prot_C-linearis_contig76.15166.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig76.15166.1
Unique Nameprot_C-linearis_contig76.15166.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length193
Homology
[Close]
BLAST of mRNA_C-linearis_contig76.15166.1 vs. uniprot
Match: D7G2C8_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2C8_ECTSI)

HSP 1 Score: 320 bits (820), Expect = 1.080e-109
Identity = 167/192 (86.98%), Postives = 177/192 (92.19%), Query Frame = 0 
Query:    1 MPSTLSKLYDAAASGSVERTVALLSHGSVDIDGGYGDAGRTPLMAASTMGYVRIVRVLLRLGARVSVADNDGATALHLSIVNIHLAVSKALIKAGADVQALGVDGTPLHVAAAKGFHEGMVVLIHAGANVDAVHAISWCWPSAFEKSTPIVRMLPVLKRRATKPRVVLAALSRYNNKQDGPFLGYSPDKNGE 192
            MPSTLSKLYDAAASGSVERTVA+LS GSVDIDGGYGD GRTPLMAASTMGY+R+VRVLLR GARVSVADNDGATALHLSIV  HLAVS+AL+KAGA V+A GVDGTPLHVAAAKGFH+GMV+LIH    VDAVHAISWCWPSA EKS PIVR+LP LKRRATKP V+LAALSRYNNKQDGPFLGYSPDKNGE
Sbjct:    1 MPSTLSKLYDAAASGSVERTVAVLSQGSVDIDGGYGDVGRTPLMAASTMGYLRVVRVLLRPGARVSVADNDGATALHLSIVIKHLAVSRALVKAGAGVEARGVDGTPLHVAAAKGFHKGMVMLIH----VDAVHAISWCWPSALEKSKPIVRVLPGLKRRATKPCVLLAALSRYNNKQDGPFLGYSPDKNGE 188
[Close]
BLAST of mRNA_C-linearis_contig76.15166.1 vs. uniprot
Match: D7G449_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G449_ECTSI)

HSP 1 Score: 218 bits (554), Expect = 3.200e-69
Identity = 114/127 (89.76%), Postives = 122/127 (96.06%), Query Frame = 0 
Query:    1 MPSTLSKLYDAAASGSVERTVALLSHGSVDIDGGYGDAGRTPLMAASTMGYVRIVRVLLRLGARVSVADNDGATALHLSIVNIHLAVSKALIKAGADVQALGVDGTPLHVAAAKGFHEGMVVLIHAG 127
            MPSTLSKLYDAAASGSVERTVA+LS GSV+IDGGYGD GRTPLMAASTMGY+R+VRVLLRLGARVSVADNDGATALHLSIVN HLAVSKAL+KAGA V+A GVDGTPLHVAAAKGFH+GMV+LIHAG
Sbjct:    1 MPSTLSKLYDAAASGSVERTVAVLSQGSVNIDGGYGDVGRTPLMAASTMGYLRVVRVLLRLGARVSVADNDGATALHLSIVNKHLAVSKALVKAGAGVEARGVDGTPLHVAAAKGFHKGMVMLIHAG 127
[Close]
BLAST of mRNA_C-linearis_contig76.15166.1 vs. uniprot
Match: A0A6H5JL58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL58_9PHAE)

HSP 1 Score: 221 bits (562), Expect = 5.220e-64
Identity = 116/132 (87.88%), Postives = 124/132 (93.94%), Query Frame = 0 
Query:    1 MPSTLSKLYDAAASGSVERTVALLSHGSVDIDGGYGDAGRTPLMAASTMGYVRIVRVLLRLGARVSVADNDGATALHLSIVNIHLAVSKALIKAGADVQALGVDGTPLHVAAAKGFHEGMVVLIHAGANVDA 132
            MPSTLSKLY A ASGSVERTVA+LS GSVDIDGGYGD GRTPLMAA TMGY+R+VRVLLRLGARVSVADNDGATALHLSIVN HLAVSKAL+KAGA V+A GVDGTPLHVAAAKGFH+GMV+LIHAGANVD+
Sbjct:    1 MPSTLSKLYHAPASGSVERTVAVLSQGSVDIDGGYGDVGRTPLMAAFTMGYLRVVRVLLRLGARVSVADNDGATALHLSIVNKHLAVSKALVKAGAGVEARGVDGTPLHVAAAKGFHKGMVMLIHAGANVDS 132
[Close]
BLAST of mRNA_C-linearis_contig76.15166.1 vs. uniprot
Match: A0A6H5JNS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS0_9PHAE)

HSP 1 Score: 161 bits (408), Expect = 1.220e-44
Identity = 129/373 (34.58%), Postives = 136/373 (36.46%), Query Frame = 0 
Query:   38 AGRTPLMAASTMGYVRIVRVLLRLGARVSVADNDGATALHLSIVNIHLAVSKALIKAGADV-------QALGVDGTPLHVAAAKGFHEGMVVLIHAGAN--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VDAVHAISWCWPSAFEKSTPIVRMLPVLKRRATKPRVVLAALSRYNNKQDGPFLGYSPDKNG 191
            AG      ASTMGY+R+VRVLLRLGARVS ADNDGATALHLSIVN HLAVSKAL+KAGAD+       QALGV  TPLHVAAAKGFH+GMV+LIHAG                                                                                                                                                                                                                      VDAVHA SWCWPSA EKSTPIVRMLP LKRRATKPRV LA LSRYNNKQDGPFLGY+P KNG
Sbjct:   30 AGPRLWWVASTMGYLRVVRVLLRLGARVSAADNDGATALHLSIVNKHLAVSKALVKAGADLEARIDHHQALGVGCTPLHVAAAKGFHKGMVMLIHAGVKGFVGAKANPILAAYDGESLPLDVAAENGQLGVVRELEQRFGIDGCSCDGGAQALVEAASQNQVDIVTFLFDNGVVDAEGIALCAAVEGRREECIELLLRTQGCNANAIARAYANMTHDTTLPMYSNQLFPDTPLVSAFELGGFYSPRITRLLLGAGADVASRVRYEGIEGDCVMHDTPLTIAESTLPLWETYGETSEDVEFGLKGVIRLLKQVDAVHATSWCWPSALEKSTPIVRMLPGLKRRATKPRVALAPLSRYNNKQDGPFLGYTPSKNG 402
[Close]
BLAST of mRNA_C-linearis_contig76.15166.1 vs. uniprot
Match: A0A6H5K1W5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1W5_9PHAE)

HSP 1 Score: 158 bits (400), Expect = 1.710e-41
Identity = 90/120 (75.00%), Postives = 96/120 (80.00%), Query Frame = 0 
Query:   13 ASGSVERTVALLSHGSVDIDGGYGDAGRTPLMAASTMGYVRIVRVLLRLGARVSVADNDGATALHLSIVNIHLAVSKALIKAGADVQALGVDGTPLHVAAAKGFHEGMVVLIHAGANVDA 132
            A GSVERTVALLS GSVDIDG YGDAGRTPLM ASTMGY+R+ RVLLRLGA VSVADNDGATALHLS+ N HLAVSKALIKAGA+V+A  VDG              MVVLIHAGANVD+
Sbjct:    5 ARGSVERTVALLSRGSVDIDGSYGDAGRTPLMVASTMGYLRVERVLLRLGAGVSVADNDGATALHLSVFNQHLAVSKALIKAGAEVEARCVDG--------------MVVLIHAGANVDS 110
[Close]
BLAST of mRNA_C-linearis_contig76.15166.1 vs. uniprot
Match: A0A6H5KSL5_9PHAE (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6H5KSL5_9PHAE)

HSP 1 Score: 127 bits (320), Expect = 1.310e-31
Identity = 83/143 (58.04%), Postives = 101/143 (70.63%), Query Frame = 0 
Query:    1 MPSTLSK-LYDAAASGSVERTVALLSHGSVDIDGGYGDAGRTPLMAASTMGYVRIVRVLLRLGARVSVADNDGATALHLSIVNIHLAVSKALIKAGADVQALG---------VDG-TPLHVAAAKGFHEGMVVLIHAGANVDA 132
            +PST S  LY AA+SGSVERT+ LLS G  +ID    + G T LM A+  GY+RIVRVLLR GA VSV+ +DG TALH +I   +LAV+KALIKAGA+V+A           V G TPLH+AA +GF EGMV LI+AGANVD+
Sbjct:   13 VPSTTSDTLYCAASSGSVERTLDLLSGGFTEIDRRCDEHGVTALMCAANKGYLRIVRVLLRFGADVSVSTDDGHTALHFAIGGRNLAVTKALIKAGAEVEAKADLVRMESEVVQGQTPLHLAAGEGFCEGMVALINAGANVDS 155
[Close]
BLAST of mRNA_C-linearis_contig76.15166.1 vs. uniprot
Match: D8LH66_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH66_ECTSI)

HSP 1 Score: 114 bits (285), Expect = 2.250e-28
Identity = 72/125 (57.60%), Postives = 88/125 (70.40%), Query Frame = 0 
Query:    1 MPSTLSKLYDAAASGSVERTVALLSHGSVDIDGGYGDAGRTPLMAASTMGYVRIVRVLLRLGARVSVADNDGATALHLSIVNIHLAVSKALIKAGADVQAL-GVDGTPLHVAAAKGFHEGMVVLI 124
            MPSTLSK     ASGS++ T+A     +  ID G GD  +TPLM AS +G  R+VR LLR GA VSVAD+DG TALH S+ + HLAVSK LI+AGAD++A  G   TPLHVAA KGF +GM +L+
Sbjct:    1 MPSTLSK-----ASGSIDPTIA-----TTGIDRGCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGCTALHHSVYHNHLAVSKDLIEAGADLEARHGGKDTPLHVAATKGFCQGMKLLM 115
[Close]
BLAST of mRNA_C-linearis_contig76.15166.1 vs. uniprot
Match: D8LP44_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP44_ECTSI)

HSP 1 Score: 88.6 bits (218), Expect = 3.160e-17
Identity = 64/142 (45.07%), Postives = 78/142 (54.93%), Query Frame = 0 
Query:    1 MPSTLSKLYDAAASGSVERTVALLSHGSVDIDGGYGDAGRTPLMAASTMGYVRIVRVLLRLGARVSVADNDGATALHLSIVNIHLAVSKALIKAG------ADV----QALGVDGTPLHVAAAKGFHEGMVVLIHAGANVDA 132
            MPST S LY+AA +GSVERT+ LLS G  +ID    + G T LM A+  GY+RIVRVLLR GA VSV+ +DG                             AD     Q +    TPLH+A  +GF +GMV LI AGANVD+
Sbjct:    1 MPSTTSTLYNAAWTGSVERTLDLLSDGFTEIDRRCEENGVTALMCAANKGYLRIVRVLLRFGADVSVSTDDGHXXXXXXXXXXXXXXXXXXXXXXXXXXXKADFLHPDQEVVQGQTPLHLATGEGFCDGMVALIDAGANVDS 142
[Close]
BLAST of mRNA_C-linearis_contig76.15166.1 vs. uniprot
Match: A0A6H5L5L0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5L0_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 6.770e-16
Identity = 50/108 (46.30%), Postives = 64/108 (59.26%), Query Frame = 0 
Query:  102 GVDGTPLHVA-------AAKGFHEGMVV----LIHAGANVDAVHAISWCWP---------SAFEKSTPIVRMLPVLKRRATKPRVVLAALSRYNNKQDGPFLGYSPDK 189
            G  GTPL +A       ++   H  MV     +I      +AVH++SW WP         ++ +K T I RM+P+LKRRA KPRV+LAALSRYN KQDG FLGY P+K
Sbjct:  374 GFIGTPLDLATSYFRRFSSMSVHREMVPELKGVIRLLRQEEAVHSVSWTWPIDNGRSVERASRKKPTSIARMVPLLKRRAAKPRVLLAALSRYNEKQDGAFLGYLPEK 481
[Close]
BLAST of mRNA_C-linearis_contig76.15166.1 vs. uniprot
Match: A0A6H5JHQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHQ8_9PHAE)

HSP 1 Score: 80.9 bits (198), Expect = 1.950e-14
Identity = 39/63 (61.90%), Postives = 47/63 (74.60%), Query Frame = 0 
Query:  131 DAVHAISWCWP---------SAFEKSTPIVRMLPVLKRRATKPRVVLAALSRYNNKQDGPFLG 184
            +AVHA+SW WP         ++ +KST I RMLP+LKRRA KPRV+LAA+SRYNNK DG FLG
Sbjct:  360 EAVHAVSWTWPIDTGRSVERASRKKSTSIARMLPLLKRRAAKPRVLLAAMSRYNNKHDGAFLG 422
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig76.15166.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
D7G2C8_ECTSI1.080e-10986.98EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D7G449_ECTSI3.200e-6989.76EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5JL58_9PHAE5.220e-6487.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JNS0_9PHAE1.220e-4434.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K1W5_9PHAE1.710e-4175.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSL5_9PHAE1.310e-3158.04Uncharacterized protein n=2 Tax=root TaxID=1 RepID... [more]
D8LH66_ECTSI2.250e-2857.60EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D8LP44_ECTSI3.160e-1745.07EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5L5L0_9PHAE6.770e-1646.30Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHQ8_9PHAE1.950e-1461.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 103..132
e-value: 0.54
score: 19.3
coord: 38..67
e-value: 0.067
score: 22.3
coord: 71..100
e-value: 0.0091
score: 25.2
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 106..133
e-value: 0.023
score: 15.2
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 103..135
score: 10.125
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 71..103
score: 10.446
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 38..70
score: 12.689
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 2..161
e-value: 3.5E-29
score: 103.7
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 7..134
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 8..99
e-value: 3.7E-11
score: 43.5
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 3..135
score: 28.884
NoneNo IPR availablePANTHERPTHR24180:SF1526S PROTEASOME REGULATORY SUBUNIT P28-RELATEDcoord: 5..140
NoneNo IPR availablePANTHERPTHR24180FAMILY NOT NAMEDcoord: 5..140

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig76contigC-linearis_contig76:241284..242669 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig76.15166.1mRNA_C-linearis_contig76.15166.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig76 241284..242669 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig76.15166.1 ID=prot_C-linearis_contig76.15166.1|Name=mRNA_C-linearis_contig76.15166.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=193bp
MPSTLSKLYDAAASGSVERTVALLSHGSVDIDGGYGDAGRTPLMAASTMG
YVRIVRVLLRLGARVSVADNDGATALHLSIVNIHLAVSKALIKAGADVQA
LGVDGTPLHVAAAKGFHEGMVVLIHAGANVDAVHAISWCWPSAFEKSTPI
VRMLPVLKRRATKPRVVLAALSRYNNKQDGPFLGYSPDKNGE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom