mRNA_C-linearis_contig82.16001.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig82.16001.1 vs. uniprot
Match: A0A6H5KQH1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQH1_9PHAE) HSP 1 Score: 784 bits (2025), Expect = 1.210e-277 Identity = 430/567 (75.84%), Postives = 453/567 (79.89%), Query Frame = 2
Query: 185 GRKRPRATATGIVGAAAMASQSTLPHEEHGEYQSGEEEDTEEARIRALVFGKGESGLLRSFGAEADAERGAAAGREADFEGEFYEDFGGDANVVSAADAASGGAVVVVSGKKSGAPAWVDEDDASLKVDVSAKNRLKKLRNNRQEADLAGPEFEQRLRSRFASSNMTADWVKSATAAKSKKGSSEKRGEGFSSDDDDLDGSEEGFGDGED---GDALLRDSAALKGGRGGVLEPGYLNIVR--CKDANQHDPAKAAVRAVSFHPTGELLLTGGFDKTLRLFQVDGVRNAKVHSIFFEDLPITSAAFTGVDQAIVTGRRSFFYSYDVASGKVIKIPRIFSSGRAEKHVETFAASPDGQWLAFIGSGGYVLLLSSKTKQWAADFKLNSTATAVTFSPDSRYVLASSADADVYKFDIRSRRCVLRFFNEGGTSTSSXXXXXXXXXXXXQRLTAIGSDSGVVNVYDADALETGKKVLRPTPLKAVMSLTTPATTTKFSPDGQMLAIASNQKRDALKVIHSASCTPFTNWPTERTPVRYPFALDFSPGSGFLAVGNDRGCVLLYRMRHYPQA 1870
GRKR R G G + HEE Y+S EE EEARIRALVFGKGESGLLRSFG E+ A+ A REA+F G FYED GDA+ A A G A+V GKKSGAPAW+DEDDA LKVDV+AKNRLKKLRNN EADLAGPEFEQRLRSRF+SSNMTADWVKSA DA LR+SAALKGGRGGVLEPGYLNIVR CKDANQHDPAKA VRAVSFHPTGELLL GGFDKTLRLFQVDGVRNAKVHSIFFEDLPITSAAFTG +QAIVTGRRSFFYSYDVA+GKV+KIPR+FSSGR EKH+ETFAASPDGQWLAFIGSGGYVLLLSSKTKQWAADFKLNSTATAVTFSPDSRYVLAS ADADVYKFDIRSRRCVLRFFNEGGT TSS QRLTA+GSDSGVVNVY+ DALETGK++LRP+PLKAVMSLTTP TTT FSPDGQMLAIASNQKRDALKV+HSASCTPFTNWPTERTPVRYPFALDFSPG GFLAVGNDRGCVLLYR+RHYPQA
Sbjct: 13 GRKRSRVALDGGGGDGGAVDSTHQQHEEKHGYESEGEEGEEEARIRALVFGKGESGLLRSFGEESGAKEATGA-REAEFVGGFYEDVEGDADFDGAGAGADGAAIVTGGGKKSGAPAWIDEDDARLKVDVTAKNRLKKLRNNHHEADLAGPEFEQRLRSRFSSSNMTADWVKSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDAFLRNSAALKGGRGGVLEPGYLNIVRRVCKDANQHDPAKATVRAVSFHPTGELLLAGGFDKTLRLFQVDGVRNAKVHSIFFEDLPITSAAFTGAEQAIVTGRRSFFYSYDVATGKVLKIPRVFSSGRTEKHLETFAASPDGQWLAFIGSGGYVLLLSSKTKQWAADFKLNSTATAVTFSPDSRYVLASGADADVYKFDIRSRRCVLRFFNEGGTCTSSLAVKGPTSSSP-QRLTAVGSDSGVVNVYNDDALETGKRILRPSPLKAVMSLTTPVTTTLFSPDGQMLAIASNQKRDALKVVHSASCTPFTNWPTERTPVRYPFALDFSPGGGFLAVGNDRGCVLLYRIRHYPQA 577
BLAST of mRNA_C-linearis_contig82.16001.1 vs. uniprot
Match: D7FYI2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYI2_ECTSI) HSP 1 Score: 588 bits (1516), Expect = 3.530e-204 Identity = 293/326 (89.88%), Postives = 305/326 (93.56%), Query Frame = 2
Query: 893 VRCKDANQHDPAKAAVRAVSFHPTGELLLTGGFDKTLRLFQVDGVRNAKVHSIFFEDLPITSAAFTGVDQAIVTGRRSFFYSYDVASGKVIKIPRIFSSGRAEKHVETFAASPDGQWLAFIGSGGYVLLLSSKTKQWAADFKLNSTATAVTFSPDSRYVLASSADADVYKFDIRSRRCVLRFFNEGGTSTSSXXXXXXXXXXXXQRLTAIGSDSGVVNVYDADALETGKKVLRPTPLKAVMSLTTPATTTKFSPDGQMLAIASNQKRDALKVIHSASCTPFTNWPTERTPVRYPFALDFSPGSGFLAVGNDRGCVLLYRMRHYPQA 1870
+RCKDANQHDPAKA VRAVSFHPTGELLL GGFDKTLRLFQVDGVRNAKVHSIFFEDLPITSAAFTG +QAIVTGRRSFFYSYDV +GKV+KIPR+FSSGR EKH+ETFAASPDGQWLAFIGSGGYVLLLSSKTKQWAADFKLNSTATAVTFSPDSRYVLAS ADADVYKFDIRSRRCVLRFFNEGGT TSS QRLTA+GSDSGVVNVYDADALETGK+VLRP+PLKAVMSLTTP TTTKFSPDGQMLAIASNQ+RDALKV+HSASCTPFTNWPTERTPVRYPFALDFSPG GFLAVGNDRGCVLLYR+RHYPQA
Sbjct: 21 LRCKDANQHDPAKATVRAVSFHPTGELLLAGGFDKTLRLFQVDGVRNAKVHSIFFEDLPITSAAFTGAEQAIVTGRRSFFYSYDVVTGKVLKIPRVFSSGRTEKHLETFAASPDGQWLAFIGSGGYVLLLSSKTKQWAADFKLNSTATAVTFSPDSRYVLASGADADVYKFDIRSRRCVLRFFNEGGTCTSSLASKGPTSSSP-QRLTAVGSDSGVVNVYDADALETGKRVLRPSPLKAVMSLTTPVTTTKFSPDGQMLAIASNQQRDALKVVHSASCTPFTNWPTERTPVRYPFALDFSPGGGFLAVGNDRGCVLLYRIRHYPQA 345
BLAST of mRNA_C-linearis_contig82.16001.1 vs. uniprot
Match: A0A835Z2C0_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2C0_9STRA) HSP 1 Score: 401 bits (1031), Expect = 2.860e-130 Identity = 218/418 (52.15%), Postives = 277/418 (66.27%), Query Frame = 2
Query: 626 LAGPEFEQRLRSRFASSNMTADWVKSATAAKSKKGSSEKRGEGFSSDDDDLDGSEEGFGDGEDGDALLRDSAALKGGRGGV-LEPGYLNIVRCKDANQHDPAKAAVRAVSFHPTGELLLTGGFDKTLRLFQVDGVRNAKVHSIFFEDLPITSAAFTGVDQAIVTGRRSFFYSYDVASGKVIKIPRIFSS-GRAEKHVETFAASPDGQWLAFIGSGGYVLLLSSKTKQWAADFKLNSTATAVTFSPDSRYVLASSADADVYKFDIRSRRCVLRFFNEGGTSTSSXXXXXXXXXXXXQRLTAIGSDSGVVNVYDADALETGKK----VLRPTPLKAVMSLTTPATTTKFSPDGQMLAIASNQKRDALKVIHSASCTPFTNWPTERTPVRYPFALDFSPGSGFLAVGNDRGCVLLYRMRHY 1861
+AG E E+RLR+RF+ SN+ W + A D+D D EE F LL +S L GRGG L PG + +RCKDANQHDP+KA VR+V FH +GELLLT G DKTLR FQVDG N+KVH + +DLPIT AAFT DQ I++G + FY YDV SG V ++P I ++ G+A+ + FA SP+G+W+AF S GY++L+S+KTKQWAADFKLN + A+ FSPDSRY+LAS DA+VYKFD+R RCV R +NEGGT T+ R A+GS+SGVVN+YD+ A V RP PL A+M+LTTPAT KF+ D Q+LAIAS++K+DAL+++H + T F NWPT+RTP+ YPF LDFSP S FLAVGND+G VLLYR+ Y
Sbjct: 1 MAGTELERRLRARFSRSNVGQAWAEPKNNA----------------DEDSSDDEEESF-----AQDLLANSDRLIAGRGGANLRPGNIFALRCKDANQHDPSKAVVRSVQFHSSGELLLTAGLDKTLRFFQVDGEENSKVHGVMLKDLPITQAAFTADDQVILSGDKPHFYYYDVQSGVVQRVPSIRNAAGKAQSTLAKFALSPNGEWIAFAASAGYIMLVSAKTKQWAADFKLNCSVEALVFSPDSRYILASGRDAEVYKFDVRHSRCVQRMYNEGGTGTTGLDISPPQP----HRYMAVGSESGVVNIYDSVAATAASAGSIGVYRPKPLHAIMNLTTPATIVKFNSDSQVLAIASSEKKDALRLVHVTTGTVFANWPTQRTPLGYPFCLDFSPSSNFLAVGNDKGRVLLYRLIPY 393
BLAST of mRNA_C-linearis_contig82.16001.1 vs. uniprot
Match: W7T4E2_9STRA (U3 small nucleolar rna-associated protein 18 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T4E2_9STRA) HSP 1 Score: 373 bits (958), Expect = 2.110e-116 Identity = 224/486 (46.09%), Postives = 297/486 (61.11%), Query Frame = 2
Query: 530 PAWVDEDDASLKVDVSAKNRLKKLRNNRQEADLAGPEFEQRLRSRFASSNMTA-DWVKSATA----AKSKKG------------SSEKRGEGFSSDDDDLDGSEEGFGDGEDGDALLRDSAALKGGRGGV----LEPGYLNIVRCKDANQHDPAKAAVRAVSFHP-TGELLLTGGFDKTLRLFQVDGVRNAKVHSIFFEDLPITSAAFT--GVDQA----IVTGRRSFFYSYDVASGKVIKIPRIFSSGRAEKHVETFAASPDGQWLAFIGSGGYVLLLSSKTKQWAADFKLNSTATAVTFSPDSRYVLASSADADVYKFDIRSRRCVLRFFNEGGTSTSSXXXXXXXXXXXXQRLTAIGSDSGVVNVYDADAL-------ETGKKVLRPT----PLKAVMSLTTPATTTKFSPDGQMLAIASNQKRDALKVIHSASCTPFTNWPTERTPVRYPFALDFSPGSGFLAVGNDRGCVLLYRMRHYPQA 1870
PAW DEDD +L VDV+ K+RL+KLR + E D++G ++++RLR+RFA + A DW + T ++G +SE DD G L R SA L G G L+PG L + RC+DAN +P++A V+AV FHP TG LL T G DKTLR FQVDG RN KV +FF+DLPI +AAF G D++ +V+GRR FFY +D+ +G ++PR+ GR EK +E F ASPDGQWLAF G GYV+L+ +++KQWA +FK+N TA A+ FS D R+++AS DA VY++D+RSRRC+ RF NEGGT TS+ + A+G++SGVVN+Y+ +A+ E G T P KA+ L T T F+ DG +LA+AS RDAL+V+H S T F+NWPT +TP+RYP AL FSP SG LAVGNDRG VLLYR+RHY +
Sbjct: 156 PAWKDEDDETLWVDVARKDRLRKLRRHPDERDISGADYQERLRARFAKGHEAALDWARLPTTPGDRGDGRRGRXXXXREWGGAETSEXXXXXXXXXXDDFGG-------------LFRSSAPLVVGSGTSTRRRLQPGTLEVARCRDANLQEPSQAVVQAVQFHPSTGGLLFTAGLDKTLRFFQVDGKRNDKVAGVFFQDLPIQAAAFVDGGGDKSFREVVVSGRRPFFYWHDLEAGASSRVPRLM--GREEKSLERFVASPDGQWLAFTGKDGYVVLVGARSKQWAGEFKMNGTARALAFSADGRHLMASGGDAVVYRWDLRSRRCLARFHNEGGTVTSALAASAG--------MLAVGAESGVVNLYEEEAVLGGAAGPEHGPTSWHSTAALAPCKALTHLMTAVDTLAFNHDGMLLAMASKWNRDALRVVHVPSRTVFSNWPTGQTPIRYPSALAFSPNSGMLAVGNDRGRVLLYRLRHYESS 618
BLAST of mRNA_C-linearis_contig82.16001.1 vs. uniprot
Match: K3WHM9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WHM9_GLOUD) HSP 1 Score: 334 bits (857), Expect = 2.190e-103 Identity = 187/446 (41.93%), Postives = 270/446 (60.54%), Query Frame = 2
Query: 533 AWVDEDDASLKVDVSAKNRLKKLRNNRQEADLAGPEFEQRLRSRFASSNMTADWVKSATAAKSKKGSSEKRGEGFSSDDDDLDGSEEGFGDGEDGDALLRDSAALKGGRGGVLEPGYLNIVRCKDANQHDPAKAAVRAVSFHPTGELLLTGGFDKTLRLFQVDGVRNAKVHSIFFEDLPITSAAFT-GVDQAIVTGRRSFFYSYDVASGKVIKIPRIFSSGRAEKHVETFAASPDGQWLAFIGSGGYVLLLSSKTKQWAADFKLNSTATAVTFSPDSRYVLASSADADVYKFDIRSRRCVLRFFNEGGTSTSSXXXXXXXXXXXXQRLTAIGSDSGVVNVYDADALETGKKVLRPTPLKAVMSLTTPATTTKFSPDGQMLAIASNQKRDALKVIHSASCTPFTNWPTERTPVRYPFALDFSPGSGFLAVGNDRGCVLLYRMRHYPQ 1867
AWVD+DDA ++V ++ + RL+KLR ++ + G E + RL+ +F SS+ + W A K + + + +DD D EE F D ++R + + G +L+ G L+I R KDANQH+P+ A +++V FHP G+LLLT G DKTL LFQVDG NAKV ++F +DLP+ A FT G + +++G RS+F+SYD+ +GK+ KIP I GR EK +E F S G + F+GS GY+ ++SS++ +W + K+N + TF D RY+L++ +D +YK+D+R+R+CV +EG + A GS+SGVVNVYD L + K P K++M LTT T+ +F+ D Q+LA+AS RDALK +H S T F+NWPT RTP+ Y A+DFSP G+ AVGN RG VLLYR+ HY
Sbjct: 48 AWVDDDDAHVEVSLADQKRLRKLRKTEEDTQVDGHELQTRLKKQFQSSSSSVAW------ADPKNFLDDTKPQQRDADDSDE---EEIF----SADGIVRSTGKMLESSGDMLQQGTLDICRMKDANQHNPSNAVIQSVQFHPNGQLLLTAGLDKTLHLFQVDGTNNAKVENVFVKDLPMLDAKFTLGGSRVVLSGPRSYFFSYDLEAGKITKIPGII--GRKEKKLERFTVSQSGDRIVFLGSDGYMSVMSSRSYEWIGNMKMNGDVRSATFCEDDRYLLSTGSDGQIYKWDMRTRKCVFVHQDEGSLGNHVIAASRDG------KFYAAGSESGVVNVYDNTGLTSPSK-----PRKSLMQLTTEVTSLQFNSDSQILAMASKDSRDALKFVHLPSFTVFSNWPTARTPLHYVSAMDFSPSCGYFAVGNARGRVLLYRLTHYKS 467
BLAST of mRNA_C-linearis_contig82.16001.1 vs. uniprot
Match: A0A6G0XNC3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XNC3_9STRA) HSP 1 Score: 330 bits (847), Expect = 4.040e-102 Identity = 189/446 (42.38%), Postives = 259/446 (58.07%), Query Frame = 2
Query: 533 AWVDEDDASLKVDVSAKNRLKKLRNNRQEADLAGPEFEQRLRSRFASSNMTADWVKSATAAKSKKGSSEKRGEGFSSDDDDLDGSEEGFGDGEDGDALLRDSAALKGGRGGVLEPGYLNIVRCKDANQHDPAKAAVRAVSFHPTGELLLTGGFDKTLRLFQVDGVRNAKVHSIFFEDLPITSAAFT-GVDQAIVTGRRSFFYSYDVASGKVIKIPRIFSSGRAEKHVETFAASPDGQWLAFIGSGGYVLLLSSKTKQWAADFKLNSTATAVTFSPDSRYVLASSADADVYKFDIRSRRCVLRFFNEGGTSTSSXXXXXXXXXXXXQRLTAIGSDSGVVNVYDADALETGKKVLRPTPLKAVMSLTTPATTTKFSPDGQMLAIASNQKRDALKVIHSASCTPFTNWPTERTPVRYPFALDFSPGSGFLAVGNDRGCVLLYRMRHYPQ 1867
AWVDEDD + VD+ RL+KLR E ++ G F++RL+ +FAS A W +K+ + SDD D D L D+ L G VL PG L + R KDANQH P+ A V++V FH G+LLLT G DK LRLFQ+DG N KV SI+ +D+PI+ A FT + +++G R +++SYD+ +G V +IPR+ R E+ FA S LAF+G G V L+SSK+ +W + K+N + A +F D Y+L + D D+YK+D+R+RRCV R +EG + + A+G+DSGVVN+YD A+ T P PLKA+M LTT T+ F+PD Q+LA+AS + +DALK++H S T F NWPT +TP+ Y A+DFSP SG+ AVGN RG VLLYR+ HY
Sbjct: 43 AWVDEDDEQVTVDLENAKRLRKLRRTEDETEVKGDVFQERLKKQFASGRSAATWA-----------DLDKKQRRYDSDDSD------------DEADLFADTNPLIEGSHDVLMPGSLALNRVKDANQHGPSNAVVQSVQFHSNGQLLLTAGLDKALRLFQIDGSNNNKVESIYIKDMPISCAKFTQDGTRVVMSGPRPYYHSYDMEAGAVTRIPRL--GNRRERQWNQFAVSQSH--LAFVGDQGVVSLVSSKSYEWIGNVKMNGSVRAASFCADDNYLLTTGGDGDIYKWDLRTRRCVFRVADEGSLGSG------VLAASGDNKYVAVGADSGVVNIYDHSAMTTPT----PKPLKALMQLTTSITSLAFNPDSQILAMASKETKDALKMVHLPSMTVFANWPTPKTPLHYVTAMDFSPTSGYFAVGNARGRVLLYRLNHYAS 451
BLAST of mRNA_C-linearis_contig82.16001.1 vs. uniprot
Match: A0A5D6YIS1_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YIS1_9STRA) HSP 1 Score: 332 bits (850), Expect = 4.220e-102 Identity = 188/444 (42.34%), Postives = 268/444 (60.36%), Query Frame = 2
Query: 530 PAWVDEDDASLKVDVSAKNRLKKLRNNRQEADLAGPEFEQRLRSRFASSNMTADWVKSATAAKSKKGSSEKRGEGFSSDDDDLDGSEEGFGDGEDGDALLRDSAALKGGRGGVLEPGYLNIVRCKDANQHDPAKAAVRAVSFHPTGELLLTGGFDKTLRLFQVDGVRNAKVHSIFFEDLPITSAAFT-GVDQAIVTGRRSFFYSYDVASGKVIKIPRIFSSGRAEKHVETFAASPDGQWLAFIGSGGYVLLLSSKTKQWAADFKLNSTATAVTFSPDSRYVLASSADADVYKFDIRSRRCVLRFFNEGGTSTSSXXXXXXXXXXXXQRLTAIGSDSGVVNVYDADALETGKKVLRPTPLKAVMSLTTPATTTKFSPDGQMLAIASNQKRDALKVIHSASCTPFTNWPTERTPVRYPFALDFSPGSGFLAVGNDRGCVLLYRMRH 1858
PAWVD+DDA ++V + + RL+KLR + +A + G E +QRL+ +F S + + W + K S +RG+ SD+++ +E D +R + + G VL+ G ++I R KDANQH P+ A V++V FHP G+LLLT G DKTL LFQVDG NA V S+F +DLP+ A FT G + +++G R +F+SYD+ +G+V KIP + +GR EK E A SP G F+GS G++ ++S+++ +W + K+N + + F D RY+L++ +D D+YK+D+R+RRCV R +EG + + A GS SGVVNVYD L K P KA+M LTTP + +F+PD Q+LA+AS RDALK +H S T F+NWPT RTP+ Y A+DFSP SG+ AVGN RG V L RH
Sbjct: 53 PAWVDDDDARVRVSLEEQKRLRKLRKSEADAVVDGHELQQRLKKQFHSGSGSVAWADPENFLSAAKKPS-RRGDDSDSDEEEALSAE---------DVAVRSTGKMLDSAGDVLQQGSIDICRMKDANQHGPSNAVVQSVQFHPNGQLLLTAGLDKTLHLFQVDGSTNAAVESVFLKDLPLLDAKFTLGGSRVLLSGPRPYFFSYDLEAGRVTKIPGL--AGRKEKKFERVAVSPSGDRAVFLGSDGFMSVVSARSYEWIGNLKMNGSVRSAAFCEDDRYLLSTGSDGDIYKWDMRTRRCVYRHQDEGSLGNLAIAASPDG------KYYAAGSASGVVNVYDNAGLTAPTK-----PRKALMQLTTPVDSLRFNPDSQILAMASKDVRDALKFVHLPSLTVFSNWPTARTPLHYVSAMDFSPSSGYFAVGNARGRVDLLGGRH 473
BLAST of mRNA_C-linearis_contig82.16001.1 vs. uniprot
Match: A0A8K1C3S5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3S5_PYTOL) HSP 1 Score: 330 bits (845), Expect = 1.260e-101 Identity = 189/445 (42.47%), Postives = 268/445 (60.22%), Query Frame = 2
Query: 530 PAWVDEDDASLKVDVSAKNRLKKLRNNRQEADLAGPEFEQRLRSRFASSNMTADWVKSATAAKSKKGSSEKRGEGFSSDDDDLDGSEEGFGDGEDGDALLRDSAALKGGRGGVLEPGYLNIVRCKDANQHDPAKAAVRAVSFHPTGELLLTGGFDKTLRLFQVDGVRNAKVHSIFFEDLPITSAAFT-GVDQAIVTGRRSFFYSYDVASGKVIKIPRIFSSGRAEKHVETFAASPDGQWLAFIGSGGYVLLLSSKTKQWAADFKLNSTATAVTFSPDSRYVLASSADADVYKFDIRSRRCVLRFFNEGGTSTSSXXXXXXXXXXXXQRLTAIGSDSGVVNVYDADALETGKKVLRPTPLKAVMSLTTPATTTKFSPDGQMLAIASNQKRDALKVIHSASCTPFTNWPTERTPVRYPFALDFSPGSGFLAVGNDRGCVLLYRMRHY 1861
P WVD+DD ++V + + RL+KLR + + G E +QRL+ +FAS + + W A K +RG SD +D EE G D ++R + + VL G L I R KDANQH P+ A V++V FHP G+LLLT G DKTL LFQVDG NA+V ++F +DLPI SA +T G + +++G RS+F+SYD+ +G++ KIP I +GR ++ +E F S G +AF+GS GY+ LLS+++ + K+N + TF + RY+L++ +D +VYK+D+R+R+CV +EG S + A GS SGVVNVYD D + +K P KA+M LTT KF+PDGQ+LA++S RDALK++H + T F NWP+ +TP+ Y A+DFSP SG+ AVGN RG VLLYR+ HY
Sbjct: 50 PVWVDDDDGEIEVTLDDERRLRKLRKTEDDT-VDGHELQQRLKKQFASGHGSVSW------ADPKNFLGPQRGNDLLSDSED----EEAIGT----DTIVRSTGKMLASEHDVLAQGTLEITRMKDANQHAPSGAVVQSVEFHPNGQLLLTAGLDKTLHLFQVDGTNNARVENVFVKDLPILSAHYTLGGSRVVLSGPRSYFFSYDLEAGRITKIPGI--TGRKDRKLERFTVSKSGDHMAFLGSDGYMSLLSARSYETIGHIKMNGDVRSATFCENDRYLLSTGSDGEVYKWDMRTRKCVFVHSDEGSLGNFSIAAS--------SKYYATGSTSGVVNVYDNDGVTVHRK-----PRKALMQLTTQVDGLKFNPDGQILAMSSRDTRDALKMVHVPTMTVFANWPSSKTPLHYVSAMDFSPNSGYFAVGNARGRVLLYRLTHY 464
BLAST of mRNA_C-linearis_contig82.16001.1 vs. uniprot
Match: A0A485L5H0_9STRA (Aste57867_16359 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L5H0_9STRA) HSP 1 Score: 328 bits (840), Expect = 5.940e-101 Identity = 185/446 (41.48%), Postives = 263/446 (58.97%), Query Frame = 2
Query: 533 AWVDEDDASLKVDVSAKNRLKKLRNNRQEADLAGPEFEQRLRSRFASSNMTADWVKSATAAKSKKGSSEKRGEGFSSDDDDLDGSEEGFGDGEDGDALLRDSAALKGGRGGVLEPGYLNIVRCKDANQHDPAKAAVRAVSFHPTGELLLTGGFDKTLRLFQVDGVRNAKVHSIFFEDLPITSAAFTGVDQAI-VTGRRSFFYSYDVASGKVIKIPRIFSSGRAEKHVETFAASPDGQWLAFIGSGGYVLLLSSKTKQWAADFKLNSTATAVTFSPDSRYVLASSADADVYKFDIRSRRCVLRFFNEGGTSTSSXXXXXXXXXXXXQRLTAIGSDSGVVNVYDADALETGKKVLRPTPLKAVMSLTTPATTTKFSPDGQMLAIASNQKRDALKVIHSASCTPFTNWPTERTPVRYPFALDFSPGSGFLAVGNDRGCVLLYRMRHYPQ 1867
AWVD+DD + VD+ NRL+KLR E ++ G +++RL+ +F S A W A +KK S + G G SD + D E+ L + AL G VL PG L + R KDANQH + A V++V FH G+LLLT G DKTLRLFQ+DG NAK+ SIF D+PI+ A F+ I ++G R FF+SYD+ +G V +IPR+ R E+ + F S +AF+GS G + L+S+K+ +W D K+N + F D Y++++ +D VYK+D+R+RRC+ R +EG + + + A+G+DSGVVN+YDA + P PLK++M LTT T +F+PD Q+LA+AS + +DALK++H S T F NWP+ +TP+ Y ++DFSP SG+ AVGN RG VLLYR+ HY
Sbjct: 40 AWVDDDDQDVTVDLENSNRLRKLRKTEDETEIQGDVYQERLKKQFESGRSAASWA-DLDALDAKKKSRRRSGSGADSD----------YSDEEEQVDLFAGTGALVEGSKDVLMPGTLEMCRVKDANQHGQSNAVVQSVQFHANGQLLLTAGLDKTLRLFQIDGSTNAKIESIFLNDMPISCAKFSADGTHITLSGPRPFFHSYDIEAGTVARIPRV--GARKERRWDNFCVSRSQ--IAFLGSEGVMSLVSAKSYEWIGDIKMNGGVRSAAFCDDDNYLVSTGSDGQVYKWDMRTRRCLYRVGDEGSLGSGAIAASGNG------KYVAVGADSGVVNIYDAATMGATST---PAPLKSLMHLTTSIATLQFNPDSQILAMASKEAKDALKMVHLPSMTVFANWPSPKTPLHYVTSMDFSPTSGYFAVGNARGRVLLYRLNHYAS 461
BLAST of mRNA_C-linearis_contig82.16001.1 vs. uniprot
Match: A0A024UBD2_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UBD2_9STRA) HSP 1 Score: 328 bits (840), Expect = 6.310e-101 Identity = 186/447 (41.61%), Postives = 265/447 (59.28%), Query Frame = 2
Query: 533 AWVDEDDASLKVDVSAKNRLKKLRNNRQEADLAGPEFEQRLRSRFASSNMTADWVK-SATAAKSKKGSSEKRGEGFSSDDDDLDGSEEGFGDGEDGDALLRDSAALKGGRGGVLEPGYLNIVRCKDANQHDPAKAAVRAVSFHPTGELLLTGGFDKTLRLFQVDGVRNAKVHSIFFEDLPITSAAFTGVDQAIV-TGRRSFFYSYDVASGKVIKIPRIFSSGRAEKHVETFAASPDGQWLAFIGSGGYVLLLSSKTKQWAADFKLNSTATAVTFSPDSRYVLASSADADVYKFDIRSRRCVLRFFNEGGTSTSSXXXXXXXXXXXXQRLTAIGSDSGVVNVYDADALETGKKVLRPTPLKAVMSLTTPATTTKFSPDGQMLAIASNQKRDALKVIHSASCTPFTNWPTERTPVRYPFALDFSPGSGFLAVGNDRGCVLLYRMRHYPQ 1867
AW+DEDD + VD+ +RL+KLR + E + G F+QRL+ +F S A W A AK + G +R +G D+++ D L S +L VL PG L + R KDANQH + A +++V FHP G+LLLT G DKTLRLFQ+DG NAKV SIF +D+PI+ A FT + IV +G R+F ++YD+ SG V +IPRI R E+ ++FA S AF+G+ G + LLSS + +W + K+N + + TF D+ Y+L + +D DVYK+D+R+RRC+ R +EG + + + A+G+DSGVVNVYD + L P P K ++LTT F+PDGQ+LA++S + +DALK++H S T F NWPT +TP++Y ++DFSP G+ A+GN RG VLLYR+ HY
Sbjct: 48 AWIDEDDEHVTVDLEDSSRLRKLRKSDDETQVQGDVFQQRLKKQFESGRSVASWADFGAIDAKKRAG---RRSDGEDDDEEEFD--------------LFATSGSLMERSHDVLLPGTLEVGRVKDANQHGQSNAVIQSVQFHPNGQLLLTAGLDKTLRLFQIDGSTNAKVESIFLKDMPISCAKFTADGKRIVMSGPRTFIHTYDMESGSVQRIPRI--GNRKERKWDSFAVSRSHA--AFLGNDGIIALLSSASYEWMGNIKMNGSVRSATFCDDNNYLLTTGSDGDVYKWDMRTRRCIYRVGDEGSLGSGAIAAKG--------KYVAVGADSGVVNVYDINTLSA--TATHPKPAKTFLNLTTSIDQLLFNPDGQILAMSSKETKDALKMVHVPSMTVFANWPTAKTPLQYVTSMDFSPSGGYFALGNARGRVLLYRLNHYAS 463 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig82.16001.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig82.16001.1 >prot_C-linearis_contig82.16001.1 ID=prot_C-linearis_contig82.16001.1|Name=mRNA_C-linearis_contig82.16001.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=569bp MPPSKGGRKRPRATATGIVGAAAMASQSTLPHEEHGEYQSGEEEDTEEARback to top mRNA from alignment at C-linearis_contig82:381300..389100- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig82.16001.1 ID=mRNA_C-linearis_contig82.16001.1|Name=mRNA_C-linearis_contig82.16001.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=7801bp|location=Sequence derived from alignment at C-linearis_contig82:381300..389100- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig82:381300..389100- >mRNA_C-linearis_contig82.16001.1 ID=mRNA_C-linearis_contig82.16001.1|Name=mRNA_C-linearis_contig82.16001.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3414bp|location=Sequence derived from alignment at C-linearis_contig82:381300..389100- (Chordaria linearis ClinC8C monoicous)back to top |