mRNA_C-linearis_contig74.15004.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig74.15004.1
Unique NamemRNA_C-linearis_contig74.15004.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
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BLAST of mRNA_C-linearis_contig74.15004.1 vs. uniprot
Match: A0A6H5JW11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW11_9PHAE)

HSP 1 Score: 613 bits (1581), Expect = 3.490e-207
Identity = 429/830 (51.69%), Postives = 481/830 (57.95%), Query Frame = 1 
Query:    1 MSRASRTDAGLCIPRMVPWRDWDEWYRVKALLFSPEPYLRSQGVQHVAVWQSRERIPHTVETTSQLVEARLNDVGAAG-GGLAMNGARRSEEELRLIYSAVVVRAVNGLTGHEQKSTHAAPVSSLAREIGLPTWIVDIRHEAAHKQLPGIVTLRIASDFLVDYLWRRYWGPQAEHLGFVWGAFDQLISRYKATSESDASLPSNSSPGNAGQRHRRPPASPAPATNKKRRTGTSSTSGSETPGPVED---NPPAGGVADGSSTSKTPRSSSRGNTAPPGSAXXXXXXXXXXXHGAAVATEVAANEIALSATPTALSWALVSLLADGG--VGAGSGADGLAGGRRRGQGHLLPRSRDKYPTPGSPGVDAKEVGRRITSRWATLLGMFHAKWRGFGAALLVRLVEALLNNAESLSPLSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLERQAAFIEIWVRHLLSRRWHLRGCDARIRSRLRETAADAGLSPAFCDEQEGSWDGEESAWAGKP--APLPVLRAAFFPVRELLERCRRLLETLPMVVAAPAETHPPPTAAAVTARVLGDDGINPAGGNT-----PAPSATYACGASVSK-----AHWARAGLGAVCRALAESLPGEDATSANEDAAAXXXXXXXXXXXXXXXXXA-----VGDQSPSSVRREVGSVASGGVGDGAIVSGEDGGDIVGXXXXXXXXXXXXXXXXXXXXXXXXXXXX---TMMDLDALERLLGADGSSPPCSAVSREGNGSFPSA-SVGAVDDAAARVAGAAGGSRLRGDAPVEVVGVGRAPAADGGGSAWEVVGTWTPCAIGTLPGWSAARL 2409
            MSR    DAG  IPRM+PWRDWDEWYRVKALLFSPEPYLRSQGVQHVAVWQSRERIPH VETTSQLVE RLND GAAG GGL  +G +RSEEELRLIYSAVVVRAVNGLTGHEQK+ HAAPVSSLAREIGLPTWIVDIRHEAAHKQLPGIVTLR+A+DFLVDYLWRR+W PQAEHLGFVWGAFDQLI RYKATS+SDA +P +SSPG+AG+          P++ K R                 D    PP            TPR +     +  G+A                A EVAA+EI LSATPTALSWA+VSLLADGG  V       G+ G + RGQGHLLPRSRDKYPTP       + +G      WATLL MFH++WRGFGAALLVRLVEALL+NA S    +                  XXXXXXXXXXXXXX LERQAAFIEIWV HLLSRRWHLR  DAR+R  LRE A  AGLSP F   +E  W+  ES WA KP  +P+ VL AA+FPV ELL+RCRR L  LP     P+  +P         R  GD  +      +     P+PS          K     AHWARAGL AVC ALA +LPGE+A S +  AA                  A     V  Q   S  +EV            +   E+     G                                MM LD LERLLG D SS   S  +  G  S PS+ + GAV ++  R  G    S + GD                 G AWE+V  WTPCAIGTLPG SAARL
Sbjct:    1 MSRPINADAGQYIPRMIPWRDWDEWYRVKALLFSPEPYLRSQGVQHVAVWQSRERIPHAVETTSQLVEVRLNDAGAAGRGGLTFHGGQRSEEELRLIYSAVVVRAVNGLTGHEQKAAHAAPVSSLAREIGLPTWIVDIRHEAAHKQLPGIVTLRLAADFLVDYLWRRHWSPQAEHLGFVWGAFDQLICRYKATSDSDALMPRSSSPGHAGR----------PSSKKPRTXXXXXXXXXXXXXXXXDXXSKPPG-----------TPRGTGSSAASKFGAA----------------AMEVAAHEIVLSATPTALSWAVVSLLADGGGRVRGEYFVGGVGGTKGRGQGHLLPRSRDKYPTP------VRGLGG---GWWATLLDMFHSRWRGFGAALLVRLVEALLDNASSTPGAA---VNADENGRSACGGGNXXXXXXXXXXXXXXGLERQAAFIEIWVNHLLSRRWHLRTSDARVREALREEAVRAGLSPTFFQAKEALWEENESTWADKPGESPVSVLHAAYFPVHELLDRCRRALSALP-AARQPSAANP---------RTPGDGSLVGKSERSTCPAPPSPSTADGIADDEGKNIGYSAHWARAGLDAVCHALAAALPGENAASPSASAATFGLDAHRKGECDNAAAGAPSGPVVATQVAISANQEVPL---------CVPPTEECNQTAGPPGEVLNHCSSGGAERGDAAKGPASETAPLLAMMGLDDLERLLGGDASS---SLAAPGGYTSVPSSIAAGAVRESGFREVGRP--SEVNGDT----------------GRAWELVEAWTPCAIGTLPGSSAARL 741
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BLAST of mRNA_C-linearis_contig74.15004.1 vs. uniprot
Match: D7FGU4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGU4_ECTSI)

HSP 1 Score: 444 bits (1143), Expect = 2.930e-147
Identity = 243/366 (66.39%), Postives = 276/366 (75.41%), Query Frame = 1 
Query:   46 MVPWRDWDEWYRVKALLFSPEPYLRSQGVQHVAVWQSRERIPHTVETTSQLVEARLNDVGAA-GGGLAMNGARRSEEELRLIYSAVVVRAVNGLTGHEQKSTHAAPVSSLAREIGLPTWIVDIRHEAAHKQLPGIVTLRIASDFLVDYLWRRYWGPQAEHLGFVWGAFDQLISRYKATSESDASLPSNSSPGNAGQRHRRPPASPAPATNKKRRTGTSSTSGSETPGPVEDNPPAGGVADGSSTSK---TPRSSSRGNTAPPGSAXXXXXXXXXXXHGAAVATEVAANEIALSATPTALSWALVSLLADGG--VGAGSGADGLAGGRRRGQGHLLPRSRDKYPTPGSPGVDAKEVGRRITSRWATL 1125
            M+PWRDWDEWYRVKALLFSP+PYLR+QGVQHVAVWQSRERIPH VETTSQLVE RLNDVGAA GGGLA +G +RSEEELRLIYSAVVVRAVNGLTGHEQK+ HAAPVSSLAREIGLPTWIVDIRHEAAHKQLPGIV+LR+A+DFLVDYLWRR+W PQAEHLGFVWGAFDQLI RYKATS+S+A +P +SSPG+AG+                     SS                    DG S+SK   TPR +     + PG+A                A EVAA+EIALSATPTALSWA+V+LLADGG  VG G    G++G + RGQGHLLPRSRDKYPTPG+PGVD+++V RR+T+R +TL
Sbjct:    1 MIPWRDWDEWYRVKALLFSPDPYLRTQGVQHVAVWQSRERIPHAVETTSQLVEVRLNDVGAAKGGGLAFHGGQRSEEELRLIYSAVVVRAVNGLTGHEQKAAHAAPVSSLAREIGLPTWIVDIRHEAAHKQLPGIVSLRLAADFLVDYLWRRHWSPQAEHLGFVWGAFDQLIGRYKATSDSEALMPRSSSPGHAGR---------------------SSXXXXXXXXXXXXXXXXXXXXDGDSSSKPPGTPRGTGSSAASKPGAA----------------AMEVAAHEIALSATPTALSWAVVALLADGGGRVGGGDCVGGVSGTKGRGQGHLLPRSRDKYPTPGTPGVDSRQVSRRLTARCSTL 329
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BLAST of mRNA_C-linearis_contig74.15004.1 vs. uniprot
Match: D8LD46_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD46_ECTSI)

HSP 1 Score: 182 bits (462), Expect = 2.580e-48
Identity = 131/215 (60.93%), Postives = 150/215 (69.77%), Query Frame = 1 
Query:  877 ATEVAANEIALSATPTALSWALVSLLADGGVGAGSGADGLAGGRRRGQGHLLPRSRDKYPTPGSPGVDAKEVGRRITSRWATLLGMFHAKWRGFGAALLVRLVEALLNNAESLSPLSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLERQAAFIEIWVRHLLSRRWHLRGCDARIRSRLRETAADAGLSPAFCDEQEGSWDGEESAWAGKP 1521
            A EVAA+EIALSATPTALSWA+V+LLADGG G   G D + G   R QGHLLPRSRDKYPTPG+PGVD+++V RR+++RWATLL MFH++WRGFGAALLVRLVEALL+N +S +P               XXXXXXXXXXXXXXXXXXXXLERQAAFIEIW               AR+R  LRE A    L P F   +E  W+  ES W  KP
Sbjct:   75 AMEVAAHEIALSATPTALSWAVVALLADGG-GRVRGGDFVGGVGGREQGHLLPRSRDKYPTPGTPGVDSRQVSRRLSARWATLLDMFHSRWRGFGAALLVRLVEALLDN-DSSTP-GEAVNADDDGTSACXXXXXXXXXXXXXXXXXXXXLERQAAFIEIW---------------ARVRGALREEAVHDRLPPTFFQAKEALWEENESTWVDKP 271
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BLAST of mRNA_C-linearis_contig74.15004.1 vs. uniprot
Match: A0A835YSI0_9STRA (Las1-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSI0_9STRA)

HSP 1 Score: 174 bits (441), Expect = 6.530e-47
Identity = 80/168 (47.62%), Postives = 115/168 (68.45%), Query Frame = 1 
Query:   40 PRMVPWRDWDEWYRVKALLFSPEPYLRSQGVQHVAVWQSRERIPHTVETTSQLVEARLND------VGAAGGGLAMNGARRSEEELRLIYSAVVVRAVNGLTGHEQKSTHAAPVSSLAREIGLPTWIVDIRHEAAHKQLPGIVTLRIASDFLVDYLWRRYWGPQAEHL 525
            PR++PW++WDEW  V+ LL+SP+P  R++GV  VA W+ RER+PH VE T+QLVE  L++       G  G         R+  +LRL+YS+V+VR VNGL    QK  HA  +  +AR+IG+P+W+VD+RH+AAHK +P + + R+AS FL+DYL +RYW  Q ++L
Sbjct:    8 PRLLPWQNWDEWVHVRGLLWSPDPVDRNEGVLRVAAWRCRERVPHAVECTAQLVEVALHEWRCSTYPGQYG---------RNSLQLRLMYSSVIVRTVNGLVEAHQKCAHAISIQQIARQIGIPSWLVDLRHDAAHKDMPSLASFRLASAFLLDYLSQRYWDVQQQNL 166
[Close]
BLAST of mRNA_C-linearis_contig74.15004.1 vs. uniprot
Match: A0A7S2RN98_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RN98_9STRA)

HSP 1 Score: 153 bits (387), Expect = 1.070e-38
Identity = 75/176 (42.61%), Postives = 105/176 (59.66%), Query Frame = 1 
Query:   40 PRMVPWRDWDEWYRVKALLFSPEPYLRSQGVQHVAVWQSRERIPHTVETTSQLVEARLNDVGAAGGGLAMNGARRSEEELRLIYSAVVVRAVNGLTGHEQKSTHAAPVSSLAREIGLPTWIVDIRHEAAHKQLPGIVTLRIASDFLVDYLWRRYWGPQAEHLGFVWGAFDQLISRY 567
            PR++PW+ WDEW+ V+  LFS +P L+   V  VA W+ R R+PH VE+T+QLVE  L+D G  G          SE  L+  YS  VVRAVNG+   EQ+   A+ VS +A  +GLPTW+VD+RH+A H  +P + TLR+A+  LV + +  YW  Q   L  +      ++ RY
Sbjct:   19 PRVLPWQHWDEWFEVRDSLFSGDPLLQRAAVARVAAWRVRGRVPHAVESTAQLVEVMLDDQGRDG---------LSELVLQSCYSLSVVRAVNGVADAEQRGATASSVSLMASRVGLPTWLVDLRHDATHNAMPPLQTLRVAAQTLVHWFFEGYWTSQTRQLESLESLCVSVVQRY 185
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BLAST of mRNA_C-linearis_contig74.15004.1 vs. uniprot
Match: A0A7S0GXZ1_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0GXZ1_MICPS)

HSP 1 Score: 145 bits (366), Expect = 2.300e-36
Identity = 71/163 (43.56%), Postives = 98/163 (60.12%), Query Frame = 1 
Query:   43 RMVPWRDWDEWYRVKALLFSPEPYLRSQGVQHVAVWQSRERIPHTVETTSQLVEARLNDVGAAG--GGLAMNGARRSEEELRLIYSAVVVRAVNGLTGHEQKSTHAAPVSSLAREIGLPTWIVDIRHEAAHKQLPGIVTLRIASDFLVDYLWRRYWGPQAEHL 525
            R VPWRDW EW RV+  L   +P  R   +  VA W+ R R+PH V+ T+ L+E R  D G  G  G +   GA  SE  LRL Y+A +VR VNG     QK  +AAPV +LA+ +G+P  +VD+R  A+H+++P +  LR AS+  + +L+ RYW  QA  L
Sbjct:    5 RRVPWRDWAEWDRVRVGLCGDDPQARDASIARVADWRRRGRVPHAVDCTASLLETRSLDAGVPGNVGNVGSGGAPLSENMLRLAYAAALVRMVNGAVDPSQKGKYAAPVMTLAKRMGIPAVLVDVRMAASHQEMPALALLRHASERALQWLFERYWHAQANQL 167
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BLAST of mRNA_C-linearis_contig74.15004.1 vs. uniprot
Match: A0A7S3GZ26_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GZ26_9STRA)

HSP 1 Score: 145 bits (365), Expect = 2.340e-34
Identity = 71/159 (44.65%), Postives = 103/159 (64.78%), Query Frame = 1 
Query:   37 IPRMVPWRDWDEWYRVKALLFSPEPYLRSQGVQHVAVWQSRERIPHTVETTSQLVEARLNDVGAAGGGLAMNGARRSEEELRLIYSAVVVRAVNGLTGHEQKSTHAAPVSSLAREIGLPTWIVDIRHEAAHKQLPGIVTLRIASDFLVDYLWRRYWGPQ 513
            IPR +P+ DWDEW  VK+ LFS EP   S  ++ V++W+ R R+P +V++T+QLVE RL D  +       +    SE EL+L+YSA VVR+VNGL    Q+  +A  V +LA  +GLP WIV++RH+A H Q+P +  LR A+  L+++ +  YW PQ
Sbjct:   12 IPRFLPFADWDEWITVKSGLFSTEPRQISVALEMVSLWRVRGRLPLSVDSTAQLVELRLRDSPSENRAHVYH----SENELKLLYSAAVVRSVNGLVDPSQQGVYATSVLTLAERMGLPGWIVELRHDATHNQMPSLSVLRTAASTLINWYFDFYWQPQ 166
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BLAST of mRNA_C-linearis_contig74.15004.1 vs. uniprot
Match: A0A0N7L5Q0_PLAHL (Nuclear protein involved in cell morphogenesis and cell surface growth n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L5Q0_PLAHL)

HSP 1 Score: 147 bits (370), Expect = 1.070e-33
Identity = 71/160 (44.38%), Postives = 98/160 (61.25%), Query Frame = 1 
Query:   34 CIPRMVPWRDWDEWYRVKALLFSPEPYLRSQGVQHVAVWQSRERIPHTVETTSQLVEARLNDVGAAGGGLAMNGARRSEEELRLIYSAVVVRAVNGLTGHEQKSTHAAPVSSLAREIGLPTWIVDIRHEAAHKQLPGIVTLRIASDFLVDYLWRRYWGPQ 513
            C    VPW DW EW  V   LFS +P+L+ + V  VA W+SR ++P  +  TSQLVE +L++  A     A+  + RS  EL L+Y+ ++VR VNGL    QK  +A  VS+LA+ IG+P WIVD+RHE+ H QLP +  LR A+  L+ +L   YW  Q
Sbjct:    3 CRRNAVPWVDWVEWQDVHESLFSTDPFLQQRAVSRVAAWRSRTQLPVAINATSQLVELQLHESMAQHHHHAVGVSSRSHSELSLLYANIIVRCVNGLVDASQKGEYAHAVSTLAQRIGIPLWIVDLRHESTHNQLPSLPVLRFAARHLLAWLRANYWNAQ 162
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BLAST of mRNA_C-linearis_contig74.15004.1 vs. uniprot
Match: A0A329SSQ6_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SSQ6_9STRA)

HSP 1 Score: 146 bits (368), Expect = 2.180e-33
Identity = 70/157 (44.59%), Postives = 99/157 (63.06%), Query Frame = 1 
Query:   49 VPWRDWDEWYRVKALLFSPEPYLRSQGVQHVAVWQSRERIPHTVETTSQLVEARLNDVGAAGGGLAMNGARRSEEELRLIYSAVVVRAVNGLTGHEQKSTHAAPVSSLAREIGLPTWIVDIRHEAAHKQLPGIVTLRIASDFLVDYLWRRYWGPQAE 519
            VPW DW EW  V   LFS +P+ + + V  VA W+SR ++P  +  T+QLVE +L+   A     A+  + RS  EL L+Y++V+VR VNGL    QK  +A  VS+LA+ IG+P WIVD+RHE++H QLP +  LR A+  L+ +L   YWG Q +
Sbjct:    8 VPWLDWAEWQEVHVGLFSSDPFAQQRVVSRVASWRSRMQLPVAINATAQLVELQLHQSMAQNHHHAVGVSSRSHMELSLLYASVIVRCVNGLVDGSQKGAYAMAVSTLAQRIGIPLWIVDLRHESSHNQLPSLPVLRFAARHLLAWLRSNYWGAQED 164
[Close]
BLAST of mRNA_C-linearis_contig74.15004.1 vs. uniprot
Match: W2QXV9_PHYPN (Uncharacterized protein n=7 Tax=Phytophthora TaxID=4783 RepID=W2QXV9_PHYPN)

HSP 1 Score: 146 bits (368), Expect = 2.210e-33
Identity = 69/157 (43.95%), Postives = 100/157 (63.69%), Query Frame = 1 
Query:   49 VPWRDWDEWYRVKALLFSPEPYLRSQGVQHVAVWQSRERIPHTVETTSQLVEARLNDVGAAGGGLAMNGARRSEEELRLIYSAVVVRAVNGLTGHEQKSTHAAPVSSLAREIGLPTWIVDIRHEAAHKQLPGIVTLRIASDFLVDYLWRRYWGPQAE 519
            +PW DW EW  V   LFS +P+ + + V  VA W+SR ++P  +  T+QLVE +L++  A     A+  + RS  EL L+Y++V+VR VNGL    QK  +A  VS+LA+ IG+P WIVD+RHE++H QLP +  LR A+  L+ +L   YWG Q +
Sbjct:    8 LPWLDWAEWQEVHVGLFSSDPFAQQRVVSRVASWRSRVQLPVAINATAQLVELQLHESMAQHHHHAVGVSSRSHMELSLLYASVIVRCVNGLVDGSQKGAYATAVSTLAQRIGIPLWIVDLRHESSHNQLPSLPVLRFAAQHLLAWLRSNYWGAQED 164
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig74.15004.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JW11_9PHAE3.490e-20751.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FGU4_ECTSI2.930e-14766.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LD46_ECTSI2.580e-4860.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YSI0_9STRA6.530e-4747.62Las1-like protein (Fragment) n=1 Tax=Tribonema min... [more]
A0A7S2RN98_9STRA1.070e-3842.61Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S0GXZ1_MICPS2.300e-3643.56Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]
A0A7S3GZ26_9STRA2.340e-3444.65Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A0N7L5Q0_PLAHL1.070e-3344.38Nuclear protein involved in cell morphogenesis and... [more]
A0A329SSQ6_9STRA2.180e-3344.59Uncharacterized protein n=1 Tax=Phytophthora cacto... [more]
W2QXV9_PHYPN2.210e-3343.95Uncharacterized protein n=7 Tax=Phytophthora TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig74contigC-linearis_contig74:306819..318295 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score449.1
Seed ortholog evalue4.3e-123
Seed eggNOG ortholog2880.D7FGU4
Preferred nameLAS1L
KEGG koko:K05956,ko:K16912
Hectar predicted targeting categoryother localisation
GOsGO:0000460,GO:0000469,GO:0000470,GO:0000478,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0006139,GO:0006325,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0022613,GO:0030684,GO:0030687,GO:0031974,GO:0031981,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0035097,GO:0042254,GO:0042273,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0044665,GO:0046483,GO:0051276,GO:0070013,GO:0071339,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:1901360,GO:1902494,GO:1990234,GO:1990904
EggNOG free text desc.endonucleolytic cleavage involved in rRNA processing
EggNOG OGsKOG2425@1,KOG2425@2759
EC2.5.1.60
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01006,ko03009,ko04131
Exons10
Model size2415
Cds size2415
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig74.15004.1prot_C-linearis_contig74.15004.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig74 306819..318295 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930411.2934024-CDS-C-linearis_contig74:306818..3077111622930411.2934024-CDS-C-linearis_contig74:306818..307711Chordaria linearis ClinC8C monoicousCDSC-linearis_contig74 306819..307711 -
1690881056.0535607-CDS-C-linearis_contig74:306818..3077111690881056.0535607-CDS-C-linearis_contig74:306818..307711Chordaria linearis ClinC8C monoicousCDSC-linearis_contig74 306819..307711 -
1622930411.3118181-CDS-C-linearis_contig74:308383..3085011622930411.3118181-CDS-C-linearis_contig74:308383..308501Chordaria linearis ClinC8C monoicousCDSC-linearis_contig74 308384..308501 -
1690881056.067508-CDS-C-linearis_contig74:308383..3085011690881056.067508-CDS-C-linearis_contig74:308383..308501Chordaria linearis ClinC8C monoicousCDSC-linearis_contig74 308384..308501 -
1622930411.329952-CDS-C-linearis_contig74:308619..3089111622930411.329952-CDS-C-linearis_contig74:308619..308911Chordaria linearis ClinC8C monoicousCDSC-linearis_contig74 308620..308911 -
1690881056.0800252-CDS-C-linearis_contig74:308619..3089111690881056.0800252-CDS-C-linearis_contig74:308619..308911Chordaria linearis ClinC8C monoicousCDSC-linearis_contig74 308620..308911 -
1622930411.3638127-CDS-C-linearis_contig74:313157..3132071622930411.3638127-CDS-C-linearis_contig74:313157..313207Chordaria linearis ClinC8C monoicousCDSC-linearis_contig74 313158..313207 -
1690881056.089579-CDS-C-linearis_contig74:313157..3132071690881056.089579-CDS-C-linearis_contig74:313157..313207Chordaria linearis ClinC8C monoicousCDSC-linearis_contig74 313158..313207 -
1622930411.383148-CDS-C-linearis_contig74:313479..3139781622930411.383148-CDS-C-linearis_contig74:313479..313978Chordaria linearis ClinC8C monoicousCDSC-linearis_contig74 313480..313978 -
1690881056.098956-CDS-C-linearis_contig74:313479..3139781690881056.098956-CDS-C-linearis_contig74:313479..313978Chordaria linearis ClinC8C monoicousCDSC-linearis_contig74 313480..313978 -
1622930411.4004135-CDS-C-linearis_contig74:314882..3150101622930411.4004135-CDS-C-linearis_contig74:314882..315010Chordaria linearis ClinC8C monoicousCDSC-linearis_contig74 314883..315010 -
1690881056.111501-CDS-C-linearis_contig74:314882..3150101690881056.111501-CDS-C-linearis_contig74:314882..315010Chordaria linearis ClinC8C monoicousCDSC-linearis_contig74 314883..315010 -
1622930411.4223883-CDS-C-linearis_contig74:315601..3156941622930411.4223883-CDS-C-linearis_contig74:315601..315694Chordaria linearis ClinC8C monoicousCDSC-linearis_contig74 315602..315694 -
1690881056.128321-CDS-C-linearis_contig74:315601..3156941690881056.128321-CDS-C-linearis_contig74:315601..315694Chordaria linearis ClinC8C monoicousCDSC-linearis_contig74 315602..315694 -
1622930411.4385915-CDS-C-linearis_contig74:316122..3162691622930411.4385915-CDS-C-linearis_contig74:316122..316269Chordaria linearis ClinC8C monoicousCDSC-linearis_contig74 316123..316269 -
1690881056.137104-CDS-C-linearis_contig74:316122..3162691690881056.137104-CDS-C-linearis_contig74:316122..316269Chordaria linearis ClinC8C monoicousCDSC-linearis_contig74 316123..316269 -
1622930411.4581687-CDS-C-linearis_contig74:316923..3170311622930411.4581687-CDS-C-linearis_contig74:316923..317031Chordaria linearis ClinC8C monoicousCDSC-linearis_contig74 316924..317031 -
1690881056.1454659-CDS-C-linearis_contig74:316923..3170311690881056.1454659-CDS-C-linearis_contig74:316923..317031Chordaria linearis ClinC8C monoicousCDSC-linearis_contig74 316924..317031 -
1622930411.4804513-CDS-C-linearis_contig74:318208..3182951622930411.4804513-CDS-C-linearis_contig74:318208..318295Chordaria linearis ClinC8C monoicousCDSC-linearis_contig74 318209..318295 -
1690881056.1533597-CDS-C-linearis_contig74:318208..3182951690881056.1533597-CDS-C-linearis_contig74:318208..318295Chordaria linearis ClinC8C monoicousCDSC-linearis_contig74 318209..318295 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig74.15004.1

>prot_C-linearis_contig74.15004.1 ID=prot_C-linearis_contig74.15004.1|Name=mRNA_C-linearis_contig74.15004.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=805bp
MSRASRTDAGLCIPRMVPWRDWDEWYRVKALLFSPEPYLRSQGVQHVAVW
QSRERIPHTVETTSQLVEARLNDVGAAGGGLAMNGARRSEEELRLIYSAV
VVRAVNGLTGHEQKSTHAAPVSSLAREIGLPTWIVDIRHEAAHKQLPGIV
TLRIASDFLVDYLWRRYWGPQAEHLGFVWGAFDQLISRYKATSESDASLP
SNSSPGNAGQRHRRPPASPAPATNKKRRTGTSSTSGSETPGPVEDNPPAG
GVADGSSTSKTPRSSSRGNTAPPGSAPSASSASKPAAHGAAVATEVAANE
IALSATPTALSWALVSLLADGGVGAGSGADGLAGGRRRGQGHLLPRSRDK
YPTPGSPGVDAKEVGRRITSRWATLLGMFHAKWRGFGAALLVRLVEALLN
NAESLSPLSPPPPPPPPPNAAAHPSGAGTSSGGGGGGGGGGGLERQAAFI
EIWVRHLLSRRWHLRGCDARIRSRLRETAADAGLSPAFCDEQEGSWDGEE
SAWAGKPAPLPVLRAAFFPVRELLERCRRLLETLPMVVAAPAETHPPPTA
AAVTARVLGDDGINPAGGNTPAPSATYACGASVSKAHWARAGLGAVCRAL
AESLPGEDATSANEDAAAAASAAAAAGDEAGAEGGAVGDQSPSSVRREVG
SVASGGVGDGAIVSGEDGGDIVGGGDDAERVKSAESTTAAAAAAAAAAGS
TTMMDLDALERLLGADGSSPPCSAVSREGNGSFPSASVGAVDDAAARVAG
AAGGSRLRGDAPVEVVGVGRAPAADGGGSAWEVVGTWTPCAIGTLPGWSA
ARLF*
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mRNA from alignment at C-linearis_contig74:306819..318295-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig74.15004.1 ID=mRNA_C-linearis_contig74.15004.1|Name=mRNA_C-linearis_contig74.15004.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=11477bp|location=Sequence derived from alignment at C-linearis_contig74:306819..318295- (Chordaria linearis ClinC8C monoicous)
ATGAGTAGAGCTTCCCGTACCGACGCTGGGTTGTGCATTCCCCGGATGGT
TCCATGGCGAGACTGGGATGAGTGGTACCGGGTCAAGGTAAGCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGGTCTCTCTCT
CAAACTCAAAACTCGCATCACGTCCCGAATGCATCGCCAGCCACGACGTT
GCACCCCCCCCCCCGCCTTCTGTCTTACAGCTTGGCGCAGTGCCGTGCAG
AGCAAGGGCAATACGCATACGTCATGAGATGAGCGCTTGTTCCGTCACTA
GTAGAATTAAATCGAAATTGTGGTTCCTTTCTTGCTACTGCTGCCACCGC
CGTACAGCCGCTGCTACAATACTCTGTCACTTGTAGCAAGAGAGATTCTC
ACTATTGTAGCAAGGTGATAGCCACCGGTAGGACACCGCTCACAACCCTA
TGTTTGGGCTGAATCGGAGAGAAAGCAACTGTGCATGAAATGTTGCCTAT
CGAGGAAGCCACAGCTGCTGTAGCTCCAAGTCTATGGTGCTAGGGTAGAC
TCTTTGACTGCCGGCTTGTTAACATTTTGGGCCCATGACGGAGCCCTACT
ACCGTGTTCCTAGTCTTGACATGAGCGTTTTCGGGGAATTGTCTACATGG
TCATGTCAGAAGGGCATAGGGTGGAGCGTCGCTCGCCCCTTGTCTGTACG
CCAGTAGTACATGTCTCTCTCGCATACATACAGCAGTGTGCGACACGCCA
TGTAGGCCGATTTTCACGCATCCACGATGGTAGACACCATCTTGTTCGTA
TGTACCATCTCCGTAGATATCACTTGCCACGAGCTGGGCGGCATTGAGAA
TATGTGCTAATCGGAAGCCTGTTTTTCCGAACTTGCATTGGACGGTGTCG
GATGTTGGCACCGTCACTTGGCGTGCTGCAGATCAATCGAGCTTTGAACT
TTGAAAAATGGCCAGGGGGGCGTGATAGTTTGCATCAGGTCACCTACATA
AAGCCCTACACTTTATAGTACCTGGTAGACTGTTTCGAGTATCATATGAT
AGTAGGCAACTGTGTCCTGTGTATTTGTGTAGGACATGCTCCTGGCGTCT
GCCGCGGTGTTACTCACAAAGTGTAGCGAACCAAGCTTTGGTGCTTTTCA
TTTGGTCATTTTGTCTCGACATGTCTTGGAACGTCTCAACGAGCGTTCCT
CTTTGCGTCTTCCGCGTGTTCTCTCTGTCTCGTGCGGCGTGGCCAACCGG
CACGGCAACGGCAGGCCCTGCTCTTCTCTCCCGAGCCGTACCTCCGGTCC
CAAGGGGTGCAGCACGTGGCCGTGTGGCAGAGCCGAGAACGCATTCCTCA
CACTGTAGAGACCACATCCCAGGTATGTACGATGACTCTGTCGATTAACA
ACCAGAAGGTTGAGTCCAGCCACACATGCGTCTGGCACGGTACGTCTAGT
AAAATAGACCGCAGTGCGGGAATCTGTTCCCCAGGAGCTTGTCTCGGTTT
TACTTAGAAGCCAGCGTGCGTTTGCCAGAATTTGGACGCCAGCCCAATGA
ATACGCCACGGCCCCATCTGGTGCCCGGCAGGCGATCTGTACTGGTATTG
TGGTTGTGGAGAGGTTGGAAACCAGACGAGAACGCCACCGTACTCCATCG
AGACACGCGTCACCTGTAGTCTACCTCACTTATCCTCCAGGGGAGACCTC
GCGTAGTCACGAATGTCAAGCAGGGCTATATATGGGTTTGTGCTGCTTCT
GCCCCGGAAACTCCGTTTTTCATGGCTCTCAAGGAGCACAAGCACCCTCT
ACTTGCGTCGCGTCATCATTTCCCTTGCTTTCCGTTTCAACCCCTTCCTG
GACCCACACAAGCCTTTTCCGCAGTCCCGTGGTAGAATACTGCAAAAAAT
TAACAACGAGGTACAGCAGTAGACGGCAGAATCGTCCCGCTACGACCGTC
TCAGCCGCCGCATGGCAACAGAGTAAGTTGTCTGGTCTAAACGTTAGTCT
ATCCCCTTTCGTTTTCCTCGTGACAGCTGGTGGAGGCCCGGCTGAACGAC
GTCGGGGCGGCGGGGGGTGGGCTGGCGATGAACGGGGCTCGGAGAAGCGA
AGAGGAGCTGCGGCTGATCTACAGCGCGGTGGTTGTGCGAGCGGTCAACG
GCCTCACGGGGCACGAGCAAAAGGTGCAGGAGGGGCAGGCGATCAACCAA
TCGGTCTACTTCTTGAGGGGAGTTGGAAACCCCACTTGGCTTACGGAGTA
GATCAGTTCGACACCGATCTGGCGCCTAACCCCCTCCCTCATCGCCGAAC
TACTGCTGTGTCCTGTTTTTGTATTAAACAGCGCATTGTGCTCGTGTTAT
TGAAAAATCAATCTTGGCTTACCTGTCGCCTCGTTTTTTTTAGGGTTTGG
CCACCCCGGAAAGTTAAAAGGGCGGCCGTTTTTCAACCTTTTGTCTACGA
ACTAAAGTGCATGTGTTTCTGTGGGGCTCAACTCTCAACTCTTAACTCTT
TGCTCCCGGCGCCGTCTGACTGACTTGACGTTCCACCCCAACTCCAACCC
CGATCCCCACCGCCCCATGCGCCGTGTACGCGAAATTTCAAAAAATAAAA
GTCGACACACGCCGCGCCAGTCTCTTCTCTGGCGAGGGAGATCGGGCTCC
CGACATGGATAGTCGACATCCGCCACGAGGCCGCGCACAAGCAGGTGAGA
GAGGGGCGTGTTTTTTTGTGGTGGTTGGTGGTTGTGCTGCGCCTGTCTTG
TCTCGTCTTGTCATTGTCATTGTCTTTTGCTCGCATCGATTCTTCTCTGC
GATCGAAGCCTCATGCACGGGGCGGGGCGGAACGGCCCCTGCCTGCACAG
GCTGTATCTTGGTGTGAATACACTTTTTATGTGCCTTTTGTTGTAAAAAA
AAACATACCTGTGGGAGTATACCTTGGCCTTGCGGGCGGGCGCCTCTCCG
GGTTTCTGTCATGTCGCGCTGTTGCTGTTGTTTCTGGTGTCGCACTGCAT
GCAGTATTGCAGTACGGCATGGTGCACCGCTGTTCTGTGGGCGGCCTTTC
CTTGAGCTGCTGCAGAGCAGGAGATCGCGTGCAAGTCGTACGTATTGTAC
CTCGCTTGTTGCTTTCGTTCCCACCCGCCCACAACAAACCGCCATTCGAA
AACCTCATCTGTTGGTGTTGACGCGCTTCCCGTGTTCCTGCCATGCCATG
CCATGCCATGCCATGCCATGCCACGCCACGCCACGCCACGCCACGCTCCC
GCCGGATGCGCCGCTTTTCTACGCGACCCCCCAAGTTGCCGGGAATCGTC
ACGCTCAGGATCGCGTCGGATTTCCTGGTGGATTACCTCTGGAGGCGGTA
CTGGGGTCCTCAGGCGGAGCACCTCGGGTTTGTGTGGGGAGCCTTCGACC
AGCTCATTTCCAGGTTTGGGTGGGGGGGGGTGGGAAGATGGATGCCTTGT
TTTTCGGTCTGTTGGGGGTGGTGTTGTGGTTTTCGCGCTCGGTTGCGCTA
CAAAAGTTTCTCCTTGGCAACTTTTTTGTTGTCAAATATCCCGCCTACAG
CAGTAGTGCAAAGCTCATCTTGTCTTTGTTTTAGTTGTTTCTGGGCGAGG
GCTTTCCCGAAGGGCCCGAAGGGGGTGGGTGTTGCTGCTTGAACAGCCCA
GCCGGATGCGGTTGTTTTGTTGCTGCTTGAACAGCCGGTTGGTGGTCGGC
CGCTAGGGATGTGTGAAGTTGTGCATCGGGCCCTTTGTTCCCTGCTGAGG
TTGGCAGAAGGCGGCAGACGATCGAGTTTTTTGTGCATATTGGGTTAGGT
TGTATTTCTGACGTATGTAAGGGGTGCTCAATATTCTACCGGCTGTGGTT
CGCCCCCAAAATACTTGTCTAGACTATTAGCTTGAGTCGGCGCCACTGCA
AATCAAAACGTGTCCATTTCGGATTAATTGCGCATTGGAGGTGTGGAGGT
GTGTTTGTATTCTCCCGCCCCCCTTTGTTCGAAAGAGCGGCTGGCGTAGA
CCGCACAGGCCACTTTCCGGGCCATCACACGTACTACCATTGGCGTTGCC
TTCTTTGTGTCTTACATCGTGCGGAATATGGTGCATGAGTGCTCTCTATC
CTATCTCTCTCCCCTTCCTCTTGCATGGTGATGAGGTACAACAACACACA
CGGTTTCGTGCCCGGTTCCCTCTCCAAGAAACCAATCGGCAAGAAGCCAA
ACAGCCCCGTCCCCAACTCCTTCCTCCTCCCCTGATGACAAATTTCGGTG
GCCTCGTCCTTCCCCCCCCTTCCCTGGCCCGGACTCGACCCGTCCACACC
TCGTCTGCACGCACCAGATACAAAGCTACGAGCGAAAGCGACGCCTCGCT
ACCGTCCAACTCCTCCCCCGGCAACGCGGGCCAGCGCCACCGCCGTCCCC
CCGCCTCCCCAGCCCCAGCGACCAACAAGAAGCGGCGGACCGGTACCTCT
TCGACCAGCGGTTCCGAAACCCCCGGTCCCGTCGAAGACAACCCGCCCGC
CGGGGGCGTCGCCGACGGAAGCTCCACCTCCAAGACCCCCCGCAGTAGCT
CGCGCGGAAACACGGCGCCCCCGGGGTCGGCACCGTCGGCGTCGTCGGCA
TCGAAGCCCGCCGCCCACGGCGCCGCCGTCGCGACGGAGGTCGCCGCAAA
CGAGATCGCCCTCTCCGCGACGCCTACCGCGCTGTCCTGGGCGCTGGTTT
CCCTTCTCGCGGACGGCGGGGTCGGGGCCGGGAGCGGCGCCGATGGACTC
GCCGGGGGCAGGAGAAGAGGGCAGGGGCATCTGCTTCCTCGATCACGGGA
CAAGTACCCGACTCCGGTGAGAAGCGGGGGAAGGGTTGGTGTGGGCATTT
TTTGACTGGAAAAGCTGCTCGGTGCCAGGTTTTCTGTCGAGACCGATTGG
GCGTATGTATGTACGTCGCGTCTTTCTCCGATATCGGACAGAAGTTTTGT
AGTTCCCGGCTCACGGCATCGCGCCCGGCATCTGCTCGCGTGGGCGTGTG
TTTCTGCTGTGCCGCTATTGCTGTTCCCGGTGTGACTGATCGTTGCTGCT
CGTCGTGTTCACGCCCTCACACCCCTGTGGTTGCGCAGGGAAGCCCAGGA
GTTGACGCCAAGGAGGTCGGCCGCCGGATAACTAGCAGGTAGGCAGGCGC
CGGCTTTCGTTGGGGAGAAGCAGTTGTGTTGGTCGAGGTTGCTTCGTTTG
GACGGTGAAAGATTAAGATTGGACAAAATGCAACAGCAGTTGCAGCAGTT
TACCGCTTTTGCTTGGTTCGCACCTTGAGAATTTGATGCTGTCTCAACTT
TGATAGCTAGCTATTGTTTTTCATGCTCGGAAGTGGCAGAGGGGGTTGCG
TGCTTCGCGCTCGCTGGCCGAACCCCCCTCGTATGAATGAGCGACGGACC
GGAGGGCCAGGAGTCTGGTTTATCCACAGCGCCGAGACGTGTGTCTGTAA
ACCTTTTATCCTTTTATATGGTCCGCCCAGGACAATTTGTCCATTTTGAT
TGTTCGCTATAACTTTCGAAAAAAAACGAATTGAAAACTGAAACAACTTT
GGCCGTGACGGCGACGTCGAGCTGCGTCGATATCCGGTGAGTTTTTGATG
TTCGGACGAAATGCAACATTTTCGACCAAAATGATCCACGGAACCCCTCC
CCCGCCCCTCCACGGGGCCCCCTAACCACACCACGGACCCCCCACAATCA
TGCGACGAATACGATTACAGTCACACAGCACTCAAAGCACCCACCACGCA
CCCTCTAAACGACAGTTACTGCGTCGGTTAGTCCTCGTCGTGGTCGTCGG
TTGGTTCGTCAACATCTTCCGTCATGGGAGAAAAGGTGCTGTCCTCTAGT
GGTGTTGGTGGTGCATCGCCAGAGTCACGGCGGCCAAAAAGGCCATTGGC
CCGGGCGCGCTTTCGTGGTCTGCCCTTTCCCTTTTATCCCATGACTGCTG
TGGGTGCTGAGCGCCGTTGCAGGGCGTGAGGGCGTGGGGATTGCGCCCTC
GCACAAGGGCTAATTTATGTGTGTGGTGTATGAGGCAAGAAAAAAAATGG
CCTCCAGCCGCCAGCGGCAAAACAAAATACGGAATTTCTCGCAGACCAGA
TTTTTATTTGAAAATCGGAAAAAAGTTCCGTCTGGGGGATTTCAAGAGGA
ATCGTTTGCCGTGGTCTATTTTAAAATCGTAGGTTTTATTATCATAGGAA
AAAGCGAACAAAATGGGCTCTAAAATCCAGTTTTTCGCCGATAATATCTT
TGATTTTTATTTAAATCAAAATCGAAAAGAAGTTCCGTCTGGGGAATTCC
CAGAGCTGTCCAAATCCGATCTCTGAATTTTGTTCTGAGAAAAACACACC
CCAGGAAAAAGCGAACAAACTTTTGCAGTTATTTGCAAATGAAAGAAAAT
CAAGAACAGAAAAAAACGCTTTCCACAGGGACACGCGCCTGGAAACAGGG
CGTTTGCCGGTACTTTCGGTTTTCGGAACAACCACCTGTGTGCAGATAAA
AGTGCACATAAGTGCAGGTCGGAATTGTGGACAATCGGTCCTGGACTGAT
CATACATTGTAAATTTCACGAGAGCGCACCATTTCATTTTCTCTCGAGCG
CTCACAGAGTAGTAGAGCATTGGCCCTCTCTAGAGCTGGCTAATATGCCT
CAAGGACGATTTGAAGGCGTTCGGGGCCACGCACGGCTCCACGGCCGACG
AACCGTGTGTCTTCGGAGTCCCTAAATTAATTTGGGCGGAGGCGGCGAAG
GTGTAGAGGGGAGTACCGTGGCACGCGGGGGTGCTGCAGGGAGCCGAGAG
GTTTATGACCTCTTGGCACAAGGACGAGGAGGAGGCGAGCCGACAACGCG
CCACCAAGCGAGGAGACGACGGGCCCAGAAATAGTTTAGACACGGCGCCA
ACCAACGGGACGGGAGGGGGGCGGAAAGAAACGGCGAGGGAAGAAAGCAA
GCGAGAAGAGACCGACCGGGTGGCGCGATATTTTTTTTATTTTTTTATTT
TTTTATTTTTATGTGACGGGTTGAACCTAGTGACTATTTTTTCCTTTTAC
TTTCCCCTCTCCCCCCCTTTTTCGCTGCACCATTACACTACCCCCCCGGG
GAATGATGTCGTGTTTAGATGATATCTTTCCGGGTGTGACTGTCCCTCTG
CGTGTTGGATGTGTTATTTTTGTCGACATGTCTCCTTGTCTGCTTCCCTT
GTAACATATATATATATATATATGCACCTTAGTCGGTGGAGAGGGATCCG
ACTATGTATTTGCCTTGCCGGGGGAACTGGGACGGAACACCCCGGCTTCG
TAGGGGTAGCAAGATAGAATCGGGAGGTTATACCCCTGGTTGGTGATGCT
GGCGCTCCACTATTGTTTTATTTTTATTTTTGCCTCACATAGCGTGTAGA
GGGGAGCGGAGGGCTCCAGACTATTTGTTTCCTGATTCTTTTATTTTTCT
CGTATTTTATTGCTCTGCTGGCCCTTGGGGTCCGTTTTATTTTTCAGTAT
ACCTTTTTAGGTAAGTTAGCTTGTGACCACGGAAATTGGCCGCGTCAAGT
GATGGATTAGTACGGAGAGGTTGAGGCAGAAGGAGGTACTGGATAGAGAC
GGGACCGGGATGGTTTTTAATGTGAAGACAACAACAACAACAAGAGCGCT
TCGACGGCCCCATATCATGTTTACTTTGATTAGACTATTGGTTTCTGCGT
GCCACTGGTTTCGCTTTTCATTTTCCGGTCGGGCCCCTTTCATTTTCGGC
TTGATATATAATTTATCTACTCTTCCTTCTTCCCCTCGCTGCCTTGGCAA
GGCTTTGGCCTAGGCATGGCCTACAGCGAGGGGGGGGGTCTTTCTAGCGA
GCAAGGCTAGACTCACCCTCAAGGAGCCCGATACCTTCTTGCTGCCGCGC
ATCCGCCGTGAGGCGTGCGCAGTGGTAGAGTTGGGTCGGCACTGATGGGT
CAGGCACAAAAGTCCAGAGGTGCGCGGGCCTTTATGGCCGTCGGTGTAGG
CAGCAATGCCCATCTCACTTTTGTGCGCGGAGGCAGACACCATCAGGGGT
GAAAGGACACTATGTACACGGCCCTAGGTTTGCTAGAGGGAGCTGTATTG
TCTGAGTTACCAGGCTTCGCCACCAAAGGAGGAGGGAGCTGGTGGTGACG
AGCTGATTGGGGGTGGTTGACCCCTTTGGCGCGAGAATTTTTGTTTCAAG
ACCAAGAACCTTGAGTACAACGAGGGAGAAAGCGAGGAACCGACTGGGAA
GGACGACAACGAGAGCATGTACGGACGGAGCGGGTCGAGTGTGGTCATGC
TACTACAGCGTCACCGGCGACATCGGCTCAGCGTCACCGGAGACATCGGC
CCATGGCGACGGACAAACATTTTGTGACTGTCAATTTTTTGCGTTTTCTT
CCCCTGTATCGGTGCTGGGTGTGTGTGTGACGTCTGCACTGGTTTTGTAG
AGAGATGCGTCAGAGATGGCGTGATACCCCAGGTGCCTTTTTTGGGTAAA
ACCTGCATCGTGGAAGACCCCTTTAGTGTGGAACGATTTCTTAGTCAGTG
TCAGTGTTACACTGCTGCACCCAACCGAGACGATCGGGATCGATTCGTGG
GTGATTGTCAAGTGCAAGATGGCTTTGGTTGTTTGTTCTCTTTCACTGTA
TGTCCGCGGACACATTCTGACAGCACTTCAGACGGCAGCCGTGCTCCGCC
AGCTTCTTGTTCCACGTGCCTACCATTGTGTTTGTACAGACAGCACTCCA
GACAGCAAATCGCTGTAGTCGGCAAAACGTTTTTTGGTAGAGAGTGAAAC
AGGGAGGGGGTGATGCTGCTGTAGTCGAACGGTGGGGCGGACGTGTAGGT
CAGTTGTGGACACGCATAGGTGTGCAGGGATTAGATGTACCTCTTCGGGC
TTGTGTACCTTTTTTCGCTGCTAGATGTGCGTTCCTTTAGATCTTCTGAT
GGCTCTAGTACTTTCGTGACCACGGGCTGGAGCATTTGCTAGATTTTGGC
ATTTACAACTGACATCCGGTTTTATGTGAAGTTAACAACAACAACAACAA
CGACCTCAAACTTCAACTCTCAAGTTTCCTCAACGGCACGACTCTTCCAA
TGGACACACATCTTGGAATATATCCAATGAGCGTGGCGGGCGTCAGCCGT
CGAAAACCTTGTAGATTCTACACTTATACTTTGTACAGGTGTCACCTCTT
GTTGTAGGCAACTACTCCGTATTATAGTGGGATGCTAACGTAGCTCGCTT
TATATATGAGGTGTCCTTCCAAGACACACACCCCACGCGCATCGCCCCGC
GTCTGGCGCCTTGCTCTCCCCGTGGCACTCACCTCCTTTCACACGGATAC
CACGGTAACCTTTGCCGTGTACTCTGATCTACAGGTGGGCGACCCTCCTT
GGCATGTTCCATGCTAAATGGCGAGGCTTTGGAGCCGCGCTGTTGGTTCG
CCTGGTGGAAGCGCTTCTCAACAACGCGGAATCACTGTCACCATTATCGC
CACCGCCGCCGCCACCGCCACCGCCCAACGCCGCCGCCCACCCGAGCGGT
GCTGGCACGAGTAGTGGTGGCGGTGGCGGCGGCGGCGGCGGCGGTGGGTT
GGAGCGGCAGGCTGCCTTCATTGAGATCTGGGTTCGGCATCTGCTGAGTC
GCCGGTGGCATCTGCGCGGTTGCGATGTGAGTAAAGGGAACGCGACCGGC
GCTGCGCTTGAGTTGCAGACTTTTTGTGGAAGGTGATCTGTACACGCTGT
AGTTTACACTCCGCCCACCTCTCCTGTCCGCCATACCTTTCCAGGCAAGG
ATACGAAGCCGCCTGCGGGAGACGGCGGCTGACGCCGGCTTGTCGCCAGC
TTTTTGCGACGAGCAGGAGGGATCGTGGGACGGAGAGGAGAGCGCCTGGG
CGGGCAAGCCAGGTGAAGTCATCGCTACGCTATATTTGCCTTCTTTCATG
CGTTTCCGGAAATAGCAGCAGTGTCAAGGGACGGATCAAACTGGCGTGAG
GGTTTCTGCAGGAGTTGTGTTGGTTTTTTGCTGCTTCTGCGGATGGGTTC
CCTGCTGCTGATGATGATATGTTTCGTACTTTATTGCCGTGGGCACGACG
CACCTATTTAGTTCAAGCATGTACGACGGAAAGCTCGAGAAACGCTCCGG
GCGGAGGGGGGTTGTGTGCAGGAGATGGTCGCTATCCCGACCAGGCTGAA
ATTGTGCAAAGCGAAAAGTCTCCCTAACTCGCTCTCATCGCTCATATCCT
ACATCACCGGTACCGGTGTCGAACCCCAATCGCATCTAAATTTCAAGCAA
AAGTTCGTAAGTAGATGAGTGGAAAGACAGCAGCAGTTGGGGACGGAACA
ACTTTGAAAAGTCGTTTGCGTTTCGGTGTCCCGTGTCAGGTTTCGACAGC
GACTCGTCATCACCAGATTTGTTGTAGTCGGCTGATCGTCACATGCCTGG
CGTTCTTTTCGCGTCAGCCACAAGTTGTGCGGACTTCCTCCGCCCAAACC
TGGCCGCTCTCGCCTTGCTGCGAGTAACACGTTTCCTGCATCTGTCGCGT
TGATGCCGCCGTACCCGTTGCTTGTTTCTCGCAGCCCCCCTCCCAGTGCT
CCGCGCGGCGTTCTTCCCTGTGCGAGAGCTGCTGGAACGCTGCCGCCGTT
TGCTCGAAACCTTGCCGATGGTGGTGGCGGCACCAGCGGAAACACATCCA
CCGCCTACCGCCGCAGCCGTCACAGCACGCGTTCTCGGCGACGACGGCAT
CAACCCTGCCGGGGGAAACACCCCCGCGCCTTCAGCGACCTATGCATGCG
GCGCTAGCGTAAGCAAGGCGCACTGGGCAAGGGCAGGACTTGGCGCGGTC
TGCCGCGCACTTGCCGAGTCGCTTCCTGGAGAGGACGCGACCTCTGCCAA
TGAAGATGCCGCCGCCGCCGCCTCGGCAGCAGCAGCAGCCGGCGACGAAG
CTGGGGCAGAGGGCGGTGCGGTCGGGGACCAGAGCCCCTCATCGGTAAGG
CGAGAGGTGGGCTCCGTTGCATCGGGCGGCGTGGGTGATGGGGCTATTGT
TTCAGGCGAGGACGGTGGGGACATCGTGGGCGGCGGTGACGATGCAGAGA
GAGTCAAGAGCGCGGAAAGCACAACTGCTGCTGCTGCTGCTGCTGCTGCT
GCTGCTGGGAGCACGACAATGATGGATCTGGATGCTCTCGAACGTTTGCT
CGGTGCGGACGGGTCTTCACCACCTTGCTCAGCAGTGTCCCGTGAGGGGA
ACGGGAGTTTTCCCTCGGCGTCGGTCGGAGCGGTTGATGATGCTGCTGCT
CGCGTGGCTGGCGCGGCAGGGGGGTCGAGGTTGAGGGGGGATGCGCCGGT
GGAAGTAGTGGGGGTTGGCCGTGCGCCGGCTGCTGATGGGGGCGGTAGCG
CGTGGGAGGTGGTGGGAACATGGACGCCGTGCGCGATAGGCACACTCCCG
GGGTGGTCAGCTGCGCGCCTTTTTTAG
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Coding sequence (CDS) from alignment at C-linearis_contig74:306819..318295-

>mRNA_C-linearis_contig74.15004.1 ID=mRNA_C-linearis_contig74.15004.1|Name=mRNA_C-linearis_contig74.15004.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=4830bp|location=Sequence derived from alignment at C-linearis_contig74:306819..318295- (Chordaria linearis ClinC8C monoicous)
ATGAGTAGAGCTTCCCGTACCGACGCTGGGTTGTGCATTCCCCGGATGGT
TCCATGGCGAGACTGGGATGAGTGGTACCGGGTCAAGATGAGTAGAGCTT
CCCGTACCGACGCTGGGTTGTGCATTCCCCGGATGGTTCCATGGCGAGAC
TGGGATGAGTGGTACCGGGTCAAGGCCCTGCTCTTCTCTCCCGAGCCGTA
CCTCCGGTCCCAAGGGGTGCAGCACGTGGCCGTGTGGCAGAGCCGAGAAC
GCATTCCTCACACTGTAGAGACCACATCCCAGGCCCTGCTCTTCTCTCCC
GAGCCGTACCTCCGGTCCCAAGGGGTGCAGCACGTGGCCGTGTGGCAGAG
CCGAGAACGCATTCCTCACACTGTAGAGACCACATCCCAGCTGGTGGAGG
CCCGGCTGAACGACGTCGGGGCGGCGGGGGGTGGGCTGGCGATGAACGGG
GCTCGGAGAAGCGAAGAGGAGCTGCGGCTGATCTACAGCGCGGTGGTTGT
GCGAGCGGTCAACGGCCTCACGGGGCACGAGCAAAAGCTGGTGGAGGCCC
GGCTGAACGACGTCGGGGCGGCGGGGGGTGGGCTGGCGATGAACGGGGCT
CGGAGAAGCGAAGAGGAGCTGCGGCTGATCTACAGCGCGGTGGTTGTGCG
AGCGGTCAACGGCCTCACGGGGCACGAGCAAAAGTCGACACACGCCGCGC
CAGTCTCTTCTCTGGCGAGGGAGATCGGGCTCCCGACATGGATAGTCGAC
ATCCGCCACGAGGCCGCGCACAAGCAGTCGACACACGCCGCGCCAGTCTC
TTCTCTGGCGAGGGAGATCGGGCTCCCGACATGGATAGTCGACATCCGCC
ACGAGGCCGCGCACAAGCAGTTGCCGGGAATCGTCACGCTCAGGATCGCG
TCGGATTTCCTGGTGGATTACCTCTGGAGGCGGTACTGGGGTCCTCAGGC
GGAGCACCTCGGGTTTGTGTGGGGAGCCTTCGACCAGCTCATTTCCAGTT
GCCGGGAATCGTCACGCTCAGGATCGCGTCGGATTTCCTGGTGGATTACC
TCTGGAGGCGGTACTGGGGTCCTCAGGCGGAGCACCTCGGGTTTGTGTGG
GGAGCCTTCGACCAGCTCATTTCCAGATACAAAGCTACGAGCGAAAGCGA
CGCCTCGCTACCGTCCAACTCCTCCCCCGGCAACGCGGGCCAGCGCCACC
GCCGTCCCCCCGCCTCCCCAGCCCCAGCGACCAACAAGAAGCGGCGGACC
GGTACCTCTTCGACCAGCGGTTCCGAAACCCCCGGTCCCGTCGAAGACAA
CCCGCCCGCCGGGGGCGTCGCCGACGGAAGCTCCACCTCCAAGACCCCCC
GCAGTAGCTCGCGCGGAAACACGGCGCCCCCGGGGTCGGCACCGTCGGCG
TCGTCGGCATCGAAGCCCGCCGCCCACGGCGCCGCCGTCGCGACGGAGGT
CGCCGCAAACGAGATCGCCCTCTCCGCGACGCCTACCGCGCTGTCCTGGG
CGCTGGTTTCCCTTCTCGCGGACGGCGGGGTCGGGGCCGGGAGCGGCGCC
GATGGACTCGCCGGGGGCAGGAGAAGAGGGCAGGGGCATCTGCTTCCTCG
ATCACGGGACAAGTACCCGACTCCGATACAAAGCTACGAGCGAAAGCGAC
GCCTCGCTACCGTCCAACTCCTCCCCCGGCAACGCGGGCCAGCGCCACCG
CCGTCCCCCCGCCTCCCCAGCCCCAGCGACCAACAAGAAGCGGCGGACCG
GTACCTCTTCGACCAGCGGTTCCGAAACCCCCGGTCCCGTCGAAGACAAC
CCGCCCGCCGGGGGCGTCGCCGACGGAAGCTCCACCTCCAAGACCCCCCG
CAGTAGCTCGCGCGGAAACACGGCGCCCCCGGGGTCGGCACCGTCGGCGT
CGTCGGCATCGAAGCCCGCCGCCCACGGCGCCGCCGTCGCGACGGAGGTC
GCCGCAAACGAGATCGCCCTCTCCGCGACGCCTACCGCGCTGTCCTGGGC
GCTGGTTTCCCTTCTCGCGGACGGCGGGGTCGGGGCCGGGAGCGGCGCCG
ATGGACTCGCCGGGGGCAGGAGAAGAGGGCAGGGGCATCTGCTTCCTCGA
TCACGGGACAAGTACCCGACTCCGGGAAGCCCAGGAGTTGACGCCAAGGA
GGTCGGCCGCCGGATAACTAGCAGGGAAGCCCAGGAGTTGACGCCAAGGA
GGTCGGCCGCCGGATAACTAGCAGGTGGGCGACCCTCCTTGGCATGTTCC
ATGCTAAATGGCGAGGCTTTGGAGCCGCGCTGTTGGTTCGCCTGGTGGAA
GCGCTTCTCAACAACGCGGAATCACTGTCACCATTATCGCCACCGCCGCC
GCCACCGCCACCGCCCAACGCCGCCGCCCACCCGAGCGGTGCTGGCACGA
GTAGTGGTGGCGGTGGCGGCGGCGGCGGCGGCGGTGGGTTGGAGCGGCAG
GCTGCCTTCATTGAGATCTGGGTTCGGCATCTGCTGAGTCGCCGGTGGCA
TCTGCGCGGTTGCGATGTGGGCGACCCTCCTTGGCATGTTCCATGCTAAA
TGGCGAGGCTTTGGAGCCGCGCTGTTGGTTCGCCTGGTGGAAGCGCTTCT
CAACAACGCGGAATCACTGTCACCATTATCGCCACCGCCGCCGCCACCGC
CACCGCCCAACGCCGCCGCCCACCCGAGCGGTGCTGGCACGAGTAGTGGT
GGCGGTGGCGGCGGCGGCGGCGGCGGTGGGTTGGAGCGGCAGGCTGCCTT
CATTGAGATCTGGGTTCGGCATCTGCTGAGTCGCCGGTGGCATCTGCGCG
GTTGCGATGCAAGGATACGAAGCCGCCTGCGGGAGACGGCGGCTGACGCC
GGCTTGTCGCCAGCTTTTTGCGACGAGCAGGAGGGATCGTGGGACGGAGA
GGAGAGCGCCTGGGCGGGCAAGCCAGGCAAGGATACGAAGCCGCCTGCGG
GAGACGGCGGCTGACGCCGGCTTGTCGCCAGCTTTTTGCGACGAGCAGGA
GGGATCGTGGGACGGAGAGGAGAGCGCCTGGGCGGGCAAGCCAGCCCCCC
TCCCAGTGCTCCGCGCGGCGTTCTTCCCTGTGCGAGAGCTGCTGGAACGC
TGCCGCCGTTTGCTCGAAACCTTGCCGATGGTGGTGGCGGCACCAGCGGA
AACACATCCACCGCCTACCGCCGCAGCCGTCACAGCACGCGTTCTCGGCG
ACGACGGCATCAACCCTGCCGGGGGAAACACCCCCGCGCCTTCAGCGACC
TATGCATGCGGCGCTAGCGTAAGCAAGGCGCACTGGGCAAGGGCAGGACT
TGGCGCGGTCTGCCGCGCACTTGCCGAGTCGCTTCCTGGAGAGGACGCGA
CCTCTGCCAATGAAGATGCCGCCGCCGCCGCCTCGGCAGCAGCAGCAGCC
GGCGACGAAGCTGGGGCAGAGGGCGGTGCGGTCGGGGACCAGAGCCCCTC
ATCGGTAAGGCGAGAGGTGGGCTCCGTTGCATCGGGCGGCGTGGGTGATG
GGGCTATTGTTTCAGGCGAGGACGGTGGGGACATCGTGGGCGGCGGTGAC
GATGCAGAGAGAGTCAAGAGCGCGGAAAGCACAACTGCTGCTGCTGCTGC
TGCTGCTGCTGCTGCTGGGAGCACGACAATGATGGATCTGGATGCTCTCG
AACGTTTGCTCGGTGCGGACGGGTCTTCACCACCTTGCTCAGCAGTGTCC
CGTGAGGGGAACGGGAGTTTTCCCTCGGCGTCGGTCGGAGCGGTTGATGA
TGCTGCTGCTCGCGTGGCTGGCGCGGCAGGGGGGTCGAGGTTGAGGGGGG
ATGCGCCGGTGGAAGTAGTGGGGGTTGGCCGTGCGCCGGCTGCTGATGGG
GGCGGTAGCGCGTGGGAGGTGGTGGGAACATGGACGCCGTGCGCGATAGG
CACACTCCCGGGGTGGTCAGCTGCGCGCCTTTTTTAGCCCCCCTCCCAGT
GCTCCGCGCGGCGTTCTTCCCTGTGCGAGAGCTGCTGGAACGCTGCCGCC
GTTTGCTCGAAACCTTGCCGATGGTGGTGGCGGCACCAGCGGAAACACAT
CCACCGCCTACCGCCGCAGCCGTCACAGCACGCGTTCTCGGCGACGACGG
CATCAACCCTGCCGGGGGAAACACCCCCGCGCCTTCAGCGACCTATGCAT
GCGGCGCTAGCGTAAGCAAGGCGCACTGGGCAAGGGCAGGACTTGGCGCG
GTCTGCCGCGCACTTGCCGAGTCGCTTCCTGGAGAGGACGCGACCTCTGC
CAATGAAGATGCCGCCGCCGCCGCCTCGGCAGCAGCAGCAGCCGGCGACG
AAGCTGGGGCAGAGGGCGGTGCGGTCGGGGACCAGAGCCCCTCATCGGTA
AGGCGAGAGGTGGGCTCCGTTGCATCGGGCGGCGTGGGTGATGGGGCTAT
TGTTTCAGGCGAGGACGGTGGGGACATCGTGGGCGGCGGTGACGATGCAG
AGAGAGTCAAGAGCGCGGAAAGCACAACTGCTGCTGCTGCTGCTGCTGCT
GCTGCTGCTGGGAGCACGACAATGATGGATCTGGATGCTCTCGAACGTTT
GCTCGGTGCGGACGGGTCTTCACCACCTTGCTCAGCAGTGTCCCGTGAGG
GGAACGGGAGTTTTCCCTCGGCGTCGGTCGGAGCGGTTGATGATGCTGCT
GCTCGCGTGGCTGGCGCGGCAGGGGGGTCGAGGTTGAGGGGGGATGCGCC
GGTGGAAGTAGTGGGGGTTGGCCGTGCGCCGGCTGCTGATGGGGGCGGTA
GCGCGTGGGAGGTGGTGGGAACATGGACGCCGTGCGCGATAGGCACACTC
CCGGGGTGGTCAGCTGCGCGCCTTTTTTAG
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