mRNA_C-linearis_contig104.920.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig104.920.1
Unique NamemRNA_C-linearis_contig104.920.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig104.920.1 vs. uniprot
Match: D8LE98_ECTSI (RNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE98_ECTSI)

HSP 1 Score: 1262 bits (3265), Expect = 0.000e+0
Identity = 703/841 (83.59%), Postives = 748/841 (88.94%), Query Frame = 1
Query:  316 MTSQRSTTLAVLGLLAGFVNVDAFRLIPASPGAVSSSLARAQQQSAVASRGASTRRTWRSAHGLTMSSP--AVGNDLPATEELED-KPSRDSVMDELDAILGDVKMDSTAKPASSA-KNTAAVLGQDLDSLLGAPGAPPSAAATPATKQNSDVGDLNLDDLLGPGANSAPPQRYSGGGTAXXXXXXXAPPASRAQPA--------QGWGSPTDGQAPPPQQRMSYSGEFGAASGRYGDMATAAASKVLKGDQLVSLVEVGDEGACPVEEKDVDPKTVAALKARGIENFTPVQAITYDHVLTGRDIIGKSRTGTGKTIAFGLPVIQHLGRFAEDHKERTYQRGRSPRFLVVCPTRELARQVYTELDTLGRGFGLKADVFHGGSAYGPQMKSLSDGLDILVATPGRVMDHLQKGALSLADVRHAVLDEADEMLNMGFADDIETIFSYVNVQECQVLLFSATVPSWVRNIANKYTANPLTVDAVGKNVNKLATTVKHLSIEVSARHRSSMLEDIITYYGKGSHAIVFTNSKAECDDLSDGQTFKTLTSQVLHGDISQHQRDQTIKAFRAKGFQVLVATDVAARGIDVSDIDLVVQYRPPRDPDSYVHRSGRTGRAGRPGVAVTLYAENEIRDIRKIEQGVGQGFRFERGAVPSAEQVMSLAGTVAREQIKGVSDEMLEFFRESAKELLEEEESGDKELLLAKCLAAIARKTHVTRRSMLTGEPDKVTVQMVAPRQLTSGDVMFAVGKLGRAAGFEPMVGKIAVAKDPTTAVFDMATDAADQLIKFSKEQNLESIEFSMCPVLPLLQEVPGGGRFGGGXXXXXXXXXXXXXXXXXXXXXXRSSYG 2802
            MTS+ ST LAVLGLLAGFVNVDAF LIPA+PGAVSSS+ RA+  +AVAS     R TWR+ HGL+MSS   AV N   AT E++D KP R SVMDELDAILGDV+ DS  KPAS      AA L QDLDSLLG+  + P A AT A  +NS + DL+LDDLLGPGANSAPPQRYSGGGTA        P A R  P         Q WG+P  GQ    QQRMSYSGEFGAASG+YGD A   ASK LKGDQ+VSLVEVG+EGACPVEEKDVDPKTVAALKARGIE FTPVQAITYDH+L+GRDIIGKSRTGTGKTIAFGLPVIQHLGRFAEDH++RTYQRGRSPRFLVVCPTRELARQVY EL+TLG  FGLKADVFHGG+AYGPQM+SLSDGLDILVATPGR+MDHLQ+GAL L+DVRHAVLDEADEMLNMGFADDIETIFSYV+V+ECQVLLFSATVPSWVRNIANKYTANPLTVDAVGK+VNKLATTVKHLSIEVS+RHRSSMLEDIITYYGKGSHAIVFTNSKAECD+L+DGQTFKTLTSQVLHGDISQHQRDQTIKAFRAKGFQVLVATDVAARGIDVSDIDLVVQYRPPRDPDSYVHRSGRTGRAGRPGVAVTLYAENEIRDIRKIEQGVGQGFRFERGAVPSAEQVMSLAGTVAREQIKGVSD+M++FFRESA+ELL EEES DKELLLAKCLAAIARKTHVTRRSMLTGEPDKVTVQMVAPRQLTSGDVMFAVGKLGRAAGFEPMVG+IA+AKDPTTAVFDM+T+AADQL+KFSKEQNLESIEF MCPVLP+LQE PGG RFGGG XXXXXXXXXXXXXXXXX    RSSYG
Sbjct:    1 MTSRSSTALAVLGLLAGFVNVDAFSLIPAAPGAVSSSVTRAK--TAVASLEPPARNTWRARHGLSMSSTSSAVENAGAATGEVDDSKPPRASVMDELDAILGDVQQDSGTKPASGGGMGAAAPLDQDLDSLLGSATSAPPATATVAAPKNSGLDDLDLDDLLGPGANSAPPQRYSGGGTAEGGGSF--PAAGRGPPVGGASSDGQQAWGAP--GQQ---QQRMSYSGEFGAASGKYGDTAARTASKELKGDQMVSLVEVGEEGACPVEEKDVDPKTVAALKARGIEKFTPVQAITYDHILSGRDIIGKSRTGTGKTIAFGLPVIQHLGRFAEDHQQRTYQRGRSPRFLVVCPTRELARQVYGELETLGSTFGLKADVFHGGAAYGPQMRSLSDGLDILVATPGRIMDHLQRGALDLSDVRHAVLDEADEMLNMGFADDIETIFSYVDVKECQVLLFSATVPSWVRNIANKYTANPLTVDAVGKHVNKLATTVKHLSIEVSSRHRSSMLEDIITYYGKGSHAIVFTNSKAECDELADGQTFKTLTSQVLHGDISQHQRDQTIKAFRAKGFQVLVATDVAARGIDVSDIDLVVQYRPPRDPDSYVHRSGRTGRAGRPGVAVTLYAENEIRDIRKIEQGVGQGFRFERGAVPSAEQVMSLAGTVAREQIKGVSDDMVDFFRESAQELLAEEESEDKELLLAKCLAAIARKTHVTRRSMLTGEPDKVTVQMVAPRQLTSGDVMFAVGKLGRAAGFEPMVGRIAIAKDPTTAVFDMSTEAADQLVKFSKEQNLESIEFKMCPVLPVLQEAPGG-RFGGGRXXXXXXXXXXXXXXXXXYRGNRSSYG 831          
BLAST of mRNA_C-linearis_contig104.920.1 vs. uniprot
Match: A0A836CKS6_9STRA (RNA helicase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKS6_9STRA)

HSP 1 Score: 618 bits (1593), Expect = 1.520e-200
Identity = 325/549 (59.20%), Postives = 409/549 (74.50%), Query Frame = 1
Query: 1090 DVDPKTVAALKARGIENFTPVQAITYDHVLTGRDIIGKSRTGTGKTIAFGLPVIQHLGRFAEDHKERTYQRGRSPRFLVVCPTRELARQVYT----ELDTLGRGFGLKADVFHGGSAYGPQMKSLSDGLDILVATPGRVMDHLQKGALSLADVRHAVLDEADEMLNMGFADDIETIFSYVNVQECQVLLFSATVPSWVRNIANKYTANPLTVDAVGKNVNKLATTVKHLSIEVSARHRSSMLEDIITYYGKGSHAIVFTNSKAECDDLSDGQTFKTLTSQVLHGDISQHQRDQTIKAFRAKGFQVLVATDVAARGIDVSDIDLVVQYRPPRDPDSYVHRSGRTGRAGRPGVAVTLYAENEIRDIRKIEQGVGQGFRFERGAVPSAEQVMSLAGTVAREQIKGVSDEMLEFFRESAKELLEEEESG----DKELLLAKCLAAIARKTHVTRRSMLTGEPDKVTVQMVAPRQLTSGDVMFAVGKLGRAAGF-EPMVGKIAVAKDPTTAVFDMATDAADQLIKFSKEQNLESIEFSMCPVLPLLQEVPGGGR 2709
            +V   T+  L  +GI +FTPVQA+TY+H+L GRD+I KSRTGTGKTIAFGLPVIQHL RFA+D   R+ +R  +P    +  T  LA   Y+    EL  L +  G+  + F+GG++YGPQ  +L  G+D++V TPGR++DH+QKG L L++++HAVLDEADEMLNMGFAD IE +F+ VN+ ECQVLLFSATVP WVR I+  Y  NPL VDAVG   N+LATTVKHL+IE  +R+R+ MLED+I  YGKGS AIVFT +K ECD+L+ G  FKTL+SQVLHGDI Q+QR+ TI  FR   FQVLVATDVAARGID+S+IDLVVQYRPP DPD+YVHRSGRTGRAGR G  VTL+A+NE RD++KIE+ +G+GF+FER AVPSA QVM +AG VA + +  VS +++ FF  +A+ELL E ++     D E LLA+CLAAIARKT + +RS+LTGEPD  TVQMVA + +T+GDV FAV KL RA G   P +GKIA+ KD  TAVFDM   AA  LI  + +Q L++I+F++C  LP L     GGR
Sbjct:   57 EVIQSTIDVLLGKGITHFTPVQAVTYEHILAGRDMIAKSRTGTGKTIAFGLPVIQHLARFADDADSRSSKRYAAP----LMRTYHLATNTYSKVADELAQLAQPHGMSVECFYGGASYGPQESALRRGVDVVVGTPGRLIDHVQKGNLDLSELKHAVLDEADEMLNMGFADAIEELFARVNIPECQVLLFSATVPDWVRRISAAYLKNPLQVDAVGTTDNRLATTVKHLAIETPSRNRAHMLEDVIAVYGKGSRAIVFTQTKRECDELAAGNAFKTLSSQVLHGDIGQNQREVTIGQFRKGQFQVLVATDVAARGIDISEIDLVVQYRPPTDPDTYVHRSGRTGRAGRLGTCVTLFADNERRDVQKIEKAIGKGFKFERAAVPSATQVMEVAGKVALKALDTVSADVVPFFTPAARELLAESQADGAELDTEQLLARCLAAIARKTEIQQRSILTGEPDMATVQMVAHQPMTTGDVTFAVNKLARAGGGPSPNIGKIAIGKDAHTAVFDMTQAAAAALIDVANDQELKAIKFTLCTELPELSTQEYGGR 601          
BLAST of mRNA_C-linearis_contig104.920.1 vs. uniprot
Match: A0A835ZP19_9STRA (RNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZP19_9STRA)

HSP 1 Score: 531 bits (1367), Expect = 1.120e-165
Identity = 286/486 (58.85%), Postives = 344/486 (70.78%), Query Frame = 1
Query: 1075 PVEEKDVDPKTVAALKARGIENFTPVQAITYDHVLTGRDIIGKSRTGTGKTIAFGLPVIQHLGRFAEDHKERTYQRGRSPRFLVVCPTRELARQVYTELDTLGRGFGLKADVFHGGSAYGPQMKSLSDGLDILVATPGRVMDHLQKGALSLADVRHAVLDEADEMLNMGFADDIETIFSYVNVQECQVLLFSATVPSWVRNIANKYTANPLTVDAVGKNVNKLATTVKHLSIEVSARHRSSMLEDIITYYGKGSHAIVFTNSKAECDDLSDGQTFKTLTSQVLHGDISQHQRDQTIKAFRAKGFQVLVATDVAARGIDVSDIDLVVQYRPPRDPDSYVHRSGRTGRAGRPGVAVTLYAENEIRDIRKIEQGVGQGFRFERGAVPSAEQVMSLAGTVAREQIKGVSDEMLEFFRESAKELLEEE---ESG-DKELLLAKCLAAIARKTHVTRRSMLTGEPDKVTVQMVAPRQLTSGDVMFAVGKLGR 2520
            PV+ KDVD KTV  L+++GIE FTPVQ++TY+H+L GRDI+ +SRTGTGKTIAFGLPVIQHLGRFA+D   RT  RGR PRFLVVCPTRELA+QV  EL  L R   L+ + F+GGS+YGPQ  +L  GLDI+V TPGR++DH+ KG L L++++HAVLDEADEMLNMGFADDIE IFS V++  CQVLLFSATVP WV+ I+  Y  NPL+  A+ K                                         T+++  C          T   QVLHGDI Q+QR+ TI  FR   FQVLVATDVAARGID+S+IDLVVQYRPP DPD+YVHRSGRTGRAGR GV VTLYA+NE RD++KIE+ VG+GF+FER  VPS  QVM +AGTVA + +  VS+E++ FF  +AKEL+ E    E G D E LLA+CLAAIARKT + +RSMLTGEPD  TVQ+ A R LT+GDVMFAV KL R
Sbjct:  148 PVDSKDVDDKTVEILRSKGIEFFTPVQSVTYEHILGGRDIVARSRTGTGKTIAFGLPVIQHLGRFADDADTRTNTRGRRPRFLVVCPTRELAKQVADELSQLARPHNLQVECFYGGSSYGPQESALRRGLDIVVGTPGRLIDHINKGNLDLSELKHAVLDEADEMLNMGFADDIEEIFSKVDIPACQVLLFSATVPDWVKRISAAYLKNPLSFIALLK-----------------------------------------THNRPSC----------TYAVQVLHGDIGQNQREVTIGQFRKSQFQVLVATDVAARGIDISEIDLVVQYRPPTDPDTYVHRSGRTGRAGRSGVCVTLYADNERRDMQKIERAVGKGFKFERAPVPSPAQVMEVAGTVALKSLTAVSEEVVPFFSSAAKELIAESTASEGGLDTEKLLARCLAAIARKTELQQRSMLTGEPDMATVQLTAHRPLTAGDVMFAVDKLAR 582          
BLAST of mRNA_C-linearis_contig104.920.1 vs. uniprot
Match: A0A7S2V2B9_9STRA (RNA helicase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2B9_9STRA)

HSP 1 Score: 494 bits (1271), Expect = 6.700e-152
Identity = 263/540 (48.70%), Postives = 366/540 (67.78%), Query Frame = 1
Query: 1090 DVDPKTVAALKARGIENFTPVQAITYDHVLTGRDIIGKSRTGTGKTIAFGLPVIQHLGRFAEDHKERTYQRGRSPRFLVVCPTRELARQVYTELDTLGRGFGLKADVFHGGSAYGPQMKSLSDGLDILVATPGRVMDHLQKGALSLADVRHAVLDEADEMLNMGFADDIETIFSYVNVQECQVLLFSATVPSWVRNIANKYTANPLTVDAVGKNVNKLATTVKHLSIEVSARHRSSMLEDIITYYGKGSHAIVFTNSKAECDDLSDGQTFKTLTSQVLHGDISQHQRDQTIKAFRAKGFQVLVATDVAARGIDVSDIDLVVQYRPPRDPDSYVHRSGRTGRAGRPGVAVTLYAENEIRDIRKIEQGVGQGFRFERGAVPSAEQVMSLAGTVAREQIKGVSDEMLEFFRESAKELLEEEESGDKEL------LLAKCLAAIARKTHVTRRSMLTGEPDKVTVQMVAPRQ-LTSGDVMFAVGKLG-RAAGFEPMVGKIAVAKDPTTAVFDMATDAADQLIKFSKEQNLESIEFSMCPVLPLL 2685
            +VD +    L A+GI +FT +Q  +   +L G+DIIG+SRTGTGKT+AF LP++Q L    ++    T QRGR PR L++CPTRELA+QV  E++ +   F L+   F+GGSAYGPQ  +L  GLDI+V TPGRVMD + +G L L +++HAVLDEADEMLNMGFA+D+ETIF   +    QVL+FSAT P WV+ I+++YT  P+++DAVG +  +LATTV H+SIEV    ++ +LED+I  +GKGS AIVF  +KAECD L+    FK++++Q LHGD+SQ  RD  IK F+   FQVLVATDVAARG+D+S +DLVVQ  PP D D++VHRSGRTGRAG+ G AV LY+  E   I+++E+ +G  FRFE+ + P+ +QVM  A  VA   +  V+ +++ +F + A+++ EE     +E+      LL+KCLAAI+ K  +  RS+LTG+PD +TV M   RQ L + D  F V KL  R + F  ++GKI  ++D  + VFDM  +AAD L++ +        +FS+C  LP L
Sbjct:  199 EVDDRIKKTLAAKGITHFTLIQEQSLKPILEGKDIIGRSRTGTGKTVAFTLPLLQKL----DEDPSATRQRGRDPRVLILCPTRELAKQVEAEINDMSTPFRLQTHCFYGGSAYGPQANALRGGLDIVVGTPGRVMDLINRGDLRLQNIQHAVLDEADEMLNMGFAEDVETIFGNFDTDSAQVLMFSATTPDWVKEISSRYTDKPVSIDAVGNSQTRLATTVNHVSIEVDRDLKAGILEDLIAVHGKGSRAIVFAQTKAECDHLTTS-AFKSVSAQPLHGDMSQKLRDTCIKQFKNHKFQVLVATDVAARGLDISGVDLVVQLNPPFDTDTFVHRSGRTGRAGQKGTAVMLYSAQEFGGIKRLERELG--FRFEKSSPPTTQQVMQAASNVAEHSLSEVNPKVVAYFEDKAQQMAEEVMPEGQEVPAELTNLLSKCLAAISGKKDIQERSILTGKPDMMTVMMKTERQQLEARDAFFVVNKLSNRGSDFSNLLGKIETSQDGMSLVFDMDIEAADSLVETATISPFRDFQFSICEKLPPL 731          
BLAST of mRNA_C-linearis_contig104.920.1 vs. uniprot
Match: A0A7S2DBW6_9STRA (RNA helicase (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DBW6_9STRA)

HSP 1 Score: 484 bits (1246), Expect = 8.100e-149
Identity = 269/578 (46.54%), Postives = 372/578 (64.36%), Query Frame = 1
Query: 1060 DEGACPVEE-KDVDPKTVAALKARGIENFTPVQAITYDHVLTGRDIIGKSRTGTGKTIAFGLPVIQHLGRFAEDHKERTYQRGRSPRFLVVCPTRELARQVYTELDTLGRGFGLKADVFHGGSAYGPQMKSLSDGLDILVATPGRVMDHLQKGALSLADVRHAVLDEADEMLNMGFADDIETIFSYVNVQECQVLLFSATVPSWVRNIANKYTANPLTVDAVGKNVNKLATTVKHLSIEVSARH--RSSMLEDIITYY-GKGSHAIVFTNSKAECDDLSDGQTFKTLTSQVLHGDISQHQRDQTIKAFRAKGFQVLVATDVAARGIDVSDIDLVVQYRPPRDPDSYVHRSGRTGRAGRPGVAVTLYAENEIRDIRKIEQGVGQGFRFERGAVPSAEQVMSLAGTVAREQIKGVSDEMLEFFRESA----KELLEEEESGDKEL-----------LLAKCLAAIARKTHVTRRSMLTGEPDKVTVQMVAPRQLTSGDVMFAVGKLGRAAGFEPMVGKIAVAKDPTTAVFDMATDAADQLIKFSKEQNLESIEFSMCPVLPLLQEVP-----GGGRFGGG 2721
            ++G  P++    V P+TVA L  +G  +FT +Q+  +  V  GRD+I +SRTGTGKTIAFGLP+++ +         R   RGR+PR LV+ PTRELARQV  EL TLGR +     VFHGG+ YGPQ  SL +G+DILVATPGR++DHL +G L L DVRH VLDEADEML+MGF+ DIE + S+V++   Q LLFSAT PSW++ I+ +Y  +PL +DAVG N  + ATTV H ++ V      R S+LED+IT   G  S  IVFT +K E D+LS G  F+ L++ VLHGD+SQ QRD T+  F++  F+VLVATDVAARGID+S++D+VVQ   P++ DSYVHR+GRTGRAG+ GV++ LY + + R + ++E  +G GF+F++   P+   V+S A   A   +  V + +L + ++ A    +E++E+ +S   E            L+A+ LA    KT V   S++TGE    T+ + APR L   DV+FAV KL R   FE  +GKI + KDP+ AVFD+ +  A + ++F +EQ+L+   F +C  LP LQ V      GGG  GGG
Sbjct:  137 NKGLTPIDGFSQVHPRTVADLSKKGFTHFTDIQSQAFLPVFEGRDVIARSRTGTGKTIAFGLPIVEAIAASG-----RELDRGRAPRLLVMAPTRELARQVAAELGTLGRAYRFSVAVFHGGAPYGPQEGSLRNGIDILVATPGRILDHLNRGGLKLDDVRHVVLDEADEMLDMGFSKDIEEVLSFVDMDAAQTLLFSATTPSWIQRISAQYMTDPLRLDAVGANEQRTATTVAHKAMLVPDNDEVRMSLLEDVITVEAGVESKTIVFTQTKREADELSSGSAFRVLSAGVLHGDLSQKQRDVTLAQFKSGKFKVLVATDVAARGIDISNVDVVVQTSMPQNSDSYVHRAGRTGRAGKKGVSIVLYTQRQRRGVSRLEHEIGHGFKFQKHTAPTPSTVISAAADNAVAALPVVDETVLSYLKDPASKLYEEIIEKAQSNTPEDEAVDVADATSDLIARLLALATGKTEVKSWSLMTGELGITTLMVKAPRALKQSDVVFAVSKLARHGEFEINIGKIQLGKDPSEAVFDLPSSQALKFMQFVEEQDLQKFAFEVCSELPELQFVADRYGGGGGYRGGG 709          
BLAST of mRNA_C-linearis_contig104.920.1 vs. uniprot
Match: A0A1Z5KKE6_FISSO (RNA helicase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KKE6_FISSO)

HSP 1 Score: 454 bits (1167), Expect = 6.880e-137
Identity = 271/594 (45.62%), Postives = 359/594 (60.44%), Query Frame = 1
Query: 1093 VDPKTVAALKARGIENFTPVQAITYDHVLTGRDIIGKSRTGTGKTIAFGLPVIQHLGRFAEDHKERTYQ--RGRSPRFLVVCPTRELARQVYTELDTLGRGFGLKADVFHGGSAYGPQMKSLSDGLDILVATPGRVMDHLQKGALSLADVRHAVLDEADEMLNMGFADDIETIFSYV---NVQECQVLLFSATVPSWVRNIANKYTANPLTVDAVGKNVNKLATTVKHLSIEV--SARHRSSMLEDIITYY------------------------------GKGSH--------AIVFTNSKAECDDLSDGQTFKTLTSQVLHGDISQHQRDQTIKAFRAKGFQVLVATDVAARGIDVSDIDLVVQYRPPRDPDSYVHRSGRTGRAGRPGVAVTLYAENEIRDIRKIEQGVGQGFRFERGAVPSAEQVMSLAGTVAREQIKGVSDEMLEFFRESAKELLEEEESGDKELLLAKCLAAIARK-THVTRRSMLTGEPDKVTVQMVAPRQ-LTSGDVMFAVGKLGRAAG------FEPMVGKIAVAKDPTTAVFDMATDAADQLIKFSKEQNLESIEFSMCPVLPLLQEVPGGGRFG 2715
            +D + +  L +RGI +FT VQ   +D VL GRD+IG+SRTGTGKT+AFGLP I  L +   + +E   +  RGR P  LV+CPTRELARQV  EL  +    GL  DVFHGG +Y PQ ++LS GLDI+V TPGRVMDHL +G LSL +++  VLDEADEMLNMGFA+D+E I       N  + Q LLFSAT P WV  I  +Y  N L +DA G    ++A+TV+HL+++V      + ++LEDII                                  K  H         IVF  +K   D+L  G  FK+LT+Q LHGD+SQ QRD T+ AFRA  F VLVATDVAARGID+ D+DLVVQ  PPRD D+YVHRSGRTGRAG  GV+V ++   + RDI +IE+ +G  FRF+    PS E  ++ A   +    +G+ +E+   F ESA  LL +E+  D   ++A+CLAAI+R+ T V  RS+LTGE   VTVQM+  R+ +   DV+F V KL R +       FE  +GKI +A+D  TA+FDM+ + A +L++FSK+ +     FS+   +    EV  G  FG
Sbjct:   98 LDSRVLDVLNSRGITHFTKVQGEAFDPVLAGRDVIGRSRTGTGKTLAFGLPSIARLNKLLANRREANGRLPRGRLPGMLVLCPTRELARQVKDELAAVAEPLGLYVDVFHGGVSYDPQSRALSQGLDIVVGTPGRVMDHLDRGTLSLNELQIVVLDEADEMLNMGFAEDVEVILEGAGKSNKDKTQCLLFSATTPKWVNEIGRRYQRNVLEIDATGNQDARVASTVRHLAVQVPPGVSAKKAILEDIIAVEISKDAGGDSESATDESENEFHNPVAAAAKKAKKQHLQQKIFGKTIVFCETKKMADELVSGGVFKSLTAQALHGDVSQKQRDATLNAFRAGAFNVLVATDVAARGIDIQDVDLVVQMDPPRDVDTYVHRSGRTGRAGNKGVSVLMFNPQQSRDIVRIERDLGHNFRFQLTGPPSIEAALNAAAKTSALACQGIPEEVSTHFEESAAALLADEDE-DPVKVVARCLAAISRRATQVESRSLLTGEVGMVTVQMMNERRSVAPNDVLFTVSKLARLSRESADLTFENDIGKI-LARDDKTAIFDMSLEDAKKLVEFSKDVDAGGNTFSILKEM----EVERGNNFG 685          
BLAST of mRNA_C-linearis_contig104.920.1 vs. uniprot
Match: B7G0R3_PHATC (RNA helicase n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G0R3_PHATC)

HSP 1 Score: 452 bits (1164), Expect = 5.390e-136
Identity = 261/603 (43.28%), Postives = 369/603 (61.19%), Query Frame = 1
Query: 1084 EKDVDPKTVAALKARGIENFTPVQAITYDHVLTGRDIIGKSRTGTGKTIAFGLPVIQHLGRFAEDHKER----TYQRGRSPRFLVVCPTRELARQVYTELDTLGRGFGLKADVFHGGSAYGPQMKSLSDGLDILVATPGRVMDHLQKGALSLADVRHAVLDEADEMLNMGFADDIETIFSYV---NVQECQVLLFSATVPSWVRNIANKYTANPLTVDAVG-KNVNKLATTVKHLSIEVS--ARHRSSMLEDIITYY--------------------------GKGSHA---------IVFTNSKAECDDLSDGQTFKTLTSQVLHGDISQHQRDQTIKAFRAKGFQVLVATDVAARGIDVSDIDLVVQYRPPRDPDSYVHRSGRTGRAGRPGVAVTLYAENEIRDIRKIEQGVGQGFRFERGAVPSAEQVMSLAGTVAREQIKGVSDEMLEFFRESAKELLEEEESGDKELLLAKCLAAIARK-THVTRRSMLTGEPDKVTVQMVAPR--QLTSGDVMFAVGKLGRAAG------FEPMVGKIAVAKDPTTAVFDMATDAADQLIKFSKEQNLESIEFSMCPVLPLLQEVP----GGGRFGG 2718
            E  +D + +  L  +GI +FTPVQA  +  V+  RD+IG+SRTGTGKT+AFGLP +  L  F  ++ +R      + GR    +++CPTRELARQV  EL  + R  GL  +VFHGG +Y PQ ++L  G+D++V TPGRV+DH+++G L L++   AVLDEADEMLNMGFADD+E +   V   N Q+ Q LLFSAT PSWV+ I  +Y  + L +D+   K   ++A TV+HL+++++  A  + S+LEDII                              KG+ A         IVFT +K E D+L  G  FK+LT+Q LHGD+ Q QRD T+ AFR+  F VLVATDVAARGID+ D+DLV+Q+ PPRD D+YVHRSGRTGRAG+ GV+V L+ + + RDI +IE+ +G GF+F+    PSAE  ++ A   +    + + +E  EFF+ESA +LLE ++  D   ++A+CLAA++R+ + V  RS+LTG+    TV+MV  R   + + DVMF +GKL R +       F+  VG+I    +  + VFDM  + A  L+KFSK  +     F +   L + ++      GGGR GG
Sbjct:  141 EAGLDQRVIDVLSEKGITSFTPVQAEAFGPVMARRDVIGRSRTGTGKTLAFGLPALTRLVTFTTENGKRDARGVMKSGRKVSMIILCPTRELARQVQEELSQVARPLGLFVEVFHGGVSYDPQSRALRQGVDVIVGTPGRVIDHIERGTLDLSECDIAVLDEADEMLNMGFADDVEVVLKNVGSNNPQKTQCLLFSATTPSWVKEIGRQYQKDVLAIDSTADKGGARVAETVRHLAVQLAPGADAKRSVLEDIIAVEISKDADIGKIELEIANPIAAAAHKRKNKGNQAMQQKIFGKTIVFTETKREADELVSGGVFKSLTAQALHGDVGQKQRDSTLAAFRSGAFNVLVATDVAARGIDIQDVDLVIQFDPPRDVDTYVHRSGRTGRAGKKGVSVLLFNQRQSRDIVRIERDLGHGFKFDLVGPPSAEATLNAAAKTSAIATQSIPEETAEFFKESAAKLLESQDPVD---VVARCLAAVSRRASEVQSRSLLTGQVGFATVEMVNERGRPVAANDVMFTIGKLSRMSNQEGDLAFDSQVGRIQTNSESGSVVFDMNVEDAKNLVKFSKTVDAGGAAFQLLKALAVERDRNFGRMGGGRDGG 740          
BLAST of mRNA_C-linearis_contig104.920.1 vs. uniprot
Match: A0A7S3ZWQ0_9STRA (RNA helicase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZWQ0_9STRA)

HSP 1 Score: 448 bits (1152), Expect = 4.890e-135
Identity = 268/622 (43.09%), Postives = 356/622 (57.23%), Query Frame = 1
Query: 1039 VSLVEVGDEGACPVEEKDVDPKTVAA---------LKARGIENFTPVQAITYDHVLTGRDIIGKSRTGTGKTIAFGLPVIQHLGRFAEDHKERTYQRGRSPRFLVVCPTRELARQVYTELDTLGRGFGLKADVFHGGSAYGPQMKSLSDGLDILVATPGRVMDHLQKGALSLADVRHAVLDEADEMLNMGFADDIETIFS-------------------------------------YVNVQECQVLLFSATVPSWVRNIANKYTANPLTVDAVGKNVNKLATTVKHLSIEVSARH--RSSMLEDIITY-------------YGKGSHAIVFTNSKAECDDLSDGQTFKTLTSQVLHGDISQHQRDQTIKAFRAKGFQVLVATDVAARGIDVSDIDLVVQYRPPRDPDSYVHRSGRTGRAGRPGVAVTLYAENEIRDIRKIEQGVGQGFRFERGAVPSAEQVMSLAGTVAREQIKGVSDEMLEFFRESAKELLEEE--ESGDKEL-LLAKCLAAIARKTHVTRRSMLTGEPDKVTVQMVAPRQLTSGDVMFAVGKL--------GRAAGFEPMVGKIAVAKDPTTAVFDMATDAADQLIKFSKEQNLESIEFSMCPVLPLLQ 2688
            V  V VG+E   P  E + DP  +           L  RGI  FT +Q  +Y+ V  GRD++GKSRTGTGKT+AFGLP+I+ L     + +    +RGR P  LV+ PTRELA+QV+ EL  L    G     FHGG +YGPQ  +L  G+DILVAT GRV+DH+ +G L L D  H VLDEADEML+MGFADD+E IF                                          +  Q LLFSAT P W++ +  ++  + + VD VG    + ATTV H ++ V   +  R+S+LEDII+                 G   IVFT +K ECD+L+ G  F+ L++QVLHGDI Q QR+ T+  FR   F VLVATDVAARGIDV  +DLVVQ+R PRD + YVHRSGRTGRAGR G AV LY + E RD+R +E+  G   +F+R   PSA +V+  A   A   +  V D+++  F E+AK+L  +E  E+ D+   L+A+CLAA+AR+  +  RS+LTGE D+ T+ M APR L + DV++AV KL        G        VG + V K+P+ AVFD+ +  A +L+ F +EQN     F +C VLP LQ
Sbjct:   65 VEDVVVGEE-VVPDAEPEKDPMAIEGRISDRQAERLAERGITTFTEIQHRSYEPVFEGRDLLGKSRTGTGKTVAFGLPIIEKLAEMRSNGEYDHKRRGRGPAMLVLTPTRELAKQVHDELKYLADTHGFSTTCFHGGVSYGPQEGALRRGVDILVATVGRVIDHIDRGNLQLNDAYHVVLDEADEMLSMGFADDVERIFGECPAGKAKGMGSGGGAPAPDDAFDLDELLGEEAPPAPVAESRRPQTLLFSATSPGWIKKMTRRFMTDHVFVDVVGDATQQAATTVTHKAVLVPRSNDARASLLEDIISVELSQRQGQVTDEQQNGGGRVIVFTATKRECDELAGGPAFQRLSAQVLHGDIGQSQREATLAQFRRGQFSVLVATDVAARGIDVKGVDLVVQFRTPRDAEGYVHRSGRTGRAGRDGTAVVLYDDREERDVRSLERETG--VKFQRLGPPSAGRVLEAASLDAARALTRVQDDVVPHFLETAKQLCADELAETSDEAASLVARCLAAVARQNELRARSVLTGEADRTTLLMSAPRPLKTSDVVYAVSKLLERVPKQEGATPNDNDRVGAVRVCKEPSQAVFDVRSTTAQRLLAFCEEQNFNKFTFEVCEVLPQLQ 683          
BLAST of mRNA_C-linearis_contig104.920.1 vs. uniprot
Match: A0A7S3V908_9STRA (RNA helicase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V908_9STRA)

HSP 1 Score: 448 bits (1152), Expect = 1.490e-133
Identity = 262/592 (44.26%), Postives = 350/592 (59.12%), Query Frame = 1
Query: 1087 KDVDPKTVAALKARGIENFTPVQAITYDHVLTGRDIIGKSRTGTGKTIAFGLPVIQHLGRFAEDHKERT----YQRGRSPRFLVVCPTRELARQVYTELDTLGRGFGLKADVFHGGSAYGPQMKSLSDGLDILVATPGRVMDHLQKGALSLADVRHAVLDEADEMLNMGFADDIETIFSYV---NVQECQVLLFSATVPSWVRNIANKYTANPLTVDAVGKNVNKLATTVKHLSIEV--SARHRSSMLEDIITY---------------------------------YGKGSHA---------IVFTNSKAECDDLSDGQTFKTLTSQVLHGDISQHQRDQTIKAFRAKGFQVLVATDVAARGIDVSDIDLVVQYRPPRDPDSYVHRSGRTGRAGRPGVAVTLYAENEIRDIRKIEQGVGQGFRFERGAVPSAEQVMSLAGTVAREQIKGVSDEMLEFFRESAKELLEEEESGDKELLLAKCLAAIARKTH-VTRRSMLTGEPDKVTVQM--VAPRQLTSGDVMFAVGKLGRAA------GFEPMVGKIAVAKDPTTAVFDMATDAADQLIKFSKEQNLESIEFSMCPVLPL 2682
            K +D + +  L A+GI  FT VQ   ++ VL GRD+IG+SRTGTGKTIAFG P I  +   A+ +         +RGR   FLV+CPTRELARQV  EL  +G+   L   +FHGG +Y PQ ++L +G+DILV TPGRV+DH+Q+G L+L++    VLDEADEMLNMGFADD+E I   V   N Q+ Q LLFSAT P W++ I   Y +NP+++DA   N  + ATTV+H++I+V      + S+LEDII                                      G++A         IVFT +K + D+L  G  FK+L++Q +HGDI Q QRD T+ AFRA  F VLVATDVAARGID+ D+DLVVQ+ PPR+ D+YVHRSGRTGRAG+ G +V L+   + RDI KIE+ VG  F+FE    PS+E  M  A   +    + V D    +F+E+A  LL   E  +   ++AKCLAAI+R+   V  RS+LTGE    T++M     R +T GDVM+ + KL R +      GF+  VGKI        AVFD+  D A +LI FSK+ +    +F +   L L
Sbjct:  187 KGMDQRLIDTLSAKGITTFTEVQGKAFEPVLAGRDVIGRSRTGTGKTIAFGFPTIHRIAEMAKTNGNMDSYGKMRRGRGVSFLVLCPTRELARQVGDELSLVGKPLNLYTTIFHGGVSYDPQARALRNGIDILVGTPGRVIDHIQRGNLNLSECDTVVLDEADEMLNMGFADDVELILDGVGSSNEQKTQCLLFSATTPRWIKEIGRNYQSNPISIDASADNSARTATTVRHIAIQVPPGPDSKKSILEDIIAVEISKDIDKAKIAGEDKEEEDLSHNPIAMAAXXXXXXGNNAMQQKIFGKTIVFTETKRDADELVSGGVFKSLSAQAIHGDIGQKQRDATLNAFRAGAFNVLVATDVAARGIDIKDVDLVVQFSPPREVDTYVHRSGRTGRAGQKGTSVLLFDPRQARDIVKIERSVGHNFKFELAGPPSSEMAMIAASKTSAIACQSVPDSTSAYFKEAATNLLAGGEPAED--IIAKCLAAISRRAGGVESRSLLTGEGGLATIEMSNTTGRPVTPGDVMYTISKLSRMSKQGDDLGFDSDVGKIKSNAQTGVAVFDVGVDDAKKLIDFSKDIDAGGAQFRILKELEL 776          
BLAST of mRNA_C-linearis_contig104.920.1 vs. uniprot
Match: A0A7S4R924_9STRA (RNA helicase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R924_9STRA)

HSP 1 Score: 445 bits (1145), Expect = 1.750e-133
Identity = 262/579 (45.25%), Postives = 352/579 (60.79%), Query Frame = 1
Query: 1108 VAALKARGIENFTPVQAITYDHVLTGRDIIGKSRTGTGKTIAFGLPVIQHLGRFAEDHKERTYQRGRSPRFLVVCPTRELARQVYTELDTLGRGFGLKADVFHGGSAYGPQMKSLSDGLDILVATPGRVMDHLQKGALSLADVRHAVLDEADEMLNMGFADDIETIFSYV---NVQECQVLLFSATVPSWVRNIANKYTANPLTVDAVGKNVN-KLATTVKHLSIEVSARHRS--SMLEDIITY----------YGKGSH----------------------------------AIVFTNSKAECDDLSDGQTFKTLTSQVLHGDISQHQRDQTIKAFRAKGFQVLVATDVAARGIDVSDIDLVVQYRPPRDPDSYVHRSGRTGRAGRPGVAVTLYAENEIRDIRKIEQGVGQGFRFERGAVPSAEQVMSLAGTVAREQIKGVSDEMLEFFRESAKELLEEEESGDKELLLAKCLAAIARKT-HVTRRSMLTGEPDKVTVQMV--APRQLTSGDVMFAVGKLGRAAG-------FEPMVGKIAVAKDPTTAVFDMATDAADQLIKFSKEQNLESIEFSM 2664
            +  L A+GI  FTPVQ   +  V+ GRD+IG+SRTGTGKT+AFGLP I  L    E  +     RGR P  +++CPTRELARQV+ E+  + R  GL + VFHGG +YGPQ  +L  GLDILV TPGRV+DHL +G + L++V   VLDEADEMLNMGFA+D+E I   V   N ++ Q LLFSAT P WV+ I N+Y  + +++D+       + ATTV+H++I+V   H S  S+LEDII            +GK                                      IVFT +K + D+L  G  FK+LT+Q LHGD+ Q QRD T+ AFRA  F VLVATDVAARGID++D+DLV+Q+ PPRD D+YVHRSGRTGRAGR G +V L+  N+ RDI KIE+ +G GF+FE    PS E  ++ A   +    + V +E  +FF ++A  LLE  E  D + ++A+CLAAI+R++  V  RS+LTGE   VTV+M     R ++ GDVMF V KL R +        F+  VGKI    +  +A+FDM  + A +L++FSK+ +     FS+
Sbjct:  112 IDVLSAKGITQFTPVQGEAFAPVVAGRDVIGRSRTGTGKTLAFGLPSITRLTAPDETGQVPPRLRGRKPSMVILCPTRELARQVHEEVAHVARPLGLFSAVFHGGVSYGPQASALRQGLDILVGTPGRVIDHLDRGNIDLSEVDIVVLDEADEMLNMGFAEDVEHILGGVGSANEKKTQFLLFSATTPPWVKEIGNQYQKDVISIDSTSDETGARTATTVRHMAIQVPPGHDSAKSILEDIIAVEISKDIDPHAFGKTKEQEELAAINPIAAXXXXXXXXKNANSAMQQKIFGKTIVFTETKRDADELVSGSIFKSLTAQALHGDVGQKQRDATLAAFRAGAFNVLVATDVAARGIDITDVDLVIQFEPPRDVDTYVHRSGRTGRAGRKGTSVLLFRPNQSRDIVKIERSLGHGFKFELAGPPSIEAALTAAAKTSAIACRSVPEETAKFFTDAAGSLLENGE--DPQEVVARCLAAISRRSSEVQSRSLLTGELGLVTVEMTNNRDRPVSPGDVMFTVSKLSRMSQRGDGNLTFDSDVGKIHSDFETGSAIFDMGVEDAKKLVEFSKDIDAGGAVFSI 688          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig104.920.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LE98_ECTSI0.000e+083.59RNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D... [more]
A0A836CKS6_9STRA1.520e-20059.20RNA helicase (Fragment) n=1 Tax=Tribonema minus Ta... [more]
A0A835ZP19_9STRA1.120e-16558.85RNA helicase n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A7S2V2B9_9STRA6.700e-15248.70RNA helicase (Fragment) n=1 Tax=Fibrocapsa japonic... [more]
A0A7S2DBW6_9STRA8.100e-14946.54RNA helicase (Fragment) n=1 Tax=Dictyocha speculum... [more]
A0A1Z5KKE6_FISSO6.880e-13745.62RNA helicase n=1 Tax=Fistulifera solaris TaxID=151... [more]
B7G0R3_PHATC5.390e-13643.28RNA helicase n=1 Tax=Phaeodactylum tricornutum (st... [more]
A0A7S3ZWQ0_9STRA4.890e-13543.09RNA helicase n=1 Tax=Pelagomonas calceolata TaxID=... [more]
A0A7S3V908_9STRA1.490e-13344.26RNA helicase n=1 Tax=Chaetoceros debilis TaxID=122... [more]
A0A7S4R924_9STRA1.750e-13345.25RNA helicase n=1 Tax=Ditylum brightwellii TaxID=49... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig104contigC-linearis_contig104:515617..526370 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score1275.4
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D8LE98
KEGG koko:K16911
KEGG Pathwayko01110,map01110
Hectar predicted targeting categorychloroplast
EggNOG free text desc.helicase activity
EggNOG OGsCOG0513@1,KOG0331@2759
Ec32 ortholog descriptionDEAD box helicase
Ec32 orthologEc-00_001430.1
EC3.6.4.13
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03009,ko03036
Exons11
Model size5054
Cds size2805
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927390.0514061-UTR-C-linearis_contig104:515616..5159311622927390.0514061-UTR-C-linearis_contig104:515616..515931Chordaria linearis ClinC8C monoicousUTRC-linearis_contig104 515617..515931 +
1690879671.7146194-UTR-C-linearis_contig104:515616..5159311690879671.7146194-UTR-C-linearis_contig104:515616..515931Chordaria linearis ClinC8C monoicousUTRC-linearis_contig104 515617..515931 +
1622927390.2040274-UTR-C-linearis_contig104:524436..5263701622927390.2040274-UTR-C-linearis_contig104:524436..526370Chordaria linearis ClinC8C monoicousUTRC-linearis_contig104 524437..526370 +
1690879671.8509243-UTR-C-linearis_contig104:524436..5263701690879671.8509243-UTR-C-linearis_contig104:524436..526370Chordaria linearis ClinC8C monoicousUTRC-linearis_contig104 524437..526370 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927390.0611835-CDS-C-linearis_contig104:515931..5162401622927390.0611835-CDS-C-linearis_contig104:515931..516240Chordaria linearis ClinC8C monoicousCDSC-linearis_contig104 515932..516240 +
1690879671.730815-CDS-C-linearis_contig104:515931..5162401690879671.730815-CDS-C-linearis_contig104:515931..516240Chordaria linearis ClinC8C monoicousCDSC-linearis_contig104 515932..516240 +
1622927390.072045-CDS-C-linearis_contig104:517369..5179001622927390.072045-CDS-C-linearis_contig104:517369..517900Chordaria linearis ClinC8C monoicousCDSC-linearis_contig104 517370..517900 +
1690879671.7418633-CDS-C-linearis_contig104:517369..5179001690879671.7418633-CDS-C-linearis_contig104:517369..517900Chordaria linearis ClinC8C monoicousCDSC-linearis_contig104 517370..517900 +
1622927390.0827827-CDS-C-linearis_contig104:518346..5185471622927390.0827827-CDS-C-linearis_contig104:518346..518547Chordaria linearis ClinC8C monoicousCDSC-linearis_contig104 518347..518547 +
1690879671.7544434-CDS-C-linearis_contig104:518346..5185471690879671.7544434-CDS-C-linearis_contig104:518346..518547Chordaria linearis ClinC8C monoicousCDSC-linearis_contig104 518347..518547 +
1622927390.0933228-CDS-C-linearis_contig104:519017..5192811622927390.0933228-CDS-C-linearis_contig104:519017..519281Chordaria linearis ClinC8C monoicousCDSC-linearis_contig104 519018..519281 +
1690879671.7640445-CDS-C-linearis_contig104:519017..5192811690879671.7640445-CDS-C-linearis_contig104:519017..519281Chordaria linearis ClinC8C monoicousCDSC-linearis_contig104 519018..519281 +
1622927390.103021-CDS-C-linearis_contig104:519724..5198351622927390.103021-CDS-C-linearis_contig104:519724..519835Chordaria linearis ClinC8C monoicousCDSC-linearis_contig104 519725..519835 +
1690879671.7727425-CDS-C-linearis_contig104:519724..5198351690879671.7727425-CDS-C-linearis_contig104:519724..519835Chordaria linearis ClinC8C monoicousCDSC-linearis_contig104 519725..519835 +
1622927390.1126256-CDS-C-linearis_contig104:520286..5204721622927390.1126256-CDS-C-linearis_contig104:520286..520472Chordaria linearis ClinC8C monoicousCDSC-linearis_contig104 520287..520472 +
1690879671.785156-CDS-C-linearis_contig104:520286..5204721690879671.785156-CDS-C-linearis_contig104:520286..520472Chordaria linearis ClinC8C monoicousCDSC-linearis_contig104 520287..520472 +
1622927390.1217895-CDS-C-linearis_contig104:521064..5212241622927390.1217895-CDS-C-linearis_contig104:521064..521224Chordaria linearis ClinC8C monoicousCDSC-linearis_contig104 521065..521224 +
1690879671.799632-CDS-C-linearis_contig104:521064..5212241690879671.799632-CDS-C-linearis_contig104:521064..521224Chordaria linearis ClinC8C monoicousCDSC-linearis_contig104 521065..521224 +
1622927390.1317432-CDS-C-linearis_contig104:521692..5219671622927390.1317432-CDS-C-linearis_contig104:521692..521967Chordaria linearis ClinC8C monoicousCDSC-linearis_contig104 521693..521967 +
1690879671.809217-CDS-C-linearis_contig104:521692..5219671690879671.809217-CDS-C-linearis_contig104:521692..521967Chordaria linearis ClinC8C monoicousCDSC-linearis_contig104 521693..521967 +
1622927390.1422508-CDS-C-linearis_contig104:522230..5222901622927390.1422508-CDS-C-linearis_contig104:522230..522290Chordaria linearis ClinC8C monoicousCDSC-linearis_contig104 522231..522290 +
1690879671.8174424-CDS-C-linearis_contig104:522230..5222901690879671.8174424-CDS-C-linearis_contig104:522230..522290Chordaria linearis ClinC8C monoicousCDSC-linearis_contig104 522231..522290 +
1622927390.153404-CDS-C-linearis_contig104:522754..5230391622927390.153404-CDS-C-linearis_contig104:522754..523039Chordaria linearis ClinC8C monoicousCDSC-linearis_contig104 522755..523039 +
1690879671.8254569-CDS-C-linearis_contig104:522754..5230391690879671.8254569-CDS-C-linearis_contig104:522754..523039Chordaria linearis ClinC8C monoicousCDSC-linearis_contig104 522755..523039 +
1622927390.193302-CDS-C-linearis_contig104:524013..5244361622927390.193302-CDS-C-linearis_contig104:524013..524436Chordaria linearis ClinC8C monoicousCDSC-linearis_contig104 524014..524436 +
1690879671.8336508-CDS-C-linearis_contig104:524013..5244361690879671.8336508-CDS-C-linearis_contig104:524013..524436Chordaria linearis ClinC8C monoicousCDSC-linearis_contig104 524014..524436 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig104.920.1prot_C-linearis_contig104.920.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig104 515932..524436 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig104.920.1

>prot_C-linearis_contig104.920.1 ID=prot_C-linearis_contig104.920.1|Name=mRNA_C-linearis_contig104.920.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=935bp
MTSQRSTTLAVLGLLAGFVNVDAFRLIPASPGAVSSSLARAQQQSAVASR
GASTRRTWRSAHGLTMSSPAVGNDLPATEELEDKPSRDSVMDELDAILGD
VKMDSTAKPASSAKNTAAVLGQDLDSLLGAPGAPPSAAATPATKQNSDVG
DLNLDDLLGPGANSAPPQRYSGGGTAGGGGAARAPPASRAQPAQGWGSPT
DGQAPPPQQRMSYSGEFGAASGRYGDMATAAASKVLKGDQLVSLVEVGDE
GACPVEEKDVDPKTVAALKARGIENFTPVQAITYDHVLTGRDIIGKSRTG
TGKTIAFGLPVIQHLGRFAEDHKERTYQRGRSPRFLVVCPTRELARQVYT
ELDTLGRGFGLKADVFHGGSAYGPQMKSLSDGLDILVATPGRVMDHLQKG
ALSLADVRHAVLDEADEMLNMGFADDIETIFSYVNVQECQVLLFSATVPS
WVRNIANKYTANPLTVDAVGKNVNKLATTVKHLSIEVSARHRSSMLEDII
TYYGKGSHAIVFTNSKAECDDLSDGQTFKTLTSQVLHGDISQHQRDQTIK
AFRAKGFQVLVATDVAARGIDVSDIDLVVQYRPPRDPDSYVHRSGRTGRA
GRPGVAVTLYAENEIRDIRKIEQGVGQGFRFERGAVPSAEQVMSLAGTVA
REQIKGVSDEMLEFFRESAKELLEEEESGDKELLLAKCLAAIARKTHVTR
RSMLTGEPDKVTVQMVAPRQLTSGDVMFAVGKLGRAAGFEPMVGKIAVAK
DPTTAVFDMATDAADQLIKFSKEQNLESIEFSMCPVLPLLQEVPGGGRFG
GGGRGGGRGGRGGRGRGGGGYRGGRSSYGGGGGGSYGGGGGYRGGGGGGG
GYRGGGGGGYRGGGGSSYGGGGSSYGGGGSSYGGGGSSYGGGGGRSSYGG
GGGGSYGGGGGSYRGGGSRGGGGSSYGGGGNSDW*
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mRNA from alignment at C-linearis_contig104:515617..526370+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig104.920.1 ID=mRNA_C-linearis_contig104.920.1|Name=mRNA_C-linearis_contig104.920.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=10754bp|location=Sequence derived from alignment at C-linearis_contig104:515617..526370+ (Chordaria linearis ClinC8C monoicous)
ACTCGAAGAAGAGCGATTCCGAGGGGCAGCTACAGATGGAAACGTGCGGG GGGGGGGGCTAAAGAGCACTTACGTTGTCGTTATTCCCTTTCGCTGCCGC TTCACGTACCGGCGATCGATACACACACACCAACCGAGAGCAATACACCA TCGGAAGCTCTCACGGCAGCGAGGTTTTCACGACACCCCGCGAACCTAAG CACACTCCAGGCCCGAGGTGTGGCATAAGCTTGCTCTCTCCGCTGCTGCG TGTCGACCGCAAGAACGTCCCCCGCGCCTCGCGCCTCGGTGTCACACCAC ACCTCGCCAAACACGATGACATCTCAACGCAGCACCACACTGGCCGTGCT CGGCCTCCTGGCCGGCTTCGTCAACGTCGATGCGTTCCGCCTGATTCCCG CGTCGCCGGGAGCGGTGTCCTCGTCGCTCGCCCGCGCGCAGCAGCAGTCA GCGGTGGCAAGTCGTGGGGCTTCAACCCGGCGGACGTGGCGGTCAGCCCA CGGGTTGACCATGAGCTCGCCAGCTGTCGGGAACGACCTCCCCGCGACCG AGGAGCTCGAGGACAAGCCCTCTCGGGACAGTGTCATGGACGAGCTTGAT GCGATTCTGGGTGACGTGAAGATGGTGAGTCGTGGTTGGTTATGATGGAA AGCGCGGTTAGGTTTTCGAAGGTTTGTGTGAAACATGGAAACATGATGAT GTCGGGATGCTCGTTTGCGCACGCACAGAGAAGGGCTCGATGTCGGCAGG AGTTGACGTTGGCCTCGCCGAGTCCGACACAGCCCCTGCCAAGGCGTAAA CCTGTCACCTGGTTTGTTGCTAGGGGCTCGTGGGGTTCTGCGGTATTGTT GCCTTCGATAAAGGTTGGCGTCGAAGATGTGGTAGGCGGTTTGTGTGGGG TGCCCAGTAACCACACGTCCGATTTTCCTGACACACACGTCTCTCCTACA AAAAAACACATGTGGCGCACAGCCGCGTACGTTCTCTTTGTCACCTCCAA ACCGGTGTTTTTCCTGTAGAGGCGATGGGAGTCTCGCGTGTGCGTACAGG GGATCGGGAGAGTTGTCTCGTGGAGTCGAATCGTTGTTGCCGACGACGTT GTTGGCGATGGCTTTGGTGTTCGTCTGAAAATAGAAATACATCTAGCGCT GCCCACACGCTCTGTTATTGTGTCATGCGGTTGCGGCGGTTAGTTGTGAT TGATGCTGAGACCCCACCAAACGTTCGAACCCTGCCGCAGTCGAAGCGTT GCTTCGCTTTTTTGTGTGATGGAAAAAAGATGCAAACGTTTGCAGCAGTT GCGCTCCGCGCTCTGAAAACGCAGGGCTTCTCTCGCCCACACAGTCGTAT GTTTTTCCTCGTACATGATGCGTAACTGCTGATCCGCTTGGTGCGTTCAA CCTCCGGTGACGACCCGTACATGGCGATGTCGATCAATATCCCGGGTAAA CGAGCATGGCCCGTGTTTTGGCTACCCCTGTTGTAGTGCAAGGAAGCAAA CCTGTGTGATGCAACCATGTCACTGCTGTACGCTTACAGTTGCCTCACCA TTTCCCCGCCCTTGCTATCGAGTACAGTACTTCGAACATGATATTTCAAG GCCCTTCCCCAATCAATACCCCGAGAACCAAGGCCCTTAATTTCCTCCCG CACACGCCGCCCTCCCCGTTCCCCCACTCTTTTCCCTCGTGATTCATGTG CCACCCTCACCGAAAACACGCACACACAAACATACACTCCCTGCCCCCGG CAGGACTCCACCGCAAAGCCCGCCTCTAGCGCCAAGAACACCGCGGCTGT CCTCGGCCAGGACCTCGACTCCCTCCTCGGGGCCCCCGGCGCGCCGCCTT CCGCAGCGGCAACGCCCGCAACGAAGCAAAACAGTGACGTCGGCGACCTC AACCTGGATGACTTGCTCGGCCCGGGGGCCAACTCCGCGCCGCCGCAGCG ATATTCGGGCGGGGGCACCGCCGGCGGCGGCGGCGCGGCCAGGGCACCCC CGGCGTCTCGCGCACAGCCGGCCCAGGGCTGGGGCTCGCCGACGGATGGC CAGGCGCCGCCCCCGCAGCAGCGCATGTCGTACAGCGGGGAGTTTGGCGC GGCCAGCGGCAGGTACGGGGACATGGCGACGGCGGCGGCGAGCAAGGTGT TGAAGGGCGACCAGCTGGTCTCCTTGGTGGAGGTCGGGGACGAGGGCGCG TGCCCTGTGGAGGAGAAGGACGTGGACCCCAAGACTGTGGCGGCGCTCAA GGCCCGCGGCATTGAGAACTTCACTCCTGTGCAGGTGTGTGTGTGTGTGT GTGTGTGTGTGTGTGTGCTTGTGCTTGTGTGTGTACTGCTGTAATGGTCG CGCTGTTGTCTTGCAGACGGTGATTGGTAGTGGGGATTTGGGCAAGGGTA TATTGTCGGTACCCATGTGTGTTGTGATCACGGTCTGCTAAATGTCTTTG GCTAAGTGTGTGTACAAGCACTAAATACTATGTACTAGGTACGTATCGGT GGCCATGCGTTCATGCGAAACGGTAGTGTTCCACGACTCGACAACCTGGG CGTTTTGTAAGGTGCTTTTACTGCCCTGTTGACGACGTTACGTTGACGAC GTTACGAAGAACACAGAAAGTAGCAGCGGTTCACAAACGTGCACATGCAA TCTTCTCCATCAACAGCCGCTCTTTTCTGGCTGGCGCTCATCCCTCACCC CCCTGCCCACTCCTCCCATCCCGTCTGCAGGCGATCACGTACGACCACGT CCTGACCGGGCGCGATATCATCGGCAAGTCCCGCACCGGGACGGGCAAGA CGATTGCCTTCGGCCTGCCGGTCATCCAGCACCTCGGCCGCTTCGCCGAA GACCACAAGGAGCGCACCTACCAGCGCGGCAGGTCGCCGCGGTTCCTCGT CGTGTGCCCGACGCGCGAGCTGGCCCGTCAGGTGGGTGTGTTGGGGTGGC GGTTCGTGTGATGAATGAGCGTGTCTGTGTCTTGTGTCTGTGTCGGGGGG GGGGTTGCTTCATGATTGGGTCTGCTACTGCTGTGTGTAGTCTATCATAG ATGTCAAGCCAGGTGTTGCCCTTGCTTGATCACCTGAAGGGAAGAAAGAA GCGCACGGATGTCGTTGAGGCACACACGAGATGGTGGTTTGTCAATACTC CAGTACCGCCAACCGTAAGTTTTTCGCGGCCGCATGCTCTATTTCTTCTT CGCAGTTGGCGTTAATTTTATTTTATTTCTCCCCGGCTCAACAAGGTGAA CAAACACCCCGTGAGTTGAATGTCGTGTGTCATTTCGTGCTTCCACAATG AGAACCTCCCAGAAATAAAATATAACCCCGGAGTATGTATCTCTCGCGTT CAACGGCCACGCAAGTAACACGTACACGACATGTTGCGTCGACCCGATCA GGTGTACACCGAGCTGGACACCCTCGGAAGAGGCTTCGGGCTCAAGGCCG ACGTGTTCCACGGCGGGTCCGCCTACGGCCCCCAGATGAAGTCTCTTTCC GACGGCCTCGACATCCTCGTCGCCACTCCCGGCCGCGTGATGGACCACCT GCAGAAGGGCGCCCTCTCCCTCGCGGACGTGCGGCACGCCGTCCTGGACG AGGCGGACGAGATGCTCAACATGGGCTTCGCCGACGACATCGAGACCATT TTCTCCTACGTTAACGCGAGTGTGCTACATATGACGGCAAAGGCTTGAGT GTTTTTAGTATGCGTTTGGCGTTGCGTTGTTTTAGGAGAAGCGGGGGGGG GGTAGGTTTGCGTTGGTGGGGCGGAGGAGAGGTGTGGTTTTGTTGCGCGG AGGGGGGGGGCGTGTGTTTGTTGGTTCGCCCTATGATGCCGCGAGAGCAA GCACGGGGGGCGTGATGAGAAATCTACCTAATAGAGCTTGCAAAATACTG CTGTGCCTCGCATGTATGTATTGCTTGGGTTGGCGCCGCCCAAGCTTAGC TTCTCTGCGGCGCTTGTCACACGAGTCTTTTTAGCGTTTTGAAGCGCACG CCATGCTGCTGTACCTCGCTTGCTGTTGCTGTTGCTGTTGTCCTCGGGCC TGAGCCTTTTGATTTATTTATTTTCGTTGCCGGCTGTCGCGTGTCCGTTC GTTCGCAGGTCCAGGAGTGCCAGGTTCTCCTGTTCAGCGCCACCGTGCCG AGCTGGGTGAGGAACATCGCCAACAAGTACACGGCCAACCCCCTCACCGT TGACGCCGTCGGCAAGAACGTGAGTACCGTACATTCCCATACACCCAAGG CGATGTTGGATGTCGTGGAACAGCTCCCGAGTTGCCGCCGTCTCGAGACG CTGTGGTGGGTGGTGATTTTGAAAGAATGGGGCATGTTAGTTGCCAGCCA AAGTGTTTTGTGTCCTTTTGTATCAAAGGCGGCTTTGGTATCAAGACGCA GTAGAAGAACGGCAGTTCTATTTATACACACGAAATACGTGTGTAGAGCA TTTTTGCGGTTGCCGGGTTTCGCTGAAAGCTGGCTGGCCATGCTCAATAT ACGTACGTACATGCATAAAATATGTTGACCTTCGGTATGATAGCAGCATG TTGCAAGCGGGGCTGTCCCTGCGGGCTGAACGACATGATCGCAACAACAA TATCGATTTGGTAACCCTCCCACCGCCGCCGCCGCCCGTGTGTTCTTAAC CGCTCTTCCCGCCATCGCAGGTGAACAAGCTGGCCACGACCGTCAAGCAC TTGTCCATCGAGGTTTCCGCGCGGCATCGTTCGAGCATGCTGGAGGACAT CATCACCTACTACGGCAAGGGCTCTCACGCCATCGTCTTCACGAACTCGA AGGCGGAGTGCGACGACCTCTCCGACGGCCAGACCTTCAAGACGCTCACG TCTCAGGTATGTCGGGTGAACGCGTGTAGGGGAAGCAAACGCTAAGCGTG GTTCGAGTCCAGAGATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT GTGCTTTTGTATGGCACAGCAGGCTAGGCTTCTTCTTTTAACTTTTAAGT TGTGTTCGGCGGCAACGCTCGGACGTCTGGCGCGCGGGAGTGAAAGTCCG TTGTCTTGCATGTAATGTTTAAGATACGAAATCGGAACACGACCGGCTCG GGTGATGGCGTAGGTGGCGTTTTTTCGTGCTTTTTAGCAAGAAGCGAAAG CAAAAATGATCACGCAAACACACATCGCTAAGAGGGTCCACTATCGGACG GTGGTGCACGCATCTGAATCTGATTGTATGCAACACCACCACCACAGCAG TCACAGAGACGGAGACACCACGGTTGTACTTTTTTCCCGAGTTGGTGATG TCGCCCGACACGCGATGGGTGTTCCTCTGCTCGGCACTCTCCCCCCTCCC ACCCACCCACCCGGCGGCAAACACGCACAGGCCTTGAAATGTGTGTGTTG TCGGACGACGGTTGCTGCTGTCTGTTGACCTGGTTGACCTTGAAACAGGT GCTTCACGGAGACATCTCCCAGCACCAGCGTGACCAGACCATTAAGGCGT TCCGCGCCAAGGGCTTTCAGGTCCTGGTGGCGACCGATGTTGCCGCTCGC GGTATCGACGTGTCGGACATCGACCTGGTCGTCCAGTACCGCCCTCCTCG CGACCCGGGTAAGATTGTCTTGATCAAGACCAATACAAATATTTAATCAT GCATGCCCTCCTCGCGACCCGGGTAAGATTGTCTTGATCAAGACCAATAC AAACATTTGATCATATTTTGTGTGTGTGATTTTTTTGCTGGCTGAAACGG TTTTTTATGTTGCTGTTGGGCGTGTACTTAGACGTAGATTTTTACTTGAC GGTGCAACGCCCGAGAATTTGTCATTTCTTGTTCTACTCTGGCGTTTGTC GGACACATTTCTGACCCTTGGCCCACCCACACTCTTCCTGTATGTTCTAA AAAAAGCCATCTTGGGTATTGTAATACCCGGCAAGCGACAACCCCCCCCA CCCACCCAACCTCTACAATCCCGAACCCCCAAGGTCTCCTCTACCACCGA GCCCCCCTTTATTCCCTTCTCACTTTCCGTCTGTTCCTTGTTCCATCTCT CCTCTTCCTCTTCTCCCCCTTGCCAGACTCATACGTGCACCGCTCTGGCC GAACCGGGAGGGCCGGCCGCCCCGGCGTGGCCGTAACGCTCTACGCGGAG AACGAGATCCGCGACATCCGCAAGATCGAGCAGGGGGTCGGGCAGGGCTT CCGCTTCGAGCGCGGCGCGGTCCCGTCGGCCGAGCAGGTCATGTCCCTCG CGGGCACGGTCGCCCGCGAGCAGATCAAGGGCGTGAGCGACGAGATGTTG GAGTTCTTCCGGGAGTCGGCGAAGGAGCTGCTCGAGGAGGAGGAGTCGGG GGTGAGGGTGGTGGCCGCGGTGGCCGGCGACTCGGTGGTGGCGTGCTGTG GATGAGTTTTTTTCGGACACGCCGAGTTTAGCTGCGCTCGCCGTACACGG GCGGCGTAAGTATCGTTATTCCACCCCGCTCGCTCTCGAGCACCCATGTC GTGTGCCATGTACAGCAACAAAGGCAATGTCCACAAGGTTTGCTTTTAAA ATGCTGGTGCTGTTCTTCCGCTCATGCCGTGCTTTTACCTCCTTCCGCAC ACCCGTGTGCACAGGATAAGGAGCTTCTGCTGGCCAAGTGCTTGGCGGCC ATCGCCCGCAAGACGCACGTTACGGTAAGGCTGCTTGAAGAATTATGTCG GCGGTAACGGTTTCTGGCTTGGAATCGCGAGTTTTCTTACGGTTTGAGGG GTCGGGCGGGAGGACCGCCGTGTTCATCAACGTGCAAAGGTGTGCCGGCC ATGATGCGTCCGAACGCATCGAGTGTGGAGCACATGTCTTGTTTCGAATC CCTTCTCGATGAACAGCTTTGGCGCGCCTCGGTTCTCAGTGCTGACTCAC ACGCTCCATTTTTTTTTTCCATGCCGTGGTGTAAAGACCGAGCGTGATCG GCCCTAAAAATGCGAAGCGGCCTGTTTTCTCCTCGCTTTCACTTCCACCG CCAGAGCAGCCCGCCGGCCTACATGTACGCCCATAGCACCTTTGGAAACT TGGCACAGATATTTCTGATATCCCCCCCCCCCCCCCCCCACACCTTCTGA CAACCTCACCGCCCCCCTTCGGAAACACACAATTCCAGAGGCGATCCATG CTGACGGGCGAGCCGGACAAAGTCACCGTGCAGATGGTCGCGCCCCGCCA GCTCACCTCGGGCGACGTGATGTTCGCGGTCGGCAAGCTGGGCAGGGCCG CGGGCTTCGAGCCGATGGTGGGCAAGATCGCCGTGGCGAAGGACCCCACG ACGGCGGTGTTCGACATGGCCACGGACGCGGCTGACCAGCTGATCAAGTT CAGCAAGGAGCAGAACCTGGAGAGTATCGAGTTCAGCATGTGCCCCGTGC TGCCCCTCTTACAGGAAGTGCCTGTGAGTTTTGTGTGTGTGTGTGTGTGT GTGTGTGTGTGTGTCTGTGTGTATTGTTTAAATTATCGTCGAACGCGCTC GCCGGTTGACGAATGAAATGACGCCAGCCTGGTGCGGGCCAAAAAACGTA AACAGCGTTTGGTATGTTTTGCGTGGTACATGCTGATGGTACATATTTGT GTTGCAAATTGTCAGCCGTTTACGGCGAACCCGTGGAACAAACCTCGGTC TTTCCAGGGGCAGACTCGGCTGTAACCCTCTCTCGCCGCCCCCCAGCCAC CATGATGTGTGTGTGTGTGTGTGTTTTCGTCCCATTTGCTTTGGCGACAG TCCCTTTCCGACCAAGGCGAGACGTGTACTACACGTTGCGGTGTATTTAG AGTACTACACTTGAATTTCTGTACAACTTGAACCAACCGGGGTCACAAAG GAGGGGGTAAACACTGGGGCTTTTTTCTTCTTCTTCTTCTGTTTGTTTTT TGCCCCACCTTCCTCCTGCGGTGCTTGCCTTGGATTTTATCGCGAGAAGG GTGCACAGCCATCCCTTTCCCTCGTCAACGTGCTAAGTCGAAGTTTGGTA CTCACGAGCTTTTTCAGCTATGTTATCGCTTTCACCTGCAAAGTCGCAAA AGAAACACCTTTGCTTGGAATTGAACTCCAGACTTTGCTGCTAGTGGGTT CGAGGTTAAACCACTAGGCCACCGGGGCGACCGGCTATAATGGTTCAAGG TTAAAATCCATAGTGTCTTTGTCCCCTTTTGGTAGAGCTTTGGGTGTGCG CAGAACATCTAGACCGGTCTATCGGGATCGGGATCGGACGCACTCTTTTC CGTACGTACCGCTGGGAATCGCCGAATCCTGCGTGCGTCGCTTTCTCCTG TATCTTCTCAAATCTTGAATGCCATTCCCGACGTCAACGTCAACCTCAAT CGCTATCGCAATCTGAACTGCTCACCCTTCAACATCGACATCAACAGGGA GGAGGTCGCTTCGGCGGCGGCGGACGCGGCGGTGGCCGCGGCGGGCGGGG AGGACGCGGTCGCGGCGGCGGCGGCTACCGGGGCGGGCGATCATCGTACG GCGGCGGCGGTGGAGGATCATACGGCGGTGGGGGCGGTTACCGTGGAGGC GGCGGAGGCGGTGGAGGATACCGTGGCGGCGGTGGTGGAGGATACCGCGG CGGGGGTGGCTCGTCGTACGGCGGGGGCGGTTCGTCGTACGGCGGCGGCG GTTCGTCGTACGGCGGCGGCGGTTCGTCGTACGGCGGCGGCGGCGGGCGA TCGTCATACGGTGGGGGTGGAGGGGGTTCTTACGGGGGTGGCGGGGGCAG CTACCGTGGGGGCGGGTCGCGCGGTGGGGGGGGGTCCTCGTACGGCGGGG GGGGCAACTCTGACTGGTAGACTAGTCTAGATGAGGAGTCGTGGCGTGGC ATGATACTGCTGTTTGGTTTTTGAGCGGTTCCAGCTTTTCTCGTATGCAG TGCCGTTGACTCTTCTCGCGCCTGTCTCTCTCGGACGATCAAGACAGGAC TTGTTGTCTGCCAATCACAGAAAACCGCGTGAAAAGCACGATCAGCCATC ACACGGAAGGGTGAGAGGCAGCTAGGGTTCTCAAGGAAAACATAGAAAAC TCCATTATCAAGGAAGAAGACGACACGGATCGGTCGGCAGATTGCCCTCT CTCCCTTTTTTGATCTGCGATCAATGTGGCAAGTCACCAGCCATCGATTC CCAAGATTACGTCCGCCCGGGTGACCGTGGTTGACGCCACCCGTCGAACA AGGATCTTCGATTGTACCGATTTCAAAGTTCCGCCGCAGTTTTTTCGACC AGTCACGTAACCGCGTGCCACAAATCCTTTTCTCGGCGGTTTTTGTTCCT TTTTCTTTCGTGTGTCGGAGAGTCTGGTCCAGCCGTGCTGACCACGATCA CGATGTTGTCCTACCTGCCGGGTGTTGGAGAGACGAGACAAGGCGAGCTC GCGTTGTGGGTATTCTGGCGCCTACGTACACATCCTTTTTCCATTCGTGC CCCTGGGTAGTTTTAGCATGGCGCTATGATGCGTGGGCGCAAGGCGGCAG CTTTGTTTCTCGTGCGTCCCGTGGATACATCTCCCATTTTTCGGAGTTTG ACGGTAGAGAGAGAGACGGACCGGCTGGTTGAGCCGGACTCGCGGGAGGG TAAGAGGGTTTGAGCGCCGTATTCCATCTTAAAAGTGAAACTTGGGTCTA CAGAGTACGTGCTTTTTTTTGTGTATTTTCTTGTTTGTTTTTGCCTTTTT TTTTCTTTGGGTCTGAGATTTGGTCGCCTCTCCCCGTCGGGCCGAGTCGC AACACTTTTGTCGTTTGATGATAACGCTCATGACCCATAAAAAATTTGTG CGCGGGAATGGTTGGTGTTGGGCATACGCGCACTTTTGAAGGGAGTGTTC TTTCATGTTTTTTTGTTTTTCCATGTTTTTGTTTTGTTTGTGAAGTCGGA AACGATGAGGCAATTTTTGCCCCCGCCCTCCCGCGCGGCGAAAGCCGTCC TATTAATAGCTTAATATGAGATGCTTAAGATGTGCGGATGCCTCCTTACT GTTGGCGTCTCCAGCATGCCGGTTGACTGCTGTTGGCCGTATGCCACTTA TCACGACAAGTCAGTCTTCTGTTGTTGTTTTATCTCGATCCACTGAGGCG CGGTTGAGTGCCCGGTACCCTGTTTTGCGGGCAGTCACATATGGCCAAAG CTCGCCTGAATCTTAAGAGAGATAGATCAGAAAGTCGTGTTCCGAGAAAT TGCTGCCTCTGCCACGGACGGCGTTCCAGGGGAATCTTCGGAAACTTGTT GAGAACTCTGCATGTATGTTACGTTTCGGGGTTGTTGACCGGCGCTTTCC GTGATGTCAACGATGACGTGGACTTGCTTGACGTGGACTAACCACGGTTC GACGGAGCTGGTGTCTGTAGAGAAGCCAAGCGAATAGAAACTGTTTTTCG ATCTGCGCGTACCTTTGGCTGCAGATGGCGTACATACAACACGGTCACCG CAGGAGGTAGGTGGAGACATCTCCTCCTGTGTGACCCCGGATGGTAGCCT AGCTAGTTGTAGTTTGTAGTGAAGAGGAGGAGGCAGGCTACGAAGAAACA TTGTCTAATGGGAGAGAAAATGAAAAAATATACATTGGTACTTGGGTATA TACTTCGAGGTGGGAGTATATATTATACCAAGTATGTATACTCCGTATAT GCCGGTCGTCCCGGTGGACTAGTGGTTTAACCTCGAACCCACTAGCAGCA AAGTCTGGAGTTCAATTCCAAGCAAAGGTGTTTCTTTTGCGACTTTGCAG GTGA
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Coding sequence (CDS) from alignment at C-linearis_contig104:515617..526370+

>mRNA_C-linearis_contig104.920.1 ID=mRNA_C-linearis_contig104.920.1|Name=mRNA_C-linearis_contig104.920.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=5610bp|location=Sequence derived from alignment at C-linearis_contig104:515617..526370+ (Chordaria linearis ClinC8C monoicous)
ATGACATCTCAACGCAGCACCACACTGGCCGTGCTCGGCCTCCTGGCCGG
CTTCGTCAACGTCGATGCGTTCCGCCTGATTCCCGCGTCGCCGGGAGCGG
TGTCCTCGTCGCTCGCCCGCGCGCAGCAGCAGTCAGCGGTGGCAAGTCGT
GGGGCTTCAACCCGGCGGACGTGGCGGTCAGCCCACGGGTTGACCATGAG
CTCGCCAGCTGTCGGGAACGACCTCCCCGCGACCGAGGAGCTCGAGGACA
AGCCCTCTCGGGACAGTGTCATGGACGAGCTTGATGCGATTCTGGGTGAC
GTGAAGATGATGACATCTCAACGCAGCACCACACTGGCCGTGCTCGGCCT
CCTGGCCGGCTTCGTCAACGTCGATGCGTTCCGCCTGATTCCCGCGTCGC
CGGGAGCGGTGTCCTCGTCGCTCGCCCGCGCGCAGCAGCAGTCAGCGGTG
GCAAGTCGTGGGGCTTCAACCCGGCGGACGTGGCGGTCAGCCCACGGGTT
GACCATGAGCTCGCCAGCTGTCGGGAACGACCTCCCCGCGACCGAGGAGC
TCGAGGACAAGCCCTCTCGGGACAGTGTCATGGACGAGCTTGATGCGATT
CTGGGTGACGTGAAGATGGACTCCACCGCAAAGCCCGCCTCTAGCGCCAA
GAACACCGCGGCTGTCCTCGGCCAGGACCTCGACTCCCTCCTCGGGGCCC
CCGGCGCGCCGCCTTCCGCAGCGGCAACGCCCGCAACGAAGCAAAACAGT
GACGTCGGCGACCTCAACCTGGATGACTTGCTCGGCCCGGGGGCCAACTC
CGCGCCGCCGCAGCGATATTCGGGCGGGGGCACCGCCGGCGGCGGCGGCG
CGGCCAGGGCACCCCCGGCGTCTCGCGCACAGCCGGCCCAGGGCTGGGGC
TCGCCGACGGATGGCCAGGCGCCGCCCCCGCAGCAGCGCATGTCGTACAG
CGGGGAGTTTGGCGCGGCCAGCGGCAGGTACGGGGACATGGCGACGGCGG
CGGCGAGCAAGGTGTTGAAGGGCGACCAGCTGGTCTCCTTGGTGGAGGTC
GGGGACGAGGGCGCGTGCCCTGTGGAGGAGAAGGACGTGGACCCCAAGAC
TGTGGCGGCGCTCAAGGCCCGCGGCATTGAGAACTTCACTCCTGTGCAGG
ACTCCACCGCAAAGCCCGCCTCTAGCGCCAAGAACACCGCGGCTGTCCTC
GGCCAGGACCTCGACTCCCTCCTCGGGGCCCCCGGCGCGCCGCCTTCCGC
AGCGGCAACGCCCGCAACGAAGCAAAACAGTGACGTCGGCGACCTCAACC
TGGATGACTTGCTCGGCCCGGGGGCCAACTCCGCGCCGCCGCAGCGATAT
TCGGGCGGGGGCACCGCCGGCGGCGGCGGCGCGGCCAGGGCACCCCCGGC
GTCTCGCGCACAGCCGGCCCAGGGCTGGGGCTCGCCGACGGATGGCCAGG
CGCCGCCCCCGCAGCAGCGCATGTCGTACAGCGGGGAGTTTGGCGCGGCC
AGCGGCAGGTACGGGGACATGGCGACGGCGGCGGCGAGCAAGGTGTTGAA
GGGCGACCAGCTGGTCTCCTTGGTGGAGGTCGGGGACGAGGGCGCGTGCC
CTGTGGAGGAGAAGGACGTGGACCCCAAGACTGTGGCGGCGCTCAAGGCC
CGCGGCATTGAGAACTTCACTCCTGTGCAGGCGATCACGTACGACCACGT
CCTGACCGGGCGCGATATCATCGGCAAGTCCCGCACCGGGACGGGCAAGA
CGATTGCCTTCGGCCTGCCGGTCATCCAGCACCTCGGCCGCTTCGCCGAA
GACCACAAGGAGCGCACCTACCAGCGCGGCAGGTCGCCGCGGTTCCTCGT
CGTGTGCCCGACGCGCGAGCTGGCCCGTCAGGCGATCACGTACGACCACG
TCCTGACCGGGCGCGATATCATCGGCAAGTCCCGCACCGGGACGGGCAAG
ACGATTGCCTTCGGCCTGCCGGTCATCCAGCACCTCGGCCGCTTCGCCGA
AGACCACAAGGAGCGCACCTACCAGCGCGGCAGGTCGCCGCGGTTCCTCG
TCGTGTGCCCGACGCGCGAGCTGGCCCGTCAGGTGTACACCGAGCTGGAC
ACCCTCGGAAGAGGCTTCGGGCTCAAGGCCGACGTGTTCCACGGCGGGTC
CGCCTACGGCCCCCAGATGAAGTCTCTTTCCGACGGCCTCGACATCCTCG
TCGCCACTCCCGGCCGCGTGATGGACCACCTGCAGAAGGGCGCCCTCTCC
CTCGCGGACGTGCGGCACGCCGTCCTGGACGAGGCGGACGAGATGCTCAA
CATGGGCTTCGCCGACGACATCGAGACCATTTTCTCCTACGTTAACGTGT
ACACCGAGCTGGACACCCTCGGAAGAGGCTTCGGGCTCAAGGCCGACGTG
TTCCACGGCGGGTCCGCCTACGGCCCCCAGATGAAGTCTCTTTCCGACGG
CCTCGACATCCTCGTCGCCACTCCCGGCCGCGTGATGGACCACCTGCAGA
AGGGCGCCCTCTCCCTCGCGGACGTGCGGCACGCCGTCCTGGACGAGGCG
GACGAGATGCTCAACATGGGCTTCGCCGACGACATCGAGACCATTTTCTC
CTACGTTAACGTCCAGGAGTGCCAGGTTCTCCTGTTCAGCGCCACCGTGC
CGAGCTGGGTGAGGAACATCGCCAACAAGTACACGGCCAACCCCCTCACC
GTTGACGCCGTCGGCAAGAACGTCCAGGAGTGCCAGGTTCTCCTGTTCAG
CGCCACCGTGCCGAGCTGGGTGAGGAACATCGCCAACAAGTACACGGCCA
ACCCCCTCACCGTTGACGCCGTCGGCAAGAACGTGAACAAGCTGGCCACG
ACCGTCAAGCACTTGTCCATCGAGGTTTCCGCGCGGCATCGTTCGAGCAT
GCTGGAGGACATCATCACCTACTACGGCAAGGGCTCTCACGCCATCGTCT
TCACGAACTCGAAGGCGGAGTGCGACGACCTCTCCGACGGCCAGACCTTC
AAGACGCTCACGTCTCAGGTGAACAAGCTGGCCACGACCGTCAAGCACTT
GTCCATCGAGGTTTCCGCGCGGCATCGTTCGAGCATGCTGGAGGACATCA
TCACCTACTACGGCAAGGGCTCTCACGCCATCGTCTTCACGAACTCGAAG
GCGGAGTGCGACGACCTCTCCGACGGCCAGACCTTCAAGACGCTCACGTC
TCAGGTGCTTCACGGAGACATCTCCCAGCACCAGCGTGACCAGACCATTA
AGGCGTTCCGCGCCAAGGGCTTTCAGGTCCTGGTGGCGACCGATGTTGCC
GCTCGCGGTATCGACGTGTCGGACATCGACCTGGTCGTCCAGTACCGCCC
TCCTCGCGACCCGGGTGCTTCACGGAGACATCTCCCAGCACCAGCGTGAC
CAGACCATTAAGGCGTTCCGCGCCAAGGGCTTTCAGGTCCTGGTGGCGAC
CGATGTTGCCGCTCGCGGTATCGACGTGTCGGACATCGACCTGGTCGTCC
AGTACCGCCCTCCTCGCGACCCGGACTCATACGTGCACCGCTCTGGCCGA
ACCGGGAGGGCCGGCCGCCCCGGCGTGGCCGTAACGCTCTACGCGGAGAA
CGAGATCCGCGACATCCGCAAGATCGAGCAGGGGGTCGGGCAGGGCTTCC
GCTTCGAGCGCGGCGCGGTCCCGTCGGCCGAGCAGGTCATGTCCCTCGCG
GGCACGGTCGCCCGCGAGCAGATCAAGGGCGTGAGCGACGAGATGTTGGA
GTTCTTCCGGGAGTCGGCGAAGGAGCTGCTCGAGGAGGAGGAGTCGGGGA
CTCATACGTGCACCGCTCTGGCCGAACCGGGAGGGCCGGCCGCCCCGGCG
TGGCCGTAACGCTCTACGCGGAGAACGAGATCCGCGACATCCGCAAGATC
GAGCAGGGGGTCGGGCAGGGCTTCCGCTTCGAGCGCGGCGCGGTCCCGTC
GGCCGAGCAGGTCATGTCCCTCGCGGGCACGGTCGCCCGCGAGCAGATCA
AGGGCGTGAGCGACGAGATGTTGGAGTTCTTCCGGGAGTCGGCGAAGGAG
CTGCTCGAGGAGGAGGAGTCGGGGGATAAGGAGCTTCTGCTGGCCAAGTG
CTTGGCGGCCATCGCCCGCAAGACGCACGTTACGGATAAGGAGCTTCTGC
TGGCCAAGTGCTTGGCGGCCATCGCCCGCAAGACGCACGTTACGAGGCGA
TCCATGCTGACGGGCGAGCCGGACAAAGTCACCGTGCAGATGGTCGCGCC
CCGCCAGCTCACCTCGGGCGACGTGATGTTCGCGGTCGGCAAGCTGGGCA
GGGCCGCGGGCTTCGAGCCGATGGTGGGCAAGATCGCCGTGGCGAAGGAC
CCCACGACGGCGGTGTTCGACATGGCCACGGACGCGGCTGACCAGCTGAT
CAAGTTCAGCAAGGAGCAGAACCTGGAGAGTATCGAGTTCAGCATGTGCC
CCGTGCTGCCCCTCTTACAGGAAGTGCCTAGGCGATCCATGCTGACGGGC
GAGCCGGACAAAGTCACCGTGCAGATGGTCGCGCCCCGCCAGCTCACCTC
GGGCGACGTGATGTTCGCGGTCGGCAAGCTGGGCAGGGCCGCGGGCTTCG
AGCCGATGGTGGGCAAGATCGCCGTGGCGAAGGACCCCACGACGGCGGTG
TTCGACATGGCCACGGACGCGGCTGACCAGCTGATCAAGTTCAGCAAGGA
GCAGAACCTGGAGAGTATCGAGTTCAGCATGTGCCCCGTGCTGCCCCTCT
TACAGGAAGTGCCTGGAGGAGGTCGCTTCGGCGGCGGCGGACGCGGCGGT
GGCCGCGGCGGGCGGGGAGGACGCGGTCGCGGCGGCGGCGGCTACCGGGG
CGGGCGATCATCGTACGGCGGCGGCGGTGGAGGATCATACGGCGGTGGGG
GCGGTTACCGTGGAGGCGGCGGAGGCGGTGGAGGATACCGTGGCGGCGGT
GGTGGAGGATACCGCGGCGGGGGTGGCTCGTCGTACGGCGGGGGCGGTTC
GTCGTACGGCGGCGGCGGTTCGTCGTACGGCGGCGGCGGTTCGTCGTACG
GCGGCGGCGGCGGGCGATCGTCATACGGTGGGGGTGGAGGGGGTTCTTAC
GGGGGTGGCGGGGGCAGCTACCGTGGGGGCGGGTCGCGCGGTGGGGGGGG
GTCCTCGTACGGCGGGGGGGGCAACTCTGACTGGTAGGGAGGAGGTCGCT
TCGGCGGCGGCGGACGCGGCGGTGGCCGCGGCGGGCGGGGAGGACGCGGT
CGCGGCGGCGGCGGCTACCGGGGCGGGCGATCATCGTACGGCGGCGGCGG
TGGAGGATCATACGGCGGTGGGGGCGGTTACCGTGGAGGCGGCGGAGGCG
GTGGAGGATACCGTGGCGGCGGTGGTGGAGGATACCGCGGCGGGGGTGGC
TCGTCGTACGGCGGGGGCGGTTCGTCGTACGGCGGCGGCGGTTCGTCGTA
CGGCGGCGGCGGTTCGTCGTACGGCGGCGGCGGCGGGCGATCGTCATACG
GTGGGGGTGGAGGGGGTTCTTACGGGGGTGGCGGGGGCAGCTACCGTGGG
GGCGGGTCGCGCGGTGGGGGGGGGTCCTCGTACGGCGGGGGGGGCAACTC
TGACTGGTAG
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