mRNA_C-linearis_contig8.15713.1 (mRNA) Chordaria linearis ClinC8C monoicous
|
Overview
Homology
BLAST of mRNA_C-linearis_contig8.15713.1 vs. uniprot
Match: D8LLY0_ECTSI (WD-40 repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLY0_ECTSI) HSP 1 Score: 2229 bits (5776), Expect = 0.000e+0 Identity = 1388/2459 (56.45%), Postives = 1544/2459 (62.79%), Query Frame = 1
Query: 1 EDGGGWGADGAGPP-SALAYDSEEERMEALAPKTDAEILMEQRKQKAQKIIAKKKPGTTLNPRKRYEQHKEERLHEKQKAAIAXXXXLEAAKEAEETRRMVLEELRSWDAYELNMRNHARMVEQARTSDREAAAERLKQEQEHRLACEEEGLTFDRGVVVSHRRWRASPALATVLPAHPCPAHAMRQSADGRWILSGGDDLTVRLWDTEAFAGKLAGTKNEKKTAKAATRVGAVAADLALGWECARELVGHTSAVRDVEFNPLFDGPPTEPEDGEDEKGGGGEAVPGSEGV-VRLECMLASASADLTVRIWDLSFNPRIARFTLQGHKGVVYACRFAPSGDRLASCSADGTVLMWNVLN-----------------------------------------------------------------------------------------------------EFRESLKIPQTVLNQCDVNPCPNQAVSNGFSLTVTLLNDTGKDTRTEEYYRGCKLVLRARALKKFTGLYVAGVSAEGLWEGFE-VSLFPTTVASKFVLGRETVWVTLRERPPPTPATALFAAKRLKPRKRNFDTVGRTGLFVGALKAGDWTEATMMLSSVAQLQFGKVKTTGAAEVVGEIRKLVGKNIAVLNG-----------LSHRP-----------------------HGSREXXXXXXXXXXXXXXXXXXXXDRXXXXSDGSXGEK--TDRKGRRQRQRRDKRRAKSL-----------------------------------------GSFSPRKGTPKRD--RRWGRGRGKSRA-----------------------------------STTDRSSGGEETAGARALVQKEVRAELAQTKRLKAAGVASWNELGEATGLLSLAKARKRQKARAKGRSKGLLDTAGIKVKDPKVDLKVLVWDGSFGADVKEMRMPLPELYPSSSTPYDQNEDFAARTFGEAIAVGDRAAPALIEEMRAEKKKKVDMVGKTADAVLDRDEQLRRIGIRRRDAIGSPSDLAAAFPAPDARLIPLPRRALENGGNND--------EGGAAXXXXXXXXXXXAVNTELVLLKGRGGDAAEKSTTSRDLVGYNPQERRTMSATVHESEKYQERGEKENKEAEE-----ERALASPLADSLIDGHTVTGSATTATTAALPPLEASIMHAKLEGTASREKRQKLEKRLAKKAPPVDPPEDVDLARRRGGLGTLPGGAPLVEVPAVGDWEKQMARENGGLLRQMETKFGGLICHQDAVNAVSYSPDGRRLASASSDGTIKLWDPACATLVRLLTGHHEGLAVWDVAWSGDSMFLVSCGADRSLVIWNTAATEPFVRRFLGHSDHVTRCAFADTKGQAVLSCGSDGTIRKWVLTPNVPAPPPKPFVTHKTRIWVMLNWRPAAGSNEEVTAYVVSWRLGRKGNFDDELTVAGDQLRRDVTGLLPGSVYFFRVAGVNRMGQGPWSEMTDMVDTEMDLPLAMDRPDTEAATPGSVTISFFAPRPTLPKMKIQRFVLQVKGGGLDFDDGESQEYTWDEAMAGAAVLRGKERKHAKAQKESIVSISRSRSVASTMSTGATTGTGGAAPGGNVGSTESGGVGAVRLGSIANAAP--GEAQGKGLTAXXXXXXXXXXXXXXXXXXXXKANFETGL-----------------------------------------------------------------EKTETGAAVAAADRTAMMPAXXXXXXXXXXXXXXXXXXXXXXXXXXXAS------------AADNTGGA--TAGGYIGNNIHTTAGQAGGIVVGKGGGSVQGGQVHLVRHGSFARSKTRLGRVDHKLRRSQRHRRKAHHYLMSLTHSGLQPGIDYHIRVAGISSVGQGAFSMPTYSVRTPAVRPHACPTPTVSTAFLTAIMISWAEGDDGGSSVTGFTVRPTGGGEAEEVFVSRTKRSYLFENLEKGHTYSFQVRAANNEGIGPWSEPSQPARTLTQRPDAPQAPAIAVACSPPGPLSLWLSIFLPDEDGGDSIIAMLLETRRHGGTQPPEWSRCKRHPVPPTLAANAADEGAPSGSTRMTATGGSGTGG----RXXXXXXXXXXHRQVGXXXXXXXXXXP-SSRPGSACCEIVVLVEGLTPRTYYSFRASAVNARGAGDPGPPCRRVRTAAPSPPSWAVGNNSVKPPPPGEKTGQVSGGKTESEGPGGGGVTTAGTHLTCAPPRAACSGLGACTVLWGEPFSNGAVIELYEVEVVRIRSEVMAKGVGTTAKHKEGKDAVHDDDINGNSGHESNPTKGCIGDLTGEERQPGGLG------------LVSPSMPEIKQNEEATGEAAXXXXXXXXXEVVSLPVPEREGRGGGEEGGRGEVVREVKQRFTRSVPSHMRHLVVRGLATGGDYVFRVSASNVAGMGETGPWTQVVRVVDPADE 6390
E+ GGWG GAGPP SALAYDSEEERM+ALAPKTDAEILME+RK KAQK++A KKPGTTLNPRKRYEQ +EERL+E+Q XXX LE AKE EE +RM+LEELRSWDAYELN RNH RM+EQ R DR AAA +LK+ +E RLACEEEGLTF+ GVVV HRRWRAS ALATVLPAHPCP HAMRQS++GRWILSGGDDLTVRLWDTEAFA KL+ KNEK+ AKAA R GAVAADLALGWECARELVGHT+AVRDVEFNPLF GPP + ED ++E GE PGSEG VRL C+LASAS DLTVRIWDLSFNPR+ARF L+GHKGVV ACRFAPSGDRLASCSADGT+ +WNVLN E+RE LKIP+TVL QCD +PCP QAVSNGFSLTVT+LND+GKDTRTEEYYRGCKLVLRARALKKFTGLYVAGVSAEGLWEGFE + FPT VASK VLGRETVWVTLRERPPPTP A+FAA RLKPRKR FDTV RTG+F ALKAGDW EATMMLS A+LQF KVK TGA EV EIRK++G+NIAV N +SH P G ++ + S GS G T G R ++ S G + R G RD G GR K R S TD SS EET R V+KEVRAELA RL+AAGVASW ELG A GLLSLAKARKR K RAKG+SKGLLD AGI VKDPKVDLKVLVWDG FGADVKEMRM LPELYPS+STPYDQNEDFAART GEAIAVGDRAAPALIEEMRAEKKKKVD GK +AVL+RD+QLRR+G RRR+A+ SPSDLAA+FPAPD R+ PL ++NG N D EG + LL GGDA D P+ EN + E+ ER SPLA++ D ++ A T LPPLE S+ HAKLEGTASREKR K EKRLAK+APP DPP DVDLARRRGGL ++ET+FGGLICHQD +N VSYSPDGRRLA+ASSDGTIKLWDP+ VR+LTGHHEGL VWDVAWSGDSMFLVSC ADRSLVIWNTAA EPFVRRFLGHSDHV RCAFADT+GQAVLSCGSDGT+RKWVLTPNVPAPPPKPFVTHKTR WVMLNWRPAAGSNE+VTAYVVSWRLGRKG FDDELTVAGDQLRRDVTGLLPGS+YFFRVAGVNRMGQGPWSE TDMVDTEMDLPLAM+RP+ EA TP S+ ISFFAPRPTLPKMKIQ FVLQ KGGGLDFD+ ++QE+TW EAMAGAA LRGKER HA Q++SIVSISRSRSV S +TG + GS+ESG VG++++GS AN G G+G+ XXXXXXXXXXXXXXXXX G AA+ + M S AAD T GA TA TTAG + G+G S Q GQ VR +FAR TR+GRVDHKLRR QR RRKAHHYLMSLT++GLQPG+DYHIRVAGISSVGQGAFS+PT+S RTP+VRPHACP PT S+ FLTAIMISWAEGDDGGSS+TGF +RP GGG+AEE+ V R KRSYL E L KGHTY FQVRAANNEGIGPWSEPSQP RTLT+RP P+APA++++ PPGPLSLWLS+FLPDEDGGD + AMLLETRRHGGTQPPEWSRC+RHPVP T+ G+ ST TG G G R+ G P S+R CCEIVVLVEGL PRTYYSFRASAVNARGA DPGPPCRR RT+AP PPSW + + V T + T S GG+ AG C PPRAA SGLGACTV W EPFSNGA +E Y+VEVV + EV VG G+D +D ++ P K G +G+ ++ G+G VS M + K +E + XXXXXXXXX VV LP P+ GR GG VVREVK+RF R VPSH+RHLV+RGLATGGDYVFRVSASN AGMGE+GPWT+VVRVVDPADE
Sbjct: 30 EERGGWGT-GAGPPNSALAYDSEEERMKALAPKTDAEILMEERKLKAQKMLA-KKPGTTLNPRKRYEQRQEERLYERQXXXXXXXXSLEVAKETEENKRMLLEELRSWDAYELNTRNHNRMIEQER-EDRAAAANKLKESEERRLACEEEGLTFNHGVVVCHRRWRASSALATVLPAHPCPVHAMRQSSNGRWILSGGDDLTVRLWDTEAFARKLSDPKNEKRAAKAAARAGAVAADLALGWECARELVGHTAAVRDVEFNPLFGGPPEDQEDAQEE----GEGGPGSEGAPVRLACVLASASTDLTVRIWDLSFNPRVARFALKGHKGVVSACRFAPSGDRLASCSADGTIRLWNVLNGTNVFCYEXXXXXXXXXXXXXXXXXXXXXXDIGERAIRVWFADMPLYDRDPVQFGLRLRWTRSGLIKRVRANTESSAMGFFLSRQEDRESRESSDESEGEKEYRELLKIPKTVLTQCDASPCPTQAVSNGFSLTVTILNDSGKDTRTEEYYRGCKLVLRARALKKFTGLYVAGVSAEGLWEGFEAIFRFPTIVASKSVLGRETVWVTLRERPPPTPPAAIFAATRLKPRKRLFDTVARTGVFAKALKAGDWAEATMMLSVAAKLQFSKVKATGATEVADEIRKVLGRNIAVHNARSVGVAWTSVCVSHEPPDXXXXXXXXXXXXXXXXXXXXXXGGKKHPNSKAAPGTTAVSGKGTTPEVTSPGSPGSVGTAAATVVTGARAGATGKEKSKPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRKTGRLGGEDRDTGESGGSGREKGRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSATDPSSCDEETTAIRDSVEKEVRAELANLNRLRAAGVASWKELGHAMGLLSLAKARKRDKVRAKGQSKGLLDAAGITVKDPKVDLKVLVWDGFFGADVKEMRMQLPELYPSTSTPYDQNEDFAARTLGEAIAVGDRAAPALIEEMRAEKKKKVDPAGKMVNAVLERDQQLRRVGTRRREAMISPSDLAASFPAPDPRMAPLRHYPVDNGENKDTKEANHQEEGDEGTEKLPESTSTRSKEAPPQLLPENGGDAWSGKAGDDDNKNEGPRGGTDAXXXXXXXXXXXXXXXXENLDEEQDQGDLERVPLSPLAETRGDD-----TSAAAITTNLPPLEPSVFHAKLEGTASREKRLKREKRLAKQAPPDDPPGDVDLARRRGGL-------------------------------ELETRFGGLICHQDTINVVSYSPDGRRLATASSDGTIKLWDPSSGKQVRVLTGHHEGLPVWDVAWSGDSMFLVSCAADRSLVIWNTAAAEPFVRRFLGHSDHVKRCAFADTRGQAVLSCGSDGTVRKWVLTPNVPAPPPKPFVTHKTRTWVMLNWRPAAGSNEQVTAYVVSWRLGRKGKFDDELTVAGDQLRRDVTGLLPGSLYFFRVAGVNRMGQGPWSEATDMVDTEMDLPLAMERPNVEAVTPYSIAISFFAPRPTLPKMKIQTFVLQAKGGGLDFDESDTQEFTWKEAMAGAAALRGKERMHAITQRQSIVSISRSRSVTSMATTG------------DRGSSESGRVGSIQIGSFANTTEVAGCVDGEGIAETISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGSSATFGMVPVAAEGSQDMGGDGGAGGMLAGGDGSDDRQRGSVAIVKHGSFAKGNIAETQPAAADGTQGAEGTA------QARTTAGGPERMASGEGDESGQSGQAPFVRLSNFARRNTRIGRVDHKLRRHQRRRRKAHHYLMSLTYTGLQPGMDYHIRVAGISSVGQGAFSVPTFSARTPSVRPHACPPPTASSIFLTAIMISWAEGDDGGSSITGFFLRPVGGGQAEEISVPRIKRSYLIEGLLKGHTYRFQVRAANNEGIGPWSEPSQPVRTLTERPSPPRAPALSISHPPPGPLSLWLSLFLPDEDGGDPVTAMLLETRRHGGTQPPEWSRCERHPVPSTID-KGNQHGSSPASTSAAPTGRDGGDGGDRSSGDGKAGGILEPRRAGRGGLGDTGGIPGSTREARKCCEIVVLVEGLQPRTYYSFRASAVNARGASDPGPPCRRARTSAPRPPSWVLAQDIVNTTAVAAPTAPAT---TPSPTKSVGGI--AGVAFRCLPPRAASSGLGACTVRWEEPFSNGAAVEQYQVEVVSLGPEVEGNNVGGGG----GRDEQVEDADKFSANTPEAPLKEEEG-ASGDAKKGNGIGRDDQQDGPCNQPTVSAVMHKAKTDEPSETXXXXXXXXXXXXXVVVLPAPQLPGREGGT------VVREVKERFPRPVPSHLRHLVIRGLATGGDYVFRVSASNAAGMGESGPWTEVVRVVDPADE 2410
BLAST of mRNA_C-linearis_contig8.15713.1 vs. uniprot
Match: A0A836CAF5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAF5_9STRA) HSP 1 Score: 137 bits (345), Expect = 2.280e-28 Identity = 72/182 (39.56%), Postives = 109/182 (59.89%), Query Frame = 1
Query: 3463 VLSCGSDGTIRKWVLTPNVPAPPPKPFVTHKTRIWVMLNWRPAAGSNEEVTAYVVSWRL-GRKGNFDD--ELTVAGDQLRRDVTGLLPGSVYFFRVAGVNRMGQGPWSEMTDMVDTEMDLPLAMDRPDTEAATPGSVTISFFAPRPTLPKMKIQRFVLQVKGGGLDFDDGESQEYTWDEAMA 3999
++SCG +G +R W L+P+VP+ P +P+VT + L W P A +TA+++ R G G D E+T GD RR++ LLPG+V+ FR+A VN +G+G WSE ++ V T++ +P ++RP T +VT++F AP PTLP+M+I F+L+ G G TWDEA+A
Sbjct: 1380 LVSCGGEGEVRLWDLSPDVPSKPSRPWVTFAGADSITLVWHPPAAGAAALTAHIIGIRAAGAAGAHDTTHEVTAPGDATRREIPALLPGTVHTFRIAAVNHVGRGEWSEESEAVATDVVVPPPVERPRAAHVTANAVTVTFLAPAPTLPQMQIHAFILRAVGHG-----DIKLSITWDEALA 1556
BLAST of mRNA_C-linearis_contig8.15713.1 vs. uniprot
Match: A0A8J2SIV4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SIV4_9STRA) HSP 1 Score: 101 bits (251), Expect = 2.070e-17 Identity = 91/315 (28.89%), Postives = 126/315 (40.00%), Query Frame = 1
Query: 4705 LMSLTHSGLQPGIDYHIRVAGISSVGQGAFSMPTYSVRTPAVRPHACPTPTVSTAFLTAIMISWAEGDDGGSSVTGFTVRPTGGGEAEEVFVSRTKRSYLFENLEKGHTYSFQVRAANNEGIGPWSEPSQPARTLTQRPDAPQAPAIAVACSPPGPLSLWLSIFLPDEDGGDSIIAMLLETRRH---GGTQPPEWSRCKRHPVPPTLAANAADEGAPSGSTRMTATGGSGTGGRXXXXXXXXXXHRQVGXXXXXXXXXXPSSRPGSACCEIVVLVEGLTPRTYYSFRASAVNARGAGDPGPPCRRVRTAAPSPPS 5640
LM+ L+PG DY RV+ ISSVG+G FS+PTY+ +TP P P V TA+ + W + GS++ F +R + +R +F+ LE G YSFQ+ A N G WS S+P TLT P P+ P + A ++ L P G II+ ++ RR GG + EW+ R P P GG+G AC + + L P T Y FR +A+NA G D P R+RT PP+
Sbjct: 1356 LMAAAFDELKPGFDYRCRVSAISSVGEGPFSLPTYNAKTPPDYPANPRCPVVKALSQTALKLKWVAPLENGSAIMRFLIRRKDVTNDVSEY-TRHDSEAVFDCLEPGKKYSFQICAFNQIGPSTWSPWSEPTSTLTALPKVPERPTVLEATI----TAVTLRCVKPHNSG--KIISTIVVQRRELRPGGVKS-EWASKTRFPPNP---------------------GGTGV-----------------------------------AC---IFTISPLEPYTVYQFRCAAINAHGQSDWSLPSFRIRTCKAQPPA 1603
BLAST of mRNA_C-linearis_contig8.15713.1 vs. uniprot
Match: A0A7S0DRY6_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DRY6_9EUKA) HSP 1 Score: 86.7 bits (213), Expect = 3.520e-14 Identity = 47/132 (35.61%), Postives = 70/132 (53.03%), Query Frame = 1
Query: 3136 GGLIC------HQDAVNAVSYSPDGRRLASASSDGTIKLWDP-ACATLVRLLTGHHEGLAVWDVAWSGDSMFLVSCGADRSLVIWNTAATEPFVRRFLGHSDHVTRCAFADTKGQAVLSCGSDGTIRKWVLT 3510
GG C H ++++ +SPDG+ LASAS DGTI+LW+P L+++L G H + D++W+ S L S G D ++V+W+ P R +GHS HV F+ ++S D IR W T
Sbjct: 13 GGFRCINKLKGHDKVISSLKFSPDGKYLASASGDGTIRLWNPFEGKNLIKILDGAHTS-GINDISWNDQSRLLCSAGDDNNIVVWDIQKGVP-ARTLVGHSKHVFCVKFSRNPSNKIVSGDYDCEIRIWSST 142
BLAST of mRNA_C-linearis_contig8.15713.1 vs. uniprot
Match: E1Z846_CHLVA (Uncharacterized protein (Fragment) n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z846_CHLVA) HSP 1 Score: 73.6 bits (179), Expect = 3.640e-10 Identity = 42/112 (37.50%), Postives = 61/112 (54.46%), Query Frame = 1
Query: 3172 VSYSPDGRRLASASSDGTIKLWDPACATLVRLLTGHHEGLAVWDVAWSGDSMFLVSCGADRSLVIWNTAATEPFVRRFLGHSDHVTRCAFADTKG--QAVLSCGSDGTIRKW 3501
V+++ DGR LA+AS D T+++WD A VRLL GH + A+S S LVS G D +++W+ P ++ GHSD V+ F+ G + + SC DG R W
Sbjct: 2 VAWTHDGRYLATASDDKTLRVWDAATGGTVRLLLGHTHYVVC--CAFSAGSNLLVSGGFDEVVIVWDVVNCRP-IKFIPGHSDPVSGVHFSGEPGLNELIASCSFDGLTRVW 110
BLAST of mRNA_C-linearis_contig8.15713.1 vs. uniprot
Match: A0A1I7CHX0_9MICC (WD domain-containing protein, G-beta repeat-containing protein n=1 Tax=Arthrobacter sp. ov118 TaxID=1761747 RepID=A0A1I7CHX0_9MICC) HSP 1 Score: 70.9 bits (172), Expect = 2.400e-9 Identity = 34/76 (44.74%), Postives = 52/76 (68.42%), Query Frame = 1
Query: 3151 HQDAVNAVSYSPDGRRLASASSDGTIKLWDPACATLVRLLTGHHEGLAVWDVAWSGDSMFLVSCGADRSLVIWNTA 3378
H DAVN++++ PDG +ASAS+DGT+++W+PA V LTGH V+ VA+S D L S G+D ++++W+ A
Sbjct: 40 HLDAVNSIAFGPDGS-IASASADGTVRIWNPASGRSVGPLTGHQG--PVYGVAFSPDGRVLASGGSDNNVLLWDAA 112
BLAST of mRNA_C-linearis_contig8.15713.1 vs. uniprot
Match: A0A4R9A099_9MICO (Alpha-amylase n=2 Tax=Cryobacterium sp. Hh14 TaxID=1259150 RepID=A0A4R9A099_9MICO) HSP 1 Score: 74.7 bits (182), Expect = 2.650e-9 Identity = 57/179 (31.84%), Postives = 83/179 (46.37%), Query Frame = 1
Query: 4693 AHHYLMSLTHSGLQPGIDYHIRVAGISSVGQGAFSMPTYSVRTPAVRPHACPTPTVSTAFLTAIMISWAEG-DDGGSSVTGFTVRPTGGGEAEEVFVSRTKRSYLFENLEKGHTYSFQVRAANNEGIGPWSEPSQPARTLTQRPDAPQAPAIAVACSPPGPLSLWLSIFLPDEDGGDSI 5226
AH+Y + T +GL + V + A S + + T A +P A +P+++ T ++WA DDGG+SVTG+TV T G E V R + F LE Y+ V +N G G S S PART P AP AP ++ A S ++ ++ P + GG I
Sbjct: 2248 AHNYTTTHTFTGLPRATAFTATVTATNYAELSATSAASAPMSTLAEKPGAPASPSITVEGSTTATVTWAAATDDGGASVTGYTVTLTAGDEIRTQSVLGDAREFAFTGLEPNTQYTATVAVSNTMGRGEASVSSAPARTPIGSPSAPAAPVLSDATS----TAVTVTWSAPADTGGSEI 2422
BLAST of mRNA_C-linearis_contig8.15713.1 vs. uniprot
Match: UPI0015E35DCC (caspase family protein n=1 Tax=unclassified Mesorhizobium TaxID=325217 RepID=UPI0015E35DCC) HSP 1 Score: 73.6 bits (179), Expect = 5.620e-9 Identity = 50/164 (30.49%), Postives = 85/164 (51.83%), Query Frame = 1
Query: 3037 GGAPLVEVPAVGDWEKQMARENGGLLRQMETKFGGLI----CHQDAVNAVSYSPDGRRLASASSDGTIKLWDPACATLVRLLTGHHEGLAVWDVAWSGDSMFLVSCGADRSLVIWNTAATEPFVRRFLGHSDH-VTRCAFADTK-GQAVLSCGSDGTIRKWVLT 3510
GG+ L A+ D + ++ G+++ + GGL+ H + + + P+ LASAS DGT++LW A L+R + ++W +A S D LV+ + +L+I+N + T +R GHS V + A TK G++V+S G+D ++ W LT
Sbjct: 116 GGSVLFIATALND-SVIVTGDDRGIIKVWDLPSGGLLRTINAHAEELAGLVVLPNTTELASASRDGTLRLWQLATGQLIREYGSKDDHYSIWSMALSQDGRELVAGTGEGTLLIYNVS-TGAKIRSRPGHSGGPVLKAAIIRTKSGESVMSTGNDSSVEFWDLT 277
BLAST of mRNA_C-linearis_contig8.15713.1 vs. uniprot
Match: A0A7S1FMW9_9STRA (Hypothetical protein n=3 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FMW9_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 7.120e-9 Identity = 49/138 (35.51%), Postives = 72/138 (52.17%), Query Frame = 1
Query: 3094 RENGGLLRQMETKFGGLICHQDAVNAVSYSPDGRRLASASSDGTIKLWDP-ACATLVRLLTGHHEGLAVWDVAWSGDSMFLVSCGADRSLVIWNTAATEPFVRRFLGHSDHVTR-CAFADTKGQAVLSCGSDGTIRKW 3501
R +GG L + G H ++ A+SYSP G LASAS D ++ LW P T +L+ +H+ AV DV W+ DS L++ GAD +L ++ A + +RR +GH V CA + +S DG +R W
Sbjct: 43 RPSGGGLAEPTLLLTG---HTGSIYALSYSPSGHALASASFDCSVLLWSPYGYCTNYAVLSPNHKN-AVLDVRWTFDSSHLITAGADAALGYYD-ALSGRRLRRLMGHDGIVNSVCAPRGASAISFISGSDDGYMRVW 175
BLAST of mRNA_C-linearis_contig8.15713.1 vs. uniprot
Match: A0A2G8RP49_9APHY (Transporter n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8RP49_9APHY) HSP 1 Score: 72.0 bits (175), Expect = 1.140e-8 Identity = 42/118 (35.59%), Postives = 64/118 (54.24%), Query Frame = 1
Query: 3151 HQDAVNAVSYSPDGRRLASASSDGTIKLWDPACATLVRLLTGHHEGLAVWDVAWSGDSMFLVSCGA-DRSLVIWNTAATEPFVRRFLGHSDHVTRCAFADTKGQAVLSCGSDGTIRKW 3501
H+ V ++ S DGRR+ +AS+DGTI +W+P T + H G+ +A S DS LVS G D +L +W+ + GH++ VT CA++ G + S +DGT+R W
Sbjct: 409 HEATVKCLTASLDGRRVVTASNDGTIIVWNPEGGTASQEWFAHRRGVRA--LALSPDSQRLVSTGGRDDTLTVWDVSNGVRQAGVIEGHTESVTSCAWSPN-GALIGSASADGTVRVW 523 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15713.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig8.15713.1 >prot_C-linearis_contig8.15713.1 ID=prot_C-linearis_contig8.15713.1|Name=mRNA_C-linearis_contig8.15713.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=2134bp EDGGGWGADGAGPPSALAYDSEEERMEALAPKTDAEILMEQRKQKAQKIIback to top mRNA from alignment at C-linearis_contig8:2827249..2845891- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig8.15713.1 ID=mRNA_C-linearis_contig8.15713.1|Name=mRNA_C-linearis_contig8.15713.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=18643bp|location=Sequence derived from alignment at C-linearis_contig8:2827249..2845891- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig8:2827249..2845891- >mRNA_C-linearis_contig8.15713.1 ID=mRNA_C-linearis_contig8.15713.1|Name=mRNA_C-linearis_contig8.15713.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=12804bp|location=Sequence derived from alignment at C-linearis_contig8:2827249..2845891- (Chordaria linearis ClinC8C monoicous)back to top |