prot_C-linearis_contig80.15920.1 (polypeptide) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig80.15920.1 vs. uniprot
Match: D7FLF8_ECTSI (FACT complex subunit SSRP1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLF8_ECTSI) HSP 1 Score: 951 bits (2459), Expect = 0.000e+0 Identity = 533/639 (83.41%), Postives = 567/639 (88.73%), Query Frame = 0
Query: 1 MNFAKIGVQGYSLGNLQLNSDELIWTSSDKSSSKKVKWLDVSRATWAQYAAYCHLRLFMKTDASPVRLDGFSKAQYADIEKFLSERDVSLSKESPNPGGGNYGNIEVLDNIVSFSSGNRALFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDEDTDEPSPAESLQMAVIERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDVSKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATITVNMTAEDLQTKYDGNLNSEMVGPLHNLIAKIFKVLSKKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETAKPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQSGNDKAMLQLGDLDDHDPYKAALDDDQGDEXXXXXXADYAPDAPGGSDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKKDKNAPKGAMSAFMQFSQAKRAEVKAENPDMKITEISKVLGEKWRGMDEEGKASFQQKADADKERYQKEMITYNAKKAA-EPPEEEES 638
MNF+KIGVQGYSLGNLQL ++EL WTS DKSSSKKVKWLDVS ATWAQYAAYCHLRLFMK DA PVRLDGFSKAQ+ADIEKFLSERDVSLS ESPNPGGGNYG+IEVLDNIV FSSGN+ LFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDEDTDE SPAESLQMAV+ERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYND+SKLFLLEKPDERYVAFV+SLDKPIRQGQQKYQHLVLRTTKDEATITVNM+AEDLQ KYD NLNSEM+GPLHNLIAKIFKVLS KPVYVTGKFSS NGAKAVKCALGANEG+LYPLNKSFIFIHKPTCIIGFDEI+SVEFQRYGGAQGAGVTRNFDLCVAPKSVAGET KPYVFSGIDRSEY+SLYSFLSTKKLRIKNIK+SGND AMLQLGDLDDHDPYKAALDDDQG++ ++ XXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXAKKDK+APKGAMSAFMQFSQA RA+VK +NP++K+TEISKVLGEKW +DE K +Q KAD DK RY++E Y++KKAA EPP++ +S
Sbjct: 1 MNFSKIGVQGYSLGNLQLTAEELNWTSDDKSSSKKVKWLDVSHATWAQYAAYCHLRLFMKRDARPVRLDGFSKAQHADIEKFLSERDVSLSNESPNPGGGNYGDIEVLDNIVRFSSGNKTLFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDEDTDERSPAESLQMAVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVISLDKPIRQGQQKYQHLVLRTTKDEATITVNMSAEDLQKKYDSNLNSEMIGPLHNLIAKIFKVLSNKPVYVTGKFSSTNGAKAVKCALGANEGYLYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETPKPYVFSGIDRSEYSSLYSFLSTKKLRIKNIKESGNDNAMLQLGDLDDHDPYKAALDDDQGEDEE----SEXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRAHKTSKKRPGTGSAKKGPTQKXXXXXXXXXXXXXXXXXAKKDKDAPKGAMSAFMQFSQANRAQVKTDNPELKVTEISKVLGEKWGKLDETQKKPYQDKADEDKARYKRERDAYDSKKAATEPPQQSDS 635
BLAST of mRNA_C-linearis_contig80.15920.1 vs. uniprot
Match: A0A6H5L083_9PHAE (FACT complex subunit SSRP1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L083_9PHAE) HSP 1 Score: 605 bits (1561), Expect = 1.480e-210 Identity = 371/496 (74.80%), Postives = 385/496 (77.62%), Query Frame = 0
Query: 119 RALFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDEDTDEPSPAESLQMAVIERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDVSKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATITVNMTAEDLQTKYDGNLNSEMVGPLHNLIAK----IFKVLSKKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETAKPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQSGNDKAMLQLGDLDDHDPYKAALDDDQGDEXXXXXXADYAPDAPGGSDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA------------------------------------KKDKNAPKGAMSAFMQFSQAKRAE 574
R LFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDEDTDE SPAESLQMAV+ERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYND+SKLFLLEKPDERYVAFV+SLDKPIRQGQQKYQHLVLRTTKDEA ITVNM+AEDLQ KYD NLNSEM+GPLHNL+AK IFKVLS KPVYVTGKFSS NGAKAVKCALGANEG+LYPLNK GAGVTRNFDLCVAPKSVAGET KPYVFSGIDRSEY+SLYSFLSTKKLRIKNIK+ GND AMLQLGDLDDHDPYKAALDDD+G++ ADYAPDA GGSDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A KKDK+APKGAMSAFMQFSQA RA+
Sbjct: 3 RTLFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDEDTDERSPAESLQMAVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVISLDKPIRQGQQKYQHLVLRTTKDEAAITVNMSAEDLQKKYDSNLNSEMIGPLHNLVAKVPKLIFKVLSSKPVYVTGKFSSTNGAKAVKCALGANEGYLYPLNK-----------------------------GAGVTRNFDLCVAPKSVAGETPKPYVFSGIDRSEYSSLYSFLSTKKLRIKNIKERGNDNAMLQLGDLDDHDPYKAALDDDEGEDEESEDDADYAPDARGGSDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEDSDDGAHKTSKKKPGTGSAKKGATQKKVGCSPEPSSLNPCFPQRASGGHSSKPTPKKRTKKDKDAPKGAMSAFMQFSQANRAQ 469
BLAST of mRNA_C-linearis_contig80.15920.1 vs. uniprot
Match: A0A836C825_9STRA (FACT complex subunit SSRP1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C825_9STRA) HSP 1 Score: 451 bits (1159), Expect = 1.000e-147 Identity = 330/661 (49.92%), Postives = 404/661 (61.12%), Query Frame = 0
Query: 3 FAKIGVQGYSLGNLQLNSDELIWTSSDKSSSKKVKWLDVSRATWAQYAAYCHLRLFMKTDASP-VRLDGFSKAQYADIEKFLSERDVSLSKESPNPGGGNYGNIEVLDNIVSFSSGNRALFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDEDTD--------------EPSP---AESLQMAVIERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDVSKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATITVNMTAEDLQTKYDGNLNSEMVGPLHNLIAKIFKVLSKKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAG-VTRNFDLCVAPKSVAGETAKPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQSGNDKAMLQLGDLDDHDPYKAALDDDQGDEXXXXXXADYAPDAPGGSDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA------------------KKDKNAPKGAMSAFMQFSQAKRAEVKAENPDMKITEISKVLGEKWRGMDEEGKASFQQKADADKERYQKEMITYNA 626
F IG+QG+S+G+++ + + ++W SSD+SS +KV W +ATWA + Y HLR+FMK A P VR DGF +A + +++ L+ + LS++ D LV +R+ LP++ ED D + P AE+ AV++RANI DVKG VL E + S GTF PRGRY++EMYS F+RMHGS+YDYKIQY D++KLFLLEKPD+RYVAFV+SLDKP+RQGQQ+YQHLVL+ +K E T+ +NM+ +LQ KY G L M G L NLIAKIFK LS + V+VTG + S GAK VKCA+GA+EGHLYPLNKSFIFIHKPT +IGFDE++SVEFQRY G Q V R+FDLCV +S++GE +K Y FSGIDRSEY SLY + TK LRIKNIK SG+ A +D D + E P+A G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KD NAPKGA SAFM FS R +V + P +KITE+SKVLGE+WRGM E K F+ KA ADK RY EM Y +
Sbjct: 9 FKGIGIQGHSVGSVKFSDEGVMWASSDRSSQQKVLWSKAEKATWAVFGKYAHLRMFMKDPADPPVRFDGFQRADFDRLKEALAAHSIKLSRDK---------------------------------------------------------------DCLVEMRLYLPDESEDDDGMEVDEDGEAIRKKDKKPRFTAETFHQAVMDRANIRDVKGSVLCELDSSLGTFLTPRGRYALEMYSTFLRMHGSKYDYKIQYEDINKLFLLEKPDDRYVAFVISLDKPVRQGQQRYQHLVLQASKVEETLNLNMSEAELQEKYKGALEPVMRGALCNLIAKIFKSLSGRAVFVTGNYRSAAGAKCVKCAMGASEGHLYPLNKSFIFIHKPTRVIGFDEVESVEFQRYSGTQDPSTVRRSFDLCVTLRSISGEPSKDYTFSGIDRSEYPSLYQWCQTKNLRIKNIKSSGDKVASALAEAMDSADVRE---------EGEIKRVKSSEPEASGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSKPEGGKRKAPAXXXXXXXXXXXKDPNAPKGAKSAFMYFSMETRGDVLKDQPGLKITEVSKVLGERWRGMTAEDKKQFEDKAAADKARYGTEMQEYKS 597
BLAST of mRNA_C-linearis_contig80.15920.1 vs. uniprot
Match: A0A7S2SJ65_9STRA (FACT complex subunit SSRP1 (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SJ65_9STRA) HSP 1 Score: 385 bits (990), Expect = 4.880e-123 Identity = 211/471 (44.80%), Postives = 299/471 (63.48%), Query Frame = 0
Query: 6 IGVQGYSLGNLQLNSDELIWTSS------DKSSSKKVKWLDVSRATWAQYAAYCHLRLFMKTDASPVRLDGFSKAQYADIEKFLSER-DVSLSKESPNPGGGNYGNIEVLDNIVSFSS----------------GNRALFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDE----DTDEPSPAESLQMAVIERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDVSKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATITVNMTAEDLQTKYDGNLNSEMVGPLHNLIAKIFKVLSKKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETAKPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQSGNDKA 449
IG+ G+S+G ++ + W S+ D +S+ + V A W + HLR+ +T + R DGF + + + ++E DV +K + G ++G E+ D ++F + + + +VSQCV+PG + N++ELQ HESD + D LVAIR +P E D D P+ AE +++ A I + G V+VEF+E++GTF PRGRY +E+Y F+RM G++YDYKI+Y+D+++LFLL KPD+ ++AFV++LDKPIRQGQQ+YQ LVL+TTK+ + +TVN+ ++L+ +Y G L M G L NLIAK FK+++KK V++ GKF + VKCAL ANEGHLYPL KSF+FIHKP +I FDE+DSVEFQRY G QG+ TRNFDLCV S AG+ K Y+FSGIDRS+YTSLY+FLS KK++IKNI++S D A
Sbjct: 15 IGLHGHSVGTFMADAQGIKWKSALLTDDDDVVTSRSISKKHVIGARWTIFGRSGHLRI--QTPNTEFRFDGFPYSDFDKVRDIMNEYYDVETNKLPMSTAGNSFGLTEIEDRNLAFKQCILEDADEEGEEFEPREGDEMMSMKLAEVSQCVLPGNNR-NEIELQFHESDTVEAGTDQLVAIRFYIPPDPEMDPSDRDAPTSAEVFHQRIMKNAKIKNTAGDVIVEFDENKGTFLTPRGRYLIELYDSFLRMRGNKYDYKIKYDDIARLFLLPKPDDTHMAFVIALDKPIRQGQQRYQMLVLQTTKENSEVTVNLDEKELEEEYKGELQPVMQGALCNLIAKTFKIIAKKKVFIPGKFVNAYQQSCVKCALKANEGHLYPLEKSFVFIHKPPVLIRFDEVDSVEFQRYAGGQGS--TRNFDLCVMLASSAGDPQKEYIFSGIDRSDYTSLYNFLSGKKIKIKNIQESKIDTA 480
BLAST of mRNA_C-linearis_contig80.15920.1 vs. uniprot
Match: A0A7S4HR37_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HR37_9STRA) HSP 1 Score: 390 bits (1001), Expect = 9.320e-121 Identity = 267/673 (39.67%), Postives = 385/673 (57.21%), Query Frame = 0
Query: 6 IGVQGYSLGNLQLNSDELIWTSS--------DKSSSKKVKWLDVSRATWAQYAAYCHLRLFMKTDASPV----RLDGFSKAQYADIEKFLSER-DVSLSKESPNPGGGNYGNIEVLDNIVSFSS----------------GNRALFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLP-EKDEDTDE---PSPAESLQMAVIERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDVSKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATITVNMTAEDLQTKYDGNLNSEMVGPLHNLIAKIFKVLSKKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETAKPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQSGNDKAMLQ---------------LGDLDDHDPYKAALDDDQGDEXXXXXXADYAPDAPGGSDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKK----DKNAPKGAMSAFMQFSQAKRAEVKAENPDMKITEISKVLGEKWRGMDEEGKASFQQKADADKERYQKEMITYNA 626
IG+ G+S+G + D L W S+ D SSS+ + + A W + H+R+ K + PV R DGF A + + L DV L+K + + G ++G ++ D + F + N+K++SQCV+PG + N++E+Q HESDA + D LVAIR +P + D D E +PAE Q +++ ANI G V+VE E++GTF PRGRY++E+Y F+RM G++YDYKI+Y+D+S+LFLL KPDE ++AFV++LDKPIRQGQQ+YQ+LV++TTKD A +TVN+ E L+ +Y+G+L M G L NL+AK FK+++KK V++ GKF++ N VKCAL A+EGHLYPL K FIFIHKPT ++ FD+++SVEFQRY G QG+ TRNFDLCV+ + + K Y+FSGIDRS+YT LY+FLS KK++IKN++ + D A G++++ ++ +D+ D G D+ XXXXXXX XXXXXXXXXXXXXX KK D APK SA+ F A R ++K +NPD E+S + G+ W+ + E K +++ A++D R+++EM Y+A
Sbjct: 10 IGLHGHSVGTFTADPDGLRWKSAVMGGGDNDDISSSRVLPAKTLVAAKWTVFGRSGHVRVRSKA-SDPVNAELRFDGFPAADFDRLRDVLKRLFDVDLTKHAMSSAGTSFGLTDIEDGNMVFRQCILEDADEEGEEFEPRDGDEMMSANLKEISQCVLPGNNR-NEIEMQFHESDAVEAGTDQLVAIRFYIPPDPDADPSELDASTPAELFQQRIMKNANIKRTTGDVIVEIPEAKGTFLTPRGRYAIELYDTFLRMRGAKYDYKIKYDDISRLFLLPKPDEVHMAFVIALDKPIRQGQQRYQNLVMQTTKDHAELTVNLDEEVLEKEYNGDLQPVMYGALSNLVAKTFKIIAKKKVFIPGKFANANQQPCVKCALRASEGHLYPLEKQFIFIHKPTVLVRFDDVESVEFQRYAGGQGS--TRNFDLCVSLINSGDSSTKEYIFSGIDRSDYTGLYNFLSGKKIKIKNLQGNILDDAPSAPPVYNEDVIYGVPAGAGEMEESSEDESYGTNDEESVESESISGDDDDLGSGFDDSDLEEHRKAAKKSKPEDAKGKEKSNKXXXXXXXPEKEGSSXXXXXXXXXXXXXXDKVAPKKKXXXDPKAPKKGKSAYNYFLTAMRPKIKEQNPDATFGELSTLAGQAWKKVSNEEKEKYEKMAESDAARFKREMADYSA 678
BLAST of mRNA_C-linearis_contig80.15920.1 vs. uniprot
Match: A0A6U3RIK7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3RIK7_9STRA) HSP 1 Score: 382 bits (980), Expect = 1.680e-117 Identity = 209/481 (43.45%), Postives = 304/481 (63.20%), Query Frame = 0
Query: 6 IGVQGYSLGNLQLNSDELIWTSS--------DKSSSKKVKWLDVSRATWAQYAAYCHLRLFMKTD-------ASPVRLDGFSKAQYADIEK-FLSERDVSLSKESPNPGGGNYGNIEVLDNIVSFSS----------------GNRALFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDE----DTDEPSPAESLQMAVIERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDVSKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATITVNMTAEDLQTKYDGNLNSEMVGPLHNLIAKIFKVLSKKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVAGET-AKPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQSGNDKA 449
IG+ G+S+G + + W S+ D +S+ + V+ A W + H+R+ K A +R DGF Y + K F +V +++ S + G ++GN ++ + + F + L + +VSQCV+PG + N++ELQ HESD + D LV +R+ +P + D D +PAE LQ +++ ANI + G V+VEF+ES+GTF PRGRY++E+Y F+RM G++YDYKI+Y+D+SKLFLL KPD+ ++AFV++LDKPIRQGQQ+YQ LV++TTK+++ ++VN+ E LQ++Y G+L M G L NL+AK FKV++KK V++ GKF++ N VKCAL ANEGHLYPL K F+FIHKP ++ FDE++SVEFQRY G QG+ TRNFDLCV + +G+T +K YVFSGIDRS+YT LY+FLS KK++I N + G + A
Sbjct: 14 IGLHGHSVGTFTADPAAIQWKSAMMGASDDDDIVTSRLIPPRSVASAQWTVFGRSGHIRIQQKPGGGSQSAVALELRFDGFPPTDYDKVRKSFQRLYNVDVTRHSMSSCGASFGNTDLDNRNLVFRQCILEDNDEEGMEVEPQNGDEMMSLQLAEVSQCVLPGNNR-NEIELQFHESDTVEAGTDQLVGVRIYIPPDPDMDPQDNDVQTPAEILQQRIMKMANIKNTTGSVIVEFDESRGTFLTPRGRYTIELYDSFLRMRGNKYDYKIKYDDISKLFLLPKPDDVHMAFVIALDKPIRQGQQRYQMLVMQTTKEQSEVSVNLDEETLQSEYGGDLQPMMYGALSNLVAKTFKVIAKKKVFIPGKFANANQQACVKCALRANEGHLYPLEKQFVFIHKPPVLVRFDEVESVEFQRYAGGQGS--TRNFDLCVTLLNTSGDTGSKEYVFSGIDRSDYTGLYNFLSGKKIKINNFQGVGMEDA 491
BLAST of mRNA_C-linearis_contig80.15920.1 vs. uniprot
Match: A0A7S0TAB4_9STRA (FACT complex subunit SSRP1 n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0TAB4_9STRA) HSP 1 Score: 376 bits (966), Expect = 7.020e-117 Identity = 295/666 (44.29%), Postives = 403/666 (60.51%), Query Frame = 0
Query: 6 IGVQGYSLGNLQLNSDELIWTSS-------DKSSSKKVKWLDVSRATWAQYAAYCHLRLFMKTDASP------VRLDGFSKAQYADIEK-FLSERDVSLSKESPNPGGGNYGNIEVLDNIVSFS-----------------SGNRALFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDE----DTDEPSPAESLQMAVIERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDVSKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATITVNMTAEDLQTKYDGNLNSEMVGPLHNLIAKIFKVLSKKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETA--KPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQ-SGNDKAMLQLGDLD------DHDPYKAALD---DDQGDEXXXXXXADYAPDAPGGSDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKKDKNAPKGAMSAFMQFSQAKRAEVKAENPDMKITEISKVLGEKWRGMDEEGKASFQQKADADKERYQKEMITY 624
IG+ G+S+G + W S+ +++ + + RA W + HLRL + +R DGF A + +++ F + +SK + + G YG ++L + F +G+ + L++ +VSQCV+PG + N+VELQ ESDA + D LV+IR +P E D S AE LQ +++ ANI G V+VEF+ +G+F PRGRYS+E+Y F RM G +YDYKI+Y+D+S+LFLL KPD+ ++AFV++LDKPIRQGQQ+YQ+LVL+T KD I VN+ + L+ +Y +L M G L NL+AK FKV++KK V++ GKFS+ N VKCAL ANEG LYPL K F+FIHKP +I F+E++SVEFQRY G QG+ TRNFDLCV+ K+ A + + YVFSG+DRS+YT LY+FLSTK +RIKN+++ +G + + D D DH+ + + D D+ XXXXXX XXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXAKKD N PK A SAFM FS A RA VK ENPD K E++K+L +++ + ++ A +K + +K+RY++EM Y
Sbjct: 10 IGLHGHSVGTFACGEAGVQWKSALYGRDDTGSGTTRNIPKSLIERAAWTVFGKSGHLRLKVAQQEGKANLHHEMRFDGFPVAAFDNLKDVFQDTYGIEVSKHNISSAGTQYGQSKILGKKLVFQHCILEDADEEGEEFEVRTGDE-MMSLDLAEVSQCVLPGNNR-NEVELQFPESDAIEANNDQLVSIRFYIPPDPEVDPSDRTVKSSAELLQQRIMQMANIRKTTGDVIVEFDLEKGSFLTPRGRYSIELYERFFRMRGQKYDYKIKYDDISRLFLLPKPDDVHMAFVIALDKPIRQGQQRYQYLVLQTNKDPDEIRVNLDEDTLKKEYGDDLQPIMRGSLSNLVAKTFKVIAKKKVFIPGKFSNANQQPCVKCALRANEGLLYPLEKQFVFIHKPPVLIRFNEVESVEFQRYAGGQGS--TRNFDLCVSLKASAASVSNQQEYVFSGVDRSDYTGLYNFLSTKNIRIKNLQEIAGVQEKAAPVYDEDEIYGGPDHEMLEESEDESYDEAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDLEEARGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAGSXXXXXXAKKDPNKPKRAQSAFMIFSNANRARVKEENPDAKFGEMAKLLSAEYKNLSKDELAELDKKVEKEKKRYEREMENY 671
BLAST of mRNA_C-linearis_contig80.15920.1 vs. uniprot
Match: A0A1E7FQX7_9STRA (FACT complex subunit SSRP1 (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FQX7_9STRA) HSP 1 Score: 372 bits (955), Expect = 2.470e-116 Identity = 274/604 (45.36%), Postives = 376/604 (62.25%), Query Frame = 0
Query: 40 DVSRATWAQYAAYCHLRLFM-----KTDASPVRLDGFSKAQYADIEKFLSER-DVSLSKESPNPGGGNYGNIEVLDNIVSFS-------SGNRALFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDE----DTDEPSPAESLQMAVIERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDVSKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATITVNMTAEDLQTKYDGNLNSEMVGPLHNLIAKIFKVLSKKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETA--KPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQSGNDKAMLQLGDLDDHDPYKAALDDDQGDEXXXXXXADYAPDAPGGSDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKKDKNAPKGAMSAFMQFSQAKRAEVKAENPDMKITEISKVLGEKWRGMDEEGKASFQQKADADKERYQKEMITY 624
++ +A W + HLR+ + K S +R DGF A + D++ F E D+ +SK + + G YG ++ + F +G+ + L++ +VSQCV+PG + N+VELQ ESDA + D LV++R+ +P E D + AE LQ +++ ANI G V+VEF+ +G+F PRGRYS+E+Y F RM G +YDYKI+Y+D+S+LFLL KPD+ ++AFV++LDKPIRQGQQ+YQ+LVL+T KD + VN+ + L+ +Y +L M G L NL+AK FKV++KK V++ GKFS+ N VKCAL ANEG LYPL K FIFIHKP +I F+E++SVEFQRY G QG+ TRNFDLCV K+ A + + YVFSGIDRS+YT LY+FLSTK +RIKN+++ A+ Q+ + + D DD + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AKKD N PK A+SA+M +S R VK ENP K +++K++ ++ + + A +++ +KERY +EM Y
Sbjct: 7 NIEKAGWTVFGKSGHLRIGVIVKEGKNGPSELRFDGFPVASFDDLKDFFQENYDIEVSKHNISSAGTQYGQSKISGKKLLFQHCEFEVRTGDE-MMSLDLGEVSQCVLPGNNR-NEVELQFPESDAIEANNDQLVSVRLYIPPDPEVDPSDKTAKTSAELLQHRIMQMANIRKTTGDVIVEFDLEKGSFLTPRGRYSIELYERFFRMRGQKYDYKIKYDDISRLFLLPKPDDVHMAFVIALDKPIRQGQQRYQYLVLQTNKDPDEVRVNLDEDTLKKEYGDDLQPIMRGSLSNLVAKTFKVIAKKKVFIPGKFSNANQQPCVKCALRANEGLLYPLEKQFIFIHKPPVLIRFNEVESVEFQRYAGGQGS--TRNFDLCVTLKASAASISNQQEYVFSGIDRSDYTGLYNFLSTKSIRIKNLQEISG--AVEQVAPVYNEDEIYGGPADDM--------------EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVADIPSPTISKKKAKKDPNKPKQALSAYMVYSNLNRERVKKENPSAKFGDMAKLIAADYKKLSGDELADVEKRVIKEKERYAREMKDY 590
BLAST of mRNA_C-linearis_contig80.15920.1 vs. uniprot
Match: K0SUI2_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SUI2_THAOC) HSP 1 Score: 375 bits (963), Expect = 4.590e-116 Identity = 277/665 (41.65%), Postives = 399/665 (60.00%), Query Frame = 0
Query: 6 IGVQGYSLGNLQLNSDELIWTSS----DKSSSKKVKWLD-VSRATWAQYAAYCHLRLFMKTDA--------SPVRLDGFSKAQYADIEKFLSER-DVSLSKESPNPGGGNYGNIEVLDNIVSFSSGNRA----------------LFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDE----DTDEPSPAESLQMAVIERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDVSKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATITVNMTAEDLQTKYDGNLNSEMVGPLHNLIAKIFKVLSKKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETA--KPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQSGNDKAMLQLGDLDDHDPYKAALDDDQGDEXXXXXXADYAPDAP---------GGSDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKKDKNAPKGAMSAFMQFSQAKRAEVKAENPDMKITEISKVLGEKWRGMDEEGKASFQQKADADKERYQKEMITYN 625
IG+ G+++G ++W SS D +K+V + +S A W + HLR+ K + +R DGF Y + + L + V+L + S + G ++GN ++ + + F N + L++ +VSQCV+PG + N++E+Q ESD + D LVA+R +P + D D P+ AE+LQ +++ A++ G ++ EF+E +GTF PRGRYS+E+Y F+R+ G++YDYKI+Y+D+S+LFLL + D+ VAFV++LDKPIRQGQQ+Y LV++ TK+ + + +N+ L+ +Y G + M G NL+AK FKV+++K V++ GKF+++N VKCAL ANEGHLYPL K FIFIHKP +I FDEI+SVEFQRY G QG+ TRNFDLCV+ S G++A K Y FSGID+S Y +LYSFLS KK++IKN++ G + D+ DD++ D+ A + D+ G + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXX +D NAPK SA++ F+ AKR+E+K NPD +ISK+LG+ ++ + + K + + A DK RY++EM Y+
Sbjct: 11 IGLYGHAVGTFSATRHGIMWKSSVMGNDDIETKRVLPRESISGALWTVFGKSGHLRVLTKAPREGEQTKLPAAMRFDGFPGTDYEAMSEALRDLFGVTLKRHSMSSAGSSWGNTDISNKHLVFRQCNLEDADEDGQEFEPRDGDEMMSLDLGEVSQCVLPGNNR-NEIEMQFLESDTVEAGTDQLVALRFYVPPDADADPTDKDAPTSAEALQSRIMQIASVKKTSGSIIAEFDEGKGTFLTPRGRYSIELYDSFLRLRGAKYDYKIKYDDISRLFLLPRQDDMTVAFVIALDKPIRQGQQRYNMLVMQCTKEHSELNINLDEATLEKEYGGQIEQHMNGSFSNLVAKTFKVITRKKVFIPGKFANSNQQACVKCALRANEGHLYPLEKQFIFIHKPAVLIRFDEIESVEFQRYAGGQGS--TRNFDLCVSLHSTPGDSASTKEYTFSGIDKSNYAALYSFLSGKKIKIKNLEGVGEEPKKPGAPRYDER-----MSDDEESDDSDFDENAPKSDDSXXXXXXXXDLGSVVSDDSDLAEHRKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPSXXXXXXRDPNAPKAPKSAYVFFTSAKRSEIKEANPDAGFGDISKLLGKAYKELSDAEKEPYDEMARKDKARYKREMEDYD 667
BLAST of mRNA_C-linearis_contig80.15920.1 vs. uniprot
Match: W7TS58_9STRA (FACT complex subunit SSRP1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TS58_9STRA) HSP 1 Score: 365 bits (938), Expect = 3.170e-114 Identity = 270/657 (41.10%), Postives = 380/657 (57.84%), Query Frame = 0
Query: 3 FAKIGVQGYSLGNLQLNSDELIWTSSDKSSSKKVKWLDVSRATWAQYAAYCHLRLFMKTDASPVRLDGFSKAQYADI-EKFLSERDVSLSKESPNPGGGNYGNIEVLDNIVSFSSGNRALFDLNIKDVSQCVMPGVKK-SNDVELQLHESDATDQTEDTLVAIRVTLPEKDEDTDEPSPAESLQMAVIERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDVSKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATITVNMTAEDLQTKYDGNLNSEMVGPLHNLIAKIFKVLSKKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETAKPYVFSGIDRSEYTSLYSFLSTKK-LRIKNIKQSGNDKAMLQLGDLDD-----------HDPYKAALDDDQGDEXXXXXXADYAPDAPGGSDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKK-----------DKNAPKGAMSAFMQFSQAKRAEVKAENPDMKITEISKVLGEKWRGMDEEGKASFQQKADADKERYQKEMITYNAKKAAEPPE 634
F IG+ G S+G L L W S++K V+ D+ RA+W+ + + HLRLF+K + +R DGF + + + E F S +SL +E N GG NYG++ DN + S ++ + +L + VSQCV+PG N+VELQ E+DA D+ EDTLV +R +P +E+ D AE+ Q V+ R + G LV F E +G F +PRGRY + +Y++ R+HG++YD+K+ Y+D+ FLLE+PD R+ AFV+ L KPIRQGQQ+Y +LVL+T + +TVNMT E+L+ KY+ L M GP+H+L+AK FK+LS K VY + +F S + VKC+L A+EG LYPL+K+F+FI+KPT I F +I+SV F R GGA GVTR FDL V + + G+ + Y+F+ I++ E+ +L +L K+ +++ + K K L + ++ YK ++ G XXXXXX S A XXXXXXXXXXXXXXXXXXXXXXXXX K D NAPK A+SA+M F+QA R VKAE P +K+TEISKV+GE+WR + E K F+ +A + K RY +E+ Y AKK E E
Sbjct: 7 FENIGLSGQSVGTLTFTGKGLEWRG--PSNAKTVQAKDILRASWSVFGKWGHLRLFLK-NGKALRCDGFLRTEEERVREVFQSNYSLSLEREVLNSGGANYGDLIFEDNTLVMSLEDKPVLELPLGAVSQCVLPGTGNIKNEVELQFVETDAADRDEDTLVEVRFYIPPGEEEDD---GAEAFQKNVLARTTVQASTGDALVTFAEDEGFFLYPRGRYVINLYTNSFRLHGAKYDHKMAYDDIIHFFLLERPDHRW-AFVIGLKKPIRQGQQRYNYLVLQTHDGASEVTVNMTEEELREKYEDRLEQTMAGPMHHLVAKTFKILSGKKVYHSQRFQSARNVRWVKCSLKASEGLLYPLDKAFMFIYKPTLYIPFKDIESVSFDRVGGA--VGVTRTFDLRVLLRPLDGDVRREYIFAQIEKEEHANLSQYLRDKQTIKVIDDKPVSQAKIDRMLEEEEEGGXXXXXXXXXXXSYKG---EESGSXXXXXXXXXXXXXXXXSSGAEMVEESDLEEMTGIKKEKXXXXXXXXXXXXXXXXXXXXXXXXXSDAGTGGKKRKGKKEKXXXXXXXXXXXXDPNAPKQALSAYMLFTQASREAVKAEQPGLKVTEISKVMGERWRALSAEEKKVFEDQAASAKVRYGEELRAYKAKKKEEAAE 651 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig80.15920.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_C-linearis_contig80.15920.1 ID=prot_C-linearis_contig80.15920.1|Name=mRNA_C-linearis_contig80.15920.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=644bpback to top |