prot_C-linearis_contig80.15868.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig80.15868.1
Unique Nameprot_C-linearis_contig80.15868.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length739
Homology
BLAST of mRNA_C-linearis_contig80.15868.1 vs. uniprot
Match: D7FS06_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS06_ECTSI)

HSP 1 Score: 777 bits (2007), Expect = 3.410e-270
Identity = 454/743 (61.10%), Postives = 492/743 (66.22%), Query Frame = 0
Query:    1 MDGAGSSNAGE----EGDYDDEPVLKYQRMGADVGSLLSGSAXXXXXXXXXXXXXXXXXXXXXXXTVVRMAVHDTCLVFGTATGTILLTDYHGNETRRVRPHKKARGRCLFFLISRSWVSVCSEDGTVVVTGLQPGPNGEQPPPEVYSYGAKWPMLAVKLDPLYARRKDKTFVAGGTAGKLLLNKKGWLGHDEIVLHKGEGPVSAIAWRGPLVAWASDGGLKIMDVDKGKAGERISYVDKPRSLVDFKEHECRCHMLWETPTRLLVGWGDTVMVLQILVREPKYQRSGGSLSPVRHHXXXXXXXXXXXXXXXXXXXXXYGNAGVTNRRTSVPLTNPIGGGLPMAVIGAPTASTPASLEAPERYTQIVAVWQSDCLVCGLSPFDSDTLILLGYPVEEXXXXXXXXXXXXXXXXXXERVKVWGGARGLFQPEVQLVKRHNGEVISADTVPLRGWESAAAGQLLLRSTCWSTSSFRPDKEGATTVYHTPAAAEATGVRGLPPASFVMAPRDLIVARVRDIDDKVSWALGKRDFSGAVAVALEQRHLLRRHDFQEIVAKHLDDLMSRGEFDLAASECPRLLVGDAMAWERWIYGFARRRRLSAVVPFVPTTEPRLPPSVYEVVLEHLMLTEPQLFLETLRRWGHPRGKHGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--PPEAQQ-DLYSLPVMMARMEASLVRKPDPVIMEAHAEAYVMDRQFARAIRAYLALAKHRPASEGG 736
            MDGAGSS        E DYDDEPVLKYQRMGADVG LL                           TVVRMAVHDTCLVFG A+G ILLTDYHGNE RR+RPH KA    L   I+  +++  SEDGTVVVTGLQPG NGE   PEVYSYGAKWPMLAVKLDPLYARRKDKTFVAGG+AGKLLLNKKGWLGHDE+VLHKGEGP+SAIAWRGPLVAWASDGGLKIMDVDKGK GERISYVDKPRSLVDFKEHECRCHMLWETPTRLLVGWGDTVMVLQILVREPKYQR GGSLSP++                        G+AG +NRRTSVPLTNPIGGGLPMAVIGAPTA+ P +LEAPERYTQIVAVWQSDCL+CGLSPFDSDT++LLG+PVEEXXXXXXXXXX                A+G+FQPEVQLVKR +GEVISADTVPLRGWE A AGQLLLRSTCWS SS++PD+EGATTV++TPA AEATGVRGLPPA+FVM+P DLIVARVRDIDDKV                   R     H F                                                SA +P                                  RWGHPRGKHGG                               PPE QQ DLYSLPV+MARMEASLV++PDPV+MEAHAEAYVMDRQFARA+R YL+LA+H+ ASE G
Sbjct:    1 MDGAGSSXXXXXXXPEADYDDEPVLKYQRMGADVGKLLG---------------PVEEEEAGEKETVVRMAVHDTCLVFGMASGMILLTDYHGNEARRLRPHTKAVTD-LSMDITGDFLASSSEDGTVVVTGLQPGANGEHTAPEVYSYGAKWPMLAVKLDPLYARRKDKTFVAGGSAGKLLLNKKGWLGHDEVVLHKGEGPLSAIAWRGPLVAWASDGGLKIMDVDKGKGGERISYVDKPRSLVDFKEHECRCHMLWETPTRLLVGWGDTVMVLQILVREPKYQR-GGSLSPMKQPHLSPQGGN--------------GSAGDSNRRTSVPLTNPIGGGLPMAVIGAPTAAAPVALEAPERYTQIVAVWQSDCLICGLSPFDSDTVVLLGFPVEEXXXXXXXXXXGEGVV-----------AKGVFQPEVQLVKRQSGEVISADTVPLRGWEHAGAGQLLLRSTCWSISSYKPDREGATTVFYTPAEAEATGVRGLPPATFVMSPEDLIVARVRDIDDKV---------------CSPPRDAQNMHTF------------------------------------------------SACLP--------------------------------RERWGHPRGKHGGQHGGRATASRIAPGERSGGAGGIAAAGKSESPPEVQQQDLYSLPVVMARMEASLVQRPDPVVMEAHAEAYVMDRQFARAVRVYLSLAEHQAASENG 606          
BLAST of mRNA_C-linearis_contig80.15868.1 vs. uniprot
Match: A0A6H5KF08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF08_9PHAE)

HSP 1 Score: 474 bits (1220), Expect = 5.190e-160
Identity = 254/320 (79.38%), Postives = 268/320 (83.75%), Query Frame = 0
Query:  119 SEDGTVVVTGLQPGPNGEQPPPEVYSYGAKWPMLAVKLDPLYARRKDKTFVAGGTAGKLLLNKKGWLGHDEIVLHKGEGPVSAIAWRGPLVAWASDGGLKIMDVDKGKAGERISYVDKPRSLVDFKEHECRCHMLWETPTRLLVGWGDTVMVLQILVREPKYQRSGGSLSPVR--HHXXXXXXXXXXXXXXXXXXXXXYGNAGVTNRRTSVPLTNPIGGGLPMAVIGAPTASTPASLEAPERYTQIVAVWQSDCLVCGLSPFDSDTLILLGYPVEEXXXXXXXXXXXXXXXXXXERVKVWGGARGLFQPEVQLVKRHNGE 436
            SEDGTVVVTGLQPG NGE   PEVYSYGAKWPMLAVKLDPLYARRKDKTFVAGG AGKLLLNKKGWLGHDE+VLHKGEGPVS++AWRGPLVAWASDGGLKIMDVDKGK GERISYVDKPRSLVDFKEHECRCHMLWETPTRLLVGWGDTVMVLQILVREPKYQR GGSLSP+R  HH                      G+AG  NRRTSVPLTNPIGGGLP+AVIGAPTA+ P +LEAPERYTQIVAVWQSDCL+CGLSPFDSDT++LLGYPVE XXXXXXXXXXXX               +G+FQPEVQLVKR +GE
Sbjct:   29 SEDGTVVVTGLQPGANGEHTAPEVYSYGAKWPMLAVKLDPLYARRKDKTFVAGGAAGKLLLNKKGWLGHDEVVLHKGEGPVSSVAWRGPLVAWASDGGLKIMDVDKGKGGERISYVDKPRSLVDFKEHECRCHMLWETPTRLLVGWGDTVMVLQILVREPKYQR-GGSLSPMRQPHHSPPGGN----------------GSAGDNNRRTSVPLTNPIGGGLPIAVIGAPTAAAPVALEAPERYTQIVAVWQSDCLICGLSPFDSDTVVLLGYPVEXXXXXXXXXXXXXVV------------VKGVFQPEVQLVKRQSGE 319          
BLAST of mRNA_C-linearis_contig80.15868.1 vs. uniprot
Match: A0A836CBT2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBT2_9STRA)

HSP 1 Score: 308 bits (788), Expect = 3.130e-86
Identity = 295/1011 (29.18%), Postives = 382/1011 (37.78%), Query Frame = 0
Query:   66 MAVHDTCLVFGTATGTILLTDYHGNETRRVRPHKKARGRCLFFLISRSWVSVCSEDGTVVVTGLQPGPNGEQPPP------------------------------------EVYSYGAKWPMLAVKLDPLYARRKDKTFVAGGTAGK-----------------------------------------LLLNKKGWLGHDEI--------------VLHKGEGPVSAIAWRGPLVAWASDGGLKIMDVDK-------------------------------------------------------------------------------GKAG-------------------------ERISYVDKPRSLVDFKEHECRCHMLWETPTRLLVGWGDTVMVLQILVREPKYQRSGGSLSPVRHHXXXXXXXXXXXXXXXXXXXXXYGNAGVTNR-RTSVPLTNPIGGGLPMAVIGAPTASTPASLEAPERYTQIVAVWQSDCLVCGLSPFDSDTLILLGYPVEEXXXXXXXXXXXXXXXXXXERVKVWGGARGLFQPEVQLVKRHNGE---------------------VISADTVPLRGWESAAAGQLLLRSTCWSTSSFR-----PDKEGATTVYHTPAAAEATG-------VRGLPPASFVMAP---------------------------------------------------------RDLIVARVRDIDDK-------------VSWALGKRDFSGAVAVALEQRHLLRRHDFQEIVAKHLDDLMSRGEFDL---------------AASECPRLLVGDAMAWERWIYGFARRRRLSAVVPFVP-------------TTEPRLPPSVYEVVLEHLMLTEPQLFLETLRRWGHPRGKHGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPEAQQDLYSL-PVMMARMEAS----------------LVRKPDPVIMEAHAEAYVMDRQFARAIRAYLALAKHRPA 732
            +A+HD C           LTD+HGN +RR+RPH+ A    +    S  +V+ CS+DGTVVVT LQ    G                                         EVY+YGA  P+ AV+LDPLYARR+DK F+AGGTAGK                                         L+LNK+GW  H E               VLH+GEG VSAIAWRG LVAWA+  G+KIMDVDK                                                                                K G                         E +S VDKPR  +            WE+ + LL+ WGDT ++LQ+ +RE       GS +                             AG+  R RTS   T+ + G L   V+        A+  AP+R  +I A+WQSDCL+CG+SPFD+DTL+LLGYPV +                     +    A G   PEVQLV+R  GE                     V++ADT+PL GW++  AG   + ST WS  + R       + GA +  H   AA             GLPPA F+ AP                                                         RDL+VARVRD+DD              V+WAL + D   AV VAL  RH LR H ++++VA+ L++LM  G +++               AA+E P LL  DA AWE+WIY FARR RL A+ P VP                 RL  SVY ++LEHL+  +P LFLET+RRWGHPR                                     A + LYSL P+MMA                     L  +    ++EA AE  ++DRQF RA+ AYL +A+ R A
Sbjct:   17 VALHDACXXXXXXXXXXXLTDFHGNLSRRLRPHRGAI-HDISIDASGEFVASCSQDGTVVVTSLQHDNGGXXXXXGADSECCLTIDIHLTFMTVLGADRASXXXXXXDRSEEVYTYGA--PVAAVRLDPLYARRRDKVFIAGGTAGKVASSLMTLVFDARDSTVHLGXXXXXXXXXXXXXXXXXXXXXLMLNKRGWSSHKEALXXXXXXXXXXXXXVLHEGEGAVSAIAWRGSLVAWANGRGVKIMDVDKIMDVDKVRALLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKFFFAXXXXXXXXXXXXXXXXXXXDKMKCGAACSKVLLXXXXXXXXXXXXAVSDEEPVSAVDKPRGALH-----------WESDSCLLMAWGDTFLILQVGIRE-------GSTA-----------------------------AGLLERVRTSSEGTS-LAGTLEGGVV--------AARMAPKRVAEITALWQSDCLICGVSPFDADTLVLLGYPVPQSLA----------------EAREAAAAAG---PEVQLVRRATGENPGRRVVGHAELVHQLEELRSVLAADTLPLNGWQNNLAGHYCMASTSWSPGAIRWPRGKAAQAGAASAMHINTAAAXXXXXXXXXTTAGLPPALFIAAPQSAPHQHLLRDFLRLPFSDPHRLSAPQARDAACAAPLPGVARAPPMRRARDADLVVARDLVVARVRDVDDSXXXXXXXXXXXXXVAWALQRGDAGAAVRVALRNRHSLRTHSYRDLVARRLEELMGEGRYEVXXXXXXXXXXXXXXXAAAETPLLLGSDAAAWEQWIYAFARRGRLDAIAPHVPPLPEQEGGGEALPAASLRLAGSVYMLILEHLLTAKPPLFLETVRRWGHPRDAAAAARRAEVSTADTAASAPSRQAQGVA--------AAKALYSLSPLMMAXXXXXXXXXXXXXXXXXXXXXLRARLGAHVLEAQAELLLLDRQFERAVGAYLTMARVRAA 941          
BLAST of mRNA_C-linearis_contig80.15868.1 vs. uniprot
Match: A0A061RHQ1_9CHLO (Vacuolar protein sorting-associated protein 41 (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RHQ1_9CHLO)

HSP 1 Score: 266 bits (681), Expect = 1.280e-75
Identity = 199/643 (30.95%), Postives = 293/643 (45.57%), Query Frame = 0
Query:   14 DYDDEPVLKYQRMGADVGSLLSGSAXXXXXXXXXXXXXXXXXXXXXXXTVVRMAVHDTCLVFGTATGTILLTDYHGNETRRVRPHKKARGRCLFFLISRSWVSVCSEDGTVVVTGLQPGPNGEQPPPEVYSYGAKWPMLAVKLDPLYARRKDKTFVAGGTAGKLLLNKKGWLGHDEIVLHKGEGPVSAIAWRGPLVAWASDGGLKIMDVDKGKAGERISYVDKPRSLVDFKEHECRCHMLWETPTRLLVGWGDTVMVLQILVREPKYQRSGGSLSPVRHHXXXXXXXXXXXXXXXXXXXXXYGNAGVTNRRTSVPLTNPIGGGLPMAVIGAPTASTPASLEAPERYTQIVAVWQSDCLVCGLSPFDSDTLILLGYPVEEXXXXXXXXXXXXXXXXXXERVKVWGGARGLFQPEVQLVKRHNGEVISADTVPLRGWESAAAGQLLLRSTCWSTSSFRP----------DKEGATTVYHTPAAAEATG----------VRGLPPASFVMAPRDLIVARVRDIDDKVSWALGKRDFSGAVAVALEQRHLLRRHDFQEIVAKHLDDLMSRGEFDLAASECPRLLVGDAMAWERWIYGFARRRRLSAVVPFVPTTEPRLPPSVYEVVLEHLM--LTEPQLFLETLRRW 634
            D +DEP LKY R+G+    LLS +A                           M V D  +  GT  G + L DY+GNE RR   HK A    L F     +++ CS+DG+V V  L           E        P+  V LDP Y+ RKD+     G AG+L+LN +GWLG  +IVLHKGEGP+  + W G L+AWA+D G+K+ D        RI ++++PR +    +H   C + WE+ T L +GWG  V+V +I+  +    R G ++S                                                 P  V+G P  +   +L +P RY +IVA + +D +V G++PF  D  IL   P E                          GA    +PE+++V   N ++ S D + L G+E  AA       T +S ++F P             GA +     +A+ A G            GL P  +V++P+D+++ R RD +D+V+W L K+ F  A+ + LE     R    +++   +L+ L +  +F+ AAS CPRLL G+A AWERW+Y FAR R+L A+ P +P  EPRL  + YEVVL   +  +     FL  +R W
Sbjct:   18 DGEDEPRLKYVRLGSSCADLLSRAAASC------------------------MQVEDKMIALGTQQGGVHLLDYNGNEIRRFDSHKAAVND-LSFDAKSEFIASCSDDGSVAVHSLFSD--------ETTRLQYSRPIKTVALDPNYSSRKDRQVACAGLAGQLVLNSRGWLGPKDIVLHKGEGPIQRLRWSGSLIAWANDKGIKVYDT---AVHHRIGFIERPR-VQPPGDHTSTCSLFWESDTLLYIGWGSRVLVARIVHEDDG--RGGKAVSDD-----------------------------------------------PWKVLGGPAKAV--ALGSPSRYVEIVADFGTDYIVAGVAPFGHDLAILAYVPAESAEGPGGAPPPD-------------SGALAA-RPELRIVSWDNQDIAS-DALSLHGFEHYAA-------TDYSLAAFHPMVCRGRAPASRAAGAGSASSGNSASSAPGRFARQPTKWWSDGLEPLYYVVSPKDIVLGRPRDGEDRVAWMLEKKRFEEALRL-LESGEAARETTREKVAQAYLEHLFNTSQFERAASLCPRLLQGNAAAWERWVYMFARARQLPALAPHIPVEEPRLRSTAYEVVLTSFLPSVENHAGFLSLVRSW 549          
BLAST of mRNA_C-linearis_contig80.15868.1 vs. uniprot
Match: A0A061RNR9_9CHLO (Vacuolar protein sorting-associated protein 41 n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RNR9_9CHLO)

HSP 1 Score: 265 bits (676), Expect = 2.190e-75
Identity = 195/623 (31.30%), Postives = 286/623 (45.91%), Query Frame = 0
Query:   14 DYDDEPVLKYQRMGADVGSLLSGSAXXXXXXXXXXXXXXXXXXXXXXXTVVRMAVHDTCLVFGTATGTILLTDYHGNETRRVRPHKKARGRCLFFLISRSWVSVCSEDGTVVVTGLQPGPNGEQPPPEVYSYGAKWPMLAVKLDPLYARRKDKTFVAGGTAGKLLLNKKGWLGHDEIVLHKGEGPVSAIAWRGPLVAWASDGGLKIMDVDKGKAGERISYVDKPRSLVDFKEHECRCHMLWETPTRLLVGWGDTVMVLQILVREPKYQRSGGSLSPVRHHXXXXXXXXXXXXXXXXXXXXXYGNAGVTNRRTSVPLTNPIGGGLPMAVIGAPTASTPASLEAPERYTQIVAVWQSDCLVCGLSPFDSDTLILLGYPVEEXXXXXXXXXXXXXXXXXXERVKVWGGARGLFQPEVQLVKRHNGEVISADTVPLRGWESAAAGQLLLRSTCWSTSSFRP----------DKEGATTVYHTPAAAEATG----------VRGLPPASFVMAPRDLIVARVRDIDDKVSWALGKRDFSGAVAVALEQRHLLRRHDFQEIVAKHLDDLMSRGEFDLAASECPRLLVGDAMAWERWIYGFARRRRLSAVVPFVPTTEPRLPPSVYEVVL 616
            D +DEP LKY R+G+    LLS +A                           M V D  +  GT  G + L DY+GNE RR   HK A    L F     +++ CS+DG+V V  L           E        P+  V LDP Y+ RKD+     G AG+L+LN +GWLG  +IVLHKGEGP+  + W G L+AWA+D G+K+ D        RI ++++PR +    +H   C + WE+ T L +GWG  V+V +I+  +    R G ++S                                                 P  V+G P  +   +L +P RY +IVA + +D +V G++PF  D  IL   P E                          GA    +PE+++V   N ++ S D + L G+E  AA       T +S ++F P             GA +     +A+ A G            GL P  +V++P+D+++ R RD +D+V+W L K+ F  A+ + LE     R    +++   +L+ L +  +F+ AAS CPRLL G+A AWERW+Y FAR R+L A+ P +P  EPRL  + YEVVL
Sbjct:   18 DGEDEPRLKYVRLGSSCADLLSRAAASC------------------------MQVEDKMIALGTQQGGVHLLDYNGNEIRRFDSHKAAVND-LSFDAKSEFIASCSDDGSVAVHSLFSD--------ETTRLQYSRPIKTVALDPNYSSRKDRQVACAGLAGQLVLNSRGWLGPKDIVLHKGEGPIQRLRWSGSLIAWANDKGIKVYDT---AVHHRIGFIERPR-VQPPGDHTSTCSLFWESDTLLYIGWGSRVLVARIVHEDDG--RGGKAVSDD-----------------------------------------------PWKVLGGPAKAV--ALGSPSRYVEIVADFGTDYIVAGVAPFGHDLAILAYVPAESAEGPGGAPPPD-------------SGALAA-RPELRIVSWDNQDIAS-DALSLHGFEHYAA-------TDYSLAAFHPMVCRGRAPASRAAGAGSASSGNSASSAPGRFARQPTKWWSDGLEPLYYVVSPKDIVLGRPRDGEDRVAWMLEKKRFEEALRL-LESGEAARETTREKVAQAYLEHLFNTSQFERAASLCPRLLQGNAAAWERWVYMFARARQLPALAPHIPVEEPRLRSTAYEVVL 529          
BLAST of mRNA_C-linearis_contig80.15868.1 vs. uniprot
Match: A0A7S0TL93_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TL93_HEMAN)

HSP 1 Score: 263 bits (671), Expect = 2.710e-73
Identity = 187/708 (26.41%), Postives = 304/708 (42.94%), Query Frame = 0
Query:   19 PVLKYQRMGADVGSLLSGSAXXXXXXXXXXXXXXXXXXXXXXXTVVRMAVHDTCLVFGTATGTILLTDYHGNETRRVRPHKKARGRCLFFLISRSWVSVCSEDGTVVVTGLQPGPNGEQPPPEVYSYGAKWPMLAVKLDPLYARRKDKTFVAGGTAGKLLLNKKGWLGHDEIVLHKGEGPVSAIAWRGPLVAWASDGGLKIMDVDKGKAGERISYVDKPRSLVDFKEHECRCHMLWETPTRLLVGWGDTVMVLQILVREPKYQRSGGSLSPVRHHXXXXXXXXXXXXXXXXXXXXXYGNAGVTNRRTSVPLTNPIGGGLPMAVIGAPTASTPASLEAPERYTQIVAVWQSDCLVCGLSPFDSDTLILLGYPVEEXXXXXXXXXXXXXXXXXXERVKVWGGARGLFQPEVQLVKRHNGEVISADTVPLRGWESAAAGQLLLRSTCWSTSSFRPDKEGATTVYHTPAAAEATGVRGLPPASFVMAPRDLIVARVRDIDDKVSWALGKRDFSGAVAVALEQRHLLRRHDFQEIVAKHLDDLMSRGEFDLAASECPRLLVGDAMAWERWIYGFARRRRLSAVVPFVPTTEPRLPPSVYEVVLEHLMLTEPQLFLETLRRWGHPRGKHGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPEAQQDLYSLPVMMARMEASLVRKPDPVIMEAHAEAYVMDRQFARAIRAYLAL 726
            P LKYQR+G  V  +L                               + VH+  +  GT  G I + D+ G E RR   H        F     S ++ CS+DGTVV+ GL           E  S+  + P+  + L   ++R+  + F +GG AG+LLLN+KGW  + + V+H GEGP+ AIAW   L+AWA+D G+K+ D     +G+RI+Y+D+P+       H  +CH+ WETP+ LL+GW D V + Q+  R+P   R GG                                                                      P++Y +IV  + +D  +CG++P + + L++L + V++                  E     G AR    PE+++V R N EV S+D + + G+ES  A              +R     ++ ++                  F+++P+D++VA+ RD+DD +SW L ++ F  AV  A +   LL+RH  Q+I  KH++ L+  GE+D AA+ CPRLL  +A  W +W+  F + ++   +VP++P   P+LP   Y  +L H + ++  L    +  W                                             +YS+PV++  ++  L RK DP++ EA A+  +    F +A++ Y  L
Sbjct:   18 PQLKYQRLGNSVPEILKREHASA------------------------VHVHEKYVALGTREGWIYILDFQGVEIRRFGAHTAVVNDLCFDKAGES-IASCSDDGTVVINGLYSA--------ECESFTYQRPVTTLALHSQFSRKGVRQFASGGLAGQLLLNEKGWFTNKDKVVHSGEGPIHAIAWSDTLIAWANDFGVKVYD---SVSGQRITYIDRPKGSPRADLH--KCHLCWETPSMLLIGWADFVKIAQVKERQP---RDGG---------------------------------------------------------------------VPQKYVEIVCFFHTDYFICGIAPLNGN-LVVLAFVVDD------------------EAPPGSGAAR----PELRIVARSNDEV-SSDALSMHGFESLTAKD------------YRMAPLASSKLF------------------FIVSPKDVVVAKSRDMDDHISWLLDRKRFGEAVKEAEQHPDLLKRHKLQDIGEKHIEQLLEEGEYDQAAALCPRLLKENASLWVKWVDAFTKAQQQHVIVPYIPLRNPQLPQDSYNTLLLHFLGSDLALLNRLVTEW------------------------------------------PSSVYSVPVVIEAVKRQLERKEDPLLFEALAQLNLYAGHFDKALQIYFKL 519          
BLAST of mRNA_C-linearis_contig80.15868.1 vs. uniprot
Match: A0A8J9SCR4_9CHLO (Vacuolar protein sorting-associated protein 41 homolog n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9SCR4_9CHLO)

HSP 1 Score: 261 bits (666), Expect = 2.650e-71
Identity = 196/640 (30.63%), Postives = 295/640 (46.09%), Query Frame = 0
Query:   16 DDEPVLKYQRMGADVGSLLSGSAXXXXXXXXXXXXXXXXXXXXXXXTVVRMAVHDTCLVFGTATGTILLTDYHGNETRRVRPHKKARGRCLFFLISRSWVSVCSEDGTVVVTGLQPGPNGEQPPPEVYSYGAKWPMLAVKLDPLYARRKDKTFVAGGTAGKLLLNKKGWLGHDEIVLHKGEGPVSAIAWRGPLVAWASDGGLKIMDVDKGKAGERISYVDKPRSLVDFKEHECRCHMLWETPTRLLVGWGDTVMVLQILVREPKYQRSGGSLSPVRHHXXXXXXXXXXXXXXXXXXXXXYGNAGVTNRRTSVPLTNPIGGGLPMAVIGAPTASTPASLEAPERYTQIVAVWQSDCLVCGLSPFDSDTLILLGYPVEEXXXXXXXXXXXXXXXXXXERVKVWGGARGLF--------QPEVQLVKRHNGEVISADTVPLRGWESAAAGQLLLRSTCWSTSSFRPDKEGATTVYHTPAAAEATGVR----------GLPPASFVMAPRDLIVARVRDIDDKVSWALGKRDFSGAVAVALEQRHLLRRHDFQEIVAKHLDDLMSRGEFDLAASECPRLLVGDAMAWERWIYGFARRRRLSAVVPFVPTTEPRLPPSVYEVVLEHLMLT---EPQLFLETLRRW 634
            ++EP LKYQR+G DV  LL  +A                           ++V D  L  GT +G + + DY GNE +R+  HK      + F  +  +++ CS+DGTVV+ G            EV ++  K P+ +V LDP Y  RK + FV GG AG+LLL  KGWLG+ + +LH GEGP+  I W G L++WA+D G+K+ D       +RI+Y+++PRS +  +  + +CHM WE  + L +GW D V V ++    P     GG                                   T+ + SV                                 QIVA +Q D L+ G++PF  D  +L     +E                    ++  G A  L         +PE+++V   N EV S D + + G+E  AA    L +  W     RP   GA      P AA  T  R          G  P  ++++ +D++V R RD DD+V+W L  + F  A+AV L+    L+    +++  ++L+ L+S+  FD AA  C RLL  +A  WERW+Y FA+ R+L A+ P++PT EPRL  + YE+VL   +L+    P+L L+ L +W
Sbjct:   33 EEEPRLKYQRLGCDVAELLGNNAATC------------------------LSVSDKILALGTHSGAVHVLDYIGNEVKRIEAHKGPVNE-ICFDEAVEYIASCSDDGTVVIQGFYTD--------EVTTFKYKRPIKSVALDPRYGSRKTREFVTGGLAGQLLLVSKGWLGNKDTILHSGEGPIQEIKWSGSLISWANDLGVKVYDTT---IHQRIAYIERPRSSL--RHDKLQCHMFWEGDSLLHIGWADCVKVARM---RPVTASLGGQ----------------------------------TDSKHSV---------------------------------QIVASFQMDYLIAGIAPFGEDICLLACALAKEANKT---------------ELEGTGAAEELNGAVPEEAPRPELKIVTWQNEEVAS-DALSIHGYEHYAATDYALAA--WYPR--RPRTPGA------PEAAAGTSGRSTDFTKWWADGDEPLYYIISSKDVVVGRPRDGDDRVAWLLDHKRFDKALAV-LDTNRGLKASTHEQVTQRYLEHLVSQRRFDEAAQVCSRLLKDNAAGWERWVYVFAQLRQLPALAPYIPTKEPRLRQTAYEMVLHSFLLSPADHPRL-LDALLKW 536          
BLAST of mRNA_C-linearis_contig80.15868.1 vs. uniprot
Match: I0Z1S7_COCSC (ARM repeat-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z1S7_COCSC)

HSP 1 Score: 255 bits (651), Expect = 9.680e-70
Identity = 195/635 (30.71%), Postives = 289/635 (45.51%), Query Frame = 0
Query:   13 GDYDDEPVLKYQRMGADVGSLLSGSAXXXXXXXXXXXXXXXXXXXXXXXTVVRMAVHDTCLVFGTATGTILLTDYHGNETRRVRPHKKARGRCLFFLISRSWVSVCSEDGTVVVTGLQPGPNGEQPPPEVYSYGAKWPMLAVKLDPLYARRKDKTFVAGGTAGKLLLNKKGWLGHDEIVLHKGEGPVSAIAWRGPLVAWASDGGLKIMDVDKGKAGERISYVDKPRSLVDFKEHECRCHMLWETPTRLLVGWGDTVMVLQILVREPKYQRSGGSLSPVRHHXXXXXXXXXXXXXXXXXXXXXYGNAGVTNRRTSVPLTNPIGGGLPMAVIGAPTASTPASLEAPERYTQIVAVWQSDCLVCGLSPFDSDTLILLGYPVEEXXXXXXXXXXXXXXXXXXERVKVWGGARGLFQPEVQLVKRHNGEVISADTVPLRGWESAAAGQLLLRSTCWSTSSFRPDKEGATTVYHTPAAAEATGVR----------GLPPASFVMAPRDLIVARVRDIDDKVSWALGKRDFSGAVAVALEQRHLLRRHDFQEIVAKHLDDLMSRGEFDLAASECPRLLVGDAMAWERWIYGFARRRRLSAVVPFVPTTEPRLPPSVYEVVLEHLMLT---EPQLFLETLRRW 634
            GD ++EP LKYQR+G DV  LL  +A                           + V D  L  GT  GT+ + DY GNE +R+  HK      + F  +  +++ CS+DG+VV+ G            E+ +   K P+ +V LDP Y  RK + FV GG AG+LLL   GWLG+ + +LH GEGP+  I W G L++WA+D G+K+ D       +RI+Y+++PRS +  K  + +CHM WE  + L +GW D V V ++                                                      P T         AV GA T S        +R  QIVA +Q D L+ G++PF  D  +L     ++                     +         +PE+++V   N EV S D + + G+E   A    L +  W     RP   GA      P  A  T  R          G  P  ++++ +D++V R RD DD+V+W L  + F  A+AV LE    L+    +++  ++L+ L+S+  FD AA  C RLL  +A  WERW+Y FA+ R+L A+ P++PT EPRL  + YE+VL   +L     P+L L+ L +W
Sbjct:   30 GDTEEEPRLKYQRLGCDVAELLGSNAATC------------------------LCVSDKILALGTHNGTVHVLDYIGNEVKRIEAHKGPVNE-ICFDEAVEYIASCSDDGSVVIQGFYTE--------EITTVKYKRPIKSVALDPRYGSRKTREFVTGGLAGQLLL---GWLGNKDTILHSGEGPIQEIKWSGTLISWANDLGVKVYDTT---IHQRIAYIERPRSSL--KHEKLQCHMFWEGESLLHIGWADCVKVARVR-----------------------------------------------------PAT---------AVSGAQTDS--------KRSLQIVASFQMDYLIAGIAPFGEDICLLACALAKQGDGAEQVEAGTTGDMTAVVPAEAP-------RPELKIVTWQNEEVAS-DALSVHGYEHYEATDYALAA--WYPR--RPRAHGA------PEDAAGTSGRSTDFTKWWADGDEPLYYIISSKDVVVGRPRDGDDRVAWLLDHKHFDKALAV-LETDRGLKASTHEQVTQRYLEYLVSQRRFDEAAQVCARLLKDNAAGWERWVYVFAQLRQLPALAPYIPTKEPRLRQTAYEMVLHSFLLAPADHPRL-LDALLKW 533          
BLAST of mRNA_C-linearis_contig80.15868.1 vs. uniprot
Match: A0A7R9UA10_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UA10_9STRA)

HSP 1 Score: 246 bits (629), Expect = 1.990e-68
Identity = 191/679 (28.13%), Postives = 299/679 (44.04%), Query Frame = 0
Query:   18 EPVLKYQRMGADVGSLLSGSAXXXXXXXXXXXXXXXXXXXXXXXTVVRMAVHDTCLVFGTATGTILLTDYHGNETRRVRPHKKARGRCLFFLISRSWVSVCSEDGTVVVTGLQPGPNGEQPPPEVYSYGAK-----------WPMLAVKLDPLYARRKDKTFVAGGTAGKLLLNKKGWLGHDEIVLHKGEGPVSAIAWRG----PLVAWASDGGLKIMDVDKGKAGERISYVDKPRSLVDFKEHECRCHMLWETPTR-----------------------------LLVGWGDTVMVLQILVREPKYQRSGGSLSPVRHHXXXXXXXXXXXXXXXXXXXXXYGNAGVTNRRTSVPLTNPIGGGLPMAVIGAPTASTPASLEAPERYTQIVAVWQSDCLVCGLSPFDSDTLILLGY--PVEEXXXXXXXXXXXXXXXXXXERVKVWGGARGLFQPEVQLVKRHNGEVISADTVPLRGWESAAAGQLLLRSTCWSTSS-FRPDKEGATTVYHTPAAAEATG---------VRGL----------PPASFVMAPRDLIVARVRDIDDKVSWALGKRDFSGAVAVALEQRHLLRRHDFQEIVAKHLDDLMSRGEFDLAASECPRLLVGDAMAWERWIYGFARRRRLSAVVPFVPT---------TEP----RLPPSVYEVVLE 617
            EP+L+Y+R+G  +G + +  +                        V  +A HD  L  GT +G +++TD +G    ++RPHK A    L   +   +++  S DGTV +  ++  P GE+    V  +G              P+L + LDP +  R+++  V GG  G+L+L+++GW      +LH+GEGPV A+AWRG     L+AW ++ G+KIMD+     GERIS++++P S        CRCH+ W+  T                              L +GW DT+M + ++          G +     H                      G  GVT           +G G     +G P A   +++ A  RY +I  +   +CL+CGL PFD  +L+LLG+  P  E                  E      GA  +FQPE+ ++   NG V+S D +PLRGWE      L L+      ++   P+  GA  +     AA +           V G+          PP   V + RD ++AR+RD DDK+ W L K     AV VA   + LL+RH   +++  +++ L+   +++ AA  C  LL  D   WER++Y FA + +LS + P +PT          +P    RL   +YE+VL+
Sbjct:   16 EPILEYERLGGALGDIFTRDS------------------------VSCVASHDHWLAVGTLSGFVVVTDPNGALFMKLRPHKAAV-TALSTDVRGGYIASASADGTVALFPVRCTPPGEK---LVSVHGTAEEELHIADLGCGPLLCIALDPQFGHRRERMVVVGGDRGQLVLDRRGWFSGRREILHEGEGPVQAVAWRGRGSCALLAWTNEKGVKIMDI---VTGERISFIERPESSYHDDALNCRCHLRWDGSTDGGAALGLPPPQTTADGIDKDRVVNRSQPVLFIGWADTIMRVDVV----------GEVDATSPHRSKAAAGQMSLAP---------GVPGVTKDGNGD--LGGVGAGAVGGDLGDP-ADPHSAVIAGVRYAEISLIITVECLICGLGPFDMSSLVLLGFVPPYSEPKNGRYDAYSDDSNGSDPETE----GALEVFQPELSIIGLPNGHVLSRDALPLRGWEKYDVQDLSLKVHFRRRNAPSAPNPIGAGMLTQAGDAAGSAAPQPPHGGIWVNGVGNSWSYSGAAPPRIVVTSVRDCVLARLRDADDKIDWILSKGQIGAAVEVARTNKRLLKRHSLIQLITDYIEGLLEEEKYEKAADSCVMLLGHDDALWERFVYAFADKGKLSVIAPHLPTGSATYASPPADPAQGFRLKSEIYELVLD 637          
BLAST of mRNA_C-linearis_contig80.15868.1 vs. uniprot
Match: W7TUN1_9STRA (Vacuolar protein sorting-associated protein 41 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TUN1_9STRA)

HSP 1 Score: 253 bits (647), Expect = 8.940e-68
Identity = 188/656 (28.66%), Postives = 281/656 (42.84%), Query Frame = 0
Query:  147 AKWPMLAVKLDPLYARRKDKTFVAGGTAGKLLLNKKGWLG-HDEIVLHKGEGPVSAIAWRGPLVAWASDGGLKIMDVDKGKAGERISYVDKPRSLVDFKEHECRCHMLWETPTRLLVGWGDTVMVLQILVREPKYQRSGGSLSPVRHHXXXXXXXXXXXXXXXXXXXXXYGNAGVTNRRTSVPLTNPIGGGLPMAVIGAPTASTPASLEAPERYTQIVAVWQSDCLVCGLSPFDSDTLILLGYPVEEXXXXXXXXXXXXXXXXXXERVKVWG----------------GARGLFQPEVQLVKRHNGEVISADTVPLRGWESAA--------------------------------AGQLLLRSTCWSTSSFRPDKE----------------GATTVYHTP---------AAAEATGVRGLPPASFVMAPRDLIVARVRDIDDKVSWALGKRDFSGAVAVALEQRHLLRRHDFQEIVAKHLDDLMSRGEFDLAASECPRLLVGDAMAWERWIYGFARRRRLSAVVPFVPTTEPRLPPSVYEVVLEHLMLTEPQLFLETLRRWGHPRGKHGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPEAQQDLYSLPVMMARMEASLVRKPDPVIMEAHAEAYVMDRQ--FARAIRAYLAL 726
            +K P+LAV LDP Y R  +K FV GG  G+L+L +KG+   + E  LH+ EGP++AIAWRG LVAWA++ G+K++DV+     ERI ++ +P   ++ +  + RC +LWE+ T LL+GW DT MVLQI  R P                                        G T  R                       S P+S +   R  ++   W++DC++ GL PFD D++ LLGY                      ER+                     ++ + + E+QL  R  G + S D +P+ G E                                   AG L+ ++      S    K+                G     H P         + A  TG     P   +  P DL+VARVR ++D++ W L K     A+ +AL  RHLL    F  +   +L+ L+++G +  AA+ECPRLL  +A +WERWIY FA RRRL+++ PF+P   PRL  S YE+VL H +  + + FL T+++WG  + K G                                     LY L  +  R+   + + PDP++++AH  AY++ RQ  FA ++  Y  L
Sbjct:  232 SKQPLLAVHLDPGYRRISEKAFVTGGQEGRLVLGRKGFFSSYREETLHENEGPITAIAWRGSLVAWANEEGVKVLDVE---GEERICFLARPE--IEGRSTDLRCSLLWESETSLLIGWFDTFMVLQIKARAP----------------------------------------GTTPERLPPASAASXXXXXXXXXXXXXXPSHPSSAQRGSRVGEMTVRWKADCVISGLWPFDVDSVALLGYVSLVEGEAGEGEAGVQGLERGMERLTTSSQDTTDSDQDPVPGQPPSSKVVCRAELQLRSRREGRLFSGDILPVHGEERVRDSLGFLFASSFGLTCRRVPGPGLWRLPRGLGRAGGLIAKAGAAHAGSQGGSKDATSAGCHLASRGLGDGGGADSSHGPGRGQDLSASSPASDTG-ESFMPVMLIAGPEDLLVARVRGVEDRILWVLQKGAMGAAIELALLNRHLLTHQRFHALATSYLEVLLAQGAYGRAAAECPRLLGEEASSWERWIYTFAARRRLASLAPFIPLESPRLSRSTYEMVLNHFLDCDREAFLSTIKKWGTQQQKFGRGARDEGGVEGRSGG----------------------LYDLEDLSKRVTNIVAQAPDPLLLQAH--AYLLQRQGRFAASLAVYWDL 817          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig80.15868.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FS06_ECTSI3.410e-27061.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KF08_9PHAE5.190e-16079.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CBT2_9STRA3.130e-8629.18Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A061RHQ1_9CHLO1.280e-7530.95Vacuolar protein sorting-associated protein 41 (Fr... [more]
A0A061RNR9_9CHLO2.190e-7531.30Vacuolar protein sorting-associated protein 41 n=2... [more]
A0A7S0TL93_HEMAN2.710e-7326.41Hypothetical protein (Fragment) n=2 Tax=Hemiselmis... [more]
A0A8J9SCR4_9CHLO2.650e-7130.63Vacuolar protein sorting-associated protein 41 hom... [more]
I0Z1S7_COCSC9.680e-7030.71ARM repeat-containing protein n=1 Tax=Coccomyxa su... [more]
A0A7R9UA10_9STRA1.990e-6828.13Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
W7TUN1_9STRA8.940e-6828.66Vacuolar protein sorting-associated protein 41 n=2... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 29..309
e-value: 1.1E-8
score: 36.1
NoneNo IPR availablePANTHERPTHR12616VACUOLAR PROTEIN SORTING VPS41coord: 10..728
NoneNo IPR availablePANTHERPTHR12616:SF1VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 41 HOMOLOGcoord: 10..728
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 61..268

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig80contigC-linearis_contig80:328152..336824 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig80.15868.1mRNA_C-linearis_contig80.15868.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig80 328152..337473 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig80.15868.1 ID=prot_C-linearis_contig80.15868.1|Name=mRNA_C-linearis_contig80.15868.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=739bp
MDGAGSSNAGEEGDYDDEPVLKYQRMGADVGSLLSGSASASASASSAARD
VGDKEKEKEKETVVRMAVHDTCLVFGTATGTILLTDYHGNETRRVRPHKK
ARGRCLFFLISRSWVSVCSEDGTVVVTGLQPGPNGEQPPPEVYSYGAKWP
MLAVKLDPLYARRKDKTFVAGGTAGKLLLNKKGWLGHDEIVLHKGEGPVS
AIAWRGPLVAWASDGGLKIMDVDKGKAGERISYVDKPRSLVDFKEHECRC
HMLWETPTRLLVGWGDTVMVLQILVREPKYQRSGGSLSPVRHHQHHQQHQ
HQHHHSPPGGGGGGYGNAGVTNRRTSVPLTNPIGGGLPMAVIGAPTASTP
ASLEAPERYTQIVAVWQSDCLVCGLSPFDSDTLILLGYPVEEEEEEKEEE
GEVEGDGGGGERVKVWGGARGLFQPEVQLVKRHNGEVISADTVPLRGWES
AAAGQLLLRSTCWSTSSFRPDKEGATTVYHTPAAAEATGVRGLPPASFVM
APRDLIVARVRDIDDKVSWALGKRDFSGAVAVALEQRHLLRRHDFQEIVA
KHLDDLMSRGEFDLAASECPRLLVGDAMAWERWIYGFARRRRLSAVVPFV
PTTEPRLPPSVYEVVLEHLMLTEPQLFLETLRRWGHPRGKHGGQHGGRAT
AGRIAPGERSGGGKGGGAKPDAPPEAQQDLYSLPVMMARMEASLVRKPDP
VIMEAHAEAYVMDRQFARAIRAYLALAKHRPASEGGRTG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf