mRNA_C-linearis_contig79.15424.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig79.15424.1
Unique NamemRNA_C-linearis_contig79.15424.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig79.15424.1 vs. uniprot
Match: A0A6H5LFZ8_9PHAE (Diaminopimelate epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LFZ8_9PHAE)

HSP 1 Score: 565 bits (1455), Expect = 2.810e-196
Identity = 287/338 (84.91%), Postives = 299/338 (88.46%), Query Frame = 1
Query:   85 MWSSAVALALLGTHHASGFVVGP--ANGALGKARVRHGAS----STVEMSAAAGAAAKLVPFSKYQGLGNDFILVDNREEEEPMLTAGESADLCDRRYGIGGDGVIFALPGSNGMDYSMRIINSDGSEPEMCGNGIRCMARFLADLEGKKEAEYKIHTLAGTIIPVAREDGLVTVDMGPPELKGPKVPSTLPTNGDGVVLKEPIQVDGKEWEVTCVSMGNPHAVVFAPDVDALDLPALGPQFETHPSFPAKINTEFVQVLTRGHVKMVVWERGCGITQACGTGACALVVAAVLAGLADRTCTVTLPGGDLLIEWRESDGKVYMTGPAELAFQGDAVVR 1080
            MW + +AL  +G HHA+ FVV P  A G  G A  R  A+    STV MSA      KLVPFSKYQGLGNDFILVDNREE EPMLTA ESA LCDRRYGIGGDGVIFALPGS+ MDYSMRIINSDGSEPEMCGNGIRCMARFLADLEGKK+AEYKIHTLAGTIIP+AREDGLVTVDMGPPEL GPKVPSTLPTN DGVVLKEPI+VDGK+WEVTCVSMGNPHAVVF PDVDALDLP +GPQFETHPSFPAKINTEFVQVL RGHVKMVVWERGCGITQACGTGACALVVA+VLAGLADR CTVTLPGGDL IEWRESDGKVYMTGPAELAFQGDAVVR
Sbjct:    1 MWPTTIALLAIGAHHAAAFVVAPGTALGRQGPAAARSAATRCGASTVAMSAT-----KLVPFSKYQGLGNDFILVDNREEAEPMLTAEESASLCDRRYGIGGDGVIFALPGSDDMDYSMRIINSDGSEPEMCGNGIRCMARFLADLEGKKKAEYKIHTLAGTIIPLAREDGLVTVDMGPPELNGPKVPSTLPTNDDGVVLKEPIKVDGKDWEVTCVSMGNPHAVVFVPDVDALDLPTIGPQFETHPSFPAKINTEFVQVLNRGHVKMVVWERGCGITQACGTGACALVVASVLAGLADRKCTVTLPGGDLQIEWRESDGKVYMTGPAELAFQGDAVVR 333          
BLAST of mRNA_C-linearis_contig79.15424.1 vs. uniprot
Match: A0A835YU85_9STRA (Diaminopimelate epimerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU85_9STRA)

HSP 1 Score: 404 bits (1037), Expect = 1.430e-133
Identity = 193/277 (69.68%), Postives = 223/277 (80.51%), Query Frame = 1
Query:  250 FSKYQGLGNDFILVDNREEEEPMLTAGESADLCDRRYGIGGDGVIFALPGSNGMDYSMRIINSDGSEPEMCGNGIRCMARFLADLEGKKEAEYKIHTLAGTIIPVAREDGLVTVDMGPPELKGPKVPSTLPTNGDGVVLKEPIQVDGKEWEVTCVSMGNPHAVVFAPDVDALDLPALGPQFETHPSFPAKINTEFVQVLTRGHVKMVVWERGCGITQACGTGACALVVAAVLAGLADRTCTVTLPGGDLLIEWRESDGKVYMTGPAELAFQGDAVVR 1080
            F KY+GLGNDFILVDNRE  +P+L+  +SA LCDR +GIGGDGVIFALPG   +DY MRI NSDGSEPEMCGNGIRCMARFLADL+G+KEA Y+I T AG I+PV    GLVTVDMGPPEL GPKVP+TLPT  DG V+  P++V G++W VTCVSMGNPHA+VF  D++ + L  +GP FE +  FPA+ NTEFVQVL+R H+KM VWERG G T ACGTGACALVVAAVL GLADR CTVTLPGGDL+I+WRE+D KVYMTGPA   F G   V+
Sbjct:   28 FHKYEGLGNDFILVDNRETADPVLSPEQSAKLCDRNFGIGGDGVIFALPGEGDLDYKMRIYNSDGSEPEMCGNGIRCMARFLADLDGEKEATYRIGTGAGLIVPVVGGGGLVTVDMGPPELNGPKVPTTLPTGADGAVVAAPLEVAGQQWSVTCVSMGNPHAIVFVNDLNTIKLADIGPLFEHNAVFPARTNTEFVQVLSRSHLKMKVWERGAGATLACGTGACALVVAAVLNGLADRKCTVTLPGGDLVIDWREADNKVYMTGPATPVFSGSVRVQ 304          
BLAST of mRNA_C-linearis_contig79.15424.1 vs. uniprot
Match: A0A7R9YC33_9STRA (Diaminopimelate epimerase n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YC33_9STRA)

HSP 1 Score: 387 bits (994), Expect = 6.160e-127
Identity = 190/288 (65.97%), Postives = 226/288 (78.47%), Query Frame = 1
Query:  232 AAKLVPFSKYQGLGNDFILVDNREEEEPMLTAGESADLCDRRYGIGGDGVIFALPGSNGMDYSMRIINSDGSEPEMCGNGIRCMARFLADLEGKKEAE--YKIHTLAGTIIPVAREDGLVTVDMGPPELKGPKVPSTL-PTNGDGVVLKEPIQVD---GKEWEVTCVSMGNPHAVVFAPDVDALDLPALGPQFETHPSFPAKINTEFVQVLTRGHVKMVVWERGCGITQACGTGACALVVAAVLAGLADRTCTVTLPGGDLLIEWRESDGKVYMTGPAELAFQGDAVV 1077
            AAK V FSKYQGLGNDF+LVDNR+ EEP+LT  ES  LCDR +G+G DGVIFA+PG +G DYSMRI NSDGSEPEMCGNGIRCMA+FL DL+G   AE  YKI TLAGT++P     G++TVDMG PEL+GP+VP+TL PT  D  V+  P+      GK+W+VTCVSMGNPH + F  D+DA+DL A+GPQFE HP FPA++NTEFVQVL++ H+KM VWERG G T ACGTGACAL VAAVL  L DR  TVTLPGGDL+IEW E D ++ MTGPA+L F G+A++
Sbjct:   29 AAKKVAFSKYQGLGNDFLLVDNRDAEEPILTPDESEALCDRHFGVGADGVIFAMPGRDGCDYSMRIYNSDGSEPEMCGNGIRCMAKFLQDLDGSSGAEKQYKIWTLAGTMVPTVVASGMITVDMGEPELRGPEVPTTLKPTRDDSAVIDAPMAAPLPGGKDWKVTCVSMGNPHCITFVDDLDAVDLAAVGPQFENHPVFPARVNTEFVQVLSKSHLKMKVWERGAGPTLACGTGACALHVAAVLNNLCDRKATVTLPGGDLIIEWAE-DNRLLMTGPADLVFSGEAML 315          
BLAST of mRNA_C-linearis_contig79.15424.1 vs. uniprot
Match: A0A7S2S1Q0_9STRA (Diaminopimelate epimerase n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S1Q0_9STRA)

HSP 1 Score: 377 bits (967), Expect = 1.130e-122
Identity = 189/279 (67.74%), Postives = 222/279 (79.57%), Query Frame = 1
Query:  244 VPFSKYQGLGNDFILVDNREEEEPMLTAGESADLCDRRYGIGGDGVIFALPGSNGMDYSMRIINSDGSEPEMCGNGIRCMARFLADLEGKK--EAEYKIHTLAGTIIPVAREDGLVTVDMGPPELKGPKVPSTL-PTNGDGVVLKEPIQVDGKEWEVTCVSMGNPHAVVFAPDVDALDLPALGPQFETHPSFPAKINTEFVQVLTRGHVKMVVWERGCGITQACGTGACALVVAAVLAG-LADRTCTVTLPGGDLLIEWRESDGKVYMTGPAELAFQGD 1068
            V F KY GLGNDFILVDNR   +P+++  ++A +CDR +G+GGDGVIFALP S   DY+MRI NSDGSEPEMCGNGIRCMARFL  L+G +  E  Y I+T AG IIPV R DGLVTVDMGPP L+GPKVP+TL PT GD VV+  P++V  ++WEVTCVSMGNPHAVVF  +VD+LDL  +GPQFE+HP FPA+INTEFV+V +  H+KM VWERG G T ACGTGACAL VAA+LAG  ++RTC VTLPGGDL IEWRE + + YMTGPAEL F GD
Sbjct:   50 VAFQKYHGLGNDFILVDNRHSTDPVMSPEQAARMCDRNFGVGGDGVIFALP-SESADYAMRIYNSDGSEPEMCGNGIRCMARFLQKLDGSEGTETTYTINTGAGPIIPVIRGDGLVTVDMGPPILEGPKVPTTLAPTQGD-VVINAPLRVADQDWEVTCVSMGNPHAVVFIDNVDSLDLHHVGPQFESHPEFPARINTEFVEVKSPTHLKMKVWERGAGPTLACGTGACALTVAAILAGKTSERTCVVTLPGGDLEIEWREENNRCYMTGPAELVFSGD 326          
BLAST of mRNA_C-linearis_contig79.15424.1 vs. uniprot
Match: A0A7S2HNF9_9STRA (Diaminopimelate epimerase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HNF9_9STRA)

HSP 1 Score: 371 bits (952), Expect = 1.880e-120
Identity = 186/280 (66.43%), Postives = 217/280 (77.50%), Query Frame = 1
Query:  244 VPFSKYQGLGNDFILVDNREEEEPMLTAGESADLCDRRYGIGGDGVIFALPGSNG-MDYSMRIINSDGSEPEMCGNGIRCMARFLADLEGKKEA---EYKIHTLAGTIIPVAREDGLVTVDMGPPELKGPKVPSTL-PTNGDGVVLKEPIQVDGKEWEVTCVSMGNPHAVVFAPDVDALDLPALGPQFETHPSFPAKINTEFVQVLTRGHVKMVVWERGCGITQACGTGACALVVAAVLAG-LADRTCTVTLPGGDLLIEWRESDGKVYMTGPAELAFQG 1065
            V F KYQGLGNDFIL+DNR++ EP+LT  ++  +CDR +G+GGDGVIFALP S    DY MRI NSDGSEPEMCGNGIRCM +F+  +EG  E     Y I T AG IIP  REDGLVTVDMG P L+G KVP+TL PT  DG+VL  P++V G+EW VTCVSMGNPHA+VF  D++A+DL ++GP FET+P FPAKINTEFVQVL   H+KM VWERG G+T ACGTGACAL VAA+ +G   +RTCTV LPGGDL IEWRESDGK+YMTG AE  F G
Sbjct:   43 VEFEKYQGLGNDFILIDNRDDPEPLLTPAQAERMCDRNFGVGGDGVIFALPASEAESDYRMRIYNSDGSEPEMCGNGIRCMTKFIQKIEGGAETAKESYHISTGAGPIIPKIREDGLVTVDMGFPILEGSKVPTTLQPTKSDGMVLDAPLEVMGQEWLVTCVSMGNPHAIVFVDDLEAVDLNSVGPVFETNPVFPAKINTEFVQVLDPTHLKMKVWERGAGVTLACGTGACALTVAAIASGRTTERTCTVHLPGGDLDIEWRESDGKIYMTGAAEPVFDG 322          
BLAST of mRNA_C-linearis_contig79.15424.1 vs. uniprot
Match: A0A8J5XME3_DIALT (Diaminopimelate epimerase n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XME3_DIALT)

HSP 1 Score: 366 bits (940), Expect = 5.950e-119
Identity = 182/287 (63.41%), Postives = 215/287 (74.91%), Query Frame = 1
Query:  226 GAAAKLVPFSKYQGLGNDFILVDNREEEEPMLTAGESADLCDRRYGIGGDGVIFALPGSNGMDYSMRIINSDGSEPEMCGNGIRCMARFLADLEGKKEAE-YKIHTLAGTIIPVAREDGLVTVDMGPPELKGPKVPSTLPTNGDGVVLKEPIQVDGKEWEVTCVSMGNPHAVVFAPDVDALDLP--ALGPQFETHPSFPAKINTEFVQVLTRGHVKMVVWERGCGITQACGTGACALVVAAVLAGLADRTCTVTLPGGDLLIEWRESDGKVYMTGPAELAFQGDAVV 1077
            GA    + FSKY G+GNDFILVDNR   E +LT  ++  +CDR +GIGGDGVIFALPG +G DY+MRIINSDGSEPEMCGNGIRCMA+F+A LEG+  +  Y I T AG IIP    DGLV VDMG P L G KVP+TLP +  G V+  P+ V G+ W VTCVSMGNPHA+VF   +D   LP   +GP FE H +FPA+ NTEFV+VL+R H++M VWERG G T ACGTGACAL+VAAVL GLA+R  TV+LPGGDL IEWRESDGK+ MTGPAELA+ G   +
Sbjct:   20 GAGGSQLAFSKYHGIGNDFILVDNRASRELLLTPAQAERMCDRNFGIGGDGVIFALPGEDGADYAMRIINSDGSEPEMCGNGIRCMAKFVAALEGRATSHTYTISTRAGPIIPALTADGLVAVDMGRPILDGAKVPTTLPADASGRVIGAPLDVAGRRWAVTCVSMGNPHAIVFVDSLDESSLPLSTIGPLFEKHAAFPARTNTEFVKVLSRTHLQMRVWERGAGATLACGTGACALLVAAVLNGLAERRATVSLPGGDLEIEWRESDGKITMTGPAELAYTGHVAL 306          
BLAST of mRNA_C-linearis_contig79.15424.1 vs. uniprot
Match: A0A2V0NX36_9CHLO (Diaminopimelate epimerase n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NX36_9CHLO)

HSP 1 Score: 365 bits (936), Expect = 3.340e-118
Identity = 185/298 (62.08%), Postives = 222/298 (74.50%), Query Frame = 1
Query:  205 VEMSAAAGAAAKL-VPFSKYQGLGNDFILVDNREEEEPMLTAGESADLCDRRYGIGGDGVIFALPGSNGMDYSMRIINSDGSEPEMCGNGIRCMARFLADLEGKKEAEYKIHTLAGTIIPVAREDGLVTVDMGPPELKGPKVPSTLP-TNGDGVVLKEPIQVDGKEWEVTCVSMGNPHAVVFAPD-----VDALDLPALGPQFETHPSFPAKINTEFVQVLTRGHVKMVVWERGCGITQACGTGACALVVAAVLAGLADRTCTVTLPGGDLLIEWRESDGKVYMTGPAELAFQGDAVV 1077
            +++ AAA AAAK  + F KYQGLGNDFILVDNR   EP+LT  ++A LCDR +GIGGDGVIFALP     D +MRI NSDGSEPEMCGNGIRC+ARF+AD++G    +Y+IHTLAG I P    DG V VDMG P L GP+VP+TLP T   G V++ P+ + G+ W +TCVSMGNPHAV+++ +     VD LD+  +GPQFE++  FPA+ NTEFV+VL RGHV+MVVWERG G T ACGTGACA VVA VL G  DR C V LPGG L IEWRE+D ++YMTGPAELAF G   V
Sbjct:   20 LQVRAAAAAAAKTTLNFKKYQGLGNDFILVDNRHAPEPILTPDQAAALCDRNFGIGGDGVIFALPPVGATDLTMRIYNSDGSEPEMCGNGIRCLARFVADVDGAAARKYRIHTLAGLIQPELLGDGQVCVDMGEPILDGPRVPTTLPPTREGGAVVEAPLPLAGRRWGITCVSMGNPHAVIYSANGAPIKVDDLDIFDIGPQFESNTVFPARTNTEFVEVLNRGHVRMVVWERGAGRTLACGTGACATVVAGVLEGKVDRRCRVDLPGGPLHIEWREADNRIYMTGPAELAFSGQVAV 317          
BLAST of mRNA_C-linearis_contig79.15424.1 vs. uniprot
Match: A0A6T5Q8N6_HETAK (Diaminopimelate epimerase n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5Q8N6_HETAK)

HSP 1 Score: 364 bits (934), Expect = 1.080e-117
Identity = 175/284 (61.62%), Postives = 215/284 (75.70%), Query Frame = 1
Query:  235 AKLVPFSKYQGLGNDFILVDNREEEEPMLTAGESADLCDRRYGIGGDGVIFALPGSNGMDYSMRIINSDGSEPEMCGNGIRCMARFLADLEGKKE--AEYKIHTLAGTIIPVAREDGLVTVDMGPPELKGPKVPSTLPTNGDGVVLKEPIQVDGKEWEVTCVSMGNPHAVVFAPDVDALDLPALGPQFETHPSFPAKINTEFVQVLTRGHVKMVVWERGCGITQACGTGACALVVAAVLAGLADRTCTVTLPGGDLLIEWRESDGKVYMTGPAELAFQGDAVVR 1080
            A  + FSKY+GLGNDFILVDNRE  EP +T  ++  LC+R +GIGGDGVIF LPG  G D++MRI NSDGSEPEMCGNGIR   +++A LEGK+     Y  HTLAG II     DGLV VDMG P  K   +P+TL  N DG VL +P++VDGK +EV+CVSMGNPHA+VF  D+D LDL  +GP FE HP+FPA++NTEFVQVL+R H+KM VWERG G T ACGTG CAL VAAVL G A+R+  VTLPGGDLLI+W+E DG+++MTGP +  F G+A+++
Sbjct:   49 ADTISFSKYEGLGNDFILVDNRESMEPKITPDQAIKLCNRNFGIGGDGVIFVLPGQKGTDFTMRIFNSDGSEPEMCGNGIRVFTKYIAKLEGKENEPVRYTFHTLAGEIIGDVTADGLVRVDMGFPIFKAADIPTTLAENEDGYVLNQPLEVDGKTYEVSCVSMGNPHAIVFVDDLDQLDLYKVGPIFEKHPAFPARVNTEFVQVLSRDHLKMKVWERGAGPTLACGTGTCALAVAAVLTGKAERSVRVTLPGGDLLIDWQE-DGRIFMTGPGDFVFSGEALLK 331          
BLAST of mRNA_C-linearis_contig79.15424.1 vs. uniprot
Match: A0A2P6VCJ0_9CHLO (Diaminopimelate epimerase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VCJ0_9CHLO)

HSP 1 Score: 362 bits (930), Expect = 4.140e-117
Identity = 180/285 (63.16%), Postives = 209/285 (73.33%), Query Frame = 1
Query:  235 AKLVPFSKYQGLGNDFILVDNREEEEPMLTAGESADLCDRRYGIGGDGVIFALPGSNGMDYSMRIINSDGSEPEMCGNGIRCMARFLADLEGKKEAEYKIHTLAGTIIPVAREDGLVTVDMGPPELKGPKVPSTL-PTNGDGVVLKEPIQVDGKEWEVTCVSMGNPHAVVFAPD------VDALDLPALGPQFETHPSFPAKINTEFVQVLTRGHVKMVVWERGCGITQACGTGACALVVAAVLAGLADRTCTVTLPGGDLLIEWRESDGKVYMTGPAELAFQGD 1068
            A  + F+KYQGLGNDFILVDNR + +P++T  ++  LCDR +GIGGDGVIFALPG NG DY+MRI NSDGSEPEMCGNGIRC+ARF+AD++G +  +Y++HTLAG I P    DG V VDMG P LK   VP+TL PT G+ VV +  + VDGKEW  TCVSMGNPHA+ F         VD LDLP +GP FE +  FPA+ NTEFV+VLT  HV+M VWERG G T ACGTGACA VVA VL G   RTC V LPGG L IEWRESD  +YMTGPAEL F G 
Sbjct:   44 AAAIKFAKYQGLGNDFILVDNRHQADPVITPEQAVTLCDRNFGIGGDGVIFALPGENGTDYAMRIFNSDGSEPEMCGNGIRCLARFVADIDGSQPRQYRVHTLAGLIQPALLADGQVCVDMGEPILKAADVPTTLQPTQGEAVVQQR-LTVDGKEWLFTCVSMGNPHAITFGLSDGTPIKVDELDLPRMGPLFEHNAVFPARTNTEFVEVLTPSHVRMHVWERGAGRTLACGTGACATVVAGVLEGKTQRTCQVDLPGGPLHIEWRESDNHIYMTGPAELVFSGS 327          
BLAST of mRNA_C-linearis_contig79.15424.1 vs. uniprot
Match: E1ZNM7_CHLVA (Diaminopimelate epimerase n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZNM7_CHLVA)

HSP 1 Score: 361 bits (927), Expect = 4.610e-117
Identity = 183/289 (63.32%), Postives = 214/289 (74.05%), Query Frame = 1
Query:  235 AKLVPFSKYQGLGNDFILVDNREEEEPMLTAGESADLCDRRYGIGGDGVIFALPGSNGMDYSMRIINSDGSEPEMCGNGIRCMARFLA-DLEGKKEAEYKIHTLAGTIIPVAREDGLVTVDMGPPELKGPKVPSTL-PTNGDGVVLKEPIQVDGKEWEVTCVSMGNPHAVVF------APDVDALDLPALGPQFETHPSFPAKINTEFVQVLTRGHVKMVVWERGCGITQACGTGACALVVAAVLAGLADRTCTVTLPGGDLLIEWRESDGKVYMTGPAELAFQGDAVV 1077
            A  V F+KYQGLGNDFILVDNR + EP++T  ++  LCDR +GIGGDGVIFALP  NG DYSMRI NSDGSEPEMCGNGIRC+ARF+A D   +      +HTLAG I P    DG V VDMG P L+GP VP+TL PT G+ VV ++ + VDGKEW +TCVSMGNPHA+ F      +  VD++DLP +GP+FE +P FPA+ NTEFV+VL+R HV+MVVWERG G T ACGTGACA VVA VL G  DR+C V LPGG L IEWRESD  +YMTGPAEL F G   V
Sbjct:   16 AAAVKFAKYQGLGNDFILVDNRHQLEPVVTPEQAVKLCDRNFGIGGDGVIFALPSENGTDYSMRIFNSDGSEPEMCGNGIRCLARFVAGDPRARGAGAQLVHTLAGLIQPALLPDGQVCVDMGEPILRGPDVPTTLQPTQGEAVVQQK-LAVDGKEWLMTCVSMGNPHAITFGLADGSSIKVDSIDLPGIGPKFEHNPVFPARTNTEFVEVLSRSHVRMVVWERGAGATLACGTGACATVVAGVLEGHTDRSCQVDLPGGPLHIEWRESDNHIYMTGPAELVFAGSVDV 303          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig79.15424.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LFZ8_9PHAE2.810e-19684.91Diaminopimelate epimerase n=2 Tax=Ectocarpus TaxID... [more]
A0A835YU85_9STRA1.430e-13369.68Diaminopimelate epimerase n=1 Tax=Tribonema minus ... [more]
A0A7R9YC33_9STRA6.160e-12765.97Diaminopimelate epimerase n=2 Tax=Pinguiococcus py... [more]
A0A7S2S1Q0_9STRA1.130e-12267.74Diaminopimelate epimerase n=2 Tax=Rhizochromulina ... [more]
A0A7S2HNF9_9STRA1.880e-12066.43Diaminopimelate epimerase n=1 Tax=Dictyocha specul... [more]
A0A8J5XME3_DIALT5.950e-11963.41Diaminopimelate epimerase n=2 Tax=Diacronema luthe... [more]
A0A2V0NX36_9CHLO3.340e-11862.08Diaminopimelate epimerase n=1 Tax=Raphidocelis sub... [more]
A0A6T5Q8N6_HETAK1.080e-11761.62Diaminopimelate epimerase n=2 Tax=Heterosigma akas... [more]
A0A2P6VCJ0_9CHLO4.140e-11763.16Diaminopimelate epimerase n=1 Tax=Micractinium con... [more]
E1ZNM7_CHLVA4.610e-11763.32Diaminopimelate epimerase n=1 Tax=Chlorella variab... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig79contigC-linearis_contig79:624547..629071 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score539.7
Seed ortholog evalue9.9e-151
Seed eggNOG ortholog2880.D7G034
KEGG rclassRC00302
KEGG koko:K01778
KEGG ReactionR02735
KEGG Pathwayko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230
KEGG ModuleM00016,M00525,M00527
Hectar predicted targeting categorysignal peptide
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008837,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0016053,GO:0016853,GO:0016854,GO:0016855,GO:0019752,GO:0036361,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0046451,GO:0047661,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
EggNOG free text desc.diaminopimelate epimerase activity
EggNOG OGs2QQKJ@2759,COG0253@1
Ec32 ortholog descriptiondiaminopimelate epimerase
Ec32 orthologEc-06_009100.1
EC5.1.1.7
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons6
Model size2019
Cds size999
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig79.15424.1prot_C-linearis_contig79.15424.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig79 625483..628987 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930497.8704543-UTR-C-linearis_contig79:624546..6254821622930497.8704543-UTR-C-linearis_contig79:624546..625482Chordaria linearis ClinC8C monoicousUTRC-linearis_contig79 624547..625482 -
1690881100.3992362-UTR-C-linearis_contig79:624546..6254821690881100.3992362-UTR-C-linearis_contig79:624546..625482Chordaria linearis ClinC8C monoicousUTRC-linearis_contig79 624547..625482 -
1622930498.0067933-UTR-C-linearis_contig79:628987..6290711622930498.0067933-UTR-C-linearis_contig79:628987..629071Chordaria linearis ClinC8C monoicousUTRC-linearis_contig79 628988..629071 -
1690881100.4889605-UTR-C-linearis_contig79:628987..6290711690881100.4889605-UTR-C-linearis_contig79:628987..629071Chordaria linearis ClinC8C monoicousUTRC-linearis_contig79 628988..629071 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930497.8877287-CDS-C-linearis_contig79:625482..6257251622930497.8877287-CDS-C-linearis_contig79:625482..625725Chordaria linearis ClinC8C monoicousCDSC-linearis_contig79 625483..625725 -
1690881100.4134948-CDS-C-linearis_contig79:625482..6257251690881100.4134948-CDS-C-linearis_contig79:625482..625725Chordaria linearis ClinC8C monoicousCDSC-linearis_contig79 625483..625725 -
1622930497.90507-CDS-C-linearis_contig79:626058..6262171622930497.90507-CDS-C-linearis_contig79:626058..626217Chordaria linearis ClinC8C monoicousCDSC-linearis_contig79 626059..626217 -
1690881100.4233227-CDS-C-linearis_contig79:626058..6262171690881100.4233227-CDS-C-linearis_contig79:626058..626217Chordaria linearis ClinC8C monoicousCDSC-linearis_contig79 626059..626217 -
1622930497.9262052-CDS-C-linearis_contig79:626847..6269641622930497.9262052-CDS-C-linearis_contig79:626847..626964Chordaria linearis ClinC8C monoicousCDSC-linearis_contig79 626848..626964 -
1690881100.4315429-CDS-C-linearis_contig79:626847..6269641690881100.4315429-CDS-C-linearis_contig79:626847..626964Chordaria linearis ClinC8C monoicousCDSC-linearis_contig79 626848..626964 -
1622930497.9520564-CDS-C-linearis_contig79:627382..6274961622930497.9520564-CDS-C-linearis_contig79:627382..627496Chordaria linearis ClinC8C monoicousCDSC-linearis_contig79 627383..627496 -
1690881100.4466481-CDS-C-linearis_contig79:627382..6274961690881100.4466481-CDS-C-linearis_contig79:627382..627496Chordaria linearis ClinC8C monoicousCDSC-linearis_contig79 627383..627496 -
1622930497.9708173-CDS-C-linearis_contig79:628197..6282941622930497.9708173-CDS-C-linearis_contig79:628197..628294Chordaria linearis ClinC8C monoicousCDSC-linearis_contig79 628198..628294 -
1690881100.4611335-CDS-C-linearis_contig79:628197..6282941690881100.4611335-CDS-C-linearis_contig79:628197..628294Chordaria linearis ClinC8C monoicousCDSC-linearis_contig79 628198..628294 -
1622930497.9876616-CDS-C-linearis_contig79:628718..6289871622930497.9876616-CDS-C-linearis_contig79:628718..628987Chordaria linearis ClinC8C monoicousCDSC-linearis_contig79 628719..628987 -
1690881100.4725473-CDS-C-linearis_contig79:628718..6289871690881100.4725473-CDS-C-linearis_contig79:628718..628987Chordaria linearis ClinC8C monoicousCDSC-linearis_contig79 628719..628987 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig79.15424.1

>prot_C-linearis_contig79.15424.1 ID=prot_C-linearis_contig79.15424.1|Name=mRNA_C-linearis_contig79.15424.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=333bp
MWSSAVALALLGTHHASGFVVGPANGALGKARVRHGASSTVEMSAAAGAA
AKLVPFSKYQGLGNDFILVDNREEEEPMLTAGESADLCDRRYGIGGDGVI
FALPGSNGMDYSMRIINSDGSEPEMCGNGIRCMARFLADLEGKKEAEYKI
HTLAGTIIPVAREDGLVTVDMGPPELKGPKVPSTLPTNGDGVVLKEPIQV
DGKEWEVTCVSMGNPHAVVFAPDVDALDLPALGPQFETHPSFPAKINTEF
VQVLTRGHVKMVVWERGCGITQACGTGACALVVAAVLAGLADRTCTVTLP
GGDLLIEWRESDGKVYMTGPAELAFQGDAVVR*
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mRNA from alignment at C-linearis_contig79:624547..629071-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig79.15424.1 ID=mRNA_C-linearis_contig79.15424.1|Name=mRNA_C-linearis_contig79.15424.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=4525bp|location=Sequence derived from alignment at C-linearis_contig79:624547..629071- (Chordaria linearis ClinC8C monoicous)
CCGCACACCACGCTGCGCAGCAACGGCCCGCACCTCCCTGCTCCTGCGCT CCTGGTCACTCGCAGCAGGAAAACAGCGAGCACGATGTGGTCATCCGCGG TAGCATTAGCGCTTTTGGGCACTCACCATGCCTCAGGCTTCGTGGTGGGC CCAGCGAACGGCGCCCTTGGCAAAGCTCGAGTACGGCATGGCGCGTCCTC CACGGTTGAGATGAGTGCTGCTGCTGGTGCCGCCGCAAAGCTTGTGCCCT TTTCCAAGTACCAGGGGCTGGGCAACGACTTCATCCTTGTGGACAACAGA GAAGAAGAGGAGCCCATGCTCACGGCTGGAGAATCTGCTGACTTGTGCGA CAGGTGTGTCAGGGATGAAAGATGAAAGCCACAGAAGGTTGTTTGATGAT GCGCGACCCAGCCCAGCCGGCGAACATGATCCCTGCCGACGACCGGGCAC GCGGGCATGTGTGTTGTTGGCTGGCGGAGTTGTGGGTGGGTGGAAGGTTG TAAACATCGCTGTCGGCTTCGTGCGCCTTGAATGTGTCATTGAGTGCACA GGCGGCTGGGAAGCTTTGAAATTTGTGCGTTTACAAGCGCACATCGCTGA ACATGATACCGCCATCTGCGGCGCACAGCTGCGGTGCACGACGGCTATGG TTTCCTCTTTCCCGCCTTCGGACTGCTGTTATGGCGGTGAGGTACCCGCA TCTCGCCTGTTTATCTTTGTTCTGTTGCATCCTCAACTGTGTCTCTAATG GTTTGCCAACCTGTCGCTGTCTTGCAGGCGATACGGTATCGGCGGTGACG GCGTCATCTTCGCGCTGCCAGGGTCGAACGGCATGGATTACTCCATGCGG ATCATCAACTCCGATGGCTCTGAGGTGACGAAAAGCCTTGCGAGCCCGTA CTGCTGTAGCTGGTAAAAGTACGTGCAGCGTATGCACATGTCGAAGATAG ATTCAGGATATCCCGCATTTATTCGGAAGTGGTGTGTGGACTCAAGCGGG CATGACGTCCCCGTACATGTGCGGTATGCGTACCACGCGCGACCGCAGCC CTTACCTCGGTGGCAAGGAAGCTGCCGCATTGTAAGCTCTTCACTTCATG GTGATAATCCTATAATAGTACTAAGCAGACCCTAGGAAAGTGGGACGTGG CCGTAGTTGATGGATCATGATGGAATAGACCAGGCAGACGTTAGGTCGTT TCTTCGATTGTATCCCCTCGACTTCTTTTTTCCGACCGGTATCTTTGTCT CCATGTACGAGACCAAAACTGGTGTTTACTTCTATGTAGCCTGCTGGACA CTGGACACCGATGTTACGAAAAGTACAACGGCAGTGCATTAGCACCCTGC ATGAGAGCGCCACGCAGGACCGATTTTCGTGTGCGGTGCTATGCGGCTCT CCTTGGAAGCATGCTATCGCGACCTAAGAGTACGTGGTAGGTGGTAAGCT ATTAGCCTCGGTCAACCTTCGAGGTCGCCGTCCCCCCTGCTGTGTTTGGA GTTGATTTTGACTTTCGCGCCGTCTTCTCAACACGCGCACCCGCTTCCCT CTTCACACCGACGCGACACACGCAGCCGGAGATGTGCGGCAACGGAATCC GCTGCATGGCGAGGTTCCTGGCTGACCTGGAGGGAAAGAAGGAGGCCGAG TACAAGATCCACACGCTGGCGGGGACAATCATTCCCGTGGTGAGAGCTCC TGCTGTAGCTCCAAGAAGCACAACTTTTTCCCGCAGCGCAGCAGCTGCGA GAAAGCTGCCGTGCAAGTGCCGTAGAGCGCGCGCCCTGTTTGTTGGCCTC AAAAATACACTGCGGGCCGTGCAAAGCAGTCAAGCAATGTTGAGTTTGTG ACCAAGACAGCAGCGTTGACTCTTCCGCGCCGCCAAACATCGTAGTAGGG GGGCGGTTGCGCCATGCAGTGATGGTGCATTGCATGTGAAAAAACAAAAG GCTCGTTGGCTCGTTAGCTCGCCCTGGCCAACAGACCCTTTTCTGCTTGC TCCCGCGCTACAATTTTCAATTTCCCCCGTTTCTTTTCCCTCGCGAAAAC ACTTCTCCCCATCTGCTGGTTGGTGATTGGTGACTGGTGAATCGACGGGC GGAGTAGGCGAGAGAGGACGGGCTGGTGACCGTGGACATGGGGCCGCCCG AGCTTAAGGGGCCCAAGGTGCCCAGCACCCTCCCCACCAATGGCGACGGC GTTGTGTTGAAGGAGCCGATTCAGGTGAGCCTGCTTTGTGTGCGGTGTTG TGTGTGGGTGAGCACGTGATGCTTTCTTGTATCATAGAAACAACGGAGCA CCCGGGGGGGCGTTTTGCAGTAGGAAATGTAGTTGCGGCTTGCAGCAGAG TGGTCCATGTCGTAGTTTCGAAGCGACAGAGCCGCACATAGGTAGGTTAG TGCTGGGCAGGCGCTAACAGCGGTTACCGCTCTTCTCGTTTGACTGACGT ACTTGTGGGCATGGCATAGGCATATTGCACCCCCATGTTAACTTATTGAC TTTGATTGTGCAAATCTCATGCAGATCCTCCATTTGATGTCGACATCACT CATCACTTCCAACTATATAGACTGTTGTAGAGTGGGGGGCGGTGCCAACG GTGAAGTACATGACGTCGCGTCCGATACACACTACATACTTCGTAAGTGC TCGCCGCGCCCCTGCCGCTAAGGCACATTACAAGAAAAAGACAACAAGTG CACTGAGACCTACATGGGCCACCTATGATGATAAGGTGTACGACTCGCAG ACAAGACAATACAAGAGCCATGCGCACGTCCCCGCAGTCGCGTCTCACAC CTGCCCATACACGTATCGCTATCGTACCCAACCCCTGATCTCGTTGGATA CAAGGTGGACGGCAAGGAATGGGAGGTTACTTGCGTGAGCATGGGCAACC CGCATGCCGTTGTGTTTGCGCCGGACGTGGACGCGCTGGATCTGCCTGCC TTGGGACCCCAGTTCGAGACACACCCGTCTTTCCCAGCCAAGATCAACAC CGAGTTCGTGCAGGTGGGTGCATACTGCCTACTGCCTACGTCATTCGCGG GGCTTTCAATTCCCTACCCTTTTCTTGTCTTGTGTGAGCCACGCCACTTT TTTGCTGGACATCGTTCACCCAGGTGGCTTTGGTTTTTGCAAAAGTGTTG CCCTATTGTGCTCACACTGGACAGGCTTAGCTTTCTCTACATATCCATGT ACTTGTAGCTTTTCTTCGTTTCGCATCGTATCACTCAACAATCACGGTCA AGATGCGTTTCGTTTTCCATCTGAAGCTTTTGTTGTGCCAACATCAACCA ACCATCGCCTTCTCCTCACGCTGCCCCTGACCCTACCCTACCCCAGGTCT TGACCCGAGGGCACGTGAAGATGGTGGTGTGGGAGCGAGGGTGTGGGATC ACTCAGGCATGCGGCACGGGCGCGTGTGCTCTGGTCGTCGCCGCCGTGCT CGCCGGCCTGGCGGACCGCACGTGCACGGTCACCCTGCCAGGGGGGGATT TGTTGATCGAGTGGCGAGAGTCTGATGGGAAGGTTTACATGACGGGGCCG GCAGAGCTCGCGTTCCAGGGAGATGCGGTCGTGCGGTGACTCTTGCCTTG CAGTTGGTGCATGATTTGGTGATTTAGGAGGTGTCTGTCTGTCTGACTGT CTGCCTCGCTGTACTGCAGGAGCTGCGGATCCTTCAGCATAGAAAGGGTG GCGGGGATGTTGATGAGCTAAGGATTTGGTCTTAAGGCTTTGCTTACTAG CACAGAGTGCAGAGAGAGAGAGAGAGAGAGAGAGACCTGGTGGTCGGGGG TCCAGGGTCAAAAATGCGAATACTGGACTTTTTAACATGTTGGTGTCAAG GCGAAGACATGATTGAAGCGAGCGTTTCATATCAGTTGTCTTGGTTTTTG TGGGATTGGGAGGCCTCCACTTGATCACCGCTGTTGTTCCTCCATGTTTC GGGCATCTTATGAAAGACAGAGAGTTAGATTACATTGATGAAAGCGATCG TAGTTTGTTCAGGAATGAGCGAGTGCCTCTGGCTGGATGGTTGCGCGGGG TGTGCTATGAGAGTGGACTTGGCACTCCCGTTAGACGGGTGCGTCATCTG CTGGCGTACGCACACTTGATAATTCGTGGTTGTGTTCCACCCTCGGCTGA CAAAAAAGGGAACCTCTCCAAAGATCCCAACGGAAATGTCCCAGACAAGG ATTTTGATTCTGTAGCGAAAGATTTCGCACCGCACACCACGTCTTGACGA GGGAGGCGATTTTTGTCCTGAGCTAGGTATACATATTTGTCGAACAGAAC GCTCGTCGGTTGATAAAAAAACATGATGCCGCCGGTAGAGAGTTCACGTC ATCTCGGTACAAGACGCAGACACACGTGTCTACATCAATAGGGTTGTGGG AAAACGATGTATTGTCCATTCCCACAAGGAGGCTGCATTTCGACTTGAAT ACATTGTGTCTACGATGCTGCTGTAGTCGAACGGTGGGGCGGACGTGTAG GTCAGTTGTGGACACGCATAGGTGT
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Coding sequence (CDS) from alignment at C-linearis_contig79:624547..629071-

>mRNA_C-linearis_contig79.15424.1 ID=mRNA_C-linearis_contig79.15424.1|Name=mRNA_C-linearis_contig79.15424.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1998bp|location=Sequence derived from alignment at C-linearis_contig79:624547..629071- (Chordaria linearis ClinC8C monoicous)
ATGTGGTCATCCGCGGTAGCATTAGCGCTTTTGGGCACTCACCATGCCTC
AGGCTTCGTGGTGGGCCCAGCGAACGGCGCCCTTGGCAAAGCTCGAGTAC
GGCATGGCGCGTCCTCCACGGTTGAGATGAGTGCTGCTGCTGGTGCCGCC
GCAAAGCTTGTGCCCTTTTCCAAGTACCAGGGGCTGGGCAACGACTTCAT
CCTTGTGGACAACAGAGAAGAAGAGGAGCCCATGCTCACGGCTGGAGAAT
CTGCTGACTTGTGCGACAGATGTGGTCATCCGCGGTAGCATTAGCGCTTT
TGGGCACTCACCATGCCTCAGGCTTCGTGGTGGGCCCAGCGAACGGCGCC
CTTGGCAAAGCTCGAGTACGGCATGGCGCGTCCTCCACGGTTGAGATGAG
TGCTGCTGCTGGTGCCGCCGCAAAGCTTGTGCCCTTTTCCAAGTACCAGG
GGCTGGGCAACGACTTCATCCTTGTGGACAACAGAGAAGAAGAGGAGCCC
ATGCTCACGGCTGGAGAATCTGCTGACTTGTGCGACAGGCGATACGGTAT
CGGCGGTGACGGCGTCATCTTCGCGCTGCCAGGGTCGAACGGCATGGATT
ACTCCATGCGGATCATCAACTCCGATGGCTCTGAGGCGATACGGTATCGG
CGGTGACGGCGTCATCTTCGCGCTGCCAGGGTCGAACGGCATGGATTACT
CCATGCGGATCATCAACTCCGATGGCTCTGAGCCGGAGATGTGCGGCAAC
GGAATCCGCTGCATGGCGAGGTTCCTGGCTGACCTGGAGGGAAAGAAGGA
GGCCGAGTACAAGATCCACACGCTGGCGGGGACAATCATTCCCGTGCCGG
AGATGTGCGGCAACGGAATCCGCTGCATGGCGAGGTTCCTGGCTGACCTG
GAGGGAAAGAAGGAGGCCGAGTACAAGATCCACACGCTGGCGGGGACAAT
CATTCCCGTGGCGAGAGAGGACGGGCTGGTGACCGTGGACATGGGGCCGC
CCGAGCTTAAGGGGCCCAAGGTGCCCAGCACCCTCCCCACCAATGGCGAC
GGCGTTGTGTTGAAGGAGCCGATTCAGGCGAGAGAGGACGGGCTGGTGAC
CGTGGACATGGGGCCGCCCGAGCTTAAGGGGCCCAAGGTGCCCAGCACCC
TCCCCACCAATGGCGACGGCGTTGTGTTGAAGGAGCCGATTCAGGTGGAC
GGCAAGGAATGGGAGGTTACTTGCGTGAGCATGGGCAACCCGCATGCCGT
TGTGTTTGCGCCGGACGTGGACGCGCTGGATCTGCCTGCCTTGGGACCCC
AGTTCGAGACACACCCGTCTTTCCCAGCCAAGATCAACACCGAGTTCGTG
CAGGTGGACGGCAAGGAATGGGAGGTTACTTGCGTGAGCATGGGCAACCC
GCATGCCGTTGTGTTTGCGCCGGACGTGGACGCGCTGGATCTGCCTGCCT
TGGGACCCCAGTTCGAGACACACCCGTCTTTCCCAGCCAAGATCAACACC
GAGTTCGTGCAGGTCTTGACCCGAGGGCACGTGAAGATGGTGGTGTGGGA
GCGAGGGTGTGGGATCACTCAGGCATGCGGCACGGGCGCGTGTGCTCTGG
TCGTCGCCGCCGTGCTCGCCGGCCTGGCGGACCGCACGTGCACGGTCACC
CTGCCAGGGGGGGATTTGTTGATCGAGTGGCGAGAGTCTGATGGGAAGGT
TTACATGACGGGGCCGGCAGAGCTCGCGTTCCAGGGAGATGCGGTCGTGC
GGTGAGTCTTGACCCGAGGGCACGTGAAGATGGTGGTGTGGGAGCGAGGG
TGTGGGATCACTCAGGCATGCGGCACGGGCGCGTGTGCTCTGGTCGTCGC
CGCCGTGCTCGCCGGCCTGGCGGACCGCACGTGCACGGTCACCCTGCCAG
GGGGGGATTTGTTGATCGAGTGGCGAGAGTCTGATGGGAAGGTTTACATG
ACGGGGCCGGCAGAGCTCGCGTTCCAGGGAGATGCGGTCGTGCGGTGA
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