prot_C-linearis_contig74.15022.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig74.15022.1
Unique Nameprot_C-linearis_contig74.15022.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length142
Homology
BLAST of mRNA_C-linearis_contig74.15022.1 vs. uniprot
Match: A0A6H5JZM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZM1_9PHAE)

HSP 1 Score: 206 bits (524), Expect = 3.580e-66
Identity = 118/141 (83.69%), Postives = 128/141 (90.78%), Query Frame = 0
Query:    1 MMSDNRKIGTGLLALGGIFLLLGVILFFDAGXXXXXXXXXXXXITMTIGVRRTFVFFFKRKQVRGNLCFFSGIALVFLRWAVIGMVLQVIGFLNLFGPFIPIAVQALRATPVLGNLLNLPIVSTLVDKVAGSGSRGRRAPV 141
            M+SDNR+IG GLLALGGIFLLLGV++ FD GXXXXXXXXXXXX TMTIG RRTFVFFFKRKQ RGNLCFF G+ LVFL WAVIGM  QV+GFLNLFGPFIPIAVQALR TPV+GNLLNLP+VS+LVDK+AGS SRGRRAPV
Sbjct:    1 MVSDNRQIGMGLLALGGIFLLLGVMMLFDPGXXXXXXXXXXXXXTMTIGTRRTFVFFFKRKQARGNLCFFGGVVLVFLNWAVIGMGFQVVGFLNLFGPFIPIAVQALRGTPVVGNLLNLPVVSSLVDKLAGSSSRGRRAPV 141          
BLAST of mRNA_C-linearis_contig74.15022.1 vs. uniprot
Match: A0A835ZGF0_9STRA (Putative GOT1-membrane protein required for ER to Golgi transport n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGF0_9STRA)

HSP 1 Score: 172 bits (436), Expect = 9.530e-53
Identity = 87/139 (62.59%), Postives = 105/139 (75.54%), Query Frame = 0
Query:    2 MSDNRKIGTGLLALGGIFLLLGVILFFDAGXXXXXXXXXXXXITMTIGVRRTFVFFFKRKQVRGNLCFFSGIALVFLRWAVIGMVLQVIGFLNLFGPFIPIAVQALRATPVLGNLLNLPIVSTLVDKVAGSGSRGRRAP 140
            + DN+K+GTGLL LG +FL +GVILFFDA             ITMTIG RRTFVFFFKRKQ+RGNL FF GI LV +RWA +GM+LQV+GFLNLFGPFIPIAV A+R  PV+G++L LP++S LVD++AGS     R P
Sbjct:    3 LDDNKKMGTGLLILGFVFLFMGVILFFDANLLALGDVLFLTGITMTIGARRTFVFFFKRKQLRGNLFFFGGILLVLVRWAFVGMILQVLGFLNLFGPFIPIAVAAMRTLPVIGDILALPVISPLVDRIAGSQQNTDRRP 141          
BLAST of mRNA_C-linearis_contig74.15022.1 vs. uniprot
Match: D8LD56_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD56_ECTSI)

HSP 1 Score: 167 bits (422), Expect = 2.940e-51
Identity = 84/96 (87.50%), Postives = 89/96 (92.71%), Query Frame = 0
Query:   46 MTIGVRRTFVFFFKRKQVRGNLCFFSGIALVFLRWAVIGMVLQVIGFLNLFGPFIPIAVQALRATPVLGNLLNLPIVSTLVDKVAGSGSRGRRAPV 141
            MTIG RRTFVFFFKRKQVRGNLCFF G+ALVFL WAVIGM  QV+GFLNLFGPFIPIAVQALRATPV+GNLLNLP+VS LVDK+AGS SRGRRAPV
Sbjct:    1 MTIGTRRTFVFFFKRKQVRGNLCFFGGVALVFLNWAVIGMGFQVVGFLNLFGPFIPIAVQALRATPVVGNLLNLPVVSALVDKLAGSSSRGRRAPV 96          
BLAST of mRNA_C-linearis_contig74.15022.1 vs. uniprot
Match: K3X7C2_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X7C2_GLOUD)

HSP 1 Score: 141 bits (355), Expect = 1.720e-40
Identity = 70/136 (51.47%), Postives = 97/136 (71.32%), Query Frame = 0
Query:    1 MMSDNRKIGTGLLALGGIFLLLGVILFFDAGXXXXXXXXXXXXITMTIGVRRTFVFFFKRKQVRGNLCFFSGIALVFLRWAVIGMVLQVIGFLNLFGPFIPIAVQALRATPVLGNLLNLPIVSTLVDKVAGSGSRG 136
            M+ DNRKIGT LL +G +F++LGV+LFFDA             + +TIG+ RT  FF ++++ RG +CF  GI LV LR+ +IGM++Q  GFLNLFG F P+AV  LR TPV+G++LNLP++S +VD++AGS  RG
Sbjct:    1 MLDDNRKIGTLLLGIGFVFIMLGVLLFFDAALLALGDVLFLCGLALTIGLTRTIRFFTRKERWRGIVCFLGGIVLVMLRYPIIGMIIQSFGFLNLFGSFFPVAVAFLRQTPVVGSVLNLPVISDVVDRLAGSSKRG 136          
BLAST of mRNA_C-linearis_contig74.15022.1 vs. uniprot
Match: H3G8V1_PHYRM (Uncharacterized protein n=23 Tax=Peronosporaceae TaxID=4777 RepID=H3G8V1_PHYRM)

HSP 1 Score: 140 bits (354), Expect = 2.450e-40
Identity = 72/136 (52.94%), Postives = 96/136 (70.59%), Query Frame = 0
Query:    1 MMSDNRKIGTGLLALGGIFLLLGVILFFDAGXXXXXXXXXXXXITMTIGVRRTFVFFFKRKQVRGNLCFFSGIALVFLRWAVIGMVLQVIGFLNLFGPFIPIAVQALRATPVLGNLLNLPIVSTLVDKVAGSGSRG 136
            M+ DNRKIGT LL LG  FLLLGV++FFDA             + +TIG+ RT  FF ++++ RG +CF  GI LV LR+ +IGM++Q  GFLNLFG F P+AV  LR TPV+GN+LNLP++S +VD++AG+  RG
Sbjct:    1 MLDDNRKIGTLLLGLGFAFLLLGVLMFFDAAMLALGDVLFLSGVALTIGLSRTVRFFTRKERWRGIVCFLGGILLVMLRYPMIGMIIQSFGFLNLFGSFFPVAVAFLRQTPVIGNVLNLPVISDIVDRLAGAQKRG 136          
BLAST of mRNA_C-linearis_contig74.15022.1 vs. uniprot
Match: A0A5D6XZN9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XZN9_9STRA)

HSP 1 Score: 140 bits (353), Expect = 3.470e-40
Identity = 74/136 (54.41%), Postives = 95/136 (69.85%), Query Frame = 0
Query:    1 MMSDNRKIGTGLLALGGIFLLLGVILFFDAGXXXXXXXXXXXXITMTIGVRRTFVFFFKRKQVRGNLCFFSGIALVFLRWAVIGMVLQVIGFLNLFGPFIPIAVQALRATPVLGNLLNLPIVSTLVDKVAGSGSRG 136
            M+ DNRKIGT LL +G  FLLLGV+LFFDA             + +TIG+ RT  FF +R++ RG +CF  GI LV LR+ +IGM LQ  GFLNLFG F P+AV  LR TPV+GN+L+LP++S +VD++AGS  RG
Sbjct:    1 MLDDNRKIGTLLLGVGFAFLLLGVLLFFDAALLALGDVLFLCGLALTIGLSRTVRFFTRRERWRGIVCFLGGILLVLLRFPIIGMALQSFGFLNLFGSFFPVAVAFLRQTPVVGNVLSLPVISDVVDRLAGSSKRG 136          
BLAST of mRNA_C-linearis_contig74.15022.1 vs. uniprot
Match: A0A1Y2HYQ9_9FUNG (Vesicle transport protein n=1 Tax=Catenaria anguillulae PL171 TaxID=765915 RepID=A0A1Y2HYQ9_9FUNG)

HSP 1 Score: 139 bits (350), Expect = 1.020e-39
Identity = 67/131 (51.15%), Postives = 94/131 (71.76%), Query Frame = 0
Query:    2 MSDNRKIGTGLLALGGIFLLLGVILFFDAGXXXXXXXXXXXXITMTIGVRRTFVFFFKRKQVRGNLCFFSGIALVFLRWAVIGMVLQVIGFLNLFGPFIPIAVQALRATPVLGNLLNLPIVSTLVDKVAGS 132
            +SD++KIG GL A G +FLLLGV+LFFD G            +TM IG+ +TF FF ++ ++RG LCFF+GI LVF+RW +IGM+++V GF+NLFG F P+ +  LR  PV+G LL+ P V+ LVD++AG+
Sbjct:    6 LSDSQKIGVGLTAFGSLFLLLGVLLFFDGGLLAIGNVLFLGGVTMLIGLSKTFAFFARKNKLRGTLCFFAGILLVFMRWPIIGMMIEVFGFINLFGDFFPVVIAFLRRIPVIGPLLSAPGVTHLVDRLAGT 136          
BLAST of mRNA_C-linearis_contig74.15022.1 vs. uniprot
Match: A0A397UFS2_9GLOM (Vesicle transport protein n=3 Tax=Gigaspora TaxID=4873 RepID=A0A397UFS2_9GLOM)

HSP 1 Score: 137 bits (345), Expect = 5.350e-39
Identity = 67/131 (51.15%), Postives = 88/131 (67.18%), Query Frame = 0
Query:    2 MSDNRKIGTGLLALGGIFLLLGVILFFDAGXXXXXXXXXXXXITMTIGVRRTFVFFFKRKQVRGNLCFFSGIALVFLRWAVIGMVLQVIGFLNLFGPFIPIAVQALRATPVLGNLLNLPIVSTLVDKVAGS 132
            +SD +KIG GL A G  F+LLGV+L FD G            IT+ IG  +T +FF +R ++RG +CFF GI LVFL+W V+GMV+++ GFLNLFG F P+ V  LR  PV+G+LLN P +S  VDK+ GS
Sbjct:    3 LSDTQKIGVGLTAFGSFFMLLGVLLLFDGGLLAIGNILFLSGITLIIGFNKTLIFFARRNKIRGTICFFGGILLVFLKWPVLGMVIELFGFLNLFGDFFPVIVSFLRKLPVIGSLLNAPGISHAVDKITGS 133          
BLAST of mRNA_C-linearis_contig74.15022.1 vs. uniprot
Match: A0A067CE71_SAPPC (Uncharacterized protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CE71_SAPPC)

HSP 1 Score: 137 bits (345), Expect = 5.680e-39
Identity = 72/136 (52.94%), Postives = 92/136 (67.65%), Query Frame = 0
Query:    1 MMSDNRKIGTGLLALGGIFLLLGVILFFDAGXXXXXXXXXXXXITMTIGVRRTFVFFFKRKQVRGNLCFFSGIALVFLRWAVIGMVLQVIGFLNLFGPFIPIAVQALRATPVLGNLLNLPIVSTLVDKVAGSGSRG 136
            MM DNRKIGT LL +G +FL LGV+LFFDA             + MTIG+ RT  FF ++ + RG +CF  GI LV +R+ +IGM +Q  GFLNLFG F P+AV  LR TPVLG +LNLP++  +VDK+AG+  RG
Sbjct:    1 MMDDNRKIGTLLLGVGFLFLFLGVMLFFDAALLAIGDVLFLSGLAMTIGLSRTIKFFTRKDRWRGIVCFLGGIFLVMIRYPIIGMCVQSFGFLNLFGSFFPVAVAFLRQTPVLGTVLNLPVIGDIVDKLAGAQKRG 136          
BLAST of mRNA_C-linearis_contig74.15022.1 vs. uniprot
Match: F0WY71_9STRA (Vesicle transporter GOT1Blike protein putative n=2 Tax=Albugo TaxID=65356 RepID=F0WY71_9STRA)

HSP 1 Score: 135 bits (341), Expect = 2.370e-38
Identity = 73/133 (54.89%), Postives = 90/133 (67.67%), Query Frame = 0
Query:    4 DNRKIGTGLLALGGIFLLLGVILFFDAGXXXXXXXXXXXXITMTIGVRRTFVFFFKRKQVRGNLCFFSGIALVFLRWAVIGMVLQVIGFLNLFGPFIPIAVQALRATPVLGNLLNLPIVSTLVDKVAGSGSRG 136
            DNRKIGT LL +G  FLLLGVILFFDA             + +TIG +RT  FF +R++ RG LCF  GI LV LRW V+GMVLQ  GFLNLFG F P+AV  +R  P+LG +LNLP + ++VD++AGS   G
Sbjct:    5 DNRKIGTLLLGIGFGFLLLGVILFFDAALLALGDILLLSGVALTIGFQRTIRFFTRRERWRGILCFLGGIILVMLRWPVVGMVLQSFGFLNLFGSFFPVAVAFMRQMPILGTILNLPGIRSVVDRLAGSTKSG 137          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig74.15022.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JZM1_9PHAE3.580e-6683.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZGF0_9STRA9.530e-5362.59Putative GOT1-membrane protein required for ER to ... [more]
D8LD56_ECTSI2.940e-5187.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
K3X7C2_GLOUD1.720e-4051.47Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
H3G8V1_PHYRM2.450e-4052.94Uncharacterized protein n=23 Tax=Peronosporaceae T... [more]
A0A5D6XZN9_9STRA3.470e-4054.41Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A1Y2HYQ9_9FUNG1.020e-3951.15Vesicle transport protein n=1 Tax=Catenaria anguil... [more]
A0A397UFS2_9GLOM5.350e-3951.15Vesicle transport protein n=3 Tax=Gigaspora TaxID=... [more]
A0A067CE71_SAPPC5.680e-3952.94Uncharacterized protein n=4 Tax=Saprolegniaceae Ta... [more]
F0WY71_9STRA2.370e-3854.89Vesicle transporter GOT1Blike protein putative n=2... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007305Vesicle transport protein, Got1/SFT2-likePFAMPF04178Got1coord: 16..111
e-value: 2.7E-14
score: 53.6
NoneNo IPR availablePANTHERPTHR21493:SF9GOLGI TRANSPORT PROTEIN 1-RELATEDcoord: 2..129
NoneNo IPR availablePANTHERPTHR21493CGI-141-RELATED/LIPASE CONTAINING PROTEINcoord: 2..129
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 33..37
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 38..58
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 91..141
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..32
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 59..66
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 67..90
NoneNo IPR availableTMHMMTMhelixcoord: 38..55
NoneNo IPR availableTMHMMTMhelixcoord: 12..34
NoneNo IPR availableTMHMMTMhelixcoord: 68..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig74contigC-linearis_contig74:537313..539824 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig74.15022.1mRNA_C-linearis_contig74.15022.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig74 537029..540630 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig74.15022.1 ID=prot_C-linearis_contig74.15022.1|Name=mRNA_C-linearis_contig74.15022.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=142bp
MMSDNRKIGTGLLALGGIFLLLGVILFFDAGLLAMGDVLFLAGITMTIGV
RRTFVFFFKRKQVRGNLCFFSGIALVFLRWAVIGMVLQVIGFLNLFGPFI
PIAVQALRATPVLGNLLNLPIVSTLVDKVAGSGSRGRRAPV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007305Vesicle_transpt_Got1/SFT2