437
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig82.16022.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FII0_ECTSI1.280e-5645.73Ankyrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FII0... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 175..190
score: 41.5
coord: 256..270
score: 35.82
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 207..236
e-value: 0.56
score: 19.3
coord: 273..302
e-value: 3.2
score: 16.7
coord: 306..335
e-value: 1.9E-4
score: 30.8
coord: 240..269
e-value: 1.0
score: 18.4
coord: 174..203
e-value: 1.8E-5
score: 34.2
coord: 340..369
e-value: 2.1
score: 17.4
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 343..371
e-value: 0.0064
score: 16.9
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 207..239
score: 11.674
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 174..206
score: 14.559
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 340..372
score: 10.179
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 306..338
score: 12.235
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 240..272
score: 12.289
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 273..305
score: 10.9
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 157..236
e-value: 3.9E-12
score: 46.6
coord: 245..330
e-value: 9.7E-14
score: 51.7
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 156..378
score: 67.434
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 275..386
e-value: 5.9E-29
score: 102.5
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 152..274
e-value: 2.1E-33
score: 117.4
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 158..381
NoneNo IPR availablePANTHERPTHR24189FAMILY NOT NAMEDcoord: 276..450
NoneNo IPR availablePANTHERPTHR24189:SF55IQ MOTIF AND ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN LOC642574-RELATEDcoord: 175..299
coord: 158..238
NoneNo IPR availablePANTHERPTHR24189:SF55IQ MOTIF AND ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN LOC642574-RELATEDcoord: 276..450
NoneNo IPR availablePANTHERPTHR24189FAMILY NOT NAMEDcoord: 175..299
coord: 158..238

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig82contigC-linearis_contig82:711138..713562 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig82.16022.1mRNA_C-linearis_contig82.16022.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig82 709775..715010 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig82.16022.1 ID=prot_C-linearis_contig82.16022.1|Name=mRNA_C-linearis_contig82.16022.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=526bp
MVPSENHQRSRSSGGTSDAFSQQRRPSASTSTCGVDEVLVEICTPGARPP
IHFVEELSASRPWRSSARSGSSGGVATGATRGKGRRLLSPALFSRQQAAP
VAAASSSPSFVETAGSVSSSSSKHHHRRSASPLDGVCFTLLGVSTGLKTP
GVDAWSVAQALVDSSVDLRCRNFRGMTPLHLACSAGQVDVAKVLLLAGAD
SHARDHRSRCPLHMAALSGNSELVASLLTCGADPNKASDVGTTALHNAAL
LGRVEVTRALLVAGADANCTDHNSFSPLYLASQNGNTQLVLDLLAAGADA
GIRTNRGFTPLHVAARCGRLPVLKVLLDAGDAVDSLSYPAETTPLHLSAG
FSRLSCVQELLERGADPLRRNKRGVTPLDMVGTLNIPVSANEGGSGKAKA
AREAYEKKLAQGARVKVALARAQRWQRRRGAVLVWEALRRRAAEASAAAA
QAASAISDAPEGRIEAGRGGARVERSGDEGVNRKRCRGPQGGGGAGAAAG
GQGWLVEQLCAFPDVALMKSVVQFL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf