mRNA_C-linearis_contig76.15249.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig76.15249.1 vs. uniprot
Match: A0A6H5JWY7_9PHAE (Radical SAM core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JWY7_9PHAE) HSP 1 Score: 593 bits (1530), Expect = 8.760e-209 Identity = 318/420 (75.71%), Postives = 354/420 (84.29%), Query Frame = 3
Query: 42 WTSAVMATLAVGSSESFLLAPSKAPFYGHSAA--RAASTXXXXXXXXXXXXXXXGASAAFVPTPVAPQRISGGELLSLDFDDLAKLLKGSGRAKMVWAALSQGVDPFSEAATELEFLTPKTAAVLRENVQDLPWQVTRESVSSCGTRKLLVRLEDGLDVETVVIPDLTGSRLSTVCVSSQIGCAENCQFCMTGKMGLVRNLTAGEILGQVFFARGTARKHGMPPLTNVVYMGMGEPLDNPAAVTRSLGLLTHPFAFAMAKSKISVSTVGPSPAAIRRMKGMPSRLAWSVHAATDDVRRVLVPTTVHTMIELRDAFAEVLESRPREHLFVEIVLIQGMNDSPELARALASLLRPLPRRASINLLPYNDAGHPVFRASSSEAVEEFQRVLNEEGFIATIRTARGDEESSACGQLATSAKNER 1295
W+SA ++ + V SSESFLL S A +AA +A +T A A P P AP+ + GG+LLSL+FD+L+++L GSGRAKMVW+ALS GVDPF +AA EFLT KTAAVL++ V+ LPWQV RESVSSCGTRKLLV+LEDGL+VETVVIPDL+GSR STVCVSSQIGCA+NCQFCMTGKMGLVRNLTAGEILGQVFFAR T R+HGMPPLTN VYMGMGEPLDNP AVT+SL +LTHPFAFAMAKSKISVSTVGPSPAAIRRMKGMPSRLAWSVHAATDDVRR+LVPTTVHTM ELRDAF EVL+SR REHLFVE+VLI+GMNDSPELARALASLLRPLP RA INLLPYND GHP FRAS E+VEEFQRVL +EGF+ATIRTARGDEESSACGQLAT+A +ER
Sbjct: 5 WSSAFVSAMMVSSSESFLLYSSTAGTRSTTAAAPKAGATAV--------------AHTAHPPAP-APKPVPGGDLLSLNFDELSQILGGSGRAKMVWSALSAGVDPFGDAA---EFLTDKTAAVLKDTVERLPWQVVRESVSSCGTRKLLVQLEDGLEVETVVIPDLSGSR-STVCVSSQIGCAKNCQFCMTGKMGLVRNLTAGEILGQVFFARETVREHGMPPLTNAVYMGMGEPLDNPGAVTQSLQVLTHPFAFAMAKSKISVSTVGPSPAAIRRMKGMPSRLAWSVHAATDDVRRLLVPTTVHTMAELRDAFGEVLQSRRREHLFVEVVLIKGMNDSPELARALASLLRPLPIRAGINLLPYNDTGHPFFRASPKESVEEFQRVLTQEGFVATIRTARGDEESSACGQLATTANSER 405
BLAST of mRNA_C-linearis_contig76.15249.1 vs. uniprot
Match: A0A835Z3N5_9STRA (Radical SAM core domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3N5_9STRA) HSP 1 Score: 363 bits (933), Expect = 1.520e-119 Identity = 193/337 (57.27%), Postives = 241/337 (71.51%), Query Frame = 3
Query: 279 DLAKLLKGSGRAKMVWAALSQGVDPFSEAATELEFLTPKTAAVLRE----NVQDLPWQVTRESVSSCGTRKLLVRLEDGLDVETVVIPDLTGSRLSTVCVSSQIGCAENCQFCMTGKMGLVRNLTAGEILGQVFFARGTARKHGMPPLTNVVYMGMGEPLDNPAAVTRSLGLLTHPFAFAMAKSKISVSTVGPSPAAIRRMKGMPSRLAWSVHAATDDVRRVLVPTTVHTMIELRDAFAEVLESRPREHLFVEIVLIQGMNDSPELARALASLLRPLPRRASINLLPYNDAGHPVFRASSSEAVEEFQRVLNEEGFIATIRTARGDEESSACGQLAT 1277
+LA L G GR + +W ALSQG P E + + A +RE N W+VT+ES+++CGTRKLL+R+EDG ++ETV+IP GSR +TVCVSSQ+GC C FC TG+MG +RNL+A EIL QVF+AR AR MPPL N+V+MGMGEPL+N AV +L LT FA +S ISVSTVGP+P AIR+M MP+RLAWSVHAATDDVR+ LVPTT HTM ELRDAFAEVL R +EHLFVE+ ++ G+NDSP+ A+A+ LL LP R +NLLPYND GH +R SS E +EEFQR+L G +AT+R+ RG E++ACGQLAT
Sbjct: 3 ELAHHLSGLGRGRALWKALSQGYFP-----AEADHIIG--AGGMREAKHKNWGSFGWEVTKESLANCGTRKLLLRMEDGAEIETVLIPSFDGSR-TTVCVSSQVGCNRACSFCATGRMGFIRNLSADEILAQVFYARRAARLAEMPPLDNIVFMGMGEPLNNAQAVKLALRQLTDGNMFAFGRSHISVSTVGPTPNAIRQMVDMPARLAWSVHAATDDVRKQLVPTTAHTMEELRDAFAEVLLHRGKEHLFVEVTMLDGINDSPDHAQAMVQLLSTLPGRTRVNLLPYNDIGHLSYRPSSPETIEEFQRILQAGGLVATVRSTRGAGEAAACGQLAT 331
BLAST of mRNA_C-linearis_contig76.15249.1 vs. uniprot
Match: A0A0G4FWR1_VITBC (Radical SAM core domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FWR1_VITBC) HSP 1 Score: 329 bits (844), Expect = 9.030e-105 Identity = 181/356 (50.84%), Postives = 237/356 (66.57%), Query Frame = 3
Query: 258 LLSLDFDDLAKLLKGSGRAKMVWAALSQGVDPFSEAATELEFLTPKTAAVLRENVQDLPWQVTRESVSSCGTRKLLVRLEDGLDVETVVIPDLTGSRLSTVCVSSQIGCAENCQFCMTGKMGLVRNLTAGEILGQVFFARGTARKHG--MPPLTNVVYMGMGEPLDNPAAVTRSLGLLTHPFAFAMAKSKISVSTVGPSPAAIRRMKGMPSRLAWSVHAATDDVRRVLVPTTVHTMIELRDAFAEVLESRPREH------------LFVEIVLIQGMNDSPELARALASLLRPLPRRASINLLPYNDAGHPVFRASSSEAVEEFQRVLNEEGFIATIRTARGDEESSACGQLATSA 1283
LLSL ++LA + G+GRA+ +W AL +G P + + L+ + L E Q LP++V E+VS+CGT KLLVRL DG VETV+IP G ST+CVSSQIGCA C+FC TG+MGL+RNL A EIL QVFFA R+ PP+ N V+MGMGEPL+NP AV R++ +T PFAF + +S I+VSTVGPSPA+IR ++ +P +AWSVHAA D+VRR+LVPTTVH M +LRDAFA++L +R +H + VE L+ G+NDS E A AL L+R LP +NLLPYND G P +R S V + + E G + ++R ARGDE+ +ACGQLAT+A
Sbjct: 87 LLSLSVEELASSVGGTGRARRIWEALRKGQLPIDIDDSTEKPLSHRALTRLLEATQLLPYEVINETVSACGTVKLLVRLRDGHGVETVIIPSEKGH--STLCVSSQIGCARACRFCKTGQMGLMRNLGADEILAQVFFAHRWVRESDGRTPPIRNAVFMGMGEPLNNPRAVRRAIQTMTDPFAFGLGRSHITVSTVGPSPASIRLLEDIPVHIAWSVHAARDNVRRLLVPTTVHPMTDLRDAFADMLIARSNKHQGPGRFPKRYLNIMVECTLLDGLNDSREDAEALVELVRGLPGEPKVNLLPYNDIGVPGYRRSPEAKVAAYLECVREGGVMCSVRRARGDEDMAACGQLATTA 440
BLAST of mRNA_C-linearis_contig76.15249.1 vs. uniprot
Match: A0A7S4ESN9_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4ESN9_CHRCT) HSP 1 Score: 325 bits (833), Expect = 8.940e-104 Identity = 180/348 (51.72%), Postives = 229/348 (65.80%), Query Frame = 3
Query: 258 LLSLDFDDLAKLLKGSGRAKMVWAALSQGVDPFSEAATELEFLTPKTAAVLRENVQDLPWQVTRESVSSCGTRKLLVRLEDGLDVETVVIPDLTGSRLSTVCVSSQIGCAENCQFCMTGKMGLVRNLTAGEILGQVFFARGTARKHGMPPLTNVVYMGMGEPLDNPAAVTRSLGLLTHPFAFAMAKSKISVSTVGPSPAAIRRMKGMPSRLAWSVHAATDDVRRVLVPTTVHTMIELRDAFAEVLESRPREHLFVEIVLIQGMNDSPELARALASLLRPLPRRASINLLPYN-----DAGHPVFRASSSEAVEEFQRVLNEEGFIATIRTARGDEESSACGQLATSAK 1286
+L++ + A LL G+GRA+ +W L QGVDPF E A TP+ A L ++ + +S SSCGTRKLL+RLEDGL VE VVIP G STVCVSSQ+GC C FC TG MGL R+LT EIL Q+F A +++GMPP+ N+V+MGMGEPLDN +V +L ++ PF FA++K + VSTVGPSP +IR + + +RLAWSVHAA D +R++LVPTT H+M ELRDAFA+VL R L VEI LI G+ND A AL +LLRPLP + +NL+PYN A F+ SSS +V FQ+ L E I T+R RGD ES+ACGQLA S +
Sbjct: 50 VLAVSPHEAATLLGGAGRARAIWEQLRQGVDPFDEDALPK---TPRARARLLSSLSPPAAETIAQSDSSCGTRKLLLRLEDGLSVECVVIPSPNG-LFSTVCVSSQVGCMRGCAFCATGAMGLTRSLTTHEILEQLFAALVACKRNGMPPIRNIVFMGMGEPLDNLDSVKSALEVMQDPFGFALSKKHLCVSTVGPSPQSIRALTSVGARLAWSVHAAEDSLRKLLVPTTAHSMAELRDAFAQVLAERNDRGLMVEIALIDGVNDGLADAEALHALLRPLPGKTRVNLIPYNVNEGLGAVGRQFKPSSSSSVSRFQKYLIERELICTVRETRGDGESAACGQLAVSVR 393
BLAST of mRNA_C-linearis_contig76.15249.1 vs. uniprot
Match: A0A7S2W4X2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W4X2_9STRA) HSP 1 Score: 308 bits (789), Expect = 5.510e-97 Identity = 193/401 (48.13%), Postives = 243/401 (60.60%), Query Frame = 3
Query: 201 ASAAFVPTPVAPQRIS--GGE--LLSLDFDDLAKLLKGSGRAKMVWAALSQGVDPFSEAATELEFLTPKTAAVLRENVQDLPWQVTRES-----------VSSCGTRKLLVRLEDGLDVETVVIPDLTGSRLSTVCVSSQIGCAENCQFCMTGKMGLVRNLTAGEILGQVFFARGTARKHGMPPLTNVVYMGMGEPLDNPAAVTRSLGLLTHPFAFAMAKSKISVSTVGPSPAAIRRMKGMPSRLAWSVHAATDDVRRVLVPTTVHTMIELRDAFAEVLESRPREHLFVEIVLIQGMNDSPELARALASLLRPLPRRASINLLPYND-----------AGHPVFRASSSEAVEEFQRVLNEEGFIATIRTARGDEESSACGQLATSAKNERHRK--RAVPP 1319
A A V P P +S G E LL+ LA +L RA+ VW +++G+DPF + L + A +LRE P + R V++ GT K+LV L+DGL ETV+IP T SR +T+CVSSQ+GCA C FC TG MGL+R+L A EILGQ+F A++ +PPLTNVV+MGMGEP DN V L T F + S ISVSTVGPSP AI ++ +P+RLAWSVHAA DDVRRVLVPTT H+M+ELRDAFA VL R LFVE+ L++G+NDSP A ALA LLRPLP + +NLLPYN H +FR S E V+ FQ VL EGF+ T+R+ RG + +SACGQLA A + R+ + VPP
Sbjct: 15 ALLAAVLAPGRPLAVSSVGSEVRLLATPPSALAPVLASQSRAQRVWKTIAEGLDPFGMDMPQE--LGREAAKLLREA---FPLEAARGELCTGVDAAVGDVAADGTTKILVHLQDGLMAETVLIP--TDSR-TTICVSSQVGCARACAFCSTGAMGLIRSLDAHEILGQLFAGMQEAQRRELPPLTNVVFMGMGEPADNLEQV--HLAARTMVEGFRLGNSHISVSTVGPSPEAIEALESLPTRLAWSVHAAEDDVRRVLVPTTRHSMVELRDAFARVLARRRDRGLFVEVALVEGLNDSPHHALALAELLRPLPGKTRVNLLPYNPFAPEASDLPRAQAHALFRTPSPETVKTFQDVLYSEGFVCTVRSTRGADSASACGQLANRASLSQSRRPSKEVPP 405
BLAST of mRNA_C-linearis_contig76.15249.1 vs. uniprot
Match: A0A7S0VC70_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VC70_9CRYP) HSP 1 Score: 305 bits (781), Expect = 4.850e-95 Identity = 169/348 (48.56%), Postives = 219/348 (62.93%), Query Frame = 3
Query: 270 DFDDLAKLLKGSGRAKMVWAALSQGVDPFSEAATELEFLTPKTAAVLRENVQDLPWQVTRESVSSCGTRKLLVRLEDGLDVETVVIPDLTGSRL-------STVCVSSQIGCAENCQFCMTGKMGLVRNLTAGEILGQVFFARGTARKHGMPPLTNVVYMGMGEPLDNPAAVTRSLGLLTHPFAFAMAKSKISVSTVGPSPAAIRRMKGMPSRLAWSVHAATDDVRRVLVPTTVHTMIELRDAFAEVLESRPREH--LFVEIVLIQGMNDSPELARALASLLRPLPRRAS---INLLPYNDAGHPVFRASSSEAVEEFQRVLNEEGFIATIRTARGDEESSACGQLAT 1277
D +L +LL G+G+AKMVW +L GV P+ E +T K A+L + Q +P V+ ESV+ GT KLLV L+DGL VE+VVIP+ +T+CVSSQ+GC C FC TGKMG +R LT+ EIL QVF R+ G+PPL N+V+MGMGEPL+NP V R+ +LT F A+S+++VSTVGPSPAAIR +P+ LAWSVHAA D++RR LVPTT HTM ELRD F VL R R+ V + LI G+ND E A AL LLRP+ ++L+PYND G + + + V FQR L + GF +R RGD+ ++ACGQLAT
Sbjct: 113 DVAELGRLLGGTGKAKMVWESLRDGVSPWENR----EVVTDKARALLERSFQGIPG-VSLESVAGDGTTKLLVDLDDGLQVESVVIPNKGKPSAQGVVEPRTTLCVSSQVGCNRACDFCATGKMGFIRQLTSHEILSQVFHGLRVVRERGLPPLHNIVFMGMGEPLNNPLHVMRATDILTRDKCFGFARSRVTVSTVGPSPAAIRAAGDLPAMLAWSVHAADDELRRRLVPTTAHTMEELRDTFKSVLSKRSRQMSTFMVAVTLIDGLNDGEEQADALVELLRPIQEVVKGLVVDLIPYNDIGEAAYERAGKDNVGAFQRRLRDAGFACFVRVTRGDDGNAACGQLAT 455
BLAST of mRNA_C-linearis_contig76.15249.1 vs. uniprot
Match: A0A4D9DBV9_9STRA (Radical SAM core domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DBV9_9STRA) HSP 1 Score: 302 bits (773), Expect = 1.500e-94 Identity = 174/366 (47.54%), Postives = 226/366 (61.75%), Query Frame = 3
Query: 258 LLSLDFDDLAKLLKGSGRAKMVWAALSQGVDPFSEAATELEF---LTPKTAAVLRENVQDLPWQVTRESVSSCGTRKLLVRLEDGLDVETVVIPDLTGSRL--------------------STVCVSSQIGCAENCQFCMTGKMGLVRNLTAGEILGQVFFARGTARKHGMPPLTNVVYMGMGEPLDNPAAVTRSLGLLTHPFAFAMAKSKISVSTVGPSPAAIRRMKGMPS-RLAWSVHAATDDVRRVLVPTTVHTMIELRDAFAEVLESRPREHLFVEIVLIQGMNDSPELARALASLLRPLPRRA-SINLLPYNDAGHPVFRASSSEAVEEFQRVLNEEG-FIATIRTARGDEESSACGQLAT 1277
+L L D L ++L+G GRA+MVW A+ +G+DP F +T +T A+L+E V W + + + S+CGT KLL+RL DGL VETVVIP G R STVCVSSQ+GCA+ C FC+TG MG VR+L+ EIL QV A R G+P L NVV+MGMGEPL+N AV +L +T P AFA++ S I++STV PSP +R MP RLAWSVH A D +RR LVPTT +M+ELR+AF EV+ R ++F+E+ LI+G+NDS + A AL LLRP R A +NL+PYND G + S S + FQ + G ++ RT RG E+SSACGQLAT
Sbjct: 29 ILKLGTDGLERVLEGKGRARMVWRAVREGLDPHETDPASPMFDSRITSRTRAILQERVLGPQWTLVQRTSSTCGTLKLLIRLHDGLMVETVVIPARLGPRSNGLARGMSREAEDSLALASRSTVCVSSQVGCAQACAFCLTGTMGFVRHLSMDEILMQVQLALQKVRAEGLPGLRNVVFMGMGEPLNNHRAVRHALACMTDPHAFALSPSFITLSTVAPSPGHVRHFLDMPKIRLAWSVHGAADGLRRTLVPTTSSSMVELREAFREVMAQRGDTYIFIEVTLIEGVNDSLDDAEALVELLRPFGRTAVKVNLIPYNDTGVNGWMPSPSGNILAFQTYVRAHGGWLTFARTPRGREDSSACGQLAT 394
BLAST of mRNA_C-linearis_contig76.15249.1 vs. uniprot
Match: W7TTG9_9STRA (Radical SAM core domain-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TTG9_9STRA) HSP 1 Score: 302 bits (773), Expect = 3.360e-93 Identity = 176/366 (48.09%), Postives = 225/366 (61.48%), Query Frame = 3
Query: 258 LLSLDFDDLAKLLKGSGRAKMVWAALSQGVDPFSEAATELEF---LTPKTAAVLRENVQDLPWQVTRESVSSCGTRKLLVRLEDGLDVETVVIPDLTGSRL--------------------STVCVSSQIGCAENCQFCMTGKMGLVRNLTAGEILGQVFFARGTARKHGMPPLTNVVYMGMGEPLDNPAAVTRSLGLLTHPFAFAMAKSKISVSTVGPSPAAIRRMKGMPS-RLAWSVHAATDDVRRVLVPTTVHTMIELRDAFAEVLESRPREHLFVEIVLIQGMNDSPELARALASLLRPLPRRA-SINLLPYNDAGHPVFRASSSEAVEEFQR-VLNEEGFIATIRTARGDEESSACGQLAT 1277
+L L D L ++L+G GRA+MVW A+ +G+DP F +T +T A+L+E V W + + + S+CGT KLLVRL DGL VETVVIP G R STVCVSSQ+GCA+ C FC+TG MG VR+L+ EIL QV A R G+P L NVV+MGMGEPL+N AV +L +T P AFA++ S I++STV PSP +R MP RLAWSVH A D +RR LVPTT +M+ELR+AF EV+ R ++F+E+ LI+G+NDS + A AL LLRP R A +NL+PYND G + S + FQ V G++ RT RG EESSACGQLAT
Sbjct: 135 ILKLGTDGLERVLEGKGRARMVWRAVREGLDPHETDPASPMFDSRITSRTRAILQERVLGPQWTLVQRTSSTCGTLKLLVRLHDGLMVETVVIPARLGPRSNGLARGMSGEAEDSLALASRSTVCVSSQVGCAQACAFCLTGTMGFVRHLSIDEILMQVQLALQKVRAEGLPGLRNVVFMGMGEPLNNHRAVRHALACMTDPHAFALSPSFITLSTVAPSPGHVRHFLDMPKIRLAWSVHGAADGLRRTLVPTTSSSMVELREAFREVMAQRGDTYIFIEVTLIEGVNDSLDDAEALVELLRPFGRTAVKVNLIPYNDTGVNGWMPSPPGNILAFQTYVRTHGGWLTFARTPRGREESSACGQLAT 500
BLAST of mRNA_C-linearis_contig76.15249.1 vs. uniprot
Match: A0A0G4G3K1_9ALVE (Radical SAM core domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4G3K1_9ALVE) HSP 1 Score: 294 bits (753), Expect = 2.470e-90 Identity = 167/365 (45.75%), Postives = 228/365 (62.47%), Query Frame = 3
Query: 255 ELLSLDFDDLAKLLKGSGRAKMVWAALSQGVDPFS---------EAATELEFLTPKTAAVLRENVQDLPWQVTR--ESVSSCGTRKLLVRLEDGLDVETVVIPDLTGSRLSTVCVSSQIGCAENCQFCMTGKMGLVRNLTAGEILGQVFFARGTARKHGMPPLTNVVYMGMGEPLDNPAAVTRSLGLLTHPFAFAMAKSKISVSTVGPSPAAIRRMKGMPSRLAWSVHAATDDVRRVLVPTTVHTMIELRDAFAEVLESRPR-----EHLFVEIVLIQGMNDSPELARALASLLRPLPRRASINLLPYNDAGHPVFRASSSEAVEEFQRVLNEEGFIATIRTARGDEESSACGQLATSAKNERHR 1301
ELL+ F +L++L G+ RA+M+W + GV P + F++ +T L + + + +T+ E VS CGTRKLL DGL VETV+IP +TVCVSSQ+GC+ C FC TG+MGL+RNL++GEIL Q+F A+ R+ GMP L VV+MGMGEP++NP V ++ L F +K K+++STVG SPA+IR++ P LAWS+HAA+D+ R++LVPTT H + EL AF EV+E+R L VE+ L+ G+ND E AR LAS+L P+ R +NL+PYND G R SS E+V FQR L EG A++R RGDEES+ACGQLAT + + R
Sbjct: 69 ELLNSSFVNLSELCGGTTRARMIWDCVRDGVQPLGLQGDGESHGDGTVLPSFVSRETRQKLGLHFGGMDFSLTQRGEKVSGCGTRKLLTEFRDGLQVETVLIPS---DDKTTVCVSSQVGCSRGCIFCSTGRMGLLRNLSSGEILCQIFQAQKRRRETGMPRLERVVFMGMGEPMNNPKNVREAIEALVDEKRFKFSKRKVTLSTVGVSPASIRQLVDFPCVLAWSLHAASDEKRQLLVPTTRHGVSELSGAFLEVMEARKHLKGSLRLLMVEVALMAGLNDGEEDARLLASVLSPVKDRVLVNLIPYNDTGAEGLRRSSEESVRRFQRALWAEGLRASVRVTRGDEESAACGQLATGSGGSKKR 430
BLAST of mRNA_C-linearis_contig76.15249.1 vs. uniprot
Match: A0A2E6VQA8_9DELT (Radical SAM core domain-containing protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A2E6VQA8_9DELT) HSP 1 Score: 288 bits (738), Expect = 3.310e-90 Identity = 155/341 (45.45%), Postives = 220/341 (64.52%), Query Frame = 3
Query: 258 LLSLDFDDLAKLLKGSGRAKMVWAALSQGVDPFSEAATELEFLTPKTAAVLRENVQDLPWQVTRESVSSCGTRKLLVRLEDGLDVETVVIPDLTGSRLSTVCVSSQIGCAENCQFCMTGKMGLVRNLTAGEILGQVFFARGTARK-HGMPPLTNVVYMGMGEPLDNPAAVTRSLGLLTHPFAFAMAKSKISVSTVGPSPAAIRRMKGMPSRLAWSVHAATDDVRRVLVPTTVHTMIELRDAFAEVLESRPREHLFVEIVLIQGMNDSPELARALASLLRPLPRRASINLLPYNDAGHPVFRASSSEAVEEFQRVLNEEGFIATIRTARGDEESSACGQLAT 1277
+LS FD LA+ L GSGRAK +W+ L G DPF L K L +N+ +VT S CGT KL + L+D L+VETV+IP + G +TVC+SSQ+GCA C FC TG+M L+RNL A EIL QV+ AR ++ +PP N+V+MGMGEPL+N V +++ + HP FA+ +I++STVGPSP+ I+++K +P+R+AWS+HAA D R+ LVPTT H++ L DAFA+VL R +E LF+E+ LI +ND E A L + L+ LP + +NL+P N F + E ++ F+ +L+E G+ ++R +RGDEE++ACGQL T
Sbjct: 6 ILSCSFDALAQTLAGSGRAKAIWSLLRNGQDPFQAP------LGKKLTRALNQNLTAFDERVTTRHQSPCGTLKLGIALQDKLEVETVLIP-MNGR--TTVCISSQVGCARGCTFCSTGQMNLIRNLKAHEILFQVYAARRCIQESQDLPPFRNIVFMGMGEPLNNFEEVKKAITQMVHPLTFAIGAKRITLSTVGPSPSLIQKLKTLPTRIAWSIHAAEDTKRQRLVPTTKHSIAALTDAFADVLH-RKKEGLFIELTLIDNVNDRDEDAHHLVTCLKRLPGESRVNLIPVNPTPGNSFAPPTPERIQSFRAILHEAGYFCSVRPSRGDEEAAACGQLIT 336 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig76.15249.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig76.15249.1 >prot_C-linearis_contig76.15249.1 ID=prot_C-linearis_contig76.15249.1|Name=mRNA_C-linearis_contig76.15249.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=437bp MVPLTTRIRWTSAVMATLAVGSSESFLLAPSKAPFYGHSAARAASTAHAAback to top mRNA from alignment at C-linearis_contig76:951569..955130- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig76.15249.1 ID=mRNA_C-linearis_contig76.15249.1|Name=mRNA_C-linearis_contig76.15249.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3562bp|location=Sequence derived from alignment at C-linearis_contig76:951569..955130- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig76:951569..955130- >mRNA_C-linearis_contig76.15249.1 ID=mRNA_C-linearis_contig76.15249.1|Name=mRNA_C-linearis_contig76.15249.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2622bp|location=Sequence derived from alignment at C-linearis_contig76:951569..955130- (Chordaria linearis ClinC8C monoicous)back to top |