prot_C-linearis_contig103.850.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig103.850.1
Unique Nameprot_C-linearis_contig103.850.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length685
Homology
BLAST of mRNA_C-linearis_contig103.850.1 vs. uniprot
Match: A0A6H5JYL2_9PHAE (FYVE-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYL2_9PHAE)

HSP 1 Score: 527 bits (1358), Expect = 4.340e-162
Identity = 334/703 (47.51%), Postives = 395/703 (56.19%), Query Frame = 0
Query:    1 MHQRVRGDPGFSYLLSTTDPSRPPSSPTLLPLAAQYTVRIT-HALAKTGGXXXXXXXXXXXXXXXXXXXXRTTVTLGGVWANWNPETVAALSIFAYGMYGNSATVGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAGEVSPPSEAGEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPPAEAGERGGVVVVEVKRLSLWLNKEVHGRRLVLLEAGESTVEIVKYQHPEGSVSNYSLGFSSPALTDLGTRDSRWRSLVSPSLNSGLPAQQVRLNVVQDSRRGVEFPLTVRLVLQSCAVNYLNQTWLEALDYVMNGVLGDGPWCPWLL--DTEGGCSVDGKAFQPPPPVLRKKRLLIEAVDAEVKLPAGHVGAGWVAIEAKHLTA-----------------NNSYEVRRMGDAPAAPLELCQVWSVKLSGVDIHSSRCPRHTQAATSAAPRSSRSSTTSTSPGVPRSAVPQAGSRLLREGGASPGDVTVEAWWPVVPRVGDPKFDGVVSNYMVVGRAPGLDLTLHELDFSVLWQ---VLGDNVSGPVPVTADSLFAEASFSSMVDHPEGEKKKATTNRNNAEERVDT---GAAETI--AIKGIAPPAGGKGGRR--QLAVFPYEHPSPIATTFDVTFHLPDVGLVAHA 673
            MHQRV GD GFSYLLS+ DPS   S P LLP   +  +RIT H LA+                       RT V LGGVW NWNPETV AL++F YGMYGNS   G A                                      +A    P     EA                                                                           AE G+RGGV++ +VKR+SLWLNKEVHGRRL+LLEA ES+ EI KY H +GSVSNYS+   S +LT+LGT+ SRWRSLV PSL+S LP Q+VRL+++QDSR+GVEFP++V LVLQSC VNYLNQTWLE LDY+MNGVLGDGPWCPWLL   +E   SV  +       VL+KK L I+A+DAEV+LPAGH G+ WV  +AK LTA                 +NSY  RRMGD  +A  E CQVWS+ L GV I SSR  R + AA + AP SSR ST      VP    P+AGS+LLR+ G S G+VTV+AWWPVVPRVG  + DGV SNY+VVGRAPGLDL LHE DFSVLWQ   VL +N+SGPVP  ADSLFA +  +      + +  +   + N A + VDT   G ++T   A  G    A G+ GRR  QLAVFPYEHPS IATTFD+TFHLPDV LVAHA
Sbjct:  716 MHQRVTGDAGFSYLLSSQDPSSSASLPLLLP--EEEALRITYHTLAEKRAGDGGSGS-------------RTVVVLGGVWGNWNPETVGALAVFTYGMYGNSGGGGTAPETGDGGGEGGRPNAEEGKVENNSGRGVPSPRSEGLPSSARGSIPEQAEVEAGKRAERTGAAEPAS-------------------------------------------------------------AETGKRGGVIIAKVKRVSLWLNKEVHGRRLLLLEARESSAEIFKYHHSDGSVSNYSIALGSASLTNLGTKHSRWRSLVCPSLDSTLPPQEVRLDIIQDSRQGVEFPISVNLVLQSCTVNYLNQTWLETLDYLMNGVLGDGPWCPWLLIPQSEDDRSVHERVLPXXXXVLKKKSLRIKALDAEVRLPAGHAGSSWVTFDAKTLTATNRVAHHAPNDARLAGRSNSYGTRRMGDISSAKPETCQVWSIALDGVGIRSSRLYRPSPAA-AVAPSSSRGSTV-----VP----PRAGSKLLRDDGVSLGEVTVDAWWPVVPRVGGAESDGVTSNYVVVGRAPGLDLGLHEDDFSVLWQGCEVLAENISGPVPEAADSLFASSGLAVGPWRAKADDNELGISTNEATDLVDTAGEGKSDTANNARGGHTSAAVGRTGRRRRQLAVFPYEHPSDIATTFDITFHLPDVALVAHA 1332          
BLAST of mRNA_C-linearis_contig103.850.1 vs. uniprot
Match: D7FMF5_ECTSI (FYVE-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMF5_ECTSI)

HSP 1 Score: 488 bits (1257), Expect = 1.310e-148
Identity = 323/685 (47.15%), Postives = 368/685 (53.72%), Query Frame = 0
Query:    1 MHQRVRGDPGFSYLLSTTDPSRPPSSPTLLPLAAQYTVRIT-HALA--KTGGXXXXXXXXXXXXXXXXXXXXRTTVTLGGVWANWNPETVAALSIFAYGMYGNSATVGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAGEVSPPSEAGEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPPAEAGERGGVVVVEVKRLSLWLNKEVHGRRLVLLEAGESTVEIVKYQHPEGSVSNYSLGFSSPALTDLGTRDSRWRSLVSPSLNSGLPAQQVRLNVVQDSRRGVEFPLTVRLVLQSCAVNYLNQTWLEALDYVMNGVLGDGPWCPWLL--DTEGGCSVDGKAFQPPPPVLRKKRLLIEAVDAEVKLPAGHVGAGWVAIEAKHLTANNSYEVRRMGDAPAAPLELCQVWSVKLSGVDIHSSRCPRHTQAATSAAPRSSRSSTTSTSPGVPRSAVPQAGSRLLREGGASPGDVTVEAWWPVVPRVGDPKFDGVVSNYMVVGRAPGLDLTLHELDFSVLWQVLGDNVSGPVPVTADSLFAEAS-----FSSMVDHPE--GEKKKATTNRNNAEERVDTGAAETIAIKGIAPPAGGKGGRRQLAVFPYEHPSPIATTFDVTFHLPDVGLVAHA 673
            MHQR+ GD GFSYLLS+ DPS     P LLP   +  +RIT H L   +TGG                    RT V LGGVW NWNPETV ALS+F YGMYG+S   G A     XXXXXX                           +A   S P +AG                                                                             AE G RGG ++V+                           EI K  H EGSVSNYS+     +LTDLGT+ SRWRSLV PSL+S LP Q+VRL++VQDSR+GVEFP++V LVLQSC VNYLNQTWLE LDY+MNGVLGDGPWCPWLL    E   SVD +   PPPP L KK L I+A DAEV+LPAGH GA WV  +AK LTA NSY  RRMGD P+A  E CQVWS+ L G+ I SSRC R + AA + AP  S  ST      VP    P+AGS+LLRE G S G+VTVEAWWP+VPRVG  + DGV SNY+VVGRAPGLDL LHE DFSVLWQVL +N+ GPVP   DSLFA +      +S+ VD  E      +AT   N A E     A         A  +     RRQLAVFPYEHPS IATTFDVTFHLPDV LVAHA
Sbjct: 1439 MHQRLTGDAGFSYLLSSQDPSSSAPLPLLLP--EEEALRITYHTLGEKRTGGDRSGS---------------RTVVVLGGVWGNWNPETVGALSVFTYGMYGSSGGGGTAPEIGDXXXXXXRPNAEQGKVDERSGRGVPSPRSEDLPSSASGRSIPEQAGVQAETQAERTGAAEPVS------------------------------------------------------------AEKGRRGGAIIVKA--------------------------EIFKCHHSEGSVSNYSIALGFASLTDLGTKHSRWRSLVCPSLDSTLPPQEVRLDIVQDSRQGVEFPISVNLVLQSCTVNYLNQTWLETLDYLMNGVLGDGPWCPWLLIPQPEDEHSVDERVLPPPPPALNKKSLRIKAFDAEVRLPAGHAGASWVTFDAKTLTATNSYGTRRMGDVPSAKPETCQVWSINLDGLGIRSSRCYRPSPAA-AVAPSPSLGSTV-----VP----PRAGSKLLREDGVSLGEVTVEAWWPMVPRVGGAESDGVTSNYVVVGRAPGLDLGLHEDDFSVLWQVLAENICGPVPEVVDSLFASSGLAVGPWSAKVDDGEHGSSTNEATDLVNTAWEGKPDKADNARGEHTSAAVSRTGRRRRQLAVFPYEHPSDIATTFDVTFHLPDVALVAHA 2010          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig103.850.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JYL2_9PHAE4.340e-16247.51FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FMF5_ECTSI1.310e-14847.15FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig103contigC-linearis_contig103:471143..476450 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig103.850.1mRNA_C-linearis_contig103.850.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig103 471143..477035 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig103.850.1 ID=prot_C-linearis_contig103.850.1|Name=mRNA_C-linearis_contig103.850.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=685bp
MHQRVRGDPGFSYLLSTTDPSRPPSSPTLLPLAAQYTVRITHALAKTGGG
GGGGSSGRGNSGSSSRSESRTTVTLGGVWANWNPETVAALSIFAYGMYGN
SATVGGAGAGAGSGESGIGEPLPRGDAEAENKNSEANRSASASAGAAGEV
SPPSEAGEAAATAATPSSFEGGGIPEATSETGKAAAAAPSGTTRMGSAGG
ERGTVTGTAKPSGGNAGGVAAEEEGQGGGAKLPPAEAGERGGVVVVEVKR
LSLWLNKEVHGRRLVLLEAGESTVEIVKYQHPEGSVSNYSLGFSSPALTD
LGTRDSRWRSLVSPSLNSGLPAQQVRLNVVQDSRRGVEFPLTVRLVLQSC
AVNYLNQTWLEALDYVMNGVLGDGPWCPWLLDTEGGCSVDGKAFQPPPPV
LRKKRLLIEAVDAEVKLPAGHVGAGWVAIEAKHLTANNSYEVRRMGDAPA
APLELCQVWSVKLSGVDIHSSRCPRHTQAATSAAPRSSRSSTTSTSPGVP
RSAVPQAGSRLLREGGASPGDVTVEAWWPVVPRVGDPKFDGVVSNYMVVG
RAPGLDLTLHELDFSVLWQVLGDNVSGPVPVTADSLFAEASFSSMVDHPE
GEKKKATTNRNNAEERVDTGAAETIAIKGIAPPAGGKGGRRQLAVFPYEH
PSPIATTFDVTFHLPDVGLVAHADHWDPAASAAAP
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