prot_C-linearis_contig105.933.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig105.933.1
Unique Nameprot_C-linearis_contig105.933.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length158
Homology
BLAST of mRNA_C-linearis_contig105.933.1 vs. uniprot
Match: A0A6H5K3H5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3H5_9PHAE)

HSP 1 Score: 185 bits (469), Expect = 5.340e-57
Identity = 92/155 (59.35%), Postives = 114/155 (73.55%), Query Frame = 0
Query:    1 MAGGVLDWCGGINDAVCAVLTESSFGVATNDFDGRVVADSHMDATTNAFAEAFGEGVRRPEWVVTSPPYKHAFPILKHALRIGRVGVAFKLRLTFLEPTKSRGQWLKDNPPHSIVMLSRATYRGRKCSSTEAWFLWR--SGGVDREESKRPAFFF 153
            +AGGVLD CG  +DA+  VL   S  V+TNDF+ R+ AD+H+DAT+  F   F    +RP+W+VTSPPY +AF IL  AL + RVGVAFKLRL+FLEPTK+RG+WLKDNPP ++V+L RATY GR CSSTEAWF+W   S GV+R      AFFF
Sbjct:   24 LAGGVLDACGSASDAIKVVLEAHSLNVSTNDFNPRLTADTHLDATSEEFTAMFSTEGQRPDWIVTSPPYGNAFSILVRALGVVRVGVAFKLRLSFLEPTKTRGKWLKDNPPSAVVVLPRATYCGRVCSSTEAWFIWHLASDGVERPGQ---AFFF 175          
BLAST of mRNA_C-linearis_contig105.933.1 vs. uniprot
Match: D8LSI1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSI1_ECTSI)

HSP 1 Score: 100 bits (249), Expect = 4.370e-24
Identity = 56/131 (42.75%), Postives = 72/131 (54.96%), Query Frame = 0
Query:    9 CGGINDAVCAVLTESSFGVATNDFDGRVVADSHMDATTNAFAEAF--GEGVRRPEWVVTSPPYKHAFPILKHALRIGRVGVAFKLRLTFLEPTKSRGQWLKDNPPHSIVMLSRATY-RGRKCSSTEAWFLW 136
            CGG  DAV   L  S+  + TND      AD++++A+   F E F      +RPEWVVTSPPY  A   +K A+ +   GVAFK+ + FLEP   RG WL+ NPP   V L RA Y R     + E W +W
Sbjct:    2 CGGPTDAVATRL-RSTCEILTNDVSSGRPADTNLNASLELFPEDFLAAYSGKRPEWVVTSPPYSRALTFVKAAMSLATKGVAFKMPIFFLEPCADRGGWLQTNPPSVCVFLRRAKYTRANNAKTGEFWGVW 131          
BLAST of mRNA_C-linearis_contig105.933.1 vs. uniprot
Match: A0A6H5K6T5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6T5_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 4.390e-23
Identity = 42/56 (75.00%), Postives = 47/56 (83.93%), Query Frame = 0
Query:   85 VGVAFKLRLTFLEPTKSRGQWLKDNPPHSIVMLSRATYRGRKCSSTEAWFLWRSGG 140
            +GVAFKLRLTFL P KSRG+WLKDNPP  IVML RATYR R+CSSTE WF+W + G
Sbjct:    1 MGVAFKLRLTFLGPAKSRGRWLKDNPPDRIVMLPRATYRRRRCSSTETWFVWETRG 56          
BLAST of mRNA_C-linearis_contig105.933.1 vs. uniprot
Match: D7FJU4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJU4_ECTSI)

HSP 1 Score: 88.6 bits (218), Expect = 1.010e-18
Identity = 53/124 (42.74%), Postives = 71/124 (57.26%), Query Frame = 0
Query:    1 MAGGVLDWCGGINDAVCAVLTESSFGVATNDFD-----GRVVADSHMDATTNAFAEAF--GEGVRRPEWVVTSPPYKHAFPILKHALRIGRVGVAFKLRLTFLEPTKSRGQWLKDNPPHSIVML 117
            + G VLD CGG  DA+   L  ++  V TND       G +  D+++DA+  +FA  F   +  +RP+WV+TSPPYK A   +K AL +   GVA KL L+FLEP   RG WL+ NPP   V  
Sbjct:   99 LEGCVLDMCGGPGDAIATRLG-ATCKVVTNDISTRLSPGGLPPDTNLDASLASFAVDFLLAKPGQRPDWVLTSPPYKGALEYVKSALSLAAKGVALKLPLSFLEPCADRGGWLQANPPAVCVFF 221          
BLAST of mRNA_C-linearis_contig105.933.1 vs. uniprot
Match: A0A252D8B1_9NOSO (Uncharacterized protein n=1 Tax=Nostoc sp. RF31YmG TaxID=1932668 RepID=A0A252D8B1_9NOSO)

HSP 1 Score: 85.9 bits (211), Expect = 4.270e-18
Identity = 55/143 (38.46%), Postives = 82/143 (57.34%), Query Frame = 0
Query:    1 MAGGVLDWCGGINDAVCAVLTESSFGVATNDFDGRVVADSHMD-ATTNAFAEAFGEGVRRP-EWVVTSPPYKHAFPILKHALRIGRVGVAFKLRLTFLEPTKSRGQWLKDNPPHSIVMLSRATYRG--RKCSSTEAWFLWRSG 139
            + G +L+ C G + A+   L E    V T D     +AD+  D ATT+ + +      ++P +WVVT+PP+  A  IL  A     VGVAF LRL++LEP K RGQWL ++PP  +++L R ++ G  +  S T AW +W+ G
Sbjct:   35 ITGTLLEPCNG-SGAISNRLKEDGLSVITTD-----IADNPQDDATTHQYWQR-----QKPYDWVVTNPPFDSASKILPKAYEYASVGVAFLLRLSYLEPCKDRGQWLAEHPP-KLIVLPRISFTGDGKVDSCTCAWMIWKKG 165          
BLAST of mRNA_C-linearis_contig105.933.1 vs. uniprot
Match: A0A6H5KU02_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU02_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 5.320e-18
Identity = 46/117 (39.32%), Postives = 62/117 (52.99%), Query Frame = 0
Query:   38 ADSHMDATTNAFAEAF--GEGVRRPEWVVTSPPYKHAFPILKHALRIGRVGVAFKLRLTFLEPTKSRGQWLKDNPPHSIVMLSRATY-RGRKCSSTEAWFLWRSGGVDREESKRPAF 151
            AD+++DA+  +F E F      +RPEWVVTSPPY  A   +K A+ +   GV FK+ ++ LEP   RG WL+ NPP   + L RA Y R       E W +W +  V      R  F
Sbjct:  137 ADTNLDASLESFPEDFLAAYSGKRPEWVVTSPPYSRALTFVKAAMSLATKGVEFKMPISCLEPCADRGGWLQTNPPSVCLFLRRAKYTRANNAKMGEFWGVWYTQEVSCRNKTRLVF 253          
BLAST of mRNA_C-linearis_contig105.933.1 vs. uniprot
Match: A0A433N1N0_CHLFR (Uncharacterized protein n=1 Tax=Chlorogloeopsis fritschii PCC 6912 TaxID=211165 RepID=A0A433N1N0_CHLFR)

HSP 1 Score: 71.6 bits (174), Expect = 2.240e-12
Identity = 51/140 (36.43%), Postives = 72/140 (51.43%), Query Frame = 0
Query:    5 VLDWCGGINDAVCAVLTESSFGVATNDFDGRV-VADSHMDATTNAFAEAFGEGVRRPEWVVTSPPYKHAFPILKHALRIGRVGVAFKLRLTFLEPTKSRGQWL---KDNPPHSIVM-LSRATYRG--RKCSSTEAWFLWR 137
            +L+ C G  D +  VL   + GV  +D   +     +  DAT   F   +   +R  EWV+T+PP+  A  IL  A +   VGV F LRL++LEPTK+RG W     DN  + I+    R ++ G  R  S T AW +WR
Sbjct:   40 ILEPCAGEGD-ILNVLQYYNVGVVASDISWQPHPGQTTTDATERLFWHYWKNRLRF-EWVITNPPFNEASAILPLAYKHASVGVCFLLRLSYLEPTKARGDWFLEHMDNMSNLIIFGQPRPSFTGDRRVDSVTTAWMVWR 177          
BLAST of mRNA_C-linearis_contig105.933.1 vs. uniprot
Match: A0A1V5ZCZ4_9BACT (Uncharacterized protein n=1 Tax=Candidatus Hydrogenedentes bacterium ADurb.Bin179 TaxID=1852849 RepID=A0A1V5ZCZ4_9BACT)

HSP 1 Score: 67.8 bits (164), Expect = 5.890e-11
Identity = 52/154 (33.77%), Postives = 73/154 (47.40%), Query Frame = 0
Query:   16 VCAVLTESSFGVATNDFDGRVVADSHMDATTNAFAEAFG--EGVRRPEWVVTSPPYKHAFPILKHALRIGRVGVAFKLRLTFLEPTKSRGQWLK---DNPPHSIVMLSRATYR--------GRKCSS---TEAWFLWRSGGVDREESKRPAFFF 153
            +   L  +   + TND D     D   DAT + FA  +G   G+   +WVVT+PP+  A  IL +A+   RVGVAF LRL+++EP  +R  WL    D   +   +  R  +R        G+K  +   T AWF+WR          RP F F
Sbjct:   41 IARALAGNGRTIFTNDIDPNHGCDFASDAT-DPFAFCWGLYGGI---DWVVTNPPFSLAEDILANAMSYARVGVAFLLRLSYMEPVTTRAAWLNGYADKMIYQGALNPRPHFRKGEINPKTGKKYGTDNVTVAWFVWRRDWSWARLGIRPPFDF 190          
BLAST of mRNA_C-linearis_contig105.933.1 vs. uniprot
Match: A0A6H5K2D0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2D0_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 2.170e-9
Identity = 45/127 (35.43%), Postives = 59/127 (46.46%), Query Frame = 0
Query:    9 CGGINDAVCAVLTESSFGVATNDFDGRVVADSHMDATTNAFAEAF--GEGVRRPEWVVTSPPYKHAFPILKHALRIGRVGVAFKLRLTFLEPTKSRGQWLKDNPPHSIVMLSRATYRGRKCSSTEAW 133
            CGG  DAV   L  S+  + T D      AD+++DA+  +F E F      +RPEWVVTSPPY  A   +K A+R    G+       F   T  R  WL  N P   V +S  T R  +  +   W
Sbjct:    2 CGGPTDAVATRL-RSACEIRTKDVSSGRPADTNLDASLESFPEDFLAAYSGKRPEWVVTSPPYSRALTFVKAAMR----GIQ---NAHFFTATLRRPGWLTANEPPVCVFVS--TQRKTRMRTMRRW 118          
BLAST of mRNA_C-linearis_contig105.933.1 vs. uniprot
Match: A0A2W4YX34_9CYAN (Uncharacterized protein n=1 Tax=Phormidesmis priestleyi TaxID=268141 RepID=A0A2W4YX34_9CYAN)

HSP 1 Score: 62.8 bits (151), Expect = 4.680e-9
Identity = 42/120 (35.00%), Postives = 57/120 (47.50%), Query Frame = 0
Query:   43 DATTNAFAEAFGE---GVRRPEWVVTSPPYKHAFPILKHALRIGRVGVAFKLRLTFLEPTKSRGQWLKDNPPHS---IVMLSRATYRG---RKCSSTEAWFLWRSGGVDREESKRPAFFF 153
            DAT   F E++     G    +W VT+PP+  A  IL  A    R G AF LRL++LEPT  R  WL +   H    I +  R  +R    +  S T AW +W  G   +E+  +  F F
Sbjct:   87 DATEQRFWESWATLEAGGSPIDWTVTNPPFCEAEQILPLAWEYSRQGCAFLLRLSYLEPTAGRADWLNEMADHLRYLITLNPRPKFRRDTKKTDSVTAAWLVWEKGWSWQEKGIQLPFSF 206          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig105.933.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A6H5K3H5_9PHAE5.340e-5759.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSI1_ECTSI4.370e-2442.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K6T5_9PHAE4.390e-2375.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJU4_ECTSI1.010e-1842.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A252D8B1_9NOSO4.270e-1838.46Uncharacterized protein n=1 Tax=Nostoc sp. RF31YmG... [more]
A0A6H5KU02_9PHAE5.320e-1839.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A433N1N0_CHLFR2.240e-1236.43Uncharacterized protein n=1 Tax=Chlorogloeopsis fr... [more]
A0A1V5ZCZ4_9BACT5.890e-1133.77Uncharacterized protein n=1 Tax=Candidatus Hydroge... [more]
A0A6H5K2D0_9PHAE2.170e-935.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2W4YX34_9CYAN4.680e-935.00Uncharacterized protein n=1 Tax=Phormidesmis pries... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig105contigC-linearis_contig105:77763..78504 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig105.933.1mRNA_C-linearis_contig105.933.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig105 77478..79842 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig105.933.1 ID=prot_C-linearis_contig105.933.1|Name=mRNA_C-linearis_contig105.933.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=158bp
MAGGVLDWCGGINDAVCAVLTESSFGVATNDFDGRVVADSHMDATTNAFA
EAFGEGVRRPEWVVTSPPYKHAFPILKHALRIGRVGVAFKLRLTFLEPTK
SRGQWLKDNPPHSIVMLSRATYRGRKCSSTEAWFLWRSGGVDREESKRPA
FFFSLPV*
back to top