mRNA_C-linearis_contig107.1031.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig107.1031.1 vs. uniprot
Match: D7FMY7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMY7_ECTSI) HSP 1 Score: 2970 bits (7699), Expect = 0.000e+0 Identity = 1677/2214 (75.75%), Postives = 1830/2214 (82.66%), Query Frame = 3
Query: 69 MACKRSMDCTCPQCAAAAAEFSVEDLKQFSSSIKYDEEGDGQEGNDKPNATKAPPKXXXXXXXXXXXXXXXITSSDSSPP--IPETAPPPAAPPA-----------GEDGPLEARLTSKNWKERKAAYEQVQTLFQQAQSDDSDVFRDYAPFLKAMVQDSNASCLDVALDVLLVFADGYAKASELYSELAPAVVAKGLSGRPGTITRAEAALLKLIEVDTPDVVAATLLEGLSDKKPKVPPACVGILIKALELFGARAMPLKDLKAALPGMLSHKVVAVRQQGLALAAEIISWCGEPMLASVVSELRAGQKTDLDSLVKEKATGSPRVPTLYLRKDRPSASDEAGEKPKGAEAEAAFDPREFIEPVDILSKLPKTEFNQKLAATKWSEILEGLNIAVDMIGAVPKLTAGDYGDLVQKVKRLGDHSHVQVASTAHRLLSLLAEGLGQGFHPYFRSILGAMLLKLKDKKCVGVLGACLDKLYGNPHSLDQVVDEVVAALDPKKAIHARLAALGWISRCVAKSKPANEVATLATLAKATIRLVDDSDPKIREAGSATVAAIANASRGAKGPAPPVWSLVLELQTANARAFKRIRDQVDGAASSTTAQPNKAPPAPSQGRASAGRGSSSSITLEKSATGSXXXXXGTSSKPPSLRARAAPRGSSKPTPKNRVAPSSSSAGPRKPPASSAKGEENDDAEDEAITFTIEEAVEKLESFRIEGWQESILPGLRGTAWKEKVASIERLNQGVMSMSDPGNFLSPVIVVLGAHTKQFKDSNFNVLKASFLGISSLLEAAHAAGGAKGNRPAVSVVVAPAVEKLGDRKLQETTSSLLTTASESLGPSWVSRRVMKAAGQAKAPLVHSEALVWLHACVKDFGAGVLPAPQVVAFAVSELEHVNPKVRSSALELLGSMYHRLGPPMKALVPELRAALQSQVDGIFDKVGYDPAANSQVTRRAPAAGDAEQGDAPVGGGLPRIDLSTLLEKDCLTRMQCIKGKDAWKGRKAAIEEVVQACAKSGNHLEANRFMVEVLKALTPRLADSQSNLKPLTASAIAELACSLATDAGTKLTRIYAEPLLACVADNRKMMRDAAIAALEKVTTAGGSLHVPTAEALMGPVVVAMTNTVGRTELLTWIKTFLAQIPAGEGPTSLVSPLLVCMQDKSAGARQVAQECLSVLVGAGTVQRSRVRAGTRDFPPAVMRQLKPALEKILDASGDPSSGDAETGDTTVTVTSKIAAAPPAVVSKLVRGGPAAGGSSGPQTKRPSRSTTTAQKMESAPESDAIPLPTGGPLLSTNSKAKRLESEKRSRWFVSSDEPRDHQTSSLKALWAPLLQADAVDILFPSRVGSMECGTSGMELLSSALREQRASFMDHLDLIFKWISLRLCEKENVKAMGQLLQFLGDTFGALVEAQYRLEDAEVDALLPTLLEKSGQAKERFRVAIRALLTKIPLLCSYAKYSPLLLQQATASKNSRTRIACLLELSRCISADGPASALGKKGLKELAKHVDSDQAEVRSAALDAVESCYMGLDMDSARIHRLLGAVNDKTKTLIDERMKAADRKHGTKTASAGQASTRGARETGAAT-AGSTSEQRRGEPQLPPTPAKTXXXXXXXXXXXXXXXXXXXXXPVGGISEAHLEHSG--GHRASLGGLGADSNWGDLPAGGAGKIDISNS-SDDEGPFRFDCNALEVKLSPRSREREMSNAAADATFEALVTELEAGLLQCRTLLGTSPQDRAAAVDQIKGLSNWATAQAQRADG---EGVLEKHHPRLIMTLVRCMRLSFTGNAPVADGDTQYAQVAGTGGIDLELAPQVVTTLDDVCVLSPGSFDRPSLAALLGEVCLWLVEQRIGPRAQHTKYRSCDPYAQVQHKLNRIATASGSANSSVAMSALLDVMADAHTKSGGRQQHPEQVWGRGKRSLETKLVKVYVKLLARILRDSEKYNFGTNDQGSNELGAPDLPLVLRALHKYHVAENARDAVEQSSIEERNACDAAQRLVSMLCERLCSAWGSSAVVSAANRLRHESAGSETKSSVEAWTTTLGRCLVTSKENTADSLRRHSSPVLR-KSDRSNEIARLIGLVSAESQNLNGEGGDHGSAALNELKGYVQQWPEAQATLEEQVARLKPRFRSFILEGCRAQP--AQPVLRSTPLRGRIA-----AHRGQDSEGVAFE-------VKENVLRPSTGTEASHADQDTVPARSNNRLQEIRRRMGTLG 6605
M CKRSMDCTCPQCAAA+A+FSVEDLKQFSS+I Y EE EGND + ++ P XXXXXXXXXXXXXXX P +P AP PA P A GEDGPLE RL SKNWK+RKAAY+QV +L+QQA SDDSDVFRDYAPFLK MVQDSNASCLD ALD +L FADGY KA E ELAP +VAKGLSGRPGT++RAEA LLK +EVDTPDVVAA LLEGLSDKKPKVPPACVGIL A++LFGARAMPLKDLKAALPGM+SHKVV VRQQGLALAAEIISWCGEPMLASV SELR+ QKTDLD LVKEKATGSPRVPTLYLRKDRPS SDE G++ KG E FDPREFIEPVDILSKLPKTEFNQK+AATKWSEILEGLNIA++MIG VPKLTAGDYGD+VQK+KRLGDHSHVQVAST+HRLLSL+AEGLGQGFHPYFRSILGAML+KLKDKKC GVLG CLD++YGNPHSLDQVVDEVVAALD KKAIHAR+A LGWISRCVAKSKPA +ATL TLAKATIRLVDDSDPKIREAGSATVAAIANASRGAKGPAPPVW++VLELQTANARAFKRI+ QV+GA S+T QP K P AP QG+ SAG+ +S++ XXXXX SAG RKP A SAK E +DDA D+A++ T+EEAV+KL+ IEGW +SILPGLRGTAWKEKVASIER+ QGV S DPG+ L+PV++VL AHTKQFKDSNFNVLKASFLGI++LLEAAHAAG AKGN+ VS VVAPAVEKLGDRKLQETTSSLLT+A+ES GPSWV+RRVMKAAGQAKAPLVHSEAL WLHACVKDFGA VLPAPQVVAFAVSELEHVNPKVR+S+L+LLGSMYHRLGPPMKAL+PELRAALQSQVDG+F KVGYDP A++QV RRAP GD QG A GGGLPRIDLSTLLEKDCL RMQCIKGK+AWKGRKAAIEEVVQAC KSGNHLEANRFMVEVLKALTPRLADSQSNLKPL ASA+AE+A S+ D+ KLTRIYAEPLLACVADNRKMMRDAAIAALEKVT +GG+LHVPT EAL+GPVVVAMTNTVGR ELLTW+K+FLAQIP+GEGPTSLVSPLLVCMQDKSAGARQVAQECLSVLV AGTVQ SRVRAGTRDF PAVMRQLKPALEKIL+ SGD SG E DT ++ AAPP VVSKLVRGGP GGSSG QTKRP RST AQK+ES ES+ P +GGPLLST+SKAKRLESEKR+RWFVSSDEPRDHQTSSLKALW+PL ++DAVDILFP+RVGSMECGT GMELLS ALR+QR SFMD LDLIFKWISLRLCEKENVKAMGQLL FLGDTF ALV AQYRLED EVDALLPTLLEKSGQAKERFRVAIR LLTK+PLLCSYAKYSPLLLQ ATASKNSRTRIACLLELSRCI ADGPASALGKKGLKELAKHVDSDQAEVRSAALDAVE+CY+GLD DS+RIHRLLGAVNDKTKTLIDERMKAADRK+ +K S QA+TRG RE+ AA A SEQR + +LP XXX V + H E SG HRASLGGLGADS WGD +G ++ SDDEGPFRFDCNALEV+LSPRSR+RE SN AAD F +L+TEL+ GLLQCRTLL SPQDR+AAVDQIK LS+WATAQ QR DG E VLE+HH RLI TLVRC+RLSFTG+A VADGD YA+VAG GGIDLELAP+VVT LDDVCV+SP SFD PSLAALL EVCLWLVEQRIGPRAQH+ Y+SCDPYAQVQHKLNR+ATASGSAN VAMSALLDVMA+AH KS GRQ+ PEQV GRGKRSLETKL+KVYVKLLAR+LRDSEK +FG ND GS ELG LPLVLRALHKYH+AE RDAV S++E+R ACDAAQRLVSMLCERLCSA+GSSAVV +N +R E GSE+ +SVEAWTTTLGRCLVT KENTAD RRHSS V K+D EIARLIGLVSAESQN+ G+G D GSAAL EL+ YVQ+WPEAQ+TLE QV RLKPRFR FILEGC+AQ A+ LRSTPLRGR+A RGQ + +A + +N L+P GT+ SHADQD RS NRLQEIRRRMG LG
Sbjct: 1 MECKRSMDCTCPQCAAASAQFSVEDLKQFSSAIDYGEE----EGNDSTSPSEPQPXXXXXXXXXXXXXXXXXXXXXXXPKAAVPTAAPQPAVPVAASQGGGAAGDTGEDGPLEGRLVSKNWKDRKAAYDQVLSLYQQAMSDDSDVFRDYAPFLKGMVQDSNASCLDAALDAVLAFADGYVKACEHAPELAPGIVAKGLSGRPGTVSRAEAVLLKFMEVDTPDVVAAVLLEGLSDKKPKVPPACVGILANAIQLFGARAMPLKDLKAALPGMISHKVVPVRQQGLALAAEIISWCGEPMLASVTSELRSAQKTDLDGLVKEKATGSPRVPTLYLRKDRPSESDEVGDESKGPAVEEVFDPREFIEPVDILSKLPKTEFNQKVAATKWSEILEGLNIAIEMIGDVPKLTAGDYGDMVQKLKRLGDHSHVQVASTSHRLLSLMAEGLGQGFHPYFRSILGAMLVKLKDKKCAGVLGTCLDRVYGNPHSLDQVVDEVVAALDTKKAIHARVATLGWISRCVAKSKPAVGIATLTTLAKATIRLVDDSDPKIREAGSATVAAIANASRGAKGPAPPVWAVVLELQTANARAFKRIQGQVNGAGSNTPTQPEKVPSAPPQGQRSAGKSTSAAXXXXXXXXXXXXXXXX-----------------------XXXXXXXXSAGQRKPSAPSAK-ETSDDAVDDAVSITLEEAVDKLDGAGIEGWGDSILPGLRGTAWKEKVASIERITQGVQS--DPGSLLTPVVMVLAAHTKQFKDSNFNVLKASFLGITTLLEAAHAAGVAKGNQTVVSTVVAPAVEKLGDRKLQETTSSLLTSAAESFGPSWVARRVMKAAGQAKAPLVHSEALTWLHACVKDFGAAVLPAPQVVAFAVSELEHVNPKVRTSSLDLLGSMYHRLGPPMKALLPELRAALQSQVDGVFSKVGYDPTADAQVVRRAPTVGDEVQGQAAAGGGLPRIDLSTLLEKDCLPRMQCIKGKEAWKGRKAAIEEVVQACGKSGNHLEANRFMVEVLKALTPRLADSQSNLKPLAASALAEVASSVGADSSPKLTRIYAEPLLACVADNRKMMRDAAIAALEKVTLSGGTLHVPTTEALIGPVVVAMTNTVGRIELLTWLKSFLAQIPSGEGPTSLVSPLLVCMQDKSAGARQVAQECLSVLVAAGTVQPSRVRAGTRDFQPAVMRQLKPALEKILENSGDAGSGVVEAADTAAP-SAATQAAPPTVVSKLVRGGPHTGGSSGVQTKRPLRSTI-AQKIESTSESEGTPSSSGGPLLSTSSKAKRLESEKRTRWFVSSDEPRDHQTSSLKALWSPLARSDAVDILFPTRVGSMECGTPGMELLSCALRDQRVSFMDQLDLIFKWISLRLCEKENVKAMGQLLHFLGDTFDALVAAQYRLEDMEVDALLPTLLEKSGQAKERFRVAIRGLLTKVPLLCSYAKYSPLLLQ-ATASKNSRTRIACLLELSRCIGADGPASALGKKGLKELAKHVDSDQAEVRSAALDAVEACYLGLDKDSSRIHRLLGAVNDKTKTLIDERMKAADRKNISKAPSGSQANTRGLRESAAAAPAIPDSEQRGQQARLPXXXXXXXXXGGALEKPTPQALASTPARTV----DTHSERSGDDNHRASLGGLGADSTWGDGSSGALLNTSSGHAGSDDEGPFRFDCNALEVQLSPRSRQRETSNTAADEEFNSLLTELDDGLLQCRTLLNISPQDRSAAVDQIKNLSSWATAQGQRTDGTDGEAVLERHHSRLIETLVRCLRLSFTGSAAVADGDAHYAEVAGAGGIDLELAPEVVTALDDVCVVSPRSFDAPSLAALLEEVCLWLVEQRIGPRAQHSNYKSCDPYAQVQHKLNRVATASGSANPLVAMSALLDVMANAHAKSAGRQE-PEQVSGRGKRSLETKLLKVYVKLLARLLRDSEKDSFGRNDGGSKELG---LPLVLRALHKYHLAEKQRDAVNHSNLEDRTACDAAQRLVSMLCERLCSAFGSSAVVGTSNVMREEE-GSESAASVEAWTTTLGRCLVTMKENTAD--RRHSSQVAPIKTDHVAEIARLIGLVSAESQNV-GDGSD-GSAALTELQAYVQRWPEAQSTLEHQVDRLKPRFRQFILEGCKAQQQTAEAGLRSTPLRGRMADVHGSLRRGQAAATLAQDDGARKSLTFDNGLQP--GTQVSHADQDDT--RSTNRLQEIRRRMGVLG 2164
BLAST of mRNA_C-linearis_contig107.1031.1 vs. uniprot
Match: A0A836C9S4_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9S4_9STRA) HSP 1 Score: 939 bits (2427), Expect = 1.100e-293 Identity = 738/2058 (35.86%), Postives = 1042/2058 (50.63%), Query Frame = 3
Query: 360 PLEARLTSKNWKERKAAYEQVQTLFQQAQS-DDSDVFRDYAPFLKAMVQDSNASCLDVALDVLLVFADGYAKASELYSELAPAVVAKGLSGRPGTITRAEAALLKLIEVDTPDVVAATLLEGLSDKKPKVPPACVGILIKALELFGARAMPLKDLKAALPGMLSHKVVAVRQQGLALAAEIISWCGEPMLASVVSELRAGQKTDLDSLVKEKATGSPRVPTLYLRKDRP-----SASDEAGEKPKGAEAEAA--FDPREFIEPVDILSKLPKTEFNQKLAATKWSEILEGLNIAVDMIGAVPKLTAGDYGDLVQKVKRLGDHSHVQVASTAHRLLSLLAEGLGQGFHPYFRSILGAMLLKLKDKKCVGVLGACLDKLYGNPHSLDQVVDEVVAALDPKKA--IHARLAALGWISRCVAKSKPANEVATLATLAKATIRLVDDSDPKIREAGSATVAAIANASRGAKGPAPPVWSLVLELQTANARAFKRIRDQVDGAASSTTAQPNKAPPAPSQGRASA-GRGSSSSITLEKSATGSXXXXXGTSSKP-----------PSLRARAAPRGSSKPT----PKNRVAPSSSSAGPRKPPASSAKGEENDDAEDEAITFTIEEAVEKLESFRIEGWQESILPGLRGTAWKEKVASIERLNQGVMSM-SDPGN-FLSPVIVVLGAHTKQFKDSNFNVLKASFLGISSLLEAAHAAGGAKGNRPAVSVVVAPAVEKLGDRKLQETTSSLLTTASESLGPSWVSRRVMKAAGQAKAPLVHSEALVWLHACVKDFGAGVLPAPQVVAFAVSELEHVNPKVRSSALELLGSMYHRLGPPMKALVPE-LRAALQSQVDGIFDKVGYDPAANSQVTRRAPAAGDAEQGDAPVGGGLPRIDLSTLLEKDCLTRMQCIKGKDAWKGRKAAIEEVVQACAKSGNHLEANRFMVEVLKALTPRLADSQSNLKPLTASAIAELACSLATDAGTKLTRIYAEPLLACVADNRKMMRDAAIAALEKVTTA-GGSLHVPTAEALMGPVVVAMTNTVGRTELLTWIKTFLAQIPAGEGPTSLVSPLLVCMQDKSAGARQVAQECLSVLVGAGTVQRSRVRAGTRDFPPAVMRQLKPALEKILDASGDPSSGDAETGDTTVT------------------------------------------------VTSKIAAAPPAVVSKLVRGGPAAGGSSGPQTKRPSRSTTTAQKMESAPESDAIPLPTGGPLLSTNSKAKRLESEKRSRWFVSSDEPRDHQ--TSSLKALWAPLLQADAVDILFPSRVGSMECGTSGMELLSSALREQRASFMDHLDLIFKWISLRLCEKENVKAMGQLLQFLGDTFGALVEAQYRLEDAEVDALLPTLLEKSGQAKERFRVAIRALLTKIPLLCSYAKYSPLLLQQATASKNSRTRIACLLELSRCISADGPASALGKKGLKELAKHVDSDQAEVRSAALDAVESCYMGLDMDSARIHRLLGAVNDKTKTLIDERMKAADRKH-------------------------------------------GTKTASAGQASTRGARETGAATAGSTSEQRRGEPQLPPTPAKTXXXXXXXXXXXXXXXXXXXXXPVGGISEAHLEHSGGHRASLGGLGAD---SNWGDLP---AGGAGKIDI--SNSSDDEGPFRFDCNALEVKLS-----------------------------------------PRS-----REREMSNAAADATFEALVTELEAGLLQCRTLLGTSPQDRAAAVDQIKGLSNWATA--QAQRADGEGVLEKHHPRLIMTLVRCMRLSFTGNAPVADGDTQYAQV--AGTGGIDLELAPQVVTTLDDVCVLSPGSF------DRPSLAALLGEVCLWLVEQRI--GPRAQHTKYRSCDPYA----------QVQHKLNRIATASG-SANSSVAMSALLDVMADAHTKSGGRQQHPEQVWGRGKRSLETKLVKVYVKLLARILRDSEKYNFGTNDQGSNELGAPDLPLVLRALHKYHVAENARDAVEQSS 5933
PL LTSK+WK RK A+E + F A DS VF +YAPFL V DS+A+CLD A+D +L +AD KA+ LA +++KG S R T +AEAALLK +EVDTP+VV LL+GL+DKKPKVPPAC+ + KA + FGA +PLK+L+ L G+L HK VR LAL E++ W G LA V+ ELR+ QK ++++ K+ G+ + P++YLRK RP +A +A E E +AA FD R+ IE VD+L +L KTEFN K+A KWSE + GL IA+D+IG VPKLT+GDY D V++ + L DHSHV V +A +LL LAEGL F P+ R + L KL DKKC + L+++YGNP +L+QV+++V+AAL+PKK +R++ LGWI CV + +PA + TL L + L+ DSDP +R A S AAI A+R G PVW++ L+L+ +NARAFK+I +Q+ G ++ A P A RG S S + GS G + P P A A +GS + APS+++A KP A E+DD + E + EEA KL I +S+ GL+ W+++ A++E L+ + ++ SD + + V+ ++K FKD+NFNV+K + I ++ A AAG A ++ +S V+ ++K+ DRK ++ L+ A+E++GP++V RRV K KAP H +ALVW+ +FGAG +P +VAFAVSEL++ NPKVRSSA+ELLG MYH+LGPP+KAL+PE ++AA +S ++ F+K G+D A + TR +G A GGGLPR DL++LL KDCL M GKDAWKGRKAAIEEV+ AC +SG+++EAN+ EVLKAL RL DSQSNLKPL A AIAEL SL +A + R +EPLLA VADN+K+MRDAA+ L+K+ G+ + PT EA + P+ A+ NTVGR ELL W L + LVSPLL CMQDK+ RQ+A+ECL LV G +V+ GTRDF PAV+ QLK L ++ A S+ A D T TS+ A + PA AGGS+ E D + +K +R E ++R + + DE D + T L++ W PLL + A LFP R GSMECG G +L L Q+ ++MD LDL+ KW +LRLC+KENV A +LL+ L T L + +L + EV+ L P +LEKSG +KERFR A+++++T + + KY PLLL SKNSR+R+ CL E++R G +G+KGLK+L + ++ LG ++DK K+ I+ER+KA ++ G K+AS G GA +G +GS G +L T +++ +G E L RASLG L + S D+ A GAG + + +++D +GPF+F+ +ALEV L PR+ R + M+ + D A+ +LEA L+ + + + AA D IK + N ATA QAQR L H ++ LV+C+ +SF + D AQ +G G IDL L V+ L V PG F L LL VC L ++R+ G H S P QV +N++A A+ S ++SVA+SA+++++A H + G + Q+ K KVY KLL R++ +K + DL L++ L + +A NA A++ S
Sbjct: 77 PLPEELTSKDWKVRKPAFEALTQCFTLAALVGDSAVFNEYAPFLSKAVGDSHAACLDAAMDAVLAYADAAPKATATAEALAGDIISKGFSARGTTPAKAEAALLKFMEVDTPEVVTLALLQGLNDKKPKVPPACLACITKAADAFGAATLPLKELRGKLKGVLEHKDTNVRTAALALVTELVKWVGVAPLAGVIDELRSAQKAEIEAATKDLVPGACK-PSVYLRKLRPKPKAAAAGGDAAEDDGDVEVDAAPAFDARDMIEAVDLLERLKKTEFNAKMAEEKWSEKVAGLKIALDVIGDVPKLTSGDYHDFVKQARTLTDHSHVMVVCSAFKLLGKLAEGLRGEFGPFARGVCKTALGKLADKKCNKTVCETLEQVYGNPLTLEQVLEDVLAALEPKKVNPTLSRVSILGWICTCVKRPQPAVDAQTLVQLMGGAVGLLADSDPAVRTAASDAAAAIILAARRVCGG--PVWAVALDLKASNARAFKKISEQIGGEGTAAAAAPPXXXXXXXXXXTGAKARGRSGSTSSRPG--GSTPRGNGNDAPPAAXXXXXXXXKPKAAAPMARKGSQSSLRARMERKTGAPSAAAAPKGKPKXXXA---EDDDGDSEPTAMSGEEAWAKLTEKGIADC-DSMAQGLQSAKWQDRKAALEALSSALAALPSDTASECFGAAVTVVRENSKNFKDANFNVVKGA---IDAVTAAVTAAGDAPVSKAHLSSVLCAVLDKIADRKQHDSVCGLMMAAAEAVGPAFVVRRVCKLVAGIKAPPAHVDALVWVMQAFAEFGAGAMPVQVLVAFAVSELDNGNPKVRSSAVELLGGMYHQLGPPLKALLPEDIKAASRSAIEAQFEKTGFDAGAAQKATRTVKGSGGAAAAGG-TGGGLPRSDLASLLSKDCLKDMASTDGKDAWKGRKAAIEEVIAACQRSGHYMEANKSAAEVLKALRARLGDSQSNLKPLAAGAIAELMGSLDPEASGRYVRAVSEPLLAGVADNKKLMRDAALQCLDKIVCGKDGATNAPTFEAFLTPLGAALVNTVGRAELLQWTARHLPALKGCAEGVCLVSPLLTCMQDKAGATRQMAEECLVSLVATGCANAGQVKHGTRDFTPAVILQLKAPLTRVYAAGNSNSNSGAGAQDADATDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRSNSTSRAAGSKPARTMPAKGASFNAGGSAAXXXXXXXXXXXXXXXXXXX-EPDVM--------RRNANKPRRAEVDRRLQRWACFDETHDKEALTELLRSQWTPLLSSSAAAKLFPVRTGSMECGNEGFAMLEGMLEAQQEAYMDSLDLVLKWFTLRLCDKENVMAFAKLLEVLEKTLVTLKQQSVQLLEYEVEVLAPCVLEKSGHSKERFRAALQSIVTLLSEVSPQDKYVPLLLATVGTSKNSRSRVLCLEEVARLTGQFG-LGPVGRKGLKDLVRFAEN------------------------------LGPISDKVKSSIEERIKAKNKLRQPSISAAXXXXXXXXXXXXXXXXQSPGGRRLKSAASNNVPAAAGAKSASRGNG---GASVSGNGLSGS------GRSRLSTTSSRSRGS-------------------LGDGDEMSLLR----RASLGKLHLELDPSLCVDISSEHAHGAGAMTMVDDDNADFDGPFKFNDSALEVPLLSPVRAKATAAPHPADPSAVAIKTPSPPRRHSSSYSAGSGSLPRTGSGVLRAKPMAESDVDREVLAMCGKLEA-LVCLKHPIKDTKSAYVAAKDTIKAVYNMATAATQAQRQQLSSSLHAHV--VLERLVQCLEVSFVCAPAQDERDAINAQTPGSGAGAIDLNLLSTVLAALMAVVREMPGVFVGGYCLAPHLLRQLLQVVCPRLADERLSGGHTGAHEGSTSPGPMTAAGPYKEVALQVHRAMNKLAIAAAESCDASVALSAVVELLARVHAR--GAVESANQL----------KPSKVYAKLLLRLINMEKKR--------PDAFSTLDLDLLVPPLAHF-LARNAPTAIDSGS 2025
BLAST of mRNA_C-linearis_contig107.1031.1 vs. uniprot
Match: D0NPV1_PHYIT (Cytoskeleton-associated protein, putative n=4 Tax=Phytophthora infestans TaxID=4787 RepID=D0NPV1_PHYIT) HSP 1 Score: 581 bits (1498), Expect = 3.220e-168 Identity = 516/1649 (31.29%), Postives = 787/1649 (47.73%), Query Frame = 3
Query: 75 CKRSMDCTCPQCAAAAAEFSVEDLKQFSSSIKYDEEGDGQEGNDKPNATKAPPKXXXXXXXXXXXXXXXITSSDSSPPIPETAPPPAAPPAGEDGPLE-----------------------------------------------------ARLTSKNWKERKAAYEQVQTLFQQAQSDDSDVFRDYAPFLKAMVQDSNASCLDVALDVLLVFA---DGYAKASELYSELAPAVVAKGLSGRPGTITRAEAALLKLIEVDTPDVVAATLLEGLSDKKPKVPPACVGILIKALELFGARAMPLKDLKAALPGMLSHKVVAVRQQGLALAAEIISWCGEPMLASVVSELRAGQKTDLDSLVKEKATGSPRVPTLYLRKDRPSASDEAGEKPKGA------EAEAAFDPREFIEPVDILSKLPKTEFNQKLAATKWSEILEGLNIAVDMIGAVPKLTAGDYGDLVQKVKRLGDHSHVQVASTAHRLLSLLAEGLGQGFHPYFRSILGAMLLKLKDKKCVGVLGAC---LDKLYGNPHSLDQVVDEVVAALDPKK--AIHARLAALGWISRCVA-KSKPANEVATLATLAKATIRLVDDSDPKIREAGSATVAAIANASRGAKGPAPPVW--SLVLELQTANARAFKRIRDQVD-GAASSTTAQPNKAPPAPSQGRASAGRGSSSSITLEKSATGSXXXXXGTSSKPPS----LRARAAPRGSSKPTPKNRVAPS------------SSSAGPRKPPASSAKGEENDDAEDE---AITFTIEEAVEKLESFRIEGWQESILPGLRGTAWKEKVASIE------RLNQGVMSMSDPGNFLSPVIVVLGAHTKQFKDSNFNVLKASFLGISSLLEAAHAAGGAKGNRPAVSVVVAPAVEKLGDRKLQETTSSLLTTASESLGPSWVSRRVMKAAGQAKAPLVHSEALVWLHACVKDFGAGVLPAPQVVAFAVSE--LEHVNPKVRSSALELLGSMYHRLGPPMKALVPEL-----RAALQSQVDGIFDKVGYDPAANSQVTRRAPAAGDAEQGDAPVGGGLPRIDLSTLLEKDCLTRMQCIKGKDAWKGRKAAIEEVVQACAKSGNHLEANRFMVEVLKALTPRLADSQSNLKPLTASAIAELACSLATDAGTKLTRIYAEPLLACVADNRKMMRDAAIAALEKVTTAGGSLHVPTAEALMGPVVVAMTNTVGRTELLTWIKTFLAQIPAGEGPTSLVSPLLVCMQDKSAGARQVAQECLSVL---VGAGTVQRSRVRAGTRDFPPAVMRQLKPALEKILDASGDPSSGDAETGDTTVTVTSKIAAAPPAVVSKLVRGG-----PAAGGSSGPQTK--RPSRSTTTAQKMESAPESDAIPLPTGGPLLSTNSKAKRLESEKRSRWF--VSSDEPRDHQTSSLKALWAPLLQADAVDILFPSRVGSMECGT-SGMELLSSALREQRASFMDHLDLIFKWISLRLCEKENVKAMGQLLQFLGDTFGALVEAQYRLEDAEVDALLPTLLEKSGQAKERFRVAIRALLTKIPLLCSYAKYSPLLLQQATASKNSRTRIACLLELSRCISADGPASALGKKGLKELAKHVDSDQAEVRSAALDAVESCYMGLDMDSA-RIHRLLGAVNDKTKTLIDERMK 4670
C R+ C C CA + K SS+I Y G+G+E + +A PP+ ++S P T PPPA D P+E +L+ KNWK RK +E+++TLF+Q S + R K M +D+NAS ++ + +L + + + K ++ + V KG S RPG + I + LLEG +++KPKVPPAC ++ AL+ +G R +PL+ +K ALP ++ V VR +++ EI W G ++ +V+ LR Q+T+ + K+ G PT ++R +P+ + AG KP A AFDPR+F E VD+L+KLPKTEF KLA KWSE +E L I +++IG VPKL G+Y +LV +K L + S+V + + + + LA+GL + F Y R + +L KL DKK V +L A LD + ++D +++++ A D K A AR+ + +++R V + N+ + ++ +DDSDPK+REAG + A+ G W S++ E+ N RAFK I+ + GAAS+ +++P A + + S G+ + P + + AP G +P+ K R PS S +A RKP A S G + D AI+ T EEA + + +E W SI G + W E+ A+IE R N GVM++ + + L K FKDSN NVLK++F + +L E A AG K R V +V A +K+GDRK E +L E+ P++ + +++ + + PL H EALV L CVKDFG + V+ +A LE NPKVRS+A LLG+MY +LGP AL+P L + AL V+ F KVG+DPA +R + DA A G R+D+S+ + K+ L M+ K K AWK R A++ V C +G +E R + E L+ L RL DS +NLK A+ I +A S+ D K++++ L+A VADN+K M+ AA+ AL K E+L+ P+ ++NTVGR ELL W L + + + LV+P + CM DKS+ AR+ AQ L + VG V G RD PA MR LKP L+K+ D D S G + + TV++ + P V S L RGG A GS+ +++ RPS APE+ P L T++K RL + ++W +S + + S ++A W P L + LF S+E G + M+ L+ + Q + LDL+ KW SLR+ + NV+A+ +LL+ L F L E+ Y+LED E LLP LL++SGQ+K RFRV R ++ + + S KY P L++ SKN ++R C+ + + G LG+K +K++ K V + + E+R +A++ + + YM + + + R G + L++ R+K
Sbjct: 5 CLRNASCKCSMCAGFDVASLMNISKSISSNINY---GEGEEEDGVQDAAPPPPRFGGVANSPPVPSQKQSVVANSPPLRAATRPPPAPQSVHMDTPMEDITIADYTAQDVVMESSPTLKDAQMESVASTLSNMEVDSPGGPGDAVSIDAVLPKLSDKNWKVRKEGFEELKTLFEQPGVKTS-LVRPAMELFK-MCEDANASAMEAGIAAVLAYTLNVEPFDK--DIVGGVMARVTDKGFSARPGIVKLCTELTDAFIAAGAAEETVTALLEGTNNRKPKVPPACATCVLDALKEYGPRVVPLQAIKTALPKLMEG-AVKVRPIAMSIMVEIHRWTGPALVQDIVANLRQAQQTEFEEQTKDVTAGQA-APTKFVRGAKPAKA--AGGKPSSGVSHTAEPAAPAFDPRDFAETVDLLAKLPKTEFKTKLALPKWSEKVEALKIVLELIGPVPKLANGEYYELVSTLKALTNDSNVNIVAKSIEVFGALADGLRKNFTQYARMMFPELLRKLSDKKSV-ILNATNKTLDLFLQHAMTIDLMMEDLRLACDASKNKAPPARVQTMAFLTRAVENRYVDLNDKVLVVAFGAMFMKGIDDSDPKVREAGQKDFIVLLQATEQTAG-----WLQSMLDEISRKNPRAFKVIQKALGAGAASTASSRPGSAQSSRPGSXTXXXXXXXXXXXXXXGSAASRSSFGGSKASEPDGDVEMDSTPAPGGLRRPSLKKRGPPSRLGAKPGTPSAQSKAASSRKPAAGSNAGSSGGASTDFTPIAISVTAEEAEDVIAELELENWS-SIQEGFASSKWMERKAAIEALEEYARANSGVMTV----RVIEAFAMYLSTQVKDFKDSNINVLKSAFQAVGTLAETA--AG--KFPRGVVCLVTPRACDKIGDRKANEAVRGMLVQFCEATSPAYTTGCMIEYMPKVRLPLAHIEALVVLSDCVKDFGVSICNPRAVIDYAKGPQGLEGSNPKVRSAATALLGTMYSQLGP---ALLPILNLESWKPALAKTVEDEFKKVGFDPAKAQATIKRQVKSQDAAPAAADPGALFGRVDVSSQITKELLEDMKNEKDKVAWKKRAEAMDSVQAICEGAGCAIEFTRPVQEALRQLKARLNDSNANLKVKAANVIGVVAASVGPDIA-KMSKVLGASLVAGVADNKKTMQAAAVQALHKWVRHNNETSSVCVESLLAPLSEGLSNTVGRAELLGWAVEHLQKCEKLD-LSCLVAPTVQCMMDKSSEAREKAQLVLIEVMKSVGKDVV----FTTGCRDIKPAAMRALKPLLQKVSDTV-DTSGGSS----LSATVSAPAPSVAPPVASGLERGGLKRRASVAAGSTPVKSRLTRPSSLRAPPAAASLAPETSTKTAPL---LKMTSNKPARLSKGQYNKWIFETTSTSEMNARKSEIEAEWKPFLSPEFHAKLFAP---SLEKGMLAAMDELTLCVVHQPDEVISALDLVMKWCSLRIVDN-NVQALAKLLEVLVKLFEMLRESGYQLEDVEAAILLPYLLQESGQSKPRFRVRFRDVMKLVVAVYSPDKYVPYLMECFNGSKNMKSRCECIDLVEYIVGLHG-YQVLGRKCIKDVGKFVVAHEKELRESAINTLVAVYMRTEGGNPDKFFRFAGITTQQGMDLLNARLK 1605
BLAST of mRNA_C-linearis_contig107.1031.1 vs. uniprot
Match: A0A2D4C1Y1_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C1Y1_PYTIN) HSP 1 Score: 571 bits (1472), Expect = 1.960e-161 Identity = 494/1508 (32.76%), Postives = 736/1508 (48.81%), Query Frame = 3
Query: 369 ARLTSKNWKERKAAYEQVQTLFQQ--AQSDDSDVFRDYAPFLKAMVQDSNASCLDVALDVLLVFA---DGYAKASELYSELAPAVVAKGLSGRPGTITRAEAALLKLIEVDTPDVVAATLLEGLSDKKPKVPPACVGILIKALELFGARAMPLKDLKAALPGMLSHKVVAVRQQGLALAAEIISWCGEPMLASVVSELRAGQKTDLDSLVKEKATGSPRVPTLYLRKDRPSASDEAGEKPKG------AEAEAAFDPREFIEPVDILSKLPKTEFNQKLAATKWSEILEGLNIAVDMIGAVPKLTAGDYGDLVQKVKRLGDHSHVQVASTAHRLLSLLAEGLGQGFHPYFRSILGAMLLKLKDKKCV--GVLGACLDKLYGNPHSLDQVVDEVVAALDP--KKAIHARLAALGWISRCVAKSKP-ANEVATLATLAKATIRLVDDSDPKIREAGSATVAAIANASRGAKGPAPPVWSLVLELQTANARAFKRIRDQ--VDGAASSTTAQPNKAPPAPSQGRASAGRG--------SSSSITLEKSATGSXXXXXGTSSKPPSLRARAAPRGSSKPTPKNRVAPSSSSAGPRKPPASSAKGEENDDAEDEAIT-FTIEEAVEKLESFRIE----GWQESILPGLRGTAWKEKVASIERLN----QGVMSMSDPGNFLSPVIVVLGAHTKQFKDSNFNVLKASFLGISSLLEAAHAAGGAKGNRPAVSVVVAPAVEKLGDRKLQETTSSLLTTASESLGPSWVSRRVMKAAGQAKAPLVHSEALVWLHACVKDFGAGVLPAPQVVAFAVSEL--EHVNPKVRSSALELLGSMYHRLGPPMKALVPEL-----RAALQSQVDGIFDKVGYDPAANSQVTRRAPAAGDAEQGDAPVGGGLPRIDLSTLLEKDCLTRMQCIKGKDAWKGRKAAIEEVVQACAKSGNHLEANRFMVEVLKALTPRLADSQSNLKPLTASAIAELACSLATDAGTKLTRIYAEPLLACVADNRKMMRDAAIAALEKVTTAGGSLHVPTAEALMGPVVVAMTNTVGRTELLTWIKTFLA---QIPAGEGPTSLVSPLLVCMQDKSAGARQVAQECLSVL---VGAGTVQRSRVRAGTRDFPPAVMRQLKPALEKILDASGD-----------PSSGDAETGDTT-----VTVTSKIAAAPPAVVSKLVRGGPAAGGSSGPQTKRPSRSTTTAQKME-SAPESDAI----PLPTGGPLLSTNSKAKRLESEKRSRWF---VSSDEPRDHQTSSLKALWAPLLQADAVDILFPSRV--GSMECGTSGMELLSSALREQRASFMDHLDLIFKWISLRLCEKENVKAMGQLLQFLGDTFGALVEAQYRLEDAEVDALLPTLLEKSGQAKERFRVAIRALLTKIPLLCSYAKYSPLLLQQATASKNSRTRIACLLELSRCISADGPASALGKKGLKELAKHVDSDQAEVRSAALDAVESCYMGLDMDSARIHRLLGAVNDKTKTLIDERMK 4670
++++ KNWK RK AYE V+ + +Q ++DD D P M +D+NAS ++ + +L + + + K + S + VV KG + RPGT+ ++ IE D A L+EG +KKPKVPPACV +++ L+ FG R +P++ +KAALP + V VR L + AEI W G ++ +VS LR Q+T+ +SL KE G + PT ++R RP A + A A A DPREF E V++L KLPKTEF KLA KWSE +EGL I +D++G+VPKL GDY +LV +K L + S+V + + + +L +LA+GL + F Y R + ++ KL DKK V + LD+ + ++D ++D++ LDP KA R+ LG+++RCV K + A + +DD DP +R+A ++ + A+ + + L+ ++ N RAFK I+ V GA S+ +++P S ++SAT + S PP PRG K P +A PRKP ASS+ N A T F+I A E E +E W ++ G W E+ A+IE+L Q +MS + + V LG K FKDSN NVLK++F + + E+A K R V VV A +K+GD K ET +++ E+ PS+V ++ KAPL H EAL+ + CV DFG V ++ + L E NPKVRS A+ +LG MY +LGP AL+P L + AL S V+ F KVG+DPA + +R D A G R+D+S + K+ L M+C + K AWK R AA+E V C +G +E + ++E+LKAL RL+DS +NLK A I +A S+ + +K++++ LL+ V+DN+K M+ A+I AL K E+L+ V A+ N VGR ELL+W L ++ G LV+P + C+ DKS+ AR AQ LS + VG + + G RD PA MR LKP +EK ++ P++ A T T S + A + S+L R SS P S+S M P SD + P PTG L K RL + S+W VS E + ++ W P L + LF V G M+ M L + +Q + LDL+FKWI+LRL + NV A+ +LL+ L F L Y+L+D E LLP LL++SGQ+K RFRV R ++ + + Y L + SKN ++R C+ + I G +A+GK+ +KE+ K V + ++R +A++A+ + ++ D D R RL G + + LI ++K
Sbjct: 233 SKISDKNWKVRKEAYEHVKAICEQPGVRTDDVSPILDLFP---KMCEDANASAMEAGIQAVLAYTTKVEPFFKG--IVSGVMKRVVDKGFASRPGTVXLCXELVMAFIEAGAADDTVAALIEGTKNKKPKVPPACVSSILEGLKAFGPRVIPIQTVKAALPTLCESTVNGVRPVALNVIAEIHRWTGPTLVQDIVSNLRQAQQTEYESLTKEIVPGQAQ-PTKFVRGSRPPTVATARGAVRNSAASGAAMAPGAIDPREFAETVNLLEKLPKTEFRAKLAHPKWSEKVEGLKIILDLVGSVPKLANGDYYELVNTLKILSNDSNVNIVAKSVEVLGVLADGLRKNFTQYARMMFPELMKKLSDKKSVILNAVNNTLDQFLQHSMTIDMMMDDIRINLDPGKSKAPQTRVQTLGFLTRCVEKRMVNLGDQALVNDFGAMVSSAIDDVDPSVRKAAVDSLVVLVKATDQTR---LFLQGLLDDVSRKNPRAFKTIQQGLGVAGAGSAPSSRPXXXXXXXXXXXXXXXXXXXXXXXDIDMSEAPAQQSAT--------SRSIPPK------PRGPPSRFAKAADGPKPPAAQPRKPVASSSAS--NTAASSSEFTPFSISIAPEDAEPILLELNMPQWS-AMSEGFGSAKWMERKAAIEQLEDFAKQNTAAMSV--RVIEAMTVFLGKQVKDFKDSNINVLKSAFQAVGTFAESA----ATKFPRGVVCAVVPAAADKIGDSKAAETIRNMMLQFCEATSPSYVLGCLINHMTNVKAPLAHIEALLVISECVNDFGVSVCNPRMIIDYVKGGLGLESSNPKVRSGAISVLGVMYTQLGP---ALLPILDLGSWKPALASTVEAEFKKVGFDPAKATSGIKRQVKDDDGSAKSADPGALFGRVDISAQVTKELLADMKCEEDKAAWKKRLAAMESVQSICESAGCAIEFTKPVMELLKALKARLSDSNANLKVKAAQVIGVVASSIGPEV-SKMSKLLGSALLSGVSDNKKNMQAASIDALHKWVRHNNQTSTSCVESLLPSVSEALMNPVGRAELLSWTAEHLRGCERLDLG----CLVNPTIQCLMDKSSEARDKAQLVLSEVMKSVGKDFI----LSTGCRDIKPAQMRTLKPLIEKASESIASQCMNSSSPVQQPAASQAIITSTQHDIQPATDASSVPVASSIIPSRLGRT------SSLPSRLSGSKSQLARPGMSFRGPASDHVQTDEPSPTGPMLKMNTGKTSRLAKGQFSKWIFDPVSQSEMATRK-GEIEVEWRPYLSPELHAKLFAPSVEKGMMDA----MSDLMVCVTQQPQDIIAALDLVFKWITLRLVDN-NVHALAKLLELLVKLFEFLKSVNYQLDDVEAAILLPYLLQESGQSKPRFRVRFRDVMRLVVEVYRSDNYIGYLTECFNTSKNMKSRCECIDVVDFIIKTYG-VNAVGKRCIKEIGKFVTVHEKDLRDSAINALITAFLKGDGDMDRFLRLTGVTSQQGIDLITTKIK 1683
BLAST of mRNA_C-linearis_contig107.1031.1 vs. uniprot
Match: A0A662XMK5_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XMK5_9STRA) HSP 1 Score: 564 bits (1453), Expect = 5.280e-161 Identity = 484/1544 (31.35%), Postives = 755/1544 (48.90%), Query Frame = 3
Query: 321 APPPAAPPAGEDGPLEA---RLTSKNWKERKAAYEQVQTLFQQAQSDDSDVFRDYAPFLKAMVQDSNASCLDVALDVLLVFADGYAK-ASELYSELAPAVVAKGLSGRPGTITRAEAALLKLIEVDTPDVVAATLLEGLSDKKPKVPPACVGILIKALELFGARAMPLKDLKAALPGMLSHKVVAVRQQGLALAAEIISWCGEPMLASVVSELRAGQKTDLDSLVKEKATGSPRVPTLYLR-KDRPSASDEAGEKPKGA--------EAEAAFDPREFIEPVDILSKLPKTEFNQKLAATKWSEILEGLNIAVDMIGAVPKLTAGDYGDLVQKVKRLGDHSHVQVASTAHRLLSLLAEGLGQGFHPYFRSILGAMLLKLKDKKCVGVLGAC---LDKLYGNPHSLDQVVDEVVAALDPKK--AIHARLAALGWISRCVAKSK-PANEVATLATLAKATIRLVDDSDPKIREAGSATVAAIANASRGAKGPAPPVW--SLVLELQTANARAFKRIRDQVDGAASSTTAQPNKAPPAP------------------------SQGRASAGRGSSSSITLEKSATGSXXXXXGTSSKPPSLRARAAPRGSSKPTPKNRVAPSSSSAGPRKPPASSAK------------GEENDDAEDEAITFTIEEAVEKLESFRIEGWQESILPGLRGTAWKEKVASIERLNQGVMSMSDPGNF--LSPVIVVLGAHTKQFKDSNFNVLKASFLGISSLLEAAHAAGGAKGNRPAVSVVVAPAVEKLGDRKLQETTSSLLTTASESLGPSWVSRRVMKAAGQAKAPLVHSEALVWLHACVKDFGAGVLPAPQVVAFAVSE--LEHVNPKVRSSALELLGSMYHRLGPPMKALVPEL-----RAALQSQVDGIFDKVGYDPAANSQVTRRAPAAGDAEQGDAPVGGGLPRIDLSTLLEKDCLTRMQCIKGKDAWKGRKAAIEEVVQACAKSGNHLEANRFMVEVLKALTPRLADSQSNLKPLTASAIAELACSLATDAGTKLTRIYAEPLLACVADNRKMMRDAAIAALEKVTTAGGSLHVPTAEALMGPVVVAMTNTVGRTELLTWIKTFLAQIPAGEGPTSLVSPLLVCMQDKSAGARQVAQECLSVLVGAGTVQRSRVRAGTRDFPPAVMRQLKPALEKILDASGDPSSGDAETGDTTVTVTSKIAAAPP------------AVVSKLVRGG----------PAAGGSSGPQTKRPSR---STTTAQKMESAPESDAIPLPTGGPLLSTNSKAKRLESEKRSRWFVSSDEPRD--HQTSSLKALWAPLLQADAVDILFPSRVGSMECGT-SGMELLSSALREQRASFMDHLDLIFKWISLRLCEKENVKAMGQLLQFLGDTFGALVEAQYRLEDAEVDALLPTLLEKSGQAKERFRVAIRALLTKIPLLCSYAKYSPLLLQQATASKNSRTRIACLLELSRCISADGPASALGKKGLKELAKHVDSDQAEVRSAALDAVESCYMGLDMDSARIHRLLGAVNDKTKTLIDERMK 4670
AP AA G+ PLEA +L+ KNWK RK +EQ++TLF+Q + + V F K M +D NAS L+ + +L + E+ S + V KG S RPG + +E I + LLEG +++KPKVPPAC+ +++AL+ +G R +PL+ +K+ALP + +V A R +++ EI W G ++ +VS LR Q+T+ + +K+ G PT ++R RP A+ AG K + A AAFDPR+F E VD+L+ LP+TEF KLA KWSE +E L I +D+IG VPKL +GD+ +LV +K L ++V + + + +L LA+GL + F + R + +L KL DKK V +L A LD + ++D ++D++ A D K A AR+ +G+++R V K N+ A + ++ ++D+DP +R+AG + + A+ W S++ E+ N RA K I+ + G AS+ ++P S + ++ + ++ S+ + PSL+ A RG P + + P ++A P+ PA G + D AI+ EEA E + +E W +I G W E+ +IE L + + S + + V + TK+FKDSN NVLK++F + + E A +K R V +VV A +K+GDRK ET ++L E+ PS+ + ++ + + PL H EAL L CVKDFG + +V FA LE +N KVRS A LLG MY +LGP AL+P L + AL + V+ F KVG+D A+ + +R D + A G R+D+S+ + K+ L M+ K AWK R AA++ V C +G +E R + EVL++L RL DS +NLK A+ I +A S+ D G K+++I L++ VADN+K+M+ AAI AL K E+L+ P+ + NTVGR ELL W L + + LV P + CM DKSA AR+ AQ L + V + + G RD PA MR LKP L+K+ DA + G ++ +A PP +V S + RGG PA G + RPS STT A + E +A PL L + +K+ R+ + ++W + + + S ++A W P L + LF S+E G + M+ L + Q + LDLI KW SLR+ + NV+A+ +LL+ L F L Y+L+D E LLP LL++SGQ+K RFRV R ++ + + S KY L++ + SKN ++R C+ + ++ G +G++ +K++ K+V + + E+R +A++ + + Y + + + R G + L+ R+K
Sbjct: 159 APAAAAAGGGDVLPLEAILPKLSDKNWKTRKEGFEQIKTLFEQPGATTAQVRPALEMFTK-MCEDVNASALEAGVAAVLAYTVNVQPFEKEIVSGVMARVTDKGFSSRPGIVKLSEELTDAFIAAGAAEETVLALLEGANNRKPKVPPACLACILEALKAYGPRVVPLQAIKSALPKLFEGQVKA-RPFAMSIMVEIHRWTGPALVQDIVSNLRPAQQTEFEGHIKDVVVGQA-APTKFVRGAKRPGAAGPAGASGKASGGSAAATTPAPAAFDPRDFAETVDLLAMLPRTEFKAKLALPKWSEKVEALKIVLDLIGPVPKLASGDFYELVSTLKPLTTDANVNIVAKSIEVLGALADGLRKNFTQHARLMFLELLRKLSDKKSV-ILNATNKSLDLFLEHSMTIDMMMDDLKMACDASKNKAPPARVQTMGFLTRAVEKRVVDLNDKALIVAFGAMFMKGMEDTDPTVRKAGQESFVVLLKAT-----DQTGAWLQSMMDEIARKNPRASKSIQKSLGGGASAPPSRPGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXASASSFGGSKPAAEGVDVDMSSPAAVGPRR------PSLKKPA--RG---PPARFGMKPGGAAAAPKAAPARKXXXXXXXXXXXXXAGGGSTDFTAMAISVAAEEAEEVIAELPMENWS-AIQAGFASVKWLERKQAIEGLEEFAKTQSSMMSMRVIEAFTVYVAKQTKEFKDSNINVLKSAFQAVGTFAETA----ASKFPRGVVCLVVPRACDKIGDRKASETIHNMLMQFCEATSPSYTTGCLIDYMPKVRTPLAHIEALAVLSECVKDFGISICNPRALVDFAKGPVGLESLNAKVRSGATSLLGVMYSQLGP---ALLPILNLESWKPALAATVEAEFQKVGFDQASAMESVKRHVKDEDEVKAAADPGALFGRVDVSSQITKELLENMKNETDKVAWKMRAAAMDSVQSICEGAGCAIEFTRPVQEVLRSLKARLNDSNANLKVKAANVIGVVATSIGPDVG-KMSKILGASLISGVADNKKVMQAAAIQALHKWVCHSNETSSACMESLLSPLSEGLLNTVGRAELLGWAAEHLKKCEKLD-LHCLVGPTVQCMMDKSAEAREKAQ-LLLIEVMKSVGKDIVLTTGCRDIKPAAMRALKPLLQKVCDAVEASGAAAPSGGQAAPSIPGATSATPPHPPLGASQGSATSVSSGIGRGGIRRRASGSGTPAPGFGVKSRLARPSSFRGSTTPASSLSEIAEKEAAPL-----LKMSTNKSARIAKGQYNKWIFEATSVSEIAGRQSEVEAEWKPFLSPEFHAKLFAP---SLEKGMLAAMDDLMLCVLHQPEEVVASLDLILKWCSLRIVDN-NVQALAKLLEVLVKLFEMLKSTGYQLDDVEAAILLPYLLQESGQSKPRFRVRFRDIMKLVVDVYSAEKYVTYLMECSNGSKNMKSRCECIDLVEYIVTVHG-YQVVGRRCIKDVGKYVVAHEKELRESAINTLVAVYARTEGNPDKFFRFAGVTTQQGIDLLSARLK 1661
BLAST of mRNA_C-linearis_contig107.1031.1 vs. uniprot
Match: A0A225W549_9STRA (Cytoskeleton-associated protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W549_9STRA) HSP 1 Score: 561 bits (1445), Expect = 1.030e-160 Identity = 470/1455 (32.30%), Postives = 723/1455 (49.69%), Query Frame = 3
Query: 372 RLTSKNWKERKAAYEQVQTLFQQAQSDDSDVFRDYAPFLKAMVQDSNASCLDVALDVLLVFA---DGYAKASELYSELAPAVVAKGLSGRPGTITRAEAALLKLIEVDTPDVVAATLLEGLSDKKPKVPPACVGILIKALELFGARAMPLKDLKAALPGMLSHKVVAVRQQGLALAAEIISWCGEPMLASVVSELRAGQKTDLDSLVKEKATGSPRVPTLYLRKDRPSASDEAGEKPKGAE------AEAAFDPREFIEPVDILSKLPKTEFNQKLAATKWSEILEGLNIAVDMIGAVPKLTAGDYGDLVQKVKRLGDHSHVQVASTAHRLLSLLAEGLGQGFHPYFRSILGAMLLKLKDKKCVGVLGAC---LDKLYGNPHSLDQVVDEVVAALDPKK--AIHARLAALGWISRCV-AKSKPANEVATLATLAKATIRLVDDSDPKIREAGSATVAAIANASRGAKGPAPPVW--SLVLELQTANARAFKRIRDQVDGAASST-TAQPNKAPPAPSQGRASAGRGSSSSITLEKSATGSXXXXXGTSSKPPSLRARA---APRGSSKPTPKNRVAPSSSSAGPRKPPAS-------------SAKGEENDDAEDEAITFTIEEAVEKLESFRIEGWQESILPGLRGTAWKEKVASIERLNQGVMSMSDPGNF--LSPVIVVLGAHTKQFKDSNFNVLKASFLGISSLLEAAHAAGGAKGNRPAVSVVVAPAVEKLGDRKLQETTSSLLTTASESLGPSWVSRRVMKAAGQAKAPLVHSEALVWLHACVKDFGAGVLPAPQVVAFAVSE--LEHVNPKVRSSALELLGSMYHRLGPPMKALVPEL-----RAALQSQVDGIFDKVGYDPAANSQVTRRAPAAGDAEQGDAPVGGGLPRIDLSTLLEKDCLTRMQCIKGKDAWKGRKAAIEEVVQACAKSGNHLEANRFMVEVLKALTPRLADSQSNLKPLTASAIAELACSLATDAGTKLTRIYAEPLLACVADNRKMMRDAAIAALEKVTTAGGSLHVPTAEALMGPVVVAMTNTVGRTELLTWIKTFLAQIPAGEGPTSLVSPLLVCMQDKSAGARQVAQECLSVL---VGAGTVQRSRVRAGTRDFPPAVMRQLKPALEKILDASGDPSSGDAETGDTTV--TVTSKIAAAPPAVVSKLVRGGPAAGGSSGPQTKRPSRSTTTAQKMESAPE-SDAIPLPTGGPLLSTNSKAKRLESEKRSRWF--VSSDEPRDHQTSSLKALWAPLLQADAVDILFPSRVGSMECGT-SGMELLSSALREQRASFMDHLDLIFKWISLRLCEKENVKAMGQLLQFLGDTFGALVEAQYRLEDAEVDALLPTLLEKSGQAKERFRVAIRALLTKIPLLCSYAKYSPLLLQQATASKNSRTRIACLLELSRCISADGPASALGKKGLKELAKHVDSDQAEVRSAALDAVESCY 4580
+LT KNWK RK +E++++L +Q+ + V R M +D+NAS ++ + +L + + + K E+ + + V KG S RPG + I + LLEG +++KPKVPPAC ++ AL+ +G R +PL+ +K ALP +L V VR +++ EI W G ++ +VS LR Q+T+ + K+ G PT ++R +P+ + AG K A A AAFDPR+F E VD+L+KLPK++F KLA KWSE +E L I +++IG VPKL GDY +LV +K L + S+V + + + +L LA+GL + F Y R++ +L KL DKK V +L A LD + ++D ++D++ A D K A AR+ +G+++R V ++ N+ A + + ++ +DD+DPK+REAG + + A+ G W +++ + N RAFK I+ + G A+ST T++P A + S S G+ + P + AP G +P+ K R PS P P A SA G + D AI+ T EEA E ++ +E W +I G + W E+ ++IE L + + S+ + + + L K FKDSN NVLK+SF + + E A K R V +V A +K+GDRK E +++ E+ PS+ + +++ + + PL H EAL L CVKDFG + ++ F+ LE NPKVRS+A LL +MY +LGP AL+P L + AL V+ F KVG+DPA +R D A G R+D+S + K+ L M+ K K AWK R+ A+ + C +G +E R + E L+ L RL DS +NLK A+ I +A S+ D G K+++I L+A V DN+K M+ AA+ AL E L+ P+ + NTVGR ELL W L + + + LV P + CM DKS+ AR+ AQ L + VG TV G RD PA MR LKP L+K+ D + A T V TVT S L R A+ P R +R + M S+ SD+ T L +N+K R+ + +RW +S + + L+ W P L A+ LF S+E G + M+ L+ + Q + LDL+ KW +LR+ + NV+A+ +LL+ L F L +A Y L+D E LLP LL++SGQ+K RFRV R ++ + + + KY P L++ SKN ++R C+ + +S G + LG+K +K++ K+V + + E+R +A++A+ + Y
Sbjct: 145 KLTDKNWKLRKEGFEELKSLLEQSGVKTNQV-RPAMELFPKMCEDANASAMEAGIAAVLAYTVNVEPFDK--EIVAGVMTRVTDKGFSARPGIVKLCTELTDAFIAAGAAEETVGVLLEGTNNRKPKVPPACATCILDALKEYGPRVVPLQAIKTALPKLLEG-AVKVRPIAMSIMVEIHRWTGPALVQDIVSSLRQAQQTEFEEQTKDVTPGQA-APTKFVRGAKPAKAAGAGGKASTAASGAVEPAAAAFDPRDFAETVDLLAKLPKSDFKTKLALPKWSEKVEALKIVLELIGPVPKLANGDYYELVSTLKPLTNDSNVNIVAKSIEVLGALADGLRKNFTQYARTMFPDLLRKLSDKKSV-ILNATNKTLDLFLQHAMTIDMMMDDLKIACDASKNKAPPARVQTMGFLTRAVETRNVDLNDKALIVSFGAMFMKGIDDTDPKVREAGQNSFTVLLQANDQTAG-----WLQNMMDSIARKNPRAFKTIQRGLGGGAASTPTSRPGSAQSSXXXXXXXXXXXXXXXXXXAGSVA-SRSSFGGSKASEPDVDIEMDAPAPAGPGRPSLKKRGPPSRLGTKPGTPKAPTRKXXXXGXXXXXSAGGSVSTDFTPMAISVTAEEAEEIIDDLHVENWT-AIQEGFASSKWMERKSAIEGLEEYARAQSNMMSMRVIEAFTIYLSKQVKDFKDSNINVLKSSFQAVGTFAETA----ATKFPRGVVCLVTPRACDKIGDRKANEAIRNMIMQFCEATSPSYTTGCMVEYMPKVRLPLAHIEALSVLSDCVKDFGVSICNPRALIDFSKGPQGLESSNPKVRSAATSLLSTMYSQLGP---ALLPILNLDSWKPALAKTVEEEFQKVGFDPANAMASVKRQVKDQDEAPAAADPGALFGRVDVSAQITKELLEDMKNEKDKLAWKKRQEAMINIQAICEGAGCAIEFTRPVQEALRILKARLNDSNANLKVKAANVIGVVATSVGPDIG-KMSKILGATLIAGVGDNKKTMQTAAVQALHCWVRHNNETSTACMEKLLSPLSEGLLNTVGRAELLGWAAEHLQKCEKID-LSCLVGPTVQCMMDKSSEAREKAQILLVEVMKSVGKDTV----FTTGCRDIKPAAMRALKPMLQKVSDTVEATGNASATTSIPPVAPTVTGPGTTTGTPGRSGLQRRASASASGGTPVKSRLTRPGSLRAPMTSSSAISDSSAKDTAPLLKMSNNKPARILKGQYNRWIFETTSVGEMNSRKGELEVEWKPFLSAEFHAKLFAP---SLEKGMLAAMDELTLCIVHQADEVISSLDLVLKWCTLRIVDN-NVQALAKLLEVLVKLFEMLKDAGYHLDDVEAAILLPYLLQESGQSKPRFRVRFRDVMKLVVDVYNPEKYVPFLMECFNGSKNMKSRCECIDLVEYIVSVHG-YNVLGRKCIKDVGKYVVAHEKELRESAINALIAVY 1568
BLAST of mRNA_C-linearis_contig107.1031.1 vs. uniprot
Match: A0A3M6VTF9_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VTF9_9STRA) HSP 1 Score: 562 bits (1448), Expect = 1.280e-160 Identity = 487/1508 (32.29%), Postives = 744/1508 (49.34%), Query Frame = 3
Query: 372 RLTSKNWKERKAAYEQVQTLFQQAQSDDSDVFRDYAPFLKAMVQDSNASCLDVALDVLLVFADGYAKASELYSELAPAVVA----KGLSGRPGTITRAEAALLKLIEVDTPDVVAATLLEGLSDKKPKVPPACVGILIKALELFGARAMPLKDLKAALPGMLSHKVVAVRQQGLALAAEIISWCGEPMLASVVSELRAGQKTDLDSLVKEKATGSPRVPTLYLRKDRPSASDEAGEK--------PKGAEAEAAFDPREFIEPVDILSKLPKTEFNQKLAATKWSEILEGLNIAVDMIGAVPKLTAGDYGDLVQKVKRLGDHSHVQVASTAHRLLSLLAEGLGQGFHPYFRSILGAMLLKLKDKKCVGVLGAC---LDKLYGNPHSLDQVVDEVVAALDPKK--AIHARLAALGWISRCVA-KSKPANEVATLATLAKATIRLVDDSDPKIREAGSATVAAIANASRGAKGPAPPVW--SLVLELQTANARAFKRIRDQV-DGAASSTTAQPNKAPP--------------APSQGRASAGRGSSSSITLEKSATGSXXXXXGTSSKPPSLRARAAP-RGSSKPTPKNRVAPSSSSAGPRKPPASSA-KGEENDDAEDEAITFTIEEAVEKLESFRIEGWQESILPGLRGTAWKEKVASIERLNQGVMSMSDPGNF--LSPVIVVLGAHTKQFKDSNFNVLKASFLGISSLLEAAHAAGGAKGNRPAVSVVVAPAVEKLGDRKLQETTSSLLTTASESLGPSWVSRRVMKAAGQAKAPLVHSEALVWLHACVKDFGAGVLPAPQVVAFAVSE--LEHVNPKVRSSALELLGSMYHRLGPPMKALVPEL-----RAALQSQVDGIFDKVGYDPA-ANSQVTRRAPAAGDAE---QGDAPVGGGLPRIDLSTLLEKDCLTRMQCIKGKDAWKGRKAAIEEVVQACAKSGNHLEANRFMVEVLKALTPRLADSQSNLKPLTASAIAELACSLATDAGTKLTRIYAEPLLACVADNRKMMRDAAIAALEKVTTAGGSLHVPTAEALMGPVVVAMTNTVGRTELLTWIKTFLAQIPAGEGPTSLVSPLLVCMQDKSAGARQVAQECLSVLVGAGTVQRSRVRAGTRDFPPAVMRQLKPALEKILD---ASGDPSSG-DAETGDTTVTVTSKIAAAPPAVVSKLVRGGPAAGG-------SSGPQTKRPSR---------STTTAQKMESAPESDAIPLPTGGPLLSTNSKAKRLESEKRSRWF--VSSDEPRDHQTSSLKALWAPLLQADAVDILFPSRVGSMECG--TSGMELLSSALREQRASFMDHLDLIFKWISLRLCEKENVKAMGQLLQFLGDTFGALVEAQYRLEDAEVDALLPTLLEKSGQAKERFRVAIRALLTKIPLLCSYAKYSPLLLQQATASKNSRTRIACLLELSRCISADGPASALGKKGLKELAKHVDSDQAEVRSAALDAVESCYMGLDMDSA-RIHRLLGAVNDKTKTLIDERMK 4670
+LT KNWK RK +E ++ LF+Q S V R + +D+NAS ++ V+L + E+ P V+A KG S RPG + E + + LLEG +++KPKVPPAC+ ++ AL+ +G R +PL+ +KAALP ++ V A R + + EI+ W G ++ +V LR Q+T+ + +K+ G PT ++ +P+ D +G P AAFDPREF E VD+L+KLPKTEF KLA KWSE +E L I +++IG +PKL G+Y +LV +K L S+V + + + + LA+GL + F Y R + +L KL DKK V +L A LD + ++D ++D++ A D K A AR+ + +++R V + N+ A + + ++ + D+DPK+REAG + + AS G W +++ ++ N+RAFK I+ + G AS+ +++P + + RAS G+ +S + + S S+ PSL R AP R KPT + A ++ A SSA D AI+ EEA + + +E W ++I G + W E+ +I+ L + + S+ N + + L K FKDSN NVLK+SF + + E A +K R V +V A +K+GD+K E +++ E+ PS+ + +++ + + PL H EAL L CVKDFG V ++ FA LE NPKVRS+A+ L G+MY +LGP AL+P L + AL V F K GYDPA A + V RR +A DA G R+D+S+ L K+ M+ K AWK R A++ V C +G +E R + EVL+ L RL DS +N+K A+ I +A S+ D K++++ L+A VADN+K M+ AAI AL K G E+L+ P+ + NTVGR LL W L + + LV+P + CM DKS+ AR+ AQ L + V + S + G RD PA MR LKP L K+ + ASG S+ +A + A PPA L G GG S+G T SR STT++ + ES A L L + SK R+ + +RW SS + + S ++A W P L + LF S S+E G T+ EL S + Q + LDLI KW +LR+ + NV+A+ +LL+ L L + Y+L+D E LLP LL++SGQ+K RFRV R ++ + + + KY P L++ SKN ++R C+ + +S G +G+K +K++ K+V + + E+R +A++A+ S YM + +A + R G + L+ R+K
Sbjct: 146 KLTDKNWKVRKEGFEDLKLLFEQPNVKTSQV-RAAVDLFPKLCEDANASAMEAGFAVVLAYT---LNVEPFDKEIVPRVMARVTDKGFSARPGIVKICEDLTDAFVATGAAEDTTVALLEGTNNRKPKVPPACLSCILGALKAYGPRVLPLQTIKAALPKLMEGPVKA-RPIAMGIMVEIVRWTGPSLVQDIVGNLRPAQQTEFEGQIKDIIPGQA-APTKFVNGTKPTKVDTSGADERASIGAAPAAEPVSAAFDPREFAETVDLLAKLPKTEFKTKLALPKWSEKVEALKIVLELIGPLPKLANGEYYELVSTLKALTSDSNVNIVAKSIEVFGALADGLRKNFMQYARMMFPELLRKLSDKKSV-ILNATNKTLDLFLQHAMTIDMMMDDLKLACDASKNKAPPARVQTMRFLTRAVENRYVNLNDKALMISFGAMFLQGILDTDPKVREAGQTSFIILLQASNQTSG-----WLKNIMDDIARKNSRAFKAIQLGLGSGEASTPSSRPGSVXXXXXXXXXXXXXXXVSSAVSRASFGKPKASEVEVVDVDRASPAPAG---SRRPSLIKRGAPARFGMKPTTTSGAAGKAAPAKKASAVGSSAGTSVGGTDFTPMAISVAAEEAEDIISELHLENW-DAIQEGFASSKWMERKGAIDGLEEYAKTHSNMMNIRVIEAFTIYLAKQVKNFKDSNINVLKSSFQAVGTFAETA----ASKFPRGVVCLVAPRACDKIGDKKANEAVRNMIMQFCEATSPSYTTGCMIEYMPKVRLPLAHIEALSVLSDCVKDFGVSVCNPRALIEFAKGPQGLESSNPKVRSAAISLHGAMYSQLGP---ALLPILNLDSWKPALAEIVKDEFKKAGYDPANAMASVKRRVKDQDEASISANSDALFG----RVDVSSQLTKELFEGMKNEADKGAWKKRGEAMDTVQTICEGAGGAIEFTRPVQEVLRNLRARLNDSNANMKVKAANVIGVVAASVGPDIA-KMSKVLGASLIAGVADNKKSMQSAAIQALHKWVCHNGKTSSTCMESLLSPLSEGLLNTVGRAGLLGWAVEHLKKCDKLD-LHCLVAPTVQCMMDKSSDAREKAQ-LLLIEVMKSVGKDSVLTTGCRDIKPAAMRALKPLLAKVCELAEASGAISTDKEASSASGPTRTPPHPPATPPAAGHGLTSSGIGRGGIRRRTSTSAGVGTPAKSRLARPGSFKASTTSSSSLSEQTESGAAQL-----LKMSTSKPARISKGQFNRWIFETSSVSEMNARKSEIEAEWKPFLSPEFHAKLFAS---SLEKGMLTAMDELTSVCIVHQADEVIASLDLILKWCTLRIVDN-NVQALAKLLELLVKLLDMLKDTGYQLDDVEAAILLPYLLQESGQSKPRFRVRFRDVMKLVVDVYNPEKYVPFLMECFNGSKNMKSRCECIDLVEFIVSVHG-YQVVGRKCIKDVGKYVVAHEKELRESAINALVSVYMKTERGNADKFFRFAGITTQQGIDLLSARLK 1613
BLAST of mRNA_C-linearis_contig107.1031.1 vs. uniprot
Match: A0A329SJM8_9STRA (Cytoskeleton-associated protein 5 n=13 Tax=Phytophthora TaxID=4783 RepID=A0A329SJM8_9STRA) HSP 1 Score: 562 bits (1448), Expect = 1.510e-160 Identity = 475/1507 (31.52%), Postives = 749/1507 (49.70%), Query Frame = 3
Query: 372 RLTSKNWKERKAAYEQVQTLFQQAQSDDSDVFRDYAPFLKAMVQDSNASCLDVALDVLLVFA---DGYAKASELYSELAPAVVAKGLSGRPGTITRAEAALLKLIEVDTPDVVAATLLEGLSDKKPKVPPACVGILIKALELFGARAMPLKDLKAALPGMLSHKVVAVRQQGLALAAEIISWCGEPMLASVVSELRAGQKTDLDSLVKEKATGSPRVPTLYLRKDRPSASDEAGEKPKGAEAEA-------AFDPREFIEPVDILSKLPKTEFNQKLAATKWSEILEGLNIAVDMIGAVPKLTAGDYGDLVQKVKRLGDHSHVQVASTAHRLLSLLAEGLGQGFHPYFRSILGAMLLKLKDKKCVGVLGAC---LDKLYGNPHSLDQVVDEVVAALDPKK--AIHARLAALGWISRCVA-KSKPANEVATLATLAKATIRLVDDSDPKIREAGSATVAAIANASRGAKGPAPPVW--SLVLELQTANARAFKRIRDQVDGAASSTTAQPNKAPPAPSQGRASAGRGSSSSITLEKSATGSXXXXXGTSSKPPS----LRARAAPRGSSKPTPKNRVAPS-------------SSSAGPRKPPAS------SAKGEENDDAEDEAITFTIEEAVEKLESFRIEGWQESILPGLRGTAWKEKVASIE------RLNQGVMSMSDPGNFLSPVIVVLGAHTKQFKDSNFNVLKASFLGISSLLEAAHAAGGAKGNRPAVSVVVAPAVEKLGDRKLQETTSSLLTTASESLGPSWVSRRVMKAAGQAKAPLVHSEALVWLHACVKDFGAGVLPAPQVVAFAVSE--LEHVNPKVRSSALELLGSMYHRLGPPMKALVPEL-----RAALQSQVDGIFDKVGYDPAANSQVTRRAPAAGDAEQGDAPVGGGLPRIDLSTLLEKDCLTRMQCIKGKDAWKGRKAAIEEVVQACAKSGNHLEANRFMVEVLKALTPRLADSQSNLKPLTASAIAELACSLATDAGTKLTRIYAEPLLACVADNRKMMRDAAIAALEKVTTAGGSLHVPTAEALMGPVVVAMTNTVGRTELLTWIKTFLAQIPAGEGPTSLVSPLLVCMQDKSAGARQVAQECLSVL---VGAGTVQRSRVRAGTRDFPPAVMRQLKPALEKILDASGDPSSGDAETGDTTVTVTSKIAAAPPAVV----SKLVRGG-----PAAGGSSGPQTK--RPS--RSTTTAQKMESAPESDAIPLPTGGPLLSTNSKAKRLESEKRSRWF--VSSDEPRDHQTSSLKALWAPLLQADAVDILFPSRVGSMECGT-SGMELLSSALREQRASFMDHLDLIFKWISLRLCEKENVKAMGQLLQFLGDTFGALVEAQYRLEDAEVDALLPTLLEKSGQAKERFRVAIRALLTKIPLLCSYAKYSPLLLQQATASKNSRTRIACLLELSRCISADGPASALGKKGLKELAKHVDSDQAEVRSAALDAVESCYMGLDMDSA-RIHRLLGAVNDKTKTLIDERMK 4670
+LT KNWK RK +E+++TLF+Q + R K M +D+NAS ++ + +L + + + K E+ S + V KG S RPG + I + LLEG +++KPKVPPAC ++ AL+ +G R +PL+ +K ALP ++ V VR +++ EI W G ++ +V+ LR Q+T+ + K+ A G PT ++R +P+ + AFDPR+F E VD+L+KLPK+EF KLA KWSE +E L I +++IG +PKL GDY +LV +K L + S+V + + + + LA+GL + F Y R + +L KL DKK V +L A LD + ++D ++D++ A D K A AR+ + +++R V + N+ A + ++ +DD+DPK+REAG + A+ G W S++ E+ N RAFK I+ + GAA +T+++P A + AS + S G+ + P + + AP G +P+ K R P+ S +A RKPPA+ SA G + D +++ T EEA + +++ W SI G + W E+ ++E R N +MS+ + + L K FKDSN NVLK++F + + E A +K R V +V A +K+GDRK E +++ E+ P++ + +++ + + PL H EAL L CVKDFG + ++ +A LE NPKVRS+A LL +MY +LGP AL+P L + AL V+ F KVG++PA +R D A G R+D+S+ + K+ L M+ K K AWK R A++ V C +G +E R + EVL+ L RL DS +NLK A+ IA +A S+ D K+++I L+A VADN+K M+ AA+ AL K + E+L+ P+ + NTVGR ELL W L + LV+P + CM DKS+ AR+ AQ L + VG V G RD PA MR LKP L+K+ DA +SG + T ++ + AA P A S + RGG A+ GS+ +++ RP R+ T+ +S + A PL L T +K RL + ++W +S + + ++A W P L + LF S+E G + M+ L+ + Q + LDL+ KW +LR+ + NV+A+ +LL+ L F L + Y+LED E LLP LL++SGQ+K RFRV R ++ + + + KY P L++ SKN ++R C+ + +S G +G+K +K++ K+V + + E+R +A++A+ + Y + + + R G + L++ R+K
Sbjct: 156 KLTDKNWKVRKEGFEELKTLFEQPGVKTNQA-RPVMELFKKMCEDTNASAMEAGIAAVLAYTLNVEPFDK--EIVSGVMARVTDKGFSARPGIVKLCTELTDAFIAAGAAEETVTALLEGTNNRKPKVPPACATSILDALKEYGPRVVPLQAIKTALPKLMEG-AVKVRPIAMSIMVEIHRWTGPALVQDIVANLRQAQQTEFEEQTKDVAPGQA-APTKFVRGAKPAKAXXXXXXXXXXXXXXXXXXXXXAFDPRDFAETVDLLAKLPKSEFKAKLALPKWSEKVEALKIVLELIGPIPKLANGDYYELVSTLKALTNDSNVNIVAKSIEVFGALADGLRKNFTQYARMMFPELLRKLSDKKSV-ILNATNKTLDLFLQHAMTIDMMMDDLKLACDASKNKAPPARVQTMAFLTRAVENRYVDLNDKALIVAFGAMFMKGIDDTDPKVREAGQKCFVVLLQATDQTAG-----WLQSMMDEIGRKNPRAFKTIQKGLGGAALTTSSRPGSAQSSRPGSAASXXXXXXXXXXXXXGSAASRSSFGGSKASEPDVDVDMDSSPAPAGLRRPSLKKRGPPTRLGTKPGTAAGAPSKAAPSRKPPAAGSSTGPSAGGGASTDFTPISVSVTAEEAEYIIAELQLDNWS-SIQEGFASSKWMERKGALEGLEEYARANSSLMSV----RVIEAFTMYLSKQVKDFKDSNINVLKSAFQAVGTFAETA----ASKFPRGVVCLVTPRACDKIGDRKANEAVRTMIMQFCEATSPAYTTGCMIECMPKVRLPLAHIEALSVLSDCVKDFGISICNPRALIDYAKGPQGLEGSNPKVRSAATSLLSTMYSQLGP---ALLPILNLESWKPALAKTVEDEFKKVGFNPAKAMATIKRQVKDQDEAPAAADPGALFGRVDVSSQITKELLEDMKNEKDKVAWKKRAEAMDSVQAICEGAGCAIEFTRPVQEVLRNLKARLNDSNANLKVKAANVIAVVATSVGPDIA-KMSKILGASLIAGVADNKKTMQAAAVQALHKWVSHNNETSSACMESLLSPLSEGLINTVGRAELLGWAAEHLQNCGKLD-LYCLVAPTVQCMMDKSSEAREKAQLVLVEVMKSVGKDVV----FTTGCRDIKPAAMRALKPLLQKVSDAVE--ASGGFTASEATTSIPAPSAAPPVAPSAAGNSGVERGGLKRRASASAGSTPVKSRLARPGSLRAPMTSSASQSETSAQAAPL-----LKMTTNKPARLSKGQFNKWIFETTSTSEMNARKGEIEAEWKPFLSPEFHAKLFAP---SLEKGMLAAMDELTLCIIHQGDEVISSLDLVLKWCTLRIVDN-NVQALAKLLEVLVKLFEMLKDTGYQLEDVEAAILLPYLLQESGQSKPRFRVRFRDVMKVVVDVYNPEKYVPYLMECFNGSKNMKSRCECIDLVEYIVSVHG-YQVIGRKCIKDVGKYVVAHEKELRESAINALVAVYKRTEGGNPDKFFRFAGITTQQGIDLLNARLK 1621
BLAST of mRNA_C-linearis_contig107.1031.1 vs. uniprot
Match: A0A8K1FJ01_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FJ01_PYTOL) HSP 1 Score: 557 bits (1435), Expect = 7.680e-159 Identity = 472/1486 (31.76%), Postives = 711/1486 (47.85%), Query Frame = 3
Query: 363 LEARLTSKNWKERKAAYEQVQTLFQQAQSDDSDVFRDYAPFLKAMVQDSNASCLDVALDVLLVFA---DGYAKASELYSELAPAVVAKGLSGRPGTITRAEAALLKLIEVDTPDVVAATLLEGLSDKKPKVPPACVGILIKALELFGARAMPLKDLKAALPGMLSHKVVAVRQQGLALAAEIISWCGEPMLASVVSELRAGQKTDLDSLVKEKATGSPRVPTLYLRKDRPSASDEAGEKPKGAEAEA------AFDPREFIEPVDILSKLPKTEFNQKLAATKWSEILEGLNIAVDMIGAVPKLTAGDYGDLVQKVKRLGDHSHVQVASTAHRLLSLLAEGLGQGFHPYFRSILGAMLLKLKDKKCV--GVLGACLDKLYGNPHSLDQVVDEVVAALDP--KKAIHARLAALGWISRCVAKSKP-ANEVATLATLAKATIRLVDDSDPKIREAGSATVAAIANASRGAKGPAPPVWSLVLELQTANARAFKRIRDQVDGAASSTTAQPNKAPPAPSQGRASAGRGSSSSITLEKSATGSXXXXXGTSSKPPSLRARAAPRGSSKPTPKNRVAPSSSSAGPRKPPASSAKGEENDDAEDEAITFTIEEAVEKLESFRIEGWQESILPGLRGTAWKEKVASIERLNQGVMSMSDPGNF--LSPVIVVLGAHTKQFKDSNFNVLKASFLGISSLLEAAHAAGGAKGNRPAVSVVVAPAVEKLGDRKLQETTSSLLTTASESLGPSWVSRRVMKAAGQAKAPLVHSEALVWLHACVKDFGAGVLPAPQVVAFAVSE---LEHVNPKVRSSALELLGSMYHRLGPPMKALVPEL-----RAALQSQVDGIFDKVGYDPAANSQVTRRAPAAGDAEQGD--APVGGGLPRIDLSTLLEKDCLTRMQCIKGKDAWKGRKAAIEEVVQACAKSGNHLEANRFMVEVLKALTPRLADSQSNLKPLTASAIAELACSLATDAGTKLTRIYAEPLLACVADNRKMMRDAAIAALEKVTTAGGSLHVPTAEALMGPVVVAMTNTVGRTELLTWIKTFLAQIPAGEGPTSLVSPLLVCMQDKSAGARQVAQECLSVLVGAGTVQRSRVRAGTRDFPPAVMRQLKPALEKILDASGDPSSGDAETGDTTVTVTSKIAAAPPAVVSKLVRGGPAAGGSSGP---------------------QTKRPSRSTTTAQKMESAPESDAIPLPTGGPLLSTNSKAKRLESEKRSRWFVS--SDEPRDHQTSSLKALWAPLLQADAVDILFPSRVGSMECGT-SGMELLSSALREQRASFMDHLDLIFKWISLRLCEKENVKAMGQLLQFLGDTFGALVEAQYRLEDAEVDALLPTLLEKSGQAKERFRVAIRALLTKIPLLCSYAKYSPLLLQQATASKNSRTRIACLLELSRCISADGPASALGKKGLKELAKHVDSDQAEVRSAALDAVESCYMGLDMDSARIHRLLGAVNDKTKTLIDERMK 4670
L +L KNWK RK AYEQV+ L +Q D F M +D+NAS ++ + +L +A + + KA + + + V KG SGRPGT+ E + IE + A L+EG +KKPKVPPAC +++ L+ FG R +P++ +KAALP + V VR L + AEI W G ++ VVS LR Q+T+ ++L K+ G + T ++R +P + + FD REF E V++L KLPK+EF KLA KWS +E L I +D+IG VPKL GDY +LV +K+L + S+V + + + +L L++GL + F+ Y R + ++ KL DKK V + LD + ++D ++DE+ +DP KA AR+ +G++ RCV K ++ + + ++D DP +R+AG + AS A L+ E+ N R+FK I+ V GA+ PS SAG S E S+ P L A+ A S+ K + ++AG RKP D ++ EEA L IE W SI GL + W E+ ++IE L S+ + L + + LG K FKDSN NVL+++F I + AA G K R V V AV+K+GDRK ET +++ ES P++V +M K PL H E L L C+ DFG P+V+ V LE NPKVRS A+ +LG MY +LGP AL+P L + AL S V+ F KVG+DPA + +R D E+G A G R+D+S + K+ L M+C + K AWK R AA++ V C +G +E + ++E++K L RL+DS +NLK A I +A S+ + KL++ LL+ V+DN+K M+ A+I AL K V E+L+ V A+ N VGR +LL W L + +SLV+P + C+ DKS+ AR+ AQ L+ ++ + + S + G RD PA MR LKP +EK +A+ PA P GS+GP Q RP S P S P + G L N K+ RL + ++W S + S + A W P L + LF S+E G + ++ L + Q + LDL+ KW SLR+ + NV+A+ +LL+ L F L Y L+D E +LP LL++SGQ+K RFR+ R ++ + + S Y L++ SKN+++R C+ + + G +A+GKK +KE+ K V + + ++R +A+ A+ + Y+ D + R +R +G + L+ ++K
Sbjct: 189 LVTKLADKNWKVRKEAYEQVKALCEQP-GIRGDAVTPLLEFFHKMCEDANASAMEAGMQAVLAYAQKVEPFNKA--IVTPVMKRVTDKGFSGRPGTVKICEEIVSMFIEAGAAEDTVAALIEGTKNKKPKVPPACASSILEGLKAFGPRVLPVQAIKAALPALCESTVNGVRPVALNILAEIHRWTGPALIQDVVSNLRQAQQTEYETLTKDIVLGQAQA-TKFVRGAKPPPAARSXXXXXXXXXXXXXXXXXGFDAREFAETVNLLDKLPKSEFKSKLAEPKWSMKVEALKIVLDLIGPVPKLANGDYYELVNTLKQLSNDSNVNIVAKSIEVLGALSDGLRKNFNQYARLMYPELMKKLSDKKSVILNAVNNTLDLFLQHSMTIDMMMDEIRLGVDPAKNKAPQARVQVIGFLQRCVEKKMVNLSDRGLVVDFGGMFMNGMEDVDPTVRKAGVDAFVVLVKAS---DQTAEFTRGLMDEISRKNPRSFKTIQQAVGGASXXXXXXXXXXXSRPS----SAGSQRSVKTAPEVVEVDMSDAVSTPSAPPRGLAAKPARGPPSRLAGKTTESAKPAAAGARKPAGXXXXXXXGGDFTPFSMAVDAEEAESILVELNIETWG-SITEGLGSSKWMERKSAIESLEDFATQNSNELSVRVLEALTLYLGKSVKDFKDSNINVLRSAFQAIGTF--AAQTTG--KFPRGIVCYTVPSAVDKIGDRKASETIRNMILQLCESTSPAYVLGCIMNHMSNVKTPLAHIEVLTVLSECITDFGVSSCN-PRVIVDHVKGSYGLESSNPKVRSGAISVLGVMYSQLGP---ALLPILNLESWKPALASTVEAEFKKVGFDPAKAAAGAKRQ--IKDEEEGGKKADAGALFGRVDISAQITKELLADMKCEEDKTAWKKRLAAMDSVQAICEGAGCAIEFTKPVIELMKGLKARLSDSNANLKVKAAQVIGVVASSIGPEVA-KLSKGLGPSLLSGVSDNKKNMQVASIEALHKWVRHNNQTSVSCVESLISSVSEALMNPVGRADLLAWTAEHLKACDRLD-LSSLVAPTIQCLMDKSSEAREKAQLVLAEVIKS-VGKDSVLTNGCRDVKPAQMRTLKPLIEKAAEAAAXXXXXXXXXXXXXXXXXXXQVPESPAPAESAP---PQLPGSAGPSRLSRMNSAXXXXXAPGGIRSQLARPGGSFHGGDVSAPEPASHDEPSASAGWLRMNNGKSSRLAKGQFNKWIFDPISQTEMASRKSEIDAEWRPYLSPEFHAKLFAP---SLEKGMMAALDDLMVVISNQPQEVLAALDLLLKWCSLRIVDN-NVQALAKLLEVLVKLFELLKSVGYHLDDVEAAIILPYLLQESGQSKPRFRLRFRDIMRLVVDVYSTENYVNYLMECFNTSKNTKSRCECIDLVEYIVKTHG-FNAVGKKCIKEIGKLVTAHEKDLRESAVGAMIAVYLKTDGNIERFYRFVGVTTQQGMDLLATKIK 1641
BLAST of mRNA_C-linearis_contig107.1031.1 vs. uniprot
Match: A0A1W0ACM4_9STRA (Cytoskeleton-associated protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0ACM4_9STRA) HSP 1 Score: 540 bits (1392), Expect = 2.380e-158 Identity = 453/1486 (30.48%), Postives = 706/1486 (47.51%), Query Frame = 3
Query: 75 CKRSMDCTCPQCAAAAAEFSVEDLKQFSSSIKYDEEGDGQEGNDKPNATKAPPKXXXXXXXXXXXXXXXITSSDSSPPIPET-----APP------PAAP-----------PAGEDGP--------------LEARLTSKNWKERKAAYEQVQTLFQQAQSDDSDVFRDYAPFLKAMVQDSNASCLDVALDVLLVF---ADGYAKASELYSELAPAVVAKGLSGRPGTITRAEAALLKLIEVDTPDVVAATLLEGLSDKKPKVPPACVGILIKALELFGARAMPLKDLKAALPGMLSHKVVAVRQQGLALAAEIISWCGEPMLASVVSELRAGQKTDLDSLVKEKATGSPRVPTLYLRKDRPSASD-----EAGEKPKGAEAEAAFDPREFIEPVDILSKLPKTEFNQKLAATKWSEILEGLNIAVDMIGAVPKLTAGDYGDLVQKVKRLGDHSHVQVASTAHRLLSLLAEGLGQGFHPYFRSILGAMLLKLKDKKCVGVLGA--CLDKLYGNPHSLDQVVDEVVAALDPK--KAIHARLAALGWISRCVAKSK-PANEVATLATLAKATIRLVDDSDPKIREAGSATVAAIANASRGAKGPAPPVWSLVLE-LQTANARAFKRIRDQVDGAASSTTAQPNKAPPAPSQGRASAGRGSSSSITLEKSATGSXXXXXGTSSKPPSLRARAAPRGSSKPTPKNRVAPSSSSAGPRKPPASSAKGEENDDAEDEAITFTIEEAVEKLESFRIEGWQESILPGLRGTAWKEKVASIERLNQGVMSMSDPGN-FLSPVIVVLGAHTKQFKDSNFNVLKASFLGISSLLEAAHAAGGAKGNRPAVSVVVAPAVEKLGDRKLQETTSSLLTTASESLGPSWVSRRVMKAAGQAKAPLVHSEALVWLHACVKDFGAGVLPAPQVVAFAVSE--LEHVNPKVRSSALELLGSMYHRLGPPMKALV--PELRAALQSQVDGIFDKVGYDPA-ANSQVTRRAPAAGDAEQGDAPVGGGLPRIDLSTLLEKDCLTRMQCIKGKDAWKGRKAAIEEVVQACAKSGNHLEANRFMVEVLKALTPRLADSQSNLKPLTASAIAELACSLATDAGTKLTRIYAEPLLACVADNRKMMRDAAIAALEKVTTAGGSLHVPTAEALMGPVVVAMTNTVGRTELLTWIKTFLAQIPAGEGPTSL-----VSPLLVCMQDKSAGARQVAQECLSVLVGAGTVQRSRVRAGTRDFPPAVMRQLKPALEKILDAS--GDPSSGDAETGDTTVTVTSKIAAAPPAVVSKLVRGGPAAGGSSGPQTKRPSRSTTTAQKMESAPESDAIPLPTGGPLLSTNSKAKRLESEKRSRWFVSSDEPRDHQT--SSLKALWAPLLQADAVDILFPSRV--GSMECGTSGMELLSSALREQRASFMDHLDLIFKWISLRLCEKENVKAMGQLLQFLGDTFGALVEAQYRLEDAEVDALLPTLLEKSGQAKERFRVAIR 4331
C R+M C CP C + K SS+IKY E+G+ + PP XX T +SPP+P T APP AAP PA +D P LEA++ KNWK RK YE ++T F+ Q D + MV DSNA+ ++ L +L + A ++ + + P V+ K +GRPGT+ AE +L+ + + A LLEG +KKPKVPP C+ +++ + FG R +P+ LK+ LP + V VR + L EI W G +LA +V+ LR QKT+ + +K+ G V T Y++ P A+ G A A DPR+F E VD+L+KLPKTEF KLA KWSE + L I ++ +G+VPKL GDYGDLVQ +K ++V + + A +L +LA+GL + F Y R +L +L KL DKK + + LD L + ++ ++DE+ + +P K AR + + R +AK N+ + + TL + +DDSDP +R+ G + + +S A P + L+ L+ R+FK I + A SS ++ + AP P+ +A ++ + + K +G P R A + K TP +KP AS+A + E +T T+ EA ++L ++ W SI+ G + W E+ A+ E L + V+S D N + +++ TK+FK+SN V+K++F ++ + + V+ +V P++EK+GDRK+ +T LL E +GP++V R+ KAPL ++AL ++ C+ DFG + V+ F LE NPK R +A + G+MY +LGP M L+ + AL S V+ F KVGY+PA A S ++R+ D++ + V R+D+S + K+ L MQ + K AWK R AA+E + C ++G +E + + E++KAL RL+DS +NLK I +A S+ ++ +KL++ +++ V+DN+K M+ A + L K GS E+L+ + + N+VGR ELL W+ IP E L + P + C+ DKS+ AR+ AQ L + +V + V AG RD PA MR LKP ++K A+ G P E DT + AAP A+ R + A + P+ + P+ L + K RL+ ++++W + D + L++ W P + +F G ME ++ LS + +Q D I KW +LR+ + NV+A+ ++L FL F LVE ++ L+D E LP L ++SGQ K RFR+ R
Sbjct: 5 CLRNMSCRCPLCMGEDVGELLALTKTISSNIKYGEDGEEE---------VVPPPVKSGFGGNSPXXATRKTFVANSPPVPSTKARAKAPPLQLEPVVAAPAPRTSPLQREEPADDDRPKRAKSDEPPLAFEELEAKVADKNWKIRKEVYEVMKTAFETQQGVDGG---NVTELFGKMVDDSNAAAMEAGLAAVLAYTKEASSKQWSNSVIARTMPKVIDKCFAGRPGTVKLAEELVLEYVHQGGAEDTIAALLEGTKNKKPKVPPLCINSILECFKTFGPRVIPIPPLKSTLPALCESTVNNVRPAAMKLICEIYRWTGPALLADIVNGLRPAQKTEYEESIKDITPGQATV-TRYVKGMEPKAAPTRPGARGGAXXXXXPAAATMDPRDFAETVDLLAKLPKTEFKAKLALPKWSEKVAALTIIIETVGSVPKLANGDYGDLVQTLKLCMQDANVNITAKAIEVLGVLADGLRKNFAQYARVMLSPLLKKLSDKKSLILNNTHHTLDMLLQHSLPIEAMMDEIKISAEPSTNKIPAARAQTILLLQRAIAKKYINVNDASLMKTLGELFASGIDDSDPNLRKTGVEAMVTLVESSENA----PRMVKATLDGLEKRQPRSFKVIEAAIGPAGSSASSDTSSAPSQPASVPKAAPPKTTETKSNPKPGSG------------PPARLSAMKKAPGKATPAG-----------QKPAASAAPVSTS-----ETMTLTVAEAEQQLIEMDLDQWA-SIVAGFQSPKWSERKAAFETLEEAVVSNPDLANTHIEALVMYAYGQTKEFKESNVQVIKSAFQAFATFADTCSTVL----PKSVVTQLVPPSIEKIGDRKISDTIKKLLGFFCEHVGPAFVLERIFAHMPSVKAPLAQADALSFISECISDFGVALCQPRAVIEFGKGPQGLESSNPKCRVAATSVFGTMYSQLGPAMLPLLGLDSWKPALSSSVEAEFKKVGYNPATAMSSISRKLRHVDDSDT-EMSVASAFGRMDISAKITKELLAEMQSEEDKAAWKKRLAAMESAQRLCEEAGLAIELTKTVGELMKALKSRLSDSNANLKVKAVQVIGVVAQSIGSNV-SKLSKGMGANIVSGVSDNKKNMQIACVETLNKWVFHDGSTSTHCLESLLPFISDGLRNSVGRAELLGWL------IPHAESAGKLDLHCLIEPTIDCLMDKSSDAREKAQTLLVHVFR--SVGKDAVFAGCRDMIPAKMRTLKPMIDKACQAAFAGSP----VEENDTKPAQAAPAKAAPAALA-------------------RHNSLPAPASAKVAPPKKEENPI-----ALLPSEKMPRLDRNRKNKWIFEPTDVSDMNARKAQLESEWGPYMTPALRQRVFAVSYEKGMMEA----IDDLSKCIVDQPREVQSSFDFILKWSTLRIVDN-NVQALAKMLDFLVKLFAMLVEHEWELDDIEAGIFLPYLCQESGQQKPRFRLRFR 1397 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig107.1031.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig107.1031.1 >prot_C-linearis_contig107.1031.1 ID=prot_C-linearis_contig107.1031.1|Name=mRNA_C-linearis_contig107.1031.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=2242bp MACKRSMDCTCPQCAAAAAEFSVEDLKQFSSSIKYDEEGDGQEGNDKPNAback to top mRNA from alignment at C-linearis_contig107:185541..204296- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig107.1031.1 ID=mRNA_C-linearis_contig107.1031.1|Name=mRNA_C-linearis_contig107.1031.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=18756bp|location=Sequence derived from alignment at C-linearis_contig107:185541..204296- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig107:185541..204296- >mRNA_C-linearis_contig107.1031.1 ID=mRNA_C-linearis_contig107.1031.1|Name=mRNA_C-linearis_contig107.1031.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=13452bp|location=Sequence derived from alignment at C-linearis_contig107:185541..204296- (Chordaria linearis ClinC8C monoicous)back to top |