prot_C-linearis_contig112.1513.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig112.1513.1
Unique Nameprot_C-linearis_contig112.1513.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length493
Homology
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BLAST of mRNA_C-linearis_contig112.1513.1 vs. uniprot
Match: A0A6H5KW50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW50_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 3.440e-10
Identity = 32/43 (74.42%), Postives = 37/43 (86.05%), Query Frame = 0 
Query:    1 MVVCKARSCAKVGSFGIAGTRTAEFCATHASEGMINVISKRCD 43
            MV CK   C+KVGSFG+ GTRTAE+CATHA +GM+NVISKRCD
Sbjct:    1 MVTCKQHGCSKVGSFGVQGTRTAEYCATHAKDGMLNVISKRCD 43
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BLAST of mRNA_C-linearis_contig112.1513.1 vs. uniprot
Match: D8LNJ8_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNJ8_ECTSI)

HSP 1 Score: 59.3 bits (142), Expect = 6.420e-6
Identity = 82/234 (35.04%), Postives = 103/234 (44.02%), Query Frame = 0 
Query:  228 CSRKRARD---ARLALEGGGSSASRAKLDPQAAAAGSGVKKELRKNGGGGEAMFDRKMPVPNSSSADAAAQYPLSFAGSEQG--FGGD----GPTGFERQRAEPTSFLDGPQSLIRPGMIIGATPYSHFAAPPSASSSSAGAGAKQGQTFAGGPRAQADVGSEGLGGNTFERQASTEPRPGHAVSAGNGXXXXAGA---RMSSVPPIPAINSAEDAAVAELVMGLKNRRSSMDE 449
            CSRKRARD   ARLA+E   S+  R KLD Q  A G     +   NGG    ++         S AD++  Y  +F GS  G   GGD    G T F+RQ     SFL     +       G   +      P  +   AG+   QG T               LGGN FE           ++S+G+      GA    +++   IP  NSAEDAAVAELVMGLKNRR+   E
Sbjct:  119 CSRKRARDLRDARLAVEAAASA--RPKLDLQQQAGG-----DSDVNGG----VY---------SVADSSTNYSRTFCGSGTGGRMGGDNGSGGGTPFQRQGPGGISFLSDTHPVAG-----GTGSFDRHLYSPMVTHRFAGSMIGQGTTAX-------XXXXXXLGGNMFEPHGGAGATTS-SISSGDPHAGPGGALQGALAAATAIPPANSAEDAAVAELVMGLKNRRTQDGE 319
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig112.1513.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KW50_9PHAE3.440e-1074.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNJ8_ECTSI6.420e-635.04EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig112contigC-linearis_contig112:118397..121917 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig112.1513.1mRNA_C-linearis_contig112.1513.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig112 117060..122032 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig112.1513.1 ID=prot_C-linearis_contig112.1513.1|Name=mRNA_C-linearis_contig112.1513.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=493bp
MVVCKARSCAKVGSFGIAGTRTAEFCATHASEGMINVISKRCDFPGCSKH
PSYGVVGSKKAEFCVAHAKEGMVDVCSKRCGHPGCTKRSSYGTPGSKKPQ
FCIHHAMKGMIDVVSKRCAEGGCNKWPSYGIPGSKKAEFCAAHAKDGMVG
VCNKRCAHPGCTKQPKYGVAGSKKREFCAPHAKGGMVDVYNKRCGFPGCT
KGPSYGVAGSKKREFCAQHATEGMVNVCSRKRARDARLALEGGGSSASRA
KLDPQAAAAGSGVKKELRKNGGGGEAMFDRKMPVPNSSSADAAAQYPLSF
AGSEQGFGGDGPTGFERQRAEPTSFLDGPQSLIRPGMIIGATPYSHFAAP
PSASSSSAGAGAKQGQTFAGGPRAQADVGSEGLGGNTFERQASTEPRPGH
AVSAGNGDGDGAGARMSSVPPIPAINSAEDAAVAELVMGLKNRRSSMDEN
DGSDAGGAGGGGGGSGSDAGGAGGGGAGDASNQASGNNEISI*
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