mRNA_C-linearis_contig111.1488.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig111.1488.1 vs. uniprot
Match: A0A6H5JRL3_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL3_9PHAE) HSP 1 Score: 500 bits (1287), Expect = 2.140e-146 Identity = 515/1243 (41.43%), Postives = 603/1243 (48.51%), Query Frame = 3
Query: 879 MASDLNGRSDPYVKLCLTGRYLSTGQEWSEKLRLRKRTKIIKYSLNPVWDEEFSMPVRRSGAVLKIEVWDWDRSSSDDPLGHFEVSIGEELLSQQPLDMWYVLEAPRGKAAAAQAAAEKRPRRQKAGLAEGSKANKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDELPDSP-------------GSGYPASSLGDSSVSSKALVRRRSSGVEHADHSHESEEEKRACEACIKQRRKLFGEVRLVLWYQFDEFAEVCSHTWPEEPPKQVKTQFSPNELYRKGMICWQMAQPYVSFMVEADAIFCWERPWRSFMWMIALVVLLGVPPLLIVVINLALMRIVVSAYLKHRSGGDGIAAANHGPSARATAAGTAPLGQGSGHAXXXXXXXXXXLVASSFSPPAAGKADASSSQCVLGV----STSGESGKLTPPSTPTSGRHR-----SSSQSLFFSVAAFSSPSPPSPTADVDVFGNSAVPGAWAGAXXXXXEGGLQSAVSADGGGTSLSEAASDLSIVSSTRSQLNSKGSTRFPLLSRSLASRGGPGRRTSSGPTADASARAAHLGYSTGGRGIRNSSSAPSWYQSXXXXXXXXXXXXXXXXXXTAGQATAFFASGATPPATLPVXXXXXXXXXXXXXXXXXXXXXXXXHPNSAKMPSVSXXXXXXXXXXXXXXXGGMKSAAEAGSMKMKNLLP---RRDPELQALYSKLGSTKKVPAVVNEVGKRLLSKSGPSLQQGLENMGRNLIQIRQRFHPLQVKELVVAMTALVFHTVLQLWLYLTGRFNLYFVLLVVGQFMSQLYKRWGKAFVMAMKAARRSYRTRQALAHRISA----AXXXXXXXSLSNVSXXAAGDQAYSFSDGGAASTVVPNPFQFDAANPPAFAPPGATPAVEP----DPP--LGSENAAQQPSASLFARSPVRRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSGLLTPRGRRGTAPSPRATPLSSPTRPRSLK--------------------SEGTAAGRVS-----NLGGAASEASRSVRGGGGLSPRWRVPWAKKVGISVGRGGGDGGAGARGGNLPGDGMTLYEERKETGGGQGGDGGLASPVLPPRLRPRGGKRVTRRRVRWARVFGACVALIGALTMLTAAVSAYFFPGNGLESPFPPIPLPLG*GAAKLALLS-----LWQGEDGAM-------PGAKMATKW---RSRLQRSSFSFGESSGVDGGDGE--DEAADK 4376
MASD NG+SDPYVKLCLTGRYLS GQEWSE+LRL+ RT+IIK +LNPVWDEEF +PVRR+GAVLK+EVWDWDRSS DDPLGHFEV+IGEELLSQQ A+ SK N XXXXXXXX + P+SP G GY S S + +DHSH+SE+E RAC+ CI++RRK FGEVRL+LWYQ+DEFAE+CSHTWPEEP K K FSPN+LYRKGM+ W+M +PYV+F+ E DAI W RP RS MWM+A+V +L VPP+LIVV+N+ALM I VSAYLK XXXXXXXXXX A + + P + SS V S E G + TP G + S QSLFF A SSP P+ XXXX +S+ S++RSQ K ST LSR+L GRR S A+ +G ST G +RNSSSAPS T + + F AS P + N P V GGM SAA AGS K+K LLP RDPEL+ LY +LGSTK+VPAVVN++GK +KSGPS+Q GL+ MG LI+IRQRFHPL ++L V MTAL H VLQLWLY++GRFNLYFVLLVV Q +S LYKRWGKAFV+ +K ARRS RTRQAL+H +SA A XXXXXX XX N F FDAANPPAFAPPG TPA+EP D P XXXXXXXXXXXXXXXXXXXXXXXXXXXXX TPR R GT PS L SP R RS S+G+ + S GGA E R GGG RWR+ W K+ ARG ++E QGGD SPV P G + + R+RW RV GA VAL+ L L+A +F P ES P+P A +LS L G +G + GAKM T W R RL R S D GD DEAA
Sbjct: 1 MASDFNGKSDPYVKLCLTGRYLSHGQEWSERLRLKDRTRIIKTTLNPVWDEEFCLPVRRAGAVLKVEVWDWDRSSPDDPLGHFEVAIGEELLSQQEKXXXXXXXXXXXX-----------XXXXXXXRADASKGNGGGEEATAVDGGGDMDTVDDADXXXXXXXXGGEINSPPESPIGLGLDDGSGGGNGGGYSLSGXXXXXXXXXXXXXXXGS-MGPSDHSHQSEQEARACDVCIERRRKRFGEVRLILWYQYDEFAEMCSHTWPEEPLKPPKIVFSPNQLYRKGMVFWEMFKPYVTFLKEVDAINSWGRPRRSLMWMLAVVGMLVVPPVLIVVVNVALMHIAVSAYLKXXXXXXXXXXXXX------------XXXXXXXXXXXXXXXXXXXAEAPASTDPTSNDPSPSSLVTAPAVTDERSGGQEEGLSSLLGTPWLGDNAGTGGGSRRQSLFFLPAFASSPVSPARVGXXXXXXXXXXXXXXXXXXXXXEP---------------------SMSMRSTSRSQR--KSSTTLFSLSRTLTR----GRRVSDPDPVTANT----VGSSTAGVALRNSSSAPSRTAPWRAKAPRSAPPSTMTMPTTMARTSIFAASSGAPQSPFTPRDLSISNAAGSSSN------------NVNTGPGVGAGVSRDVVHAAGVAKGGMISAAGAGSKKIKKLLPVWGTRDPELRELYERLGSTKRVPAVVNQLGKVFFTKSGPSMQLGLDKMGVMLIKIRQRFHPLHARDLGVTMTALFAHMVLQLWLYVSGRFNLYFVLLVVSQSLSNLYKRWGKAFVLGLKEARRSCRTRQALSHAMSATAANAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTFMFDAANPPAFAPPGTTPALEPYHNGDGPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTATPRRRGGTVPS--LPVLVSPPRARSFAVFRGGSSSXXXGSGSARPGASDGSGRRQPSPESDVGDGGAGIEGQRRGGAGGGKPRRWRMLWGKRTKTGXXXXXXXXXLAARG-------------QEEADREQGGDLRSPSPVPPRGGNSHGVRARGKIRMRWGRVIGATVALVCGLAALSAVPGTFFSPPQ--ESVEEPVPSLAAIWQAVAVMLSGMRAFLSFGGNGGLGEAAWRVAGAKMTTVWGSGRERLWREGASAAAGYDDDEGDANNHDEAASS 1159
BLAST of mRNA_C-linearis_contig111.1488.1 vs. uniprot
Match: A0A6H5JW30_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW30_9PHAE) HSP 1 Score: 306 bits (784), Expect = 9.040e-85 Identity = 201/391 (51.41%), Postives = 253/391 (64.71%), Query Frame = 3
Query: 723 NAASLLSSVHGMTDFRLIPRWSFFTQPLREAEERMRTSIGTLYVKVVEGRGLMASD-LNGRSDPYVKLCLTGRYLSTGQEWSEKLRLRKRTKIIKYSLNPVWDEEFSMPVRRSGAVLKIEVWDWDRSSSDDPLGHFEVSIGEELLSQQPLDMWYVLEAPRGKAAAAQAAAEKRPRRQKAGLAEGSKANKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDELPDSPGSGYPASSLGDSSVSSKALVRRRSSGVEHADHSHESEEEKRACEACIKQRRKLFGEVRLVLWYQFDEFAEVCSHTWPEEPPKQVKTQFSPNELYRKGMICWQMAQPYVSFMVEADAIFCWERPWRSFMWMIALVVLLGVPPLLIVVINLALMRIVVSAYLKH 1892
NA L +G+ D+R I W F + L +A+ + SIG L+VKVVE RGLMA D + G+SDPYV L LTGRYLSTGQEWSE+LR+ RT+ IKY+LNPVW+E FS+P+RR+GA+L++E+WDWDR S D+ LG EVSI +EL SQ+ +D WYVL+AP + A + R LAE ++ XXXXXXXXXXXXXXXXXXXXXX SSL +SV L R+ ++ + DH H EE +CEACI+ RRK FGEVRL L +F+EFAE CSH WPEEPP+ + FSPN +Y M+ Q+AQPY+ M A AI W PW+S W +ALVV+L P LL+VVIN ALMRI + YL+H
Sbjct: 29 NADELYEERYGVKDYRSIKPWMFPARVLLKAKRKATISIGVLHVKVVEARGLMARDGMLGKSDPYVNLALTGRYLSTGQEWSERLRICDRTRTIKYTLNPVWNETFSLPIRRAGAILRVELWDWDRGSCDESLGSVEVSIDKELRSQKTIDTWYVLDAPWDLKDSPSAVPDAHISR----LAELEAFSEMEEEXXXXXXXXXXXXXXXXXXXXXX--------------------SSLRWTSV----LGRKGATAEDRIDHDHGPREESPSCEACIEVRRKRFGEVRLQLRVEFNEFAETCSHLWPEEPPEPAEMTFSPNRVYYNAMLLRQLAQPYIGCMQGASAIVHWVHPWKSLAWFVALVVMLLHPCLLMVVINGALMRIAIRGYLEH 391
BLAST of mRNA_C-linearis_contig111.1488.1 vs. uniprot
Match: D7G4V0_ECTSI (Protein kinase C, beta 1, like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4V0_ECTSI) HSP 1 Score: 291 bits (744), Expect = 4.170e-82 Identity = 193/391 (49.36%), Postives = 237/391 (60.61%), Query Frame = 3
Query: 723 NAASLLSSVHGMTDFRLIPRWSFFTQPLREAEERMRTSIGTLYVKVVEGRGLMASD-LNGRSDPYVKLCLTGRYLSTGQEWSEKLRLRKRTKIIKYSLNPVWDEEFSMPVRRSGAVLKIEVWDWDRSSSDDPLGHFEVSIGEELLSQQPLDMWYVLEAPRGKAAAAQAAAEKRPRRQKAGLAEGSKANKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDELPDSPGSGYPASSLGDSSVSSKALVRRRSSGVEHADHSHESEEEKRACEACIKQRRKLFGEVRLVLWYQFDEFAEVCSHTWPEEPPKQVKTQFSPNELYRKGMICWQMAQPYVSFMVEADAIFCWERPWRSFMWMIALVVLLGVPPLLIVVINLALMRIVVSAYLKH 1892
NA L +G+ D+R I W F + L +A+ + SIG L+VKVVE RGLMA D + G+SDPYV L LTGRYLSTGQEWSE+LR+ RT+ IKY+LNPVW+E FS+PVRR+GAVL++E+WDWDR S DD LG EVSI +EL SQ+ LEA +E + XXXXXXXXXXXXXXXXX SSL +SV L R+ ++ + DH H EE +CEACI+ RRK FGEVRL L ++F+EFAE CSH WPEEPP+ + FSPN +Y M+ Q+AQPY+ M EA AI W PW+S W IALVV+L P LLIVVIN AL+RI + YL H
Sbjct: 29 NAGELYEERYGVKDYRSINPWMFPARVLLKAKRKATISIGVLHVKVVEARGLMARDGMLGKSDPYVNLALTGRYLSTGQEWSERLRICDRTRTIKYTLNPVWNETFSLPVRRAGAVLRVELWDWDRGSCDDSLGSVEVSIDKELRSQK-------LEA----------------------FSEMEEETXXXXXXXXXXXXXXXXXXXT--------------------------TSSLRWTSV----LGRKGATAEDRIDHDHGPREESPSCEACIEVRRKRFGEVRLQLRFEFNEFAETCSHLWPEEPPEPAEMTFSPNRVYYNAMLLRQLAQPYIGCMQEASAIVHWVHPWKSLAWFIALVVMLLHPCLLIVVINGALIRIAILGYLDH 360
BLAST of mRNA_C-linearis_contig111.1488.1 vs. uniprot
Match: D7FL79_ECTSI (Tropinone reductase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL79_ECTSI) HSP 1 Score: 213 bits (541), Expect = 4.450e-58 Identity = 133/220 (60.45%), Postives = 147/220 (66.82%), Query Frame = -3
Query: 7208 SLEGRDAFLGLTEVATAAAAQGKTIGKAIVEELASLGAKVLTCSRTEEDVTACVAEWKAKGLEVQGIAVDVSTTEGRQTLFKGGT-----AIRRCLGHPGKQRWQEHPQDQHVRLHSPRVRRHHRRQL*LGLAAHSGADPLLKTAAEAEGARARGGSSVVNVSSIAGVTAVKTGAVYAASKAAINRLTINWGCEWAKDGIRVNAVAPGATNTPSMESVPR 7852
SLEGR A + K IGKAIVEELA LGAKVLTCSRTE+ V AC+ EW+AKGLEV GIAVDV+T EGRQ LF A+ + + G+ + D + + L L H PLLK AA AEGAR +GGSSVVN+SSIAGVTAVKTGA YAASKAAINRLTINWGCEWAKDGIRVNAVAPGATNTPS ESVPR
Sbjct: 13 SLEGRTALV---------TGGTKGIGKAIVEELACLGAKVLTCSRTEDGVIACITEWRAKGLEVHGIAVDVTTAEGRQELFSAAEEHFDGALDILVNNVGRSIRKSSTFDFTPEEFETIINTNFSTVLSLTKLFH----PLLKAAAAAEGARDKGGSSVVNISSIAGVTAVKTGAAYAASKAAINRLTINWGCEWAKDGIRVNAVAPGATNTPSTESVPR 219
BLAST of mRNA_C-linearis_contig111.1488.1 vs. uniprot
Match: D7FL70_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL70_ECTSI) HSP 1 Score: 223 bits (568), Expect = 5.990e-58 Identity = 235/827 (28.42%), Postives = 310/827 (37.48%), Query Frame = 3
Query: 723 NAASLLSSVHGMTDFRLIPRWSFFTQPLREAEERMRTSIGTLYVKV-VEGRGLMASDLNGRSDPYVKLCLTGRYLSTGQEWSEKLRLRKRTKIIKYSLNPVWDEEFSMPVR----RSGAVLKIEVWDWDRSSSDDPLGHFEVSIGEELLSQQPLDMWYVLEAPRGKAAAAQAAAEKRPRRQKAGLAEGSKANKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDELPDSPGSGYPASSLGDSSVSSKALVRRRSSGVEHADHSHESEEEKRACEACIKQRRKLFGEVRLVLWYQFDEFAEVCSHTWPEEPPKQVKTQFSPNELYRKGMICWQMAQPYVSFMVEADAIFCWERPWRSFMWMIALVVLLGVPPLLIVVINLALMRIVVSAYLKHRSGGDGIAAANHGPSARATAAGTAPLGQGSGHAXXXXXXXXXXLVASSFSPPAAGKADASSSQCVLGVSTSGESGKLTPPSTPTSGRHRSSSQSLFFSVAAFSSPSPPSPTADVDVFGNSAVPGAWAGAXXXXXEGGLQSAVSADGGGTSLSEAASDLSIVSSTRSQLNSKGSTRFPLLSRSL--ASRGGPGRRTSSGP---TADASARAAHLGYSTGGRGIRNSSSAPSWYQSXXXXXXXXXXXXXXXXXXTAGQATAFFAS-GATPPATLPVXXXXXXXXXXXXXXXXXXXXXXXXHPNSAKMPSVSXXXXXXXXXXXXXXXGGMKSAAEAGSMKMKNLLP---RRDPELQALYSKLGSTKKVPAVVNEVGKRLLSKSGPSLQQGLENMGRNLIQIRQRFHPLQVKELVVAMTALVFHTVLQLWLYLTGR 3161
+A+S SS HGM DFR+IPRWSFF+QPL + E+M+TSIG L + V G + D G +L++ ++ + + L + S P+R R A+ E+ S + P+ V +G + D+ G GY AS G S+K R+ + +DHSH+SE+E RAC+ CI++RRK FGEVRL+LWYQ+DEFAE+CSHTWPEEP K K FSPN+LYRKGM+ W+M +PYV+F+ E DAI W RP + R GG V G + + F V EGG + + + K ST F LSRSL +RG P RR S P TA+A +G ++ G +RNSSSAPS T + + F AS GA+ P + P NS P V GG+ SAA AGS K+K LLP RDPEL+ LY +LG TK+VPAVVN++GK +KSGPS+Q GL+ MG LI IRQRFHPL+ ++L + MTAL H VLQLWLY++GR
Sbjct: 39 DASSFYSSDHGMKDFRVIPRWSFFSQPLLDPAEKMKTSIGVLVARAGVVGEAAVEGPDEDHQDHAQSRLGRGVFLASQ-------KIGRGLEGGSLGLGSFYSRRSSGPLRGRHRRRAAIPTGEI----NSPPESPI---HVGLGVD-------------------------------------------------------------------------------DDFAGGNGGGYSASG-GRQGSSTKLGFGRKGGSMGPSDHSHQSEQEARACDVCIERRRKRFGEVRLILWYQYDEFAEMCSHTWPEEPLKPPKIVFSPNQLYRKGMVFWEMFRPYVTFLKEVDAISSWGRP-------------------------------------RKRQGG------------------------------------------------------------VFGA------------------------RRIRFDVGQ---------------------------------EGGXXXXXXXXX----XXQLSMXXXXXXXXXXRSQRKSSTTFFSLSRSLIRGNRGAPIRRRVSDPDPVTANA------VGSASAGVALRNSSSAPSRTAPWRAKAPRSAPPSTITTPTTMARTSIFAASSGASQPPSTPRALSISNAAAIDSN-------------NSYTGPGVGSGVSRDVVHAAGVAKGGVISAAGAGSKKIKKLLPVRGTRDPELRELYERLGGTKRVPAVVNQLGKVFFTKSGPSIQLGLDKMGMMLIMIRQRFHPLRARDLGLTMTALFAHMVLQLWLYVSGR 594
BLAST of mRNA_C-linearis_contig111.1488.1 vs. uniprot
Match: A0A6H5JMS4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMS4_9PHAE) HSP 1 Score: 189 bits (481), Expect = 1.440e-49 Identity = 131/244 (53.69%), Postives = 144/244 (59.02%), Query Frame = -3
Query: 7208 IGKAIVEELASLGAKVLTCSRTEEDVTACVA-------------------------EWKAKGLEVQGIAVDVSTTEGRQTLFKG----------------GTAIRRCLGHPGKQRWQEHPQDQHVR--LHSPRVRRHHRRQL*LGLAA----------HSGADPLLKTAAEAEGARARGGSSVVNVSSIAGVTAVKTGAVYAASKAAINRLTINWGCEWAKDGIRVNAVAPGATNTPSMESVPR 7780
IGKAIVEELA LGAKVLTCSRTE+ VTAC+ EW+AKGLEV GIAVDV+T EGRQ L+ G +IR+ E D + L + R + + LG A H PLLK AA AEGARA+GGSSVVN+SSIAGV AVKTGA YAASKAAINRLTINWGCEWAKDGIRVNAVAPGATNTPS ESVPR
Sbjct: 17 IGKAIVEELACLGAKVLTCSRTEDGVTACITGCLCVVLRDLSSRAFAVVLCLWLQQEWRAKGLEVYGIAVDVTTAEGRQELYSAAEERFDGALDILVNNVGRSIRKSSTFDYTPEEFETIIDTNFSTVLSLTKARLYVFTLICLGRFASLIPCSVFLFH----PLLKAAAAAEGARAKGGSSVVNISSIAGVIAVKTGAAYAASKAAINRLTINWGCEWAKDGIRVNAVAPGATNTPSTESVPR 256
BLAST of mRNA_C-linearis_contig111.1488.1 vs. uniprot
Match: D7FQN3_ECTSI (C2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQN3_ECTSI) HSP 1 Score: 177 bits (450), Expect = 2.910e-46 Identity = 84/151 (55.63%), Postives = 113/151 (74.83%), Query Frame = 3
Query: 720 GNAASLL---SSVHGMTDFRLIPRWSFFTQPLREAEERMRTSIGTLYVKVVEGRGLMASDLNGRSDPYVKLCLTGRYLSTGQEWSEKLRLRKRTKIIKYSLNPVWDEEFSMPVRRSGAVLKIEVWDWDRSSSDDPLGHFEVSIGEELLSQQ 1163
GNA + + + +G D+R I W F PL + R + +IGTL+ KVVE RGL++ D GRSDP+ +L LTGRYLS GQEWSE LR+R++T++IK+SLNPVW+EEFS+PVRR+GAVL+I +WDW+ S DDPLGH EV +G +LL+Q+
Sbjct: 38 GNAVNPIVDEADNYGWMDYRSISGWKFPAWPLLQPSTRAKMTIGTLHAKVVEARGLISRDFAGRSDPFAELELTGRYLSHGQEWSEPLRVREKTRVIKFSLNPVWNEEFSLPVRRAGAVLRIRLWDWNASIPDDPLGHIEVKMGGDLLAQK 188
BLAST of mRNA_C-linearis_contig111.1488.1 vs. uniprot
Match: D7FL76_ECTSI (Tropinone reductase, putative / tropine dehydrogenase, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL76_ECTSI) HSP 1 Score: 154 bits (390), Expect = 1.910e-37 Identity = 99/207 (47.83%), Postives = 120/207 (57.97%), Query Frame = -3
Query: 7214 KTIGKAIVEELASLGAKVLTCSRTEEDVTACVAEWKAKGLEVQGIAVDVSTTEGRQTLFK----------------GGTAIRRCLGHPGKQRWQEHPQDQHVRLHSPRVRRHHRRQL*LGLAAHSGADPLLKTAAEAEGARARGGSSVVNVSSIAGVTAVKTGAVYAASKAAINRLTINWGCEWAKDGIRVNAVAPGATNTPSMESV 7786
K IGKAIVEELA LGAKV+TCSR DV AC+ EWK+KGL V+G A DV+T EGR++L K GT IR+ + L L H PLLK AA +G+R GGSSV+N+SS+AG+T +K+G+ YAASKAA+N++T WGCEWA DGIRVNAVAP T TP E V
Sbjct: 59 KGIGKAIVEELACLGAKVITCSRNPADVAACLEEWKSKGLLVEGTAADVTTAEGRESLVKLAEEHFGGLLDILVNNVGTNIRKATVDYTPEELAYVMDTNFTSLFL------------LTKLLH----PLLKAAAAVKGSRENGGSSVINISSVAGITPIKSGSPYAASKAAMNQVTRLWGCEWAPDGIRVNAVAPWYTKTPLTEPV 249
BLAST of mRNA_C-linearis_contig111.1488.1 vs. uniprot
Match: A0A835YM08_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM08_9STRA) HSP 1 Score: 125 bits (315), Expect = 5.260e-28 Identity = 89/207 (43.00%), Postives = 111/207 (53.62%), Query Frame = -3
Query: 7214 KTIGKAIVEELASLGAKVLTCSRTEEDVTACVAEWKAKGLEVQGIAVDVSTTEGRQTL-------FKG---------GTAIRRCLGHPGKQRWQEHPQDQHVRLHSPRVRRHHRRQL*LGLAAHSGADPLLKTAAEAEGARARGGSSVVNVSSIAGVTAVKTGAVYAASKAAINRLTINWGCEWAKDGIRVNAVAPGATNTPSMESV 7786
K IG AIV ELA LGA+V TC+R++ D+ C+AEW+A+GL+V G DVS+ E R L F G GT+IRR + E V HS A PLLK A+GG SVVN+ S+AGVT++K+G YAASKAA++++T N CEWA DGIRVN VAP TNTP V
Sbjct: 19 KGIGNAIVVELAHLGAEVYTCARSDADLQQCLAEWRAQGLKVHGSVADVSSAEDRAALLQKVGEAFGGSLDILVNNVGTSIRRATVDYTSE---EAEHVLRVNFHSC-------------FAMMQLCHPLLK--------EAQGGGSVVNIGSVAGVTSIKSGTPYAASKAAMHKVTQNCACEWAGDGIRVNCVAPWYTNTPLASPV 201
BLAST of mRNA_C-linearis_contig111.1488.1 vs. uniprot
Match: W7UA18_9STRA (Tropinone reductase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UA18_9STRA) HSP 1 Score: 124 bits (312), Expect = 1.540e-27 Identity = 83/200 (41.50%), Postives = 117/200 (58.50%), Query Frame = -3
Query: 7214 KTIGKAIVEELASLGAKVLTCSRTEEDVTACVAEWKAKGLEVQGIAVDVSTTEGRQTLFK--GGTAIRRC------LGHPGKQRWQEHPQDQHVRLHSPRVRR-HHRRQL*LGLAAHSGADPLLKTAAEAEGARARGGSSVVNVSSIAGVTAVKTGAVYAASKAAINRLTINWGCEWAKDGIRVNAVAPGATNTPSMESV 7786
K IGKAIVEE ASLGA+V TC+R+ D+ AC+ EW AKG EV+GIAVDVS ++ R+ + + G+ + R +G ++ ++ +DQ+ ++ ++ +H QL A PLLK A G V+NV S+AGV +K+G+VY +KAA+ +L+ N CEWA DGIRVN VAP TP V
Sbjct: 28 KGIGKAIVEEFASLGARVFTCARSASDLAACLKEWTAKGYEVEGIAVDVSDSDARRAMMEQVAGSFVGRLDVLVNNVGTNIRKPTAQYTEDQYDKIMDINLKSTYHLCQL---------AHPLLKKA---------GKGCVINVGSVAGVIGIKSGSVYGLTKAAMVQLSKNLACEWASDGIRVNTVAPWYIETPLTAQV 209 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig111.1488.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig111.1488.1 >prot_C-linearis_contig111.1488.1 ID=prot_C-linearis_contig111.1488.1|Name=mRNA_C-linearis_contig111.1488.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1197bp MFRKRTSGKKSSNGQADGKSRAARQRTRERGSSLGNAASLLSSVHGMTDFback to top mRNA from alignment at C-linearis_contig111:112280..147446+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig111.1488.1 ID=mRNA_C-linearis_contig111.1488.1|Name=mRNA_C-linearis_contig111.1488.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=35167bp|location=Sequence derived from alignment at C-linearis_contig111:112280..147446+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig111:112280..147446+ >mRNA_C-linearis_contig111.1488.1 ID=mRNA_C-linearis_contig111.1488.1|Name=mRNA_C-linearis_contig111.1488.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=7182bp|location=Sequence derived from alignment at C-linearis_contig111:112280..147446+ (Chordaria linearis ClinC8C monoicous)back to top |