mRNA_C-linearis_contig8.15622.1 (mRNA) Chordaria linearis ClinC8C monoicous
|
Overview
Homology
BLAST of mRNA_C-linearis_contig8.15622.1 vs. uniprot
Match: D7G568_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G568_ECTSI) HSP 1 Score: 634 bits (1634), Expect = 1.410e-221 Identity = 298/399 (74.69%), Postives = 337/399 (84.46%), Query Frame = 2
Query: 29 MLARAILGVVLFTCGLAAGAENQ---AAVRGAGDRXXXXXXXXXAPHEREGARRLASAQD-LNLSDAEEQIIGTPWNYQQRFDPKLFARSSEWAPNLYALPDGVCDVNDNHKQLIDQIDVWGGAAKTKPRLLCGIYTHEKNHNTKVKAIKETWASRCDGFVAFSDKVDLNVPSFKIKHEGPEEWNNMWQKSRAIWKYIDRHYKNDFDWFVLGGDDIFLIVENLRKYLLSAEIKKAAGGFQNGGTNPMYLGRRFRPKGNDERIFNSGGAAYVLNQASLGLLASQLDTPACHAHQECSWEDVNVAACLRQQGVVAFDTRDALGRERFHPFTPGQHLSYQIPRQNPEKDWYIEYSIDLKTGRECCSRNSLSFHYVDEKLMRRLYHLLYSCPKAPVKLERVDL 1213
M+ R +LG + +C A ++ AA GAGD P EREGARRL + Q+ L LSDAEEQ+IG PWNYQQ+FDP F RSS+WAP LYALP+GVCD+ND+HKQLI Q+DVWGGAAKT PR+ CG+YT+ NH+TK+KAIKETWASRCDGFVAFSD+VDL VPSFKIKHEGPEEW+NMWQKSRAIWKYIDRHY NDFDWFVLGGDDIFLIVENLRKYLLS +IKKAAGGF++GG+ PMYLGRRFRPKGN++RIFNSGGAAY+LNQ S+ LLAS LD P+CH HQ+CSWEDVNVAACLRQ GVVA DTRD LGRERFHPFTPGQHL Y++P+ NPEKDWY++YSIDLK GRECCSR SLSFHYVDE LMRRLYHL+YSCPKAPV L VD+
Sbjct: 1 MVLRVLLGALAISCVFAVQEDSGNEVAAAGGAGDADA-------VPPEREGARRLMTLQESLGLSDAEEQMIGKPWNYQQKFDPNHFFRSSQWAPTLYALPEGVCDLNDSHKQLIAQVDVWGGAAKTAPRIFCGVYTYHANHDTKIKAIKETWASRCDGFVAFSDQVDLAVPSFKIKHEGPEEWDNMWQKSRAIWKYIDRHYINDFDWFVLGGDDIFLIVENLRKYLLSDDIKKAAGGFKDGGSVPMYLGRRFRPKGNNDRIFNSGGAAYLLNQKSVRLLASHLDDPSCHPHQQCSWEDVNVAACLRQHGVVAHDTRDGLGRERFHPFTPGQHLMYRVPKTNPEKDWYVDYSIDLKIGRECCSRYSLSFHYVDENLMRRLYHLVYSCPKAPVDLPHVDM 392
BLAST of mRNA_C-linearis_contig8.15622.1 vs. uniprot
Match: D7FTE6_ECTSI (WSC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTE6_ECTSI) HSP 1 Score: 445 bits (1145), Expect = 3.630e-146 Identity = 208/336 (61.90%), Postives = 255/336 (75.89%), Query Frame = 2
Query: 218 EEQIIGTPWNYQQRFDPKLFARSSEWAPNLYA--LPDGV-CDVNDNHKQLIDQIDVWGGAAKTKPRLLCGIYTHEKNHNTKVKAIKETWASRCDGFVAFSDKVDLNVPSFKIKHEGPEEWNNMWQKSRAIWKYIDRHYKNDFDWFVLGGDDIFLIVENLRKYLLSAEIKKAAGGFQNGGTNPMYLGRRFRPKGNDERIFNSGGAAYVLNQASLGLLASQLDTPACHAHQECSWEDVNVAACLRQQGVVAFDTRDALGRERFHPFTPGQHLSYQIPRQNPEKD--------WYIEYSIDLKTGRECCSRNSLSFHYVDEKLMRRLYHLLYSCPKAPV 1192
++QIIG PW++Q++FDP F S + ++ + +G CDV D+HK+L+DQ VW GA KT PR+ CGIYTH+ NH TKVKAIKETWAS CDGFVAFSD DL + +F IKHEGPEE+ NMWQKSRAIWKYI+ HYK+DFDWFVLGGDD+F+IVENLRKYLLS E+K+AAGG +NGGT P+YLGRR R G+D RI+N+GGA+YVLNQAS+GLLA LD C H + WEDV + +CL++ GV FDTRD LGRERFHPFTPG H Y+ P + + WY+ +IDLK GRECCS +S+SFHYVDE+LMRRL+ LLY CP+ V
Sbjct: 160 DKQIIGQPWDFQEKFDPVNFFFSDRGDSSSFSNHVRNGSSCDVEDDHKKLLDQTHVWQGARKTTPRVFCGIYTHQNNHATKVKAIKETWASHCDGFVAFSDAADLELQTFMIKHEGPEEYTNMWQKSRAIWKYINFHYKDDFDWFVLGGDDLFIIVENLRKYLLSEEVKRAAGGLENGGTTPVYLGRRLRGFGDDNRIYNNGGASYVLNQASVGLLADHLDDDDCQPHTKKPWEDVLIGSCLKKNGVEPFDTRDNLGRERFHPFTPGAHFGYRKPPKLENRHVPGCKVGAWYLIQAIDLKFGRECCSDDSISFHYVDEQLMRRLHDLLYLCPEDEV 495
BLAST of mRNA_C-linearis_contig8.15622.1 vs. uniprot
Match: A0A6H5JMC5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMC5_9PHAE) HSP 1 Score: 435 bits (1118), Expect = 3.320e-143 Identity = 205/338 (60.65%), Postives = 253/338 (74.85%), Query Frame = 2
Query: 206 LSDAEEQIIGTPWNYQQRFDPKLFARSSEWA-PNLYALPDG-VCDVNDNHKQLIDQIDVWGGAAKTKPRLLCGIYTHEKNHNTKVKAIKETWASRCDGFVAFSDKVDLNVPSFKIKHEGPEEWNNMWQKSRAIWKYIDRHYKNDFDWFVLGGDDIFLIVENLRKYLLSAEIKKAAGGFQNGGTNPMYLGRRFRPKGNDERIFNSGGAAYVLNQASLGLLASQLDTPACHAHQECSWEDVNVAACLRQQGVVAFDTRDALGRERFHPFTPGQHLSYQIPRQNPEK--------DWYIEYSIDLKTGRECCSRNSLSFHYVDEKLMRRLYHLLYSCPKAP 1189
L+ E + WN Q +FD + F ++ + P+L C ND+HK+++ +DVW GA+KT PR+ CGI+TH+KNH TKVKAIKETWA+ CDGFVAFSD D ++ +F+I+HEGPEE++NMWQKSRAIWKYI+ HYKNDFDWF+LGGDD+F+IVENLRKYLLS +I +AAGG NGG NPMYLGRR RP +DE IFNSGGA+YVLNQAS+ LLAS LD AC H++ SWEDV VA CL++ GVVAFDTRD GRERFHP+TP H Y++P + ++ DWYI +IDL G E CS +SLSFHYVDE LMRRLYHL+YSC + P
Sbjct: 79 LTSKEHKRFTASWNDQDKFDTRKFLLPTQHSTPSLSGNSSSKACGTNDDHKEMLSHVDVWEGASKTMPRIFCGIFTHKKNHFTKVKAIKETWAANCDGFVAFSDAADPDLHTFQIEHEGPEEYDNMWQKSRAIWKYINFHYKNDFDWFLLGGDDLFVIVENLRKYLLSDDIMRAAGGRINGGPNPMYLGRRLRPFNDDEWIFNSGGASYVLNQASVRLLASYLDEDACQPHKKTSWEDVMVAMCLKKNGVVAFDTRDESGRERFHPYTPAVHFGYRMPMRPEDRFVSGIVVGDWYISMAIDLVFGLEGCSSDSLSFHYVDEDLMRRLYHLVYSCDRDP 416
BLAST of mRNA_C-linearis_contig8.15622.1 vs. uniprot
Match: D7FK28_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK28_ECTSI) HSP 1 Score: 437 bits (1123), Expect = 5.750e-143 Identity = 214/371 (57.68%), Postives = 263/371 (70.89%), Query Frame = 2
Query: 206 LSDAEEQIIGTPWNYQQRFDPKLFARSSEWAPNLYALPDGV--CDVNDNHKQLIDQIDVWGGAAKTKPRLLCGIYTHEKNHNTKVKAIKETWASRCDGFVAFSDKVDLNVPSFKIKHEGPEEWNNMWQKSRAIWKYIDRHYKNDFDWFVLGGDDIFLIVENLRKYLLSAEIKKAAGGFQNGGTNPMYLGRRFRPKGNDERIFNSGGAAYVLNQASLGLLASQLDTPACHAHQECSWEDVNVAACLRQQGVVAFDTRDALGRERFHPFTPGQHLSYQIPRQNPEK--------DWYIEYSIDLKTGRECCSRNSLSFHYVDEKLMRRLYHLLYSCPKAPVKLERVDLLSAPKA*HDT*HNGMIDTTAGGRND 1288
L+ E + T WN Q +FD K ++++ + + C +ND+HK+++ +DVW GA+KT PR+ CGI+TH KNH TKVKAIKETWA CDGFVAFSD D ++ +F+I+HEGPEE+ NMWQKSRAIWKYI+ HYKNDFDWF+LGGDD+F+IVENLRKYLLS EI AAGG NGG NPMYLGRR RP +DE IFNSGGA+YVLNQAS+GLLAS LD AC H++ SWEDV VA CL++ GVVAFDTRDA GRERFHP+TP H Y+ P + ++ DWYI +IDL G E CS +SLSFHYVDE LMRRLYHL+YSC K P ++ AP H + + AGG+ +
Sbjct: 131 LTSIEHKRSTTSWNDQDKFDTKKIFLPTQYSTSSLSGDSSARACAMNDDHKKMLTHVDVWEGASKTMPRIFCGIFTHRKNHFTKVKAIKETWAVNCDGFVAFSDAADPDLHTFQIEHEGPEEYGNMWQKSRAIWKYINFHYKNDFDWFLLGGDDLFVIVENLRKYLLSDEIMHAAGGGINGGPNPMYLGRRLRPFNDDEWIFNSGGASYVLNQASVGLLASYLDEDACQPHKKTSWEDVMVAMCLKKNGVVAFDTRDASGRERFHPYTPAVHFGYRTPMRPEDRLVSGIVVGDWYIGMAIDLIFGLEGCSSDSLSFHYVDEDLMRRLYHLVYSCGKDPADA----VVQAP-------HLQLQQSRAGGQEE 490
BLAST of mRNA_C-linearis_contig8.15622.1 vs. uniprot
Match: D7FK31_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK31_ECTSI) HSP 1 Score: 432 bits (1111), Expect = 3.490e-142 Identity = 202/338 (59.76%), Postives = 249/338 (73.67%), Query Frame = 2
Query: 209 SDAEEQIIGTPWNYQQRFDPKLF-----ARSSEWAPNLYALPDGVCDVNDNHKQLIDQIDVWGGAAKTKPRLLCGIYTHEKNHNTKVKAIKETWASRCDGFVAFSDKVDLNVPSFKIKHEGPEEWNNMWQKSRAIWKYIDRHYKNDFDWFVLGGDDIFLIVENLRKYLLSAEIKKAAGGFQNGGTNPMYLGRRFRPKGNDERIFNSGGAAYVLNQASLGLLASQLDTPACHAHQECSWEDVNVAACLRQQGVVAFDTRDALGRERFHPFTPGQHLSYQIPRQNPEK--------DWYIEYSIDLKTGRECCSRNSLSFHYVDEKLMRRLYHLLYSCPK 1183
S + Q IG PW+YQ++FD F A S W P CD+ND+HK+L+ Q+DVW A PR+ CGIYTH+ NH TKV AIKETWA CDGFVAFSD D + SFKIKHEGPEE++NMWQKSRAIWKYI+ HYK+DFDWFVLGGDD+FLI+ENLRKYLLS EI +AAGG QNGGTNPM+LGRR + G RI+N+GGA+YV+NQAS+GLL + LD C H + SWEDV V+ CL+ GV+AFDTRD LGRERFHPF+P H+ Y++P ++ WY +I+L+ G ECCS++S+SFHY+DE+LMRRLYHL+YSCP+
Sbjct: 81 SSQDGQKIGEPWDYQKKFDTTNFFKFTEASSFSWVDEE---PAEECDINDDHKKLLAQVDVWEDAVTNSPRVFCGIYTHQNNHATKVMAIKETWARHCDGFVAFSDVADDAILSFKIKHEGPEEYSNMWQKSRAIWKYINFHYKDDFDWFVLGGDDLFLIMENLRKYLLSDEIIRAAGGLQNGGTNPMFLGRRLQRFGEQHRIYNNGGASYVMNQASVGLLGNHLDDSQCQPHTKQSWEDVLVSRCLKVNGVMAFDTRDDLGRERFHPFSPAVHIGYRMPETPEDRLVSGFLVGGWYGIQAIELQFGLECCSQDSISFHYIDEQLMRRLYHLVYSCPE 415
BLAST of mRNA_C-linearis_contig8.15622.1 vs. uniprot
Match: D7FK30_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK30_ECTSI) HSP 1 Score: 419 bits (1078), Expect = 2.460e-138 Identity = 196/289 (67.82%), Postives = 231/289 (79.93%), Query Frame = 2
Query: 341 DNHKQLIDQIDVWGGAAKTKPRLLCGIYTHEKNHNTKVKAIKETWASRCDGFVAFSDKVDLNVPSFKIKHEGPEEWNNMWQKSRAIWKYIDRHYKNDFDWFVLGGDDIFLIVENLRKYLLSAEIKKAAGGFQNGGTNPMYLGRRFRPKGNDERIFNSGGAAYVLNQASLGLLASQLDTPACHAHQECSWEDVNVAACLRQQGVVAFDTRDALGRERFHPFTPGQHLSYQIPRQNPEK--------DWYIEYSIDLKTGRECCSRNSLSFHYVDEKLMRRLYHLLYSCPK 1183
D+HK+L+ QIDVW GA + PR+ CGIYTHE NH TKVKA+KETWAS CDGFVAFSD DL + +FKIKHEGPEE++NMWQK+RAIWKYI+ HYK+DFDWFVLGGDD+FLIVENLRKYLLS EIK AAGG +NGG NPMYLGRRFR G D RI+N+GG +YVLNQAS+GLLAS LD AC H WED+ VA CL++ GV AFDTRDALGRERFHPFTP H Y++P++ ++ WYI IDLK GRECCS++SLSFHYV E++ RRL+ L+Y+CPK
Sbjct: 52 DDHKKLLAQIDVWEGAEEGAPRIFCGIYTHENNHATKVKAVKETWASHCDGFVAFSDVTDLELHTFKIKHEGPEEYSNMWQKARAIWKYINFHYKDDFDWFVLGGDDLFLIVENLRKYLLSDEIKGAAGGLENGGPNPMYLGRRFRFIGED-RIYNNGGPSYVLNQASVGLLASHLDDDACQPHAAKHWEDILVAWCLKKNGVEAFDTRDALGRERFHPFTPAAHFGYRMPQKLEDRLVSGCVVGAWYIIQGIDLKFGRECCSQDSLSFHYVGEQVSRRLHDLIYACPK 339
BLAST of mRNA_C-linearis_contig8.15622.1 vs. uniprot
Match: A0A6H5JVG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVG9_9PHAE) HSP 1 Score: 418 bits (1075), Expect = 1.080e-136 Identity = 205/361 (56.79%), Postives = 252/361 (69.81%), Query Frame = 2
Query: 179 RLASAQDLNLSDAEEQIIGTPWNYQQRFDPKLFARSSE-----WAPNLYALPDGVCDVNDNHKQLIDQIDVWGGAAKTKPRLLCGIYTHEKNHNTKVKAIKETWASRCDGFVAFSDKVDLNVPSFKIKHEGPEEWNNMWQKSRAIWKYIDRHYKNDFDWFVLGGDDIFLIVENLRK-YLLSAEIKKAAGGFQNGGTNPMYLGRRFRPKGNDERIFNSGGAAYVLNQASLGLLASQLDTPACHAHQECSWEDV------------NVAACLRQQGVVAFDTRDALGRERFHPFTPGQHLSYQIPRQNPEK--------DWYIEYSIDLKTGRECCSRNSLSFHYVDEKLMRRLYHLLYSCPK 1183
R A A D +S + Q IG PW+YQ++FD F + +E W P CD+ND+HK+L+ Q+DVW A PR+ CGIYTH KNH TKV AIKETWA CDGFVAFSD D + S IKHEGPEE++NMWQKSRAIWKYI+ HYK+DFDWFVLGGDD+FLIVENLRK YLLS EI +AAGG QNGGTNP++LGRR + G RI+N+GGA+YV+NQAS+GLL + LD C H + SWEDV V+ CLR GV+AFDTRD LGRERFHPF+P H+ Y++P ++ WY +I+L G ECCS++S+SFHY+DE+LMRRLYHL+YSCP+
Sbjct: 66 REAEALDNPISSQDGQKIGEPWDYQEKFDTTNFFKFTEDSSFSWVDEE---PAEECDINDDHKKLLAQVDVWEDAVTNSPRVFCGIYTHHKNHATKVMAIKETWARHCDGFVAFSDVADDAILS--IKHEGPEEYSNMWQKSRAIWKYINFHYKDDFDWFVLGGDDLFLIVENLRKVYLLSDEIIRAAGGLQNGGTNPIFLGRRLQRFGEQHRIYNNGGASYVMNQASVGLLGNHLDDSRCQPHAKQSWEDVLVSISRASFKKTEVSRCLRNNGVMAFDTRDGLGRERFHPFSPAVHIGYRMPETPEDRLVSGFLVGGWYGIQAIELTFGLECCSQDSISFHYIDEQLMRRLYHLVYSCPE 421
BLAST of mRNA_C-linearis_contig8.15622.1 vs. uniprot
Match: D7FK39_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK39_ECTSI) HSP 1 Score: 408 bits (1048), Expect = 4.230e-127 Identity = 192/326 (58.90%), Postives = 232/326 (71.17%), Query Frame = 2
Query: 224 QIIGTPWNYQQRFDPKLFARSSEWAPNLYALPDGVCDVNDNHKQLIDQIDVWGGAAKTKPRLLCGIYTHEKNHNTKVKAIKETWASRCDGFVAFSDKVDLNVPSFKIKHEGPEEWNNMWQKSRAIWKYIDRHYKNDFDWFVLGGDDIFLIVENLRKYLLSAEIKKAAGGFQNGGTNPMYLGRRFRPKGNDERIFNSGGAAYVLNQASLGLLASQLDTPACHAHQECSWEDVNVAACLRQQGVVAFDTRDALGRERFHPFTPGQHLSYQIPRQNPEK--------DWYIEYSIDLKTGRECCSRNSLSFHYVDEKLMRRLYHLLYSC 1177
QI+G PW+YQ++ D F + P G CD ND+H++L+ Q+ VW GAAKT PR+ CGI T +NH T VKAIKETWAS CDGFVAFSDK D + + KIK EG EE NMWQKSRAIWKYI+ HYK DFDWF+LGGDD+FLI ENLRKYLLS E+K A GG +NGG NPMYLGRR R G D R++N+G A+YVLNQAS+GLLAS LD C H++ WED+ V+ CL++ GV AFDTRD LGRERFHPFTP H +P ++ WY++ +D K GRE S +SLSF+ VDE+LMRRLYHL+YSC
Sbjct: 162 QIVGQPWDYQEKIDGTNFLSAQSDLP-------GACDGNDDHQKLLAQVRVWEGAAKTAPRIFCGISTRHQNHRTNVKAIKETWASHCDGFVAFSDKTDQELSTLKIKREGLEEEGNMWQKSRAIWKYINFHYKEDFDWFILGGDDLFLIAENLRKYLLSDEVKSAGGGIKNGGANPMYLGRRLRVFGEDHRMYNNGRASYVLNQASVGLLASHLDDDDCQPHRKTPWEDLLVSMCLKKNGVSAFDTRDTLGRERFHPFTPATHFGQHMPLDPADRLASGIVVNAWYMDQEVDAKFGREGYSSDSLSFNDVDEQLMRRLYHLVYSC 480
BLAST of mRNA_C-linearis_contig8.15622.1 vs. uniprot
Match: A0A6H5L1N0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1N0_9PHAE) HSP 1 Score: 395 bits (1015), Expect = 4.060e-124 Identity = 199/362 (54.97%), Postives = 243/362 (67.13%), Query Frame = 2
Query: 224 QIIGTPWNYQQRFDPKLFARSSEWAPNLYALPDGVCDVNDNHKQLIDQIDVWGGAAKTKPRLLCGIYTHEKNHNTKVK---AIKETWASRCDGFVAFSDKVDLNVPSFKIKHEGPEEWNNMWQKSRAIWKYIDRHYKNDFDWFVLGGDDIFLIVENLRKYLLSAEIKKAAGGFQNGGTNPMYLGRRFRPKGNDERIFNSGGAAYVLNQASLGLLASQLDTPACHAHQECSWEDVNVAACLRQQGVVAFDTRDALGRERFHPFTPGQHLSYQ---------------IPRQNPEK--------DWYIEYSIDLKTGRECCSRNSLSFHYVDEKLMRRLYHLLYSCPKAPVKLERVDLLSAPKA 1231
QI+G PW++Q++ D F + ALP G C ND+HK+L+ Q+ VW GAAKT PR+ CGI T +NH T VK AIKETWAS CDGFVAFSDK D ++ + KIK EG EE NMWQK RAIWKYI+ HYK DFDWF+LGGDD+FLI ENLRKYLLS E+K A GG NGGTNPMYLGRR R G D R++N+G A+YVLNQAS+GLLAS LD C H++ WED+ V+ CL++ GV AFDTRD LGRERFHPFTP H Y+ +P ++ WY++ +D+K GRE S +SLSF+ VDE+LM RLYHL+YSC V +DL S P+A
Sbjct: 183 QIVGQPWDFQEKIDATNFLSTQS------ALP-GACGRNDDHKKLLAQVRVWEGAAKTAPRIFCGISTRHQNHRTNVKVGRAIKETWASHCDGFVAFSDKTDQDLNTLKIKREGLEEDGNMWQKIRAIWKYINFHYKEDFDWFILGGDDLFLIAENLRKYLLSDEVKSAGGGINNGGTNPMYLGRRLRVFGEDHRMYNNGRASYVLNQASVGLLASHLDDDDCQPHRKTPWEDLLVSMCLKKNGVSAFDTRDTLGRERFHPFTPATHFGYEPIFFMNLYVDVFGQHMPVDPADRLASGIVVNGWYMDQEVDVKFGREGYSSDSLSFNDVDEQLMWRLYHLVYSCQNDEV----LDLASLPQA 533
BLAST of mRNA_C-linearis_contig8.15622.1 vs. uniprot
Match: A0A7S2V9L2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V9L2_9STRA) HSP 1 Score: 318 bits (814), Expect = 3.950e-100 Identity = 146/267 (54.68%), Postives = 185/267 (69.29%), Query Frame = 2
Query: 377 WGGAAKTKPRLLCGIYTHEKNHNTKVKAIKETWASRCDGFVAFSDKVDLNVPSFKIKHEGPEEWNNMWQKSRAIWKYIDRHYKNDFDWFVLGGDDIFLIVENLRKYLLSAEIKKAAGGFQNGGTNPMYLGRRFRPKGNDERIFNSGGAAYVLNQASLGLLASQLDTPACHAHQECSWEDVNVAACLRQQGVVAFDTRDALGRERFHPFTPGQHLSYQIPRQNPEKDWYIEYSIDLKTGRECCSRNSLSFHYVDEKLMRRLYHLLYSC 1177
W KT+P++LC YT K H TKVKA K TWASRCDGF+ SD D VPS K+ H+GPEE+NN+WQK RA WKY+ HY+++FDWF +GGDD ++IVENLRKYLLS EI++A G P+YLGRRF+PK D IFNSGGA +VLN+ +L +L LD+ C+ + + WEDV VA CLR GV +DTRD GRERF PF PG H Y++P P+ DWY Y+I LKTG +CCS ++SFHY+ MR+++ LY C
Sbjct: 5 WPKGVKTEPKILCITYTISKYHKTKVKAQKHTWASRCDGFIVISDTDDFVVPSVKVPHQGPEEYNNIWQKVRAAWKYVYYHYRDEFDWFYMGGDDTYVIVENLRKYLLSQEIQQA----HKHGKLPLYLGRRFKPK--DGNIFNSGGAGHVLNRRALEILTLSLDSQFCNPNLKGFWEDVQVAKCLRHHGVYPYDTRDDWGRERFLPFAPGHHYKYRVP---PKPDWYANYAIGLKTGEDCCSHEAISFHYIQPDKMRKIHAHLYYC 262 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15622.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig8.15622.1 >prot_C-linearis_contig8.15622.1 ID=prot_C-linearis_contig8.15622.1|Name=mRNA_C-linearis_contig8.15622.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=402bp MLARAILGVVLFTCGLAAGAENQAAVRGAGDRDGDGDGDGDAPHEREGARback to top mRNA from alignment at C-linearis_contig8:1956890..1965696+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig8.15622.1 ID=mRNA_C-linearis_contig8.15622.1|Name=mRNA_C-linearis_contig8.15622.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=8807bp|location=Sequence derived from alignment at C-linearis_contig8:1956890..1965696+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig8:1956890..1965696+ >mRNA_C-linearis_contig8.15622.1 ID=mRNA_C-linearis_contig8.15622.1|Name=mRNA_C-linearis_contig8.15622.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2412bp|location=Sequence derived from alignment at C-linearis_contig8:1956890..1965696+ (Chordaria linearis ClinC8C monoicous)back to top |