prot_C-linearis_contig8.15718.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig8.15718.1
Unique Nameprot_C-linearis_contig8.15718.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length616
Homology
BLAST of mRNA_C-linearis_contig8.15718.1 vs. uniprot
Match: A0A6H5JFJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFJ8_9PHAE)

HSP 1 Score: 199 bits (507), Expect = 9.980e-53
Identity = 166/396 (41.92%), Postives = 198/396 (50.00%), Query Frame = 0
Query:    1 MEEDAALRDVVKKALEGKGVLAQIRASLRAAVFTVVDEHERSSGVHLPNPSALDVKHDAWGRLSLQLVADFLKHWQLHQTLSILKLETDLAEGDVLPRAELESIVGSDNLATAVAGIGETKSSGGKSAPVLHQLL---RAVSHGEGNGPXXXXXXXXXXXXXXXXXXXXXXXXXDGHLPGGGAARFSSLSLSFRAGGDLPQRSAQEHKELEEKGDTEDXXXXXXXXXXXXXXXLGAEGNA-PSRVTTRKRRAGDRVG-AGSSVDGVDGEATLASSDARSPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKCSHQVLLPERDGDA------GLVETDPGRYPAASAAAAGEDGNGA-----NHHDGSMDESSYHFSEDAVSVEGAAQSPM 380
            M++DA LRDVVKKALEGKGVLAQIRASLRAAVFTVVDEHER++GVH+PNP+AL VKHD  GRL+LQ+VADFL+HW+LHQTLS+LKLETD+A  D L   EL SIV +     A  G GETK+  GK +PV+ QLL   RA      NG                             LP G AA   S  L     G   +   QE +E EE G                   +G EG+  P RVT RKRR GD  G +G+SV G+   +     DA  P                                        Q    E DGDA      GL+  +  +  AA     GED +G      +H DG MDESSY FSE+  SV+GA + PM
Sbjct:    1 MDDDADLRDVVKKALEGKGVLAQIRASLRAAVFTVVDEHERTAGVHVPNPAALVVKHDTVGRLALQVVADFLEHWELHQTLSVLKLETDMATEDFLSTEELGSIVANG----AAVGKGETKTPDGKPSPVMLQLLAACRAAPRDRENG-----------------------------LPLGAAAADRSERLIGEDKGRKEEEGRQEAEEGEEDG----------GRRGTTWRGVGVEGDGVPPRVTLRKRR-GDHGGTSGTSVSGMGNGS--GGEDANEPAWSVPSEPVSSATAGEREG-------------------DRQSRERENDGDAEESRFGGLLLRE--QPTAADDIYRGEDKSGGQDRWEHHFDGRMDESSYDFSENVESVKGAGEDPM 329          
BLAST of mRNA_C-linearis_contig8.15718.1 vs. uniprot
Match: D8LLY1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLY1_ECTSI)

HSP 1 Score: 105 bits (263), Expect = 2.230e-20
Identity = 198/590 (33.56%), Postives = 247/590 (41.86%), Query Frame = 0
Query:   61 GRLSLQLVADFLKHWQLHQTLSILKLETDLAEGDVLPRAELESIVGSDNLATAVAGIGETKSSGGKSAPVLHQLLRAVSHGEGNGPXXXXXXXXXXXXXXXXXXXXXXXXXDGHLPGGGAARFSSLSLSFRAGGDLPQRSAQEHKELE-EKG--DTEDXXXXXXXXXXXXXXXLGAEGNA-PSRVTTRKRRAGDRVGA-GSSVDGVDGEATLASSDARSPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKCSHQVLLPERDGDAG-------LVETDPGRYPAASAAAAGEDGNGA-----NHHDGSMDESSYHFSEDAVSVEGAAQSPMGVIAAAGMTG--------WHREAWLRDDKYVSRAAAAESASNPPRAAGEEEGSPGYRQSGAGVSRDDSGGSRFSGSGGRGDANTTNGLGDDGXAVXXXXXXXXXVGQ---NSPCGDAGGAQDEYDWDGDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA-------EALLPTGGGGVGDKEEGVLFEAQNPGGVDKEAEQA-ADLGWEAGIGVSAESSVALGLGEDDDVLDPEAYDEIEDAQSV 614
            GRLSLQ+VADFL+HW+LHQTLS+LKLETD+A  D+L   EL SIV +     AV G GE K+  GK++PV+ QLL A                                  +   P G AA  ++ +      GD  +R   EHK  E E+G  + E+               +G EG+  P RVT RKRR GD  G  G+SV G+   +     DA  P                                        Q    E DGDA        L+   P    AA     GED  G      +H DG MDE SY FSE+  SV G  + P+   AA+G+ G                        A  E A    R+   EE     R+ G   SR         G GG GD    NG GD              V +   +S  G      DE++ D  E   XXXXXXXXXXXXXXXXXXXXX             A       EALL    GG G  ++G+     + G V  E E+  ADL WEA +G+SA+SSV+    E+D  +D  AY EI DAQS+
Sbjct:    4 GRLSLQVVADFLEHWELHQTLSVLKLETDMATEDLLSTEELGSIVANG----AVVGKGEMKTPEGKTSPVMLQLLAACR--------------------------AAPRDKENEFPLGAAATATATA------GDRSERLIGEHKGWEGEEGRQEAEEEEGEDGGRRSTTWRGVGVEGDGVPPRVTLRKRR-GDHGGTNGTSVCGMGNGS--GGEDANEPASSVSSEPISSATAGVREG-------------------DRQSRERESDGDAEESRFGGLLLRKQP---TAADDKDGGEDNGGGQGRWEHHFDGRMDEDSYDFSENVESVRGGGEDPIVAAAASGVDGDGXXXESISXXXXXXXXXVTTENTAIVEQAGVYDRSYEGEEDDGHRREEGDRFSRHAGANDSPYGGGGGGDGALRNGNGDSLAGFGGSSDNGVGVEKEPRSSVDGGVASGVDEWNEDYYEDDDXXXXXXXXXXXXXXXXXXXXXNSAADVAAKVAANAGDGEVEEEALLT---GGDGTHQDGLFDPEGSRGRVSAEQEERIADLEWEARVGLSADSSVSASPMEEDG-MDGPAY-EIVDAQSI 527          
BLAST of mRNA_C-linearis_contig8.15718.1 vs. uniprot
Match: D7FK22_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK22_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 4.580e-15
Identity = 44/73 (60.27%), Postives = 55/73 (75.34%), Query Frame = 0
Query:   61 GRLSLQLVADFLKHWQLHQTLSILKLETDLAEGDVLPRAELESIVGSDNLATAVAGIGETKSSGGKSAPVLHQ 133
            GRLSLQ+VADFL+HW+LHQTLS+LKLETD+A  D+L   EL SIV +     AV G GE K+  GK++PV+ Q
Sbjct:    4 GRLSLQVVADFLEHWELHQTLSVLKLETDMATEDLLSTEELGSIVANG----AVVGKGEMKTPEGKTSPVMLQ 72          
BLAST of mRNA_C-linearis_contig8.15718.1 vs. uniprot
Match: A0A7S1CMI0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CMI0_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 2.210e-11
Identity = 46/113 (40.71%), Postives = 67/113 (59.29%), Query Frame = 0
Query:    7 LRDVVKKALEGKGVLAQIRASLRAAVFTVVDEHERSSGVHLPNPSALDVKHDAWGRLSLQLVADFLKHWQLHQTLSILKLETDLAEGDVLPRAELESIVGSDNLATAVAGIGE 119
            +++ V + LE  GVL+ IRA LRAAV++ V+E ER++GV+L NP    +     GR+ L LV +FL+ + +  TLS+   E   A+     RA L+S +G   LA   AG GE
Sbjct:   17 VKESVSRILEANGVLSTIRAHLRAAVYSAVEEQERAAGVYLENPLVKTLHESDSGRVMLALVREFLEFYNMEATLSVFLPEAS-ADKVNAERARLQSELG---LAAPAAGEGE 125          
BLAST of mRNA_C-linearis_contig8.15718.1 vs. uniprot
Match: A0A7S2WGI0_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WGI0_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 3.320e-10
Identity = 41/100 (41.00%), Postives = 59/100 (59.00%), Query Frame = 0
Query:    7 LRDVVKKALEGKGVLAQIRASLRAAVFTVVDEHERSSGVHLPNPSALDVKHDAWGRLSLQLVADFLKHWQLHQTLSILKLETDLAEGDVLPRAELESIVG 106
            L+D+V + LE KGVL  IRA LRAAV T +DE ER +GV+L NP     K    G L L L+ ++ + + L +T+S+   E + +  D   R +L S +G
Sbjct:    9 LKDIVARTLEAKGVLGTIRAQLRAAVHTALDEQERVNGVYLENPRLQLAKESEEGLLLLSLINEYFEFYSLDRTVSVFGPEANWSPDDYPGRPQLVSELG 108          
BLAST of mRNA_C-linearis_contig8.15718.1 vs. uniprot
Match: A0A7S2WFJ2_9STRA (Hypothetical protein (Fragment) n=3 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WFJ2_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 5.970e-10
Identity = 41/100 (41.00%), Postives = 59/100 (59.00%), Query Frame = 0
Query:    7 LRDVVKKALEGKGVLAQIRASLRAAVFTVVDEHERSSGVHLPNPSALDVKHDAWGRLSLQLVADFLKHWQLHQTLSILKLETDLAEGDVLPRAELESIVG 106
            L+D+V + LE KGVL  IRA LRAAV T +DE ER +GV+L NP     K    G L L L+ ++ + + L +T+S+   E + +  D   R +L S +G
Sbjct:    9 LKDIVARTLEAKGVLGTIRAQLRAAVHTALDEQERVNGVYLENPRLQLAKESEEGLLLLSLINEYFEFYSLDRTVSVFGPEANWSPDDYPGRPQLVSELG 108          
BLAST of mRNA_C-linearis_contig8.15718.1 vs. uniprot
Match: A0A2R5GRB5_9STRA (FGFR1 onco partner n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GRB5_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 1.400e-9
Identity = 39/100 (39.00%), Postives = 59/100 (59.00%), Query Frame = 0
Query:    7 LRDVVKKALEGKGVLAQIRASLRAAVFTVVDEHERSSGVHLPNPSALDVKHDAWGRLSLQLVADFLKHWQLHQTLSILKLETDLAEGDVLPRAELESIVG 106
            L+ +V + LE KGVL  IRA LRAAVFT +DE ER++GV+L N     +K     +L L L+ +F + ++L +TLS+   E    + +   R +L   +G
Sbjct:   23 LKHIVSRTLEAKGVLGTIRAQLRAAVFTALDEQERANGVYLENYRVQKIKSSPESKLLLALMHEFFEFYELDRTLSVFMPEATWTQAEYPGRQQLSRDLG 122          
BLAST of mRNA_C-linearis_contig8.15718.1 vs. uniprot
Match: A0A6J1RV90_FRAOC (FGFR1 oncogene partner-like n=1 Tax=Frankliniella occidentalis TaxID=133901 RepID=A0A6J1RV90_FRAOC)

HSP 1 Score: 67.0 bits (162), Expect = 3.940e-8
Identity = 48/144 (33.33%), Postives = 72/144 (50.00%), Query Frame = 0
Query:    1 MEEDAALRDVVKKALEGKGVLAQIRASLRAAVFTVVDEHERSSGVHLPNPSALDVKHDAWGRLSLQLVADFLKHWQLHQTLSILKLETDLAEG-DVLPRAELESIVGSDNLATAVAGIGETKSSGGKSAPVLHQLLRAVSHGEG 143
            +EED  LRD+V K LE  GVLA+IRA LRA+VF  ++E E S+     N +  +        L L +V +FL++ +L  +LS+   ET   +G +   R++L   +   NL             GGK  P+L  +L+      G
Sbjct:    3 VEEDTELRDLVSKTLENNGVLAKIRAELRASVFLALEEQE-SNSTPFENKALKEYLKSPQAALGLCIVREFLEYLELDFSLSVYNTETSHGKGYEYSGRSKLIKELQLKNL-------------GGKKGPLLSHILQIAQESNG 132          
BLAST of mRNA_C-linearis_contig8.15718.1 vs. uniprot
Match: A0A812ZNM4_9DINO (Cep43 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812ZNM4_9DINO)

HSP 1 Score: 67.0 bits (162), Expect = 5.750e-8
Identity = 46/130 (35.38%), Postives = 67/130 (51.54%), Query Frame = 0
Query:    7 LRDVVKKALEGKGVLAQIRASLRAAVFTVVDEHERSSGVHLPNPSALDVKHDAWGRLSLQLVADFLKHWQLHQTLSILKLETDL-AEGDVLPRAELESIVGSDN-------LATAVAGIGETKSSGGKSA 128
            ++ +V + LE  GVLA IRA LRAAVFT +DE ER  G+H  N    ++  D  G + L L+ +FL+ + L  T ++L  E         + R+ L+  +G +        LA  V G G + S G  SA
Sbjct:   10 VKGMVAQTLENSGVLASIRAQLRAAVFTAIDEEERKQGIHGANTRFQELADDPAGPVMLSLLREFLEFYNLQHTSNVLASEASSDPTAATMDRSMLQRHLGIEEPSARRPLLAALVEGGGSSVSEGTPSA 139          
BLAST of mRNA_C-linearis_contig8.15718.1 vs. uniprot
Match: A0A6P8Z323_THRPL (FGFR1 oncogene partner-like n=1 Tax=Thrips palmi TaxID=161013 RepID=A0A6P8Z323_THRPL)

HSP 1 Score: 65.9 bits (159), Expect = 1.050e-7
Identity = 38/93 (40.86%), Postives = 54/93 (58.06%), Query Frame = 0
Query:    1 MEEDAALRDVVKKALEGKGVLAQIRASLRAAVFTVVDEHERSSGVHLPNPSALDVKHDAWGRLSLQLVADFLKHWQLHQTLSILKLETDLAEG 93
            +EED  LRD+V K LE  GVLA+IRA LRA+VF  ++E E  +G    N +  +        L L +V +FL++ +L  TLS+   ET   +G
Sbjct:    3 VEEDTELRDLVSKTLENNGVLAKIRAELRASVFLALEEQENKAGP-FENKALKEYLKSPQAALGLCIVREFLEYLELDFTLSVYNTETSHGKG 94          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15718.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JFJ8_9PHAE9.980e-5341.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLY1_ECTSI2.230e-2033.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FK22_ECTSI4.580e-1560.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1CMI0_9STRA2.210e-1140.71Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S2WGI0_9STRA3.320e-1041.00Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A7S2WFJ2_9STRA5.970e-1041.00Hypothetical protein (Fragment) n=3 Tax=labyrinthu... [more]
A0A2R5GRB5_9STRA1.400e-939.00FGFR1 onco partner n=1 Tax=Hondaea fermentalgiana ... [more]
A0A6J1RV90_FRAOC3.940e-833.33FGFR1 oncogene partner-like n=1 Tax=Frankliniella ... [more]
A0A812ZNM4_9DINO5.750e-835.38Cep43 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2... [more]
A0A6P8Z323_THRPL1.050e-740.86FGFR1 oncogene partner-like n=1 Tax=Thrips palmi T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 204..227
NoneNo IPR availablePANTHERPTHR15431:SF9FGFR1 ONCOGENE PARTNERcoord: 2..224
NoneNo IPR availablePANTHERPTHR15431FGFR1 ONCOGENE PARTNER/LISH DOMAIN-CONTAINING PROTEINcoord: 2..224
IPR006594LIS1 homology motifPROSITEPS50896LISHcoord: 60..92
score: 7.714

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig8contigC-linearis_contig8:2873746..2879465 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig8.15718.1mRNA_C-linearis_contig8.15718.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig8 2873737..2881951 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig8.15718.1 ID=prot_C-linearis_contig8.15718.1|Name=mRNA_C-linearis_contig8.15718.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=616bp
MEEDAALRDVVKKALEGKGVLAQIRASLRAAVFTVVDEHERSSGVHLPNP
SALDVKHDAWGRLSLQLVADFLKHWQLHQTLSILKLETDLAEGDVLPRAE
LESIVGSDNLATAVAGIGETKSSGGKSAPVLHQLLRAVSHGEGNGPPPPG
ANGVTGSSSSSNSSSRVTGGGDGHLPGGGAARFSSLSLSFRAGGDLPQRS
AQEHKELEEKGDTEDEQEEEREEEKEMEMGLGAEGNAPSRVTTRKRRAGD
RVGAGSSVDGVDGEATLASSDARSPTPSPSLSPSPAAAAAAEERDGGFAA
AAPSPQPSPPPKCSHQVLLPERDGDAGLVETDPGRYPAASAAAAGEDGNG
ANHHDGSMDESSYHFSEDAVSVEGAAQSPMGVIAAAGMTGWHREAWLRDD
KYVSRAAAAESASNPPRAAGEEEGSPGYRQSGAGVSRDDSGGSRFSGSGG
RGDANTTNGLGDDGGAVRGGGGGGGGVGQNSPCGDAGGAQDEYDWDGDEE
EEEEEEEEGGQRDEEEDEHYEDDDDFHGDDDTDDGVAEALLPTGGGGVGD
KEEGVLFEAQNPGGVDKEAEQAADLGWEAGIGVSAESSVALGLGEDDDVL
DPEAYDEIEDAQSVS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006594LisH