mRNA_C-linearis_contig7.14620.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig7.14620.1 vs. uniprot
Match: A0A6H5JHQ3_9PHAE (DNA polymerase lambda n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHQ3_9PHAE) HSP 1 Score: 724 bits (1868), Expect = 3.980e-244 Identity = 499/934 (53.43%), Postives = 576/934 (61.67%), Query Frame = 3
Query: 180 FTQQFRQLDACRSKLQSEVMAELAAETEEKRRETERLKADNKRXXXXXXXXXXXXXXXXXXXXXXXXXXXNXXXXXXXXXXXXXXXXXXXXGYGSEVLIPVPP--SHDGVASRTSSPPTSSSSGRGGLPLPEE-----------------------------GSKPTAALSGGSTSASTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATSGQSAPTAAGAPRKGDARPAVRFLEDLLPAPGQVRRSKPRARAADTXXXXXXXXXXXXXXXXXXXXXXXXX--GEPAPTGPFSGLRLCVVHLGSVTSNTIKTFEKGVRSGGGNLSTHYTPRDTTHIVADASLALSWEKLDLYFSGW---DDFEDDVGDTGGKAGEARTGAPDGVPIVSSEWMSECLRRSALVPTDAYLLIPSQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPERKQARG------AGEGGAPAKSRTLPVEGGHGAKNPYIGKKRHTFFCQATGFGPQTVFNEEAAQKLERLAELCATRGGDGSVFRERGFKAAAGVLRRLGVQITNIEQLKDLRKNEPERVRGLGESVMKELTTFYEEGRMNRLDGLEADPKLRCLELFQKVSWVGPKKAEELHDNGLRSIEDLRAGGQHLLTEQARICLNRHEDITQRMPRSEAAEVEAVVTREAQSICPGAICQASFQATKACGSYRRGKSHCGDVDVLIRPPEGQEDVELLLELVSRLTAMGFITDTLAMPHGACKPGKPQSYMGICKLEGEGRLHRRVDIKVYPTSMFAFAVLYFTGSGHFNTSMRAFAKAKGLKLSDQGLFKVNTVNGKEVHRFEDSCRCLHEKDVFAALGLEWREPKDRDGVQVEGVYGRRADGALELKGGQAVPVPSDLEQRQRASLQ 2855
FTQ+FR++DA R+ L++ V ELA +TEE+RRET R+ A+NKR GYGSEV I VP DG ASRT S + SSG + P + G P G S AST +T QS +AGA + G A+ VRFLED+L + RS A G A +GPFSGL LCVVHLGSVT+NTIKTF++GV GGG++S +TP DTTHIVADASLA SWEKLD YFSGW DD +D V GG+ G P+GVPIVS+EW+SECLRRS +V TDAY LIP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX R + RG AG+ A ++ V+GG GA+NP +GKKRHTF CQ+T N EAA LE LA+LCA RGGDGSVF+ERGFK AAGVL+RLGVQITNI+QLKDLRK+EP+RVRGLG+SVMKEL TFYEEGRM RLD LEADPKL+CL++FQ+V WVG KA++L+D G+RSIEDLR G HLL+EQA+ICLNRHEDITQRMPRSEAAE+EAVVTR AQSICPG ACGSYRRGKSHCGDVDVLIRPPEGQED + +L+ RL GFITD L + KPGK QS+MGICKL G+GRLHRRVDIK YPTS+FAFAVLYFTGS HFN SMR+FAK KGLKLSD+GL +VNTVNG+EVHRF S CL E+DVF ALGLEWREPKDRDGVQV+ + GA EL G + VPV + EQ+ +A L+
Sbjct: 16 FTQRFRKIDAIRTALRTAVAEELAQQTEERRRETHRVNAENKRRSATAAAAALDGKTDSSGIFPGRDSD----------------------GYGSEVSISVPCRLGCDGTASRTRS---AGSSGGRAVSRPRDRLVELLSTAACVKQASASPDKAFGWRVDSGDGPEGEQEGASGVAST---------------CGGRRDGHDRGPTPPPAAASVSTESQSVLASAGA-KGGGAKTGVRFLEDILRLGPKGSRSNDAGGALPNPKRKSHPRRGGCKGEASRTQTHKKPRQGTGAVSGPFSGLSLCVVHLGSVTNNTIKTFKRGVCDGGGHVSMRFTPGDTTHIVADASLAASWEKLDNYFSGWGGVDDLDDAV--NGGRVGLKSGMMPEGVPIVSNEWLSECLRRSVVVATDAYRLIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGHIGLASSTRLTAA-----------RNEVRGGSTQGTAGQSTVAADLESMAVKGGFGARNPDVGKKRHTFHCQSTTNSRGHAVNSEAADMLEDLAKLCAVRGGDGSVFKERGFKNAAGVLKRLGVQITNIQQLKDLRKHEPQRVRGLGDSVMKELATFYEEGRMYRLDELEADPKLKCLKIFQEVGWVGAVKAQQLYDQGIRSIEDLRTKGLHLLSEQAQICLNRHEDITQRMPRSEAAEIEAVVTRVAQSICPG-----------ACGSYRRGKSHCGDVDVLIRPPEGQEDSPVFDDLIKRLVETGFITDKLTLAGSPHKPGKSQSFMGICKLPGKGRLHRRVDIKFYPTSLFAFAVLYFTGSSHFNRSMRSFAKIKGLKLSDKGLCRVNTVNGEEVHRFP-SYSCLREEDVFTALGLEWREPKDRDGVQVQAFCSKGEGGATELSG-RVVPVTLEQEQQHQALLE 882
BLAST of mRNA_C-linearis_contig7.14620.1 vs. uniprot
Match: D7G2F7_ECTSI (DNA polymerase lambda n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2F7_ECTSI) HSP 1 Score: 627 bits (1618), Expect = 2.400e-208 Identity = 465/841 (55.29%), Postives = 543/841 (64.57%), Query Frame = 3
Query: 798 VRFLEDLL------------PAPGQVRRSKPRARAADTXXXXXXXXXXXXXXXXXXXXXXXXXGEPAPTGPFSGLRLCVVHLGSVTSNTIKTFEKGVRSGGGNLSTHYTPRDTTHIVADASLALSWEKLDLYFSGWDDFEDDVGDTGGKAGEARTGAPDGVPIVSSEWMSECLRRSALVPTDAYLLIPSQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPERKQARGAGEGGAPAKSRTLPVEGGHGAKNPYIGKKRHTFFCQATGFGPQTVFNEEAAQKLERLAELCATRGGDGSVFRERGFKAAAGVLRRLGVQITNIEQLKDLRKNEPERVRGLGESVMKELTTFYEEGR-MNRLDGLEADPKL--RCLELFQKVSWVGPKKAEELHDNGLRSIEDLRAGGQHLLTEQARICLNRHEDITQRMPRSEAAEVEAVVTREAQSICPGAICQASFQATKACGSYRRGKSHCGDVDVLIRPPEGQEDVELLLELVSRLTAMGFITDTLAMPHGACKPGKPQSYMGICKLEGEGRLHRRVDIKVYPTSMFAFAVLYFTGSGHFNTSMRAFAKAKGLKLSDQGLFKVNTVNGKEVHRFEDSCRCLHEKDVFAALGLEWREPKDRDGVQVEGVYGRRADGALELKGGQAVPVPSDLEQRQRASLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQALLLSRGAFGAGAGAAXXXXXXG--AGVAMETGNHGNGCEDQMVQEALRRSVAETAAAARLGGEEERVWETLPPEAMAGGGXXXXXXXX---GDSGVGAGTEDSPVCL 3260
+R+LEDLL AP R+++PR A+ A +GPFSGL LCVV GSVT+NT+ T + R GGG +STHYTP DTTHIVADASLA SWEKLD YFSGWDDFED V D AG R PDGVP+VSSEWMSECLRRS +V +AY L P XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +R A G A +R + +EG GA+ P + +R + ++ +GPQ+ N+EAA L+ LAELCATRGGDGSVF ERGFK+AA LR LG QIT+IEQLKDLRKN+PERVRG+G+ MKELT F EG+ +R ADP CL+LFQ+V WVG KA +L+D G+RSIEDLR G+ LLTEQ R+CLNRHEDI QRMPRSEAAE+EA VT+ AQSICPG ICQ ACGSYRRGKS+CGDVDVLIRPPEGQED + LEL+ LT GFITD LAMP G PGKPQ++MG+CKL GEG++HRR+D+K+YPTSMFAFAVLYFTGSG FN +MR FAK+KGLKL+D+GLFKV+ +G+EV SC L E+DVF+ALG++W EPKDR GV G AL QA+P+ + A XXXXXXXXXXXXXXXXXXXXXX QQA+ LSRG F A XXXXXX AG A G+ D +QEALRRSVA+T A +GG E V +AGG G++GVG G+E SPVCL
Sbjct: 3 IRYLEDLLCSAPKGSRSNAVAAPSPKRKNRPRGGASGDNGGIETNKRPWKRAG-------------AASGPFSGLSLCVVSQGSVTNNTVGTLTREFRDGGGQVSTHYTPGDTTHIVADASLAASWEKLDDYFSGWDDFEDVV-DGAATAGRGRM--PDGVPVVSSEWMSECLRRSEVVTAEAYRLTPPLHHCAAPATVAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHQTTGGLVATRN--------QRGDAARGSPSGRGAAARLMNLEGEVGARKPNVDMRRVSQGQPSSFWGPQSP-NKEAADMLDGLAELCATRGGDGSVFNERGFKSAAAALRMLGTQITDIEQLKDLRKNDPERVRGVGDGAMKELTAFLAEGKGKSRAPVSGADPPAPEACLKLFQEVGWVGAVKARQLYDKGMRSIEDLRTSGRDLLTEQMRVCLNRHEDIKQRMPRSEAAEIEAAVTKVAQSICPGVICQ-------ACGSYRRGKSNCGDVDVLIRPPEGQEDSPMFLELIKELTETGFITDRLAMPEGPYTPGKPQTFMGVCKLPGEGQIHRRLDVKLYPTSMFAFAVLYFTGSGDFNMNMRCFAKSKGLKLNDKGLFKVDPFSGEEVPNSGYSC--LREEDVFSALGMDWIEPKDRKGV---GPASHNQQEALPQH--QAIPMAEAGSYYENAE-------QXXXXXXXXXXXXXXXXXXXXXXQVQQAICLSRGVFDASGXXXXXXXXXXXXAGAANYDGS-----ADPDLQEALRRSVADTRFA--VGGGEREV--------VAGGSGSTATAASSAEGNNGVGTGSEHSPVCL 782
BLAST of mRNA_C-linearis_contig7.14620.1 vs. uniprot
Match: D7G2F8_ECTSI (DNA polymerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2F8_ECTSI) HSP 1 Score: 582 bits (1500), Expect = 5.910e-196 Identity = 294/419 (70.17%), Postives = 339/419 (80.91%), Query Frame = 3
Query: 1599 LPVEGGHGAKNPYIGKKRHTFFCQATGFGPQTVFNEEAAQKLERLAELCATRGGDGSVFRERGFKAAAGVLRRLGVQITNIEQLKDLRKNEPERVRGLGESVMKELTTFYEEGRMNRLDGLEADPKLRCLELFQKVSWVGPKKAEELHDNGLRSIEDLRAGGQHLLTEQARICLNRHEDITQRMPRSEAAEVEAVVTREAQSICPGAICQASFQATKACGSYRRGKSHCGDVDVLIRPPEGQEDVELLLELVSRLTAMGFITDTLAMPHGACKPGKPQSYMGICKLEGEGRLHRRVDIKVYPTSMFAFAVLYFTGSGHFNTSMRAFAKAKGLKLSDQGLFKVNTVNGKEVHRFEDSCRCLHEKDVFAALGLEWREPKDRDGVQVEGVYGRRADGALELKGGQAVPVPSDLEQRQRASLQ 2855
+ V+GG GA+NP +GKKRHTF CQ+T N EAA LE LA+LCA RGGDGSVF+ERGFK AAGVLRRLGVQITNI+QLKDLRK+EP+RVRGLG+SVMKEL+TFYEEGRM+RLDGLEADPKL+CL++ Q+V WVG KA++L+D G+RSIEDLR G HLL+EQA+ICL+RHEDI QRMPRSEAAE+EAVVT+ AQSICPG ICQ ACGSYRRGKSHCGDVDVLIRPPEGQED + +L+ RL GFITD L + G +PGK QS+MGICKL G GRLHRRVDIK YPTS+FAFAVLYFTGS HFN SMR+FAK KGLKLSD+GL +VNTVNG+EVHRF S CL E+DVF ALGLEWREPKDRDGVQV+ + GA EL G + VPV + EQ+ +A L+
Sbjct: 1 MAVKGGFGARNPDVGKKRHTFHCQSTTTSRGHAANSEAANMLEDLAKLCAVRGGDGSVFKERGFKNAAGVLRRLGVQITNIQQLKDLRKHEPQRVRGLGDSVMKELSTFYEEGRMHRLDGLEADPKLKCLKILQEVGWVGAVKAQQLYDKGVRSIEDLRTKGLHLLSEQAQICLSRHEDIMQRMPRSEAAEIEAVVTKVAQSICPGVICQ-------ACGSYRRGKSHCGDVDVLIRPPEGQEDSPMFDDLIKRLVETGFITDKLTLAGGPHRPGKSQSFMGICKLPGTGRLHRRVDIKFYPTSLFAFAVLYFTGSSHFNRSMRSFAKIKGLKLSDKGLCRVNTVNGEEVHRFP-SYSCLREEDVFTALGLEWREPKDRDGVQVQAFCSKGEGGATELSG-RVVPVTLEQEQQHQALLE 410
BLAST of mRNA_C-linearis_contig7.14620.1 vs. uniprot
Match: A0A6H5JQ91_9PHAE (DNA polymerase lambda n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ91_9PHAE) HSP 1 Score: 527 bits (1357), Expect = 6.720e-170 Identity = 365/780 (46.79%), Postives = 426/780 (54.62%), Query Frame = 3
Query: 960 APTGPFSGLRLCVVHLGSVTSNTIKTFEKGVRSGGGNLSTHYTPRDTTHIVADASLALSWEKLDLYFSGWDDFEDDVGDTGGKAGEARTGAPDGVPIVSSEWMSECLRRSALVPTDAYLLIPSQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPERKQARGAGEGGAPAKSRTLPVEGGHGAKNPYIGKK-RHTFFCQATGFGPQTVFNEEAAQK-LERLAELCATRGGDGSVFRERGFKAAAGVLRRLGVQITNIEQLKDLRKNEPERVRGLGESVMKELTTFYEEGRMNRLDGLEADPKL--RCLELFQKVSWVGPKKAEELHDNGLRSIEDLRAGGQHLLTEQARICLNRHEDITQRMPRSEAAEVEAVVTREAQSICPGAICQASF-----QATKACGSYRRGKSHCGDVDVLIRPPEGQEDVELLLELVSRLTAMGFITDTLAMPHGACKPGKPQSYMGICKLEGEGRLHRRVDIKVYPTSMFAFAVLYFTGSGHFNTSMRAFAKAKGLKLSDQGLFKVNTVNGKEVHRFEDSCRCLHEKDVFAALGLEWREPKDRDGVQVEGVYGRRADGALELKGGQAVPVPS----DLEQRQRASLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQALLLSRGAFGAGAGAAXXXXXXGAGVAMETGNHGNGCEDQMVQEALRRSVAETAAAARLGGEEERVWETLPPEAMAGGGXXXXXXXXGDSGVGAGTEDSPVCL 3260
A +GPFSGL LCVV LGSVT+NT+ T + R GGG +STHYTP DTTHIVADASLA SWEK DLYFSGWDDFED V D AG R PDGVP+VSSEWMSECLRRS +V DAY L P + K A G G G R ++ G P ++ + T +AT E+ +++ + R GDGSVF ERGFK+AA LR LG QIT+IEQLK E+ + F R R E DP CL+LFQ+V WVG K ++L+D G+RSIE+LR G+HLLTEQ R CLNRHEDI RMPRSEAAE+EA VT+ AQSICPG ICQASF + T+ACGSYRR K +CGDVDVLIRPPEGQED + LELV LT ITD LA+P G PGKPQ++MG+CKL GEGRLHRR+DIK+YP SMFAFAVLYF GSG FN +MR F K+KGLKL+D+GLFKV+ +G+EV SC E+DVF ALG++W EPKDR GV G+ AL QA+P+ L S XXXXXXXXXXXXXXX QQA+ LSRG F AG GA +A G G G Q RR VA+T A GGE E V +G G +GVG G E SPV L
Sbjct: 56 AASGPFSGLSLCVVRLGSVTNNTVGTLPREFRDGGGQVSTHYTPGDTTHIVADASLAASWEKFDLYFSGWDDFEDVV-DGAATAGRGRM--PDGVPVVSSEWMSECLRRSEVVAADAYRLTPPPHRCVAPAAVAPTQQQRQEEGVDIGGRGDHRWSRG------------------------------------DEKPAGGRGGGKRVGLKRRGGIDEFGGGGWPQEARRGQETSVSRATEHFLAAPVTEQGSRRYVGRPGRALRDARGDGSVFNERGFKSAAATLRMLGTQITDIEQLK--------------ETSERGSRPFLPRARARRSPVSEVDPPTVEACLKLFQEVGWVGAVKTQQLYDKGMRSIENLRTRGRHLLTEQVRFCLNRHEDIKPRMPRSEAAEIEAAVTKVAQSICPGVICQASFLTSPRRRTEACGSYRRVKRNCGDVDVLIRPPEGQEDSSMFLELVKELTETRLITDRLAVPEGPYTPGKPQTFMGVCKLPGEGRLHRRLDIKLYPASMFAFAVLYFAGSGDFNMNMRCFGKSKGLKLNDKGLFKVDPFSGEEVPNSGYSC--FREEDVFTALGMDWIEPKDRKGV---GLASHNQQEALLQH--QAIPMAEASLWSLRAYTAGSYYENAEQXXXXXXXXXXXXXXXEMFFRKEDQVQQAIRLSRGVFDAG----------GASIAA-AGAGGLGRRSQ------RRCVADTRFAVG-GGEREVV------AGGSGSNATAVSSAEGTNGVGTGNEHSPVYL 751
BLAST of mRNA_C-linearis_contig7.14620.1 vs. uniprot
Match: W4GGX8_9STRA (DNA polymerase n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GGX8_9STRA) HSP 1 Score: 231 bits (590), Expect = 3.500e-61 Identity = 138/360 (38.33%), Postives = 199/360 (55.28%), Query Frame = 3
Query: 1659 FFCQATGFGPQTVFNEEAAQKLERLAELCATRGGDGSVFRERGFKAAAGVLRRLGVQITNIEQLKDLRKNEPERVRGLGESVMKELTTFYEEGRMNRLDGLEADPKLRCLELFQKVSWVGPKKAEELHDNGLRSIEDLRAGGQHLLTEQARICLNRHEDITQRMPRSEAAEVEAVVTREAQSICPGAICQASFQATKACGSYRRGKSHCGDVDVLIRPPEGQEDVELLLELVSRLTAMGFITDTLAMPHGACKPGKPQSYMGICKLEGEGRLHRRVDIKVYPTSMFAFAVLYFTGSGHFNTSMRAFAKAKGLKLSDQGLFKVNTVNGKEVHRFEDSCRCLHEKDVFAALGLEWREPKDRD 2738
F C + V N E+L E + +RE +K +L++L ++T+ L +P+ GL + + ++ E G + +L+ +DP+L+ L F + VGP A L+ G R+++DLRA +LT RI L ++D ++PRSE E+E+VV + S+ P A+ CGSYRRGKS GDVDVLI P Q+D ++ L++ L A+GF+TD L K G SYMG+C+L GEGR +RR+DIKVYP ++F FA LYFTGS HFN SMRAFAK KG L+D+GL+K G + + + C EKDVF AL L ++ P +R+
Sbjct: 304 FVCTTSSVLKSNV-NAHLTGPFEQLVEYLHVENDE---WRENSYKRICSILKQLPNRVTSAHSL------QPQH--GLNSTGIAKIREILETGTLRKLEAKRSDPRLQVLLQFSNIWGVGPATATNLYRAGYRTLDDLRAKQDEVLTHNQRIGLKHYDDFLAKIPRSEVQEIESVVKQHVHSLLPRAV-------AITCGSYRRGKSQSGDVDVLISDPT-QDDCNIMPRLLADLHAIGFLTDDLTTVEEH-KIGGSDSYMGVCRL-GEGRRYRRIDIKVYPRNLFGFAQLYFTGSDHFNRSMRAFAKMKGYSLTDKGLYKATRSKGVKKLKQGPNVICRDEKDVFLALQLPYKRPDERN 641
BLAST of mRNA_C-linearis_contig7.14620.1 vs. uniprot
Match: G1P3K8_MYOLU (DNA polymerase n=21 Tax=Laurasiatheria TaxID=314145 RepID=G1P3K8_MYOLU) HSP 1 Score: 221 bits (562), Expect = 4.640e-58 Identity = 138/363 (38.02%), Postives = 192/363 (52.89%), Query Frame = 3
Query: 1665 CQATGFGPQTVFNEEAAQKLERLAELCATRGGDGSVFRERGFKAAAGVLRRLGVQITNIEQLKDLRKNEPERVRGLGESVMKELTTFYEEGRMNRLDGLEADPKLRCLELFQKVSWVGPKKAEELHDNGLRSIEDLRAGGQHLLTEQARICLNRHEDITQRMPRSEAAEVEAVVTREAQSICPGAICQASFQATKACGSYRRGKSHCGDVDVLIRPPEGQEDVELLLELVSRLTAMGFITDTLAMPHGACKPGKPQSYMGICKLEGEGRLHRRVDIKVYPTSMFAFAVLYFTGSGHFNTSMRAFAKAKGLKLSDQGLFK--VNTVNGKEVHRFEDSCRCLH---EKDVFAALGLEWREPKDRD 2738
C T N +KLE LA+ + +G +R G+ A L+ +T+ ++ + G+G+ + +++ E G + +LD + + LELF + G K A+ + G RS+ED+R Q LT Q I L ++D +RMPR EAAE+E V AQ+ PG +C ACGSYRRGK+ CGDVDVL+ P+G+ + + L+ L GF+TD L + G+ Q Y+G+C+L G GR HRR+DI + P S FA A+LYFTGS HFN SMRA AK KG+ LS+ L V G +V S R L EKDVF LGL +REP +RD
Sbjct: 239 CAQPSSQKATNHNTHITEKLEVLAKAYSVQGDK---WRALGYDKAINALKSFHKPVTSYQEACS--------IPGIGKRMAEKIVEILESGHLRKLDHIS--DSVPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIR--NQASLTTQQAIGLKHYDDFLERMPREEAAEIEQTVRESAQAFSPGLLCV-------ACGSYRRGKATCGDVDVLLTHPDGRSHQGIFIRLLDSLRQRGFLTDDLVSHE---ENGQQQKYLGVCQLPGPGRRHRRLDIIIVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSAAVVRDTRGLKV----GSGRVLPTPTEKDVFRLLGLPYREPAERD 572
BLAST of mRNA_C-linearis_contig7.14620.1 vs. uniprot
Match: UPI0003315966 (DNA polymerase lambda isoform X1 n=2 Tax=Sorex araneus TaxID=42254 RepID=UPI0003315966) HSP 1 Score: 218 bits (555), Expect = 5.820e-58 Identity = 134/360 (37.22%), Postives = 190/360 (52.78%), Query Frame = 3
Query: 1665 CQATGFGPQTVFNEEAAQKLERLAELCATRGGDGSVFRERGFKAAAGVLRRLGVQITNIEQLKDLRKNEPERVRGLGESVMKELTTFYEEGRMNRLDGLEADPKLRCLELFQKVSWVGPKKAEELHDNGLRSIEDLRAGGQHLLTEQARICLNRHEDITQRMPRSEAAEVEAVVTREAQSICPGAICQASFQATKACGSYRRGKSHCGDVDVLIRPPEGQEDVELLLELVSRLTAMGFITDTLAMPHGACKPGKPQSYMGICKLEGEGRLHRRVDIKVYPTSMFAFAVLYFTGSGHFNTSMRAFAKAKGLKLSDQGLFK--VNTVNGKEVHRFEDSCRCLHEKDVFAALGLEWREPKDRD 2738
C T N +KLE LA+ + +G +R G+ A L+ +T ++ + G+G+ + +++ E G + +LD + + LELF + G K A+ + G RS++D+R Q LT Q I L ++D +RMPR EAAE+E V AQ++ PG +C ACGSYRRGK+ CGDVDVL+ P+G+ +L L+ L GF+TD L + G+ Q Y+G+C+L G GR HRR+DI P FA A+LYFTGS HFN SMRA AK KG+ LS+ L V + G +V + + EKDVF LGL +REP +RD
Sbjct: 152 CAQPSSRKATNHNPHITEKLEVLAKAYSVQGDK---WRALGYAKAINALKSFHKPVTTYQEACS--------IPGVGKRMAEKIVEILESGHLRKLDHISES--VPVLELFSNIWGAGTKTAQMWYQQGFRSLDDIR--DQASLTTQQAIGLKHYDDFLERMPREEAAEIEQTVRESAQALSPGLLCV-------ACGSYRRGKASCGDVDVLVTHPDGRSHQGILSRLLESLRQQGFLTDDLVSQE---ENGQQQKYLGVCRLPGPGRRHRRLDIITVPYGEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSSAVVRSPRGLKVGPGQ-ALPTPTEKDVFRLLGLPYREPAERD 485
BLAST of mRNA_C-linearis_contig7.14620.1 vs. uniprot
Match: L5MB70_MYODS (DNA polymerase n=3 Tax=Myotis davidii TaxID=225400 RepID=L5MB70_MYODS) HSP 1 Score: 219 bits (559), Expect = 1.160e-57 Identity = 143/385 (37.14%), Postives = 199/385 (51.69%), Query Frame = 3
Query: 1599 LPVEGGHGAKNPYIGKKRHTFFCQATGFGPQTVFNEEAAQKLERLAELCATRGGDGSVFRERGFKAAAGVLRRLGVQITNIEQLKDLRKNEPERVRGLGESVMKELTTFYEEGRMNRLDGLEADPKLRCLELFQKVSWVGPKKAEELHDNGLRSIEDLRAGGQHLLTEQARICLNRHEDITQRMPRSEAAEVEAVVTREAQSICPGAICQASFQATKACGSYRRGKSHCGDVDVLIRPPEGQEDVELLLELVSRLTAMGFITDTLAMPHGACKPGKPQSYMGICKLEGEGRLHRRVDIKVYPTSMFAFAVLYFTGSGHFNTSMRAFAKAKGLKLSDQGLFK--VNTVNGKEVHRFEDSCRCLH---EKDVFAALGLEWREPKDRD 2738
+P EG G K+ + C T N +KLE LA+ + +G +R G+ A L+ +T+ ++ + G+G+ + +++ E G + +LD + + LELF + G K A+ + G RS+ED+R Q LT Q I L ++D +RMPR EAAE+E V AQ+ PG +C ACGSYRRGK+ CGDVDVL+ P+G+ + L+ L GF+TD L + G+ Q Y+G+C+L G GR HRR+DI + P S FA A+LYFTGS HFN SMRA AK KG+ LS+ L V G +V S R L EKDVF LGL +REP +RD
Sbjct: 219 IPPEGDGDPSPAPEGLKK--WVCAQPSSQKATNHNTHITEKLEVLAKAYSVQGDK---WRALGYDKAINALKSFHKPVTSYQEACS--------IPGIGKRMAEKIVEILESGHLRKLDHISHS--VPVLELFSNIWGAGTKTAQMWYQQGFRSLEDIR--NQASLTTQQAIGLKHYDDFLERMPREEAAEIEQTVRESAQAFSPGLLCV-------ACGSYRRGKATCGDVDVLLTHPDGRSHQGIFSRLLDSLRQRGFLTDDLVSQE---ENGQQQKYLGVCQLPGPGRRHRRLDIIIVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSAAVVRDTRGLKV----GSGRVLPTPTEKDVFRLLGLPYREPAERD 572
BLAST of mRNA_C-linearis_contig7.14620.1 vs. uniprot
Match: A0A6G0WSH1_9STRA (DNA polymerase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WSH1_9STRA) HSP 1 Score: 218 bits (555), Expect = 3.580e-57 Identity = 127/338 (37.57%), Postives = 192/338 (56.80%), Query Frame = 3
Query: 1737 ELCATRGGDGSVFRERGFKAAAGVLRRLGVQITNIEQLKDLRKNEPERVRGLGESVMKELTTFYEEGRMNRLDGLEADPKLRCLELFQKVSWVGPKKAEELHDNGLRSIEDLRAGGQHLLTEQARICLNRHEDITQRMPRSEAAEVEAVVTREAQSICPGAICQASFQATKACGSYRRGKSHCGDVDVLIRPPEGQEDVELLLELVSRLTAMGFITDTLAMPH----GACKPGKPQSYMGICKLEGEGRLHRRVDIKVYPTSMFAFAVLYFTGSGHFNTSMRAFAKAKGLKLSDQGLFKVNTVNGKEVHRFEDSCRCLHEKDVFAALGLEWREPKDRD 2738
EL A + +R +K +L++L ++T+ LK P+ G + ++ E G + +L+ +AD +L+ L F + VGP A +L+ +G RS++DLRA Q +L ++ RI L ++D ++PR+E E+EAVV + + P A+ CGSYRRGKS GDVD+L+ P ++D +L L+ L +GF+TD L M + G C SYMG+C+L EG +RR+DIKVYP ++F FA LYFTGS HFN SMRA+AK KG L+D+GL+K G + + + C E+DVF AL L ++ P++R+
Sbjct: 251 ELIAYLTVEHDEWRVNSYKRMVSILKQLPEKVTDASTLK------PQH--GFNAKGIAKVRELLETGTLRKLEAKKADARLQVLRKFSDIWGVGPSTATDLYSSGYRSLDDLRAK-QEILNDKQRIGLKHYDDFLVKIPRNEVEEIEAVVKKHIHRLAPHAV-------AITCGSYRRGKSQSGDVDILVSDPT-RDDCNILPRLLKDLHGIGFLTDDLTMVYEHHIGGC-----DSYMGVCRL-AEGMRYRRIDIKVYPRNLFGFAQLYFTGSDHFNRSMRAYAKTKGYSLTDKGLYKATRAKGVKKLKKGPNLICPDERDVFIALHLPYKRPEERN 565
BLAST of mRNA_C-linearis_contig7.14620.1 vs. uniprot
Match: A0A5F5PJL1_HORSE (DNA polymerase n=2 Tax=Laurasiatheria TaxID=314145 RepID=A0A5F5PJL1_HORSE) HSP 1 Score: 209 bits (532), Expect = 5.180e-57 Identity = 124/289 (42.91%), Postives = 165/289 (57.09%), Query Frame = 3
Query: 1887 GLGESVMKELTTFYEEGRMNRLDGLEADPKLRCLELFQKVSWVGPKKAEELHDNGLRSIEDLRAGGQHLLTEQARICLNRHEDITQRMPRSEAAEVEAVVTREAQSICPGAICQASFQATKACGSYRRGKSHCGDVDVLIRPPEGQEDVELLLELVSRLTAMGFITDTLAMPHGACKPGKPQSYMGICKLEGEGRLHRRVDIKVYPTSMFAFAVLYFTGSGHFNTSMRAFAKAKGLKLSDQGLFK--VNTVNGKEVHRFEDSCRCLH---EKDVFAALGLEWREPKDRD 2738
G+G+ + +++ E G + +LD + + LELF + G K A+ + G RS+ED+R Q LT Q I L + D +R+PR EA E+E V + AQ+ PG +C ACGSYRRGK+ CGDVDVL+ P+G+ +L L+ L GF+TD L + G+ Q Y+G+C+L G GR HRR+DI V P S FA A+LYFTGS HFN SMRA AK KG+ LS+ L V G +V S R L EKDVF LGL +REP +RD
Sbjct: 29 GIGKRMAEKIIEILESGHLRKLDHISESVPI--LELFSNIWGAGTKTAQMWYHQGFRSLEDIR--NQASLTTQQAIGLKHYNDFLERIPREEATEIEQTVQKSAQAFNPGLLCV-------ACGSYRRGKATCGDVDVLLTHPDGRSHQGILSRLLDSLRQQGFLTDDLVSQE---ENGQQQKYLGVCQLPGPGRRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNTQGLKVA----SGRVLPTPTEKDVFRLLGLPYREPAERD 299 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig7.14620.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig7.14620.1 >prot_C-linearis_contig7.14620.1 ID=prot_C-linearis_contig7.14620.1|Name=mRNA_C-linearis_contig7.14620.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1029bp MFTQQFRQLDACRSKLQSEVMAELAAETEEKRRETERLKADNKRRAAAVEback to top mRNA from alignment at C-linearis_contig7:3798831..3806531- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig7.14620.1 ID=mRNA_C-linearis_contig7.14620.1|Name=mRNA_C-linearis_contig7.14620.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=7701bp|location=Sequence derived from alignment at C-linearis_contig7:3798831..3806531- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig7:3798831..3806531- >mRNA_C-linearis_contig7.14620.1 ID=mRNA_C-linearis_contig7.14620.1|Name=mRNA_C-linearis_contig7.14620.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=6174bp|location=Sequence derived from alignment at C-linearis_contig7:3798831..3806531- (Chordaria linearis ClinC8C monoicous)back to top |