mRNA_C-linearis_contig103.829.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig103.829.1
Unique NamemRNA_C-linearis_contig103.829.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
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BLAST of mRNA_C-linearis_contig103.829.1 vs. uniprot
Match: D7G450_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G450_ECTSI)

HSP 1 Score: 211 bits (538), Expect = 1.030e-58
Identity = 119/198 (60.10%), Postives = 138/198 (69.70%), Query Frame = 2 
Query:  581 CVCVLPSENAPVLPKLDKRLLPAFGALCAADPELRRMYPVVAGVAVKAMLEAKTMRGLFQLAEEVRVDVDTCTSKDAVVQALLASGKSLVPGPAVQGRAL-----PGP------QAAPALVHDATTDRAALVGLFNDTGGASRKNSAGWGTPAPLGEWYGVTMDGVGRFLSLALGENNLDGPIPSAPGNLTPLEYLTL 1141
            CV  LP E+ PVL  LDKRLLPAFGALC+A+PELRRMY  VAGVAV+AMLE +TM+GLFQLAEEV VDVD CTSK++V+QALLASGK L+P  A  G+A+     P P      +A PA V DA TDR  L+ LFN T G S   S  WGT + LGEWYGVT++  GR   L L +NNL GPIP + G LT L  L L
Sbjct:  191 CVRALPPESVPVLSNLDKRLLPAFGALCSAEPELRRMYHTVAGVAVRAMLEQQTMKGLFQLAEEVDVDVDACTSKESVIQALLASGKCLLPSGATSGQAVIKSNPPVPTRVSPVKAMPAPVRDARTDRTVLMELFNTTKGPSWTTSTAWGTSSSLGEWYGVTVNAEGRVTKLDLEKNNLTGPIPPSLGGLTALLLLRL 388
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BLAST of mRNA_C-linearis_contig103.829.1 vs. uniprot
Match: A0A6H5JWQ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWQ1_9PHAE)

HSP 1 Score: 177 bits (450), Expect = 1.720e-48
Identity = 95/168 (56.55%), Postives = 117/168 (69.64%), Query Frame = 2 
Query:  581 CVCVLPSENAPVLPKLDKRLLPAFGALCAADPELRRMYPVVAGVAVKAMLEAKTMRGLFQLAEEVRVDVDTCTSKDAVVQALLASGKSLVPGPAVQGRALPGPQAAPALVHDATTDRAALVGLFNDTGGASRKNSAGWGTPAPLGEWYGVTMDGVGRFLSLALGENNL 1084
            CV  LP E+APVL  LD+R+LPAF ALC+A+PELR MYP VAG  V AMLE KT+R LF LA+ V VDV++CTS +A+VQ LL+SGK+L+PG                 V +ATTDR+AL+ LFN T G+S  N  GWGT APL +W+GVT+DG GR  +L LG N L
Sbjct:   54 CVLALPPESAPVLSNLDERILPAFCALCSAEPELRYMYPKVAGAVVGAMLEQKTIRDLFHLADTVGVDVESCTSHEAMVQVLLSSGKALLPGS----------------VPNATTDRSALMELFNATKGSSWTNKTGWGTSAPLQQWHGVTVDGAGRVTTLKLGWNKL 205
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BLAST of mRNA_C-linearis_contig103.829.1 vs. uniprot
Match: A0A6H5K720_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K720_9PHAE)

HSP 1 Score: 183 bits (464), Expect = 3.160e-47
Identity = 107/219 (48.86%), Postives = 124/219 (56.62%), Query Frame = 2 
Query:  581 CVCVLPSENAPVLPKLDKRLLPAFGALCAADPELRRMYPVVAGVAVKAMLEAKTMRGLFQLAEEVRVDVDTCTSKDAVVQALLASGKSLVPGPAVQGRALPGPQAAPAL-------------------------------VHDATTDRAALVGLFNDTGGASRKNSAGWGTPAPLGEWYGVTMDGVGRFLSLALGENNLDGPIPSAPGNLTPLEYLTLY 1144
            CVC LP    PVLP LDKRLLPAFG LCA +PE+ RMYP V GVA +A+L  +TMR LF+LA+EV VDV  CTSKD V+Q LLASGK+L   PA   +A+   Q    L                                 DA+TDRAAL+ LF  T G S K    WGT APLGEWYGVT+D  GR   L LG+N L G +P     LT L  L L+
Sbjct:  292 CVCALPPVAEPVLPDLDKRLLPAFGTLCATEPEIYRMYPEVGGVAARALLAIQTMRDLFELADEVDVDVAKCTSKDEVIQILLASGKALFRAPATGVKAMLEGQTVSDLWLLARENDVDMDRCKPLVIKILLGSGKDLKPTRDASTDRAALLALFIATNGPSWKKGTAWGTSAPLGEWYGVTVDDDGRVSQLELGDNGLSGALPPELARLTALTVLDLH 510
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BLAST of mRNA_C-linearis_contig103.829.1 vs. uniprot
Match: D8LD84_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD84_ECTSI)

HSP 1 Score: 172 bits (437), Expect = 8.170e-43
Identity = 105/218 (48.17%), Postives = 119/218 (54.59%), Query Frame = 2 
Query:  581 CVCVLPSENAPVLPKLDKRLLPAFGALCAADPELRRMYPVVAGVAVKAMLEAKTMRGLFQLAEEVRVDVDTCTSKDAVVQALLASGKSLVPGPAVQGRALPGPQAAPAL-------------------------------VHDATTDRAALVGLFNDTGGASRKNSAGWGTPAPLGEWYGVTMDGVGRFLSLALGENNLDGPIPSAPGNLTPLEYLTL 1141
            CVC LP    PVLP LDKRLLPAFG LCA +P + RMYP + GVA +A+L ++TMR LF+LA+EV VDV  CTSKD V+Q LL SGK+L   PA    A    Q    L                                 DA+TDRAAL+ LF  T G S   S  WGT APLGEWYGVT+D  GR   L L EN L G IP     LT L  L L
Sbjct:  404 CVCALPPVAEPVLPDLDKRLLPAFGTLCATEPGIYRMYPEIGGVAARALLASQTMRDLFELADEVDVDVARCTSKDEVIQILLGSGKALFRAPATGVEAKLESQTMLDLCQLAREKDVDIDRYKTHVIKILLGSGKDLNPTRDASTDRAALLALFIATNGPSWTTSTAWGTAAPLGEWYGVTVDDDGRVSQLELRENGLSGVIPPEFARLTALTKLNL 621
[Close]
BLAST of mRNA_C-linearis_contig103.829.1 vs. uniprot
Match: A0A6H5KAT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAT8_9PHAE)

HSP 1 Score: 167 bits (422), Expect = 4.530e-42
Identity = 97/197 (49.24%), Postives = 118/197 (59.90%), Query Frame = 2 
Query:  581 CVCVLPSENAPVLPKLDKRLLPAFGALCAADPELRRMYPVVAGVAVKAMLEAKTMRGLFQLAEEVRVDVDTCTSKDAVVQALLASGKSLVPGPAVQGRALPGPQAAPALVHDATTDRAALVGLFNDTGGASRKNSA---------------------------GWGTPAPLGEWYGVTMDGVGRFLSLALGENNLDG 1090
            CV VLP E+A VL  LD+R+LPAF ALC+A+PELR MYP VAG  V AMLE KTMR LF LA+ V VDV++CTS +A+VQ LL+SGK+L+PGP                V +ATTDR+AL+ LFN T G+S  N                             GWGT  PL +W+GVT+DG GR  +L L  NNL G
Sbjct:  167 CVLVLPPESASVLSNLDERILPAFCALCSAEPELRCMYPKVAGAVVGAMLEQKTMRDLFHLADMVGVDVESCTSHEAMVQVLLSSGKALLPGP----------------VPNATTDRSALMELFNATNGSSWTNKTXXXXXXXXXXXXXXXXXXXXXXXXXXXGWGTSTPLQQWHGVTVDGAGRVTTLDLSGNNLSG 347
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BLAST of mRNA_C-linearis_contig103.829.1 vs. uniprot
Match: A0A6H5K3B9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3B9_9PHAE)

HSP 1 Score: 149 bits (375), Expect = 8.330e-36
Identity = 90/179 (50.28%), Postives = 105/179 (58.66%), Query Frame = 2 
Query:  581 CVCVLPSENAPVLPKLDKRLLPAFGALCAADPELRRMYPVVAGVAVKAMLEAKTMRGLFQLAEEVRVDVDTCTSKDAVVQALLASGKSLVPGPAVQGRA---------LP-GPQAAPALVH--------DATTDRAALVGLFNDTGGASRK-------------NSAGWGTPAPLGEWY 1024
            CVCVLP EN PVLP+LD RLLPAFGALCA++PELRR+YP V G AVKAMLE KTM+ LF+LA EV  DV  CTSKD V++ L  S + LVP  A   +          LP G   APA+V           +TD  AL+ L+  T G   K             N  GWGT APLG+WY
Sbjct:  231 CVCVLPPENVPVLPELDSRLLPAFGALCASEPELRRLYPDVGGAAVKAMLEEKTMQSLFELATEVGADVTACTSKDGVIEILSTSERDLVPTQATACKGVVEEVVRTPLPSGKGPAPAVVAPIPAPPVGSTSTDMGALMALYFQTNGPPEKKGRLWAAAKGGWRNRRGWGTFAPLGDWY 409
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BLAST of mRNA_C-linearis_contig103.829.1 vs. uniprot
Match: A0A6H5KIE6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIE6_9PHAE)

HSP 1 Score: 118 bits (295), Expect = 2.150e-27
Identity = 66/107 (61.68%), Postives = 82/107 (76.64%), Query Frame = 1 
Query:   55 DFRAGLGGIGAAAAAEIAEVCSEVRGVERDLASVRPSVEECRAENMELFESFAGSLEAAQHGIEIMRSSPLKEAEEVFLKDFEASNGDVEFLKDARSKVMTALVQGH 375
            D R+GLG IG A  AE   + ++VR V+RDLASVR SVE+CRAENM  F SF   LEAA+ GIE+MR++PL+EA+ + LK+FEAS G+V FL+ A SK MTALVQGH
Sbjct:    5 DHRSGLGAIGTAVMAEATGIHADVREVKRDLASVRESVEDCRAENMVFFASFTAGLEAARQGIELMRNAPLEEAQ-MALKNFEASKGNVRFLETAHSKAMTALVQGH 110
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BLAST of mRNA_C-linearis_contig103.829.1 vs. uniprot
Match: A0A6H5KPC4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPC4_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 3.200e-14
Identity = 44/71 (61.97%), Postives = 51/71 (71.83%), Query Frame = 1 
Query:   34 GLANLGSDFRAGLGGIGAAAAAEIAEVCSEVRGVERDLASVRPSVEECRAENMELFESFAGSLEAAQHGIE 246
            GLA LG D R+GLG IG A  AE   + ++VR V+RDLASVR SVE+CRAENM  F SF   LEAA+ GIE
Sbjct:   21 GLATLGRDLRSGLGAIGTAVMAEATGIHADVREVKRDLASVRESVEDCRAENMVFFASFTAGLEAARQGIE 91
[Close]
BLAST of mRNA_C-linearis_contig103.829.1 vs. uniprot
Match: A0A6H5K3D6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3D6_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 4.260e-14
Identity = 40/74 (54.05%), Postives = 49/74 (66.22%), Query Frame = 2 
Query:  920 TTDRAALVGLFNDTGGASRKNSAGWGTPAPLGEWYGVTMDGVGRFLSLALGENNLDGPIPSAPGNLTPLEYLTL 1141
            +TDRAALV LFN TGGA+ K +  W T APLG+WYGV ++  GR + L+L  NNL G IP   G+L  L  L L
Sbjct:   10 STDRAALVALFNATGGANWKKNTKWNTDAPLGQWYGVEVNDAGRVVKLSLRYNNLKGHIPRQLGDLGALMTLNL 83
[Close]
BLAST of mRNA_C-linearis_contig103.829.1 vs. uniprot
Match: A0A7X4J6B9_9BACT (BIG2 domain-containing protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7X4J6B9_9BACT)

HSP 1 Score: 74.3 bits (181), Expect = 4.230e-10
Identity = 41/91 (45.05%), Postives = 52/91 (57.14%), Query Frame = 2 
Query:  902 ALVHDATTDRAALVGLFNDTGGASRKNSAGWGTPAPLGEWYGVTMDGVGRFLSLALG----------ENNLDGPIPSAPGNLTPLEYLTLY 1144
            A    A+TDRAALV L+  TGG +  NS  W T APLGEW+GVT +  GR ++L +           +NN+ GPIP   GNL  LE +  Y
Sbjct:  132 AATDSASTDRAALVALYEATGGPNWLNSNNWLTDAPLGEWFGVTTNHEGRVVALEMTYYDWDTGQWIDNNISGPIPPELGNLANLERMQFY 222
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig103.829.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G450_ECTSI1.030e-5860.10Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5JWQ1_9PHAE1.720e-4856.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K720_9PHAE3.160e-4748.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LD84_ECTSI8.170e-4348.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KAT8_9PHAE4.530e-4249.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K3B9_9PHAE8.330e-3650.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KIE6_9PHAE2.150e-2761.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KPC4_9PHAE3.200e-1461.97Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5K3D6_9PHAE4.260e-1454.05Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A7X4J6B9_9BACT4.230e-1045.05BIG2 domain-containing protein n=1 Tax=Gemmatimona... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig103contigC-linearis_contig103:195418..200436 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score155.2
Seed ortholog evalue3.6e-35
Seed eggNOG ortholog2880.D7G450
Hectar predicted targeting categoryother localisation
EggNOG free text desc.regulation of response to stimulus
EggNOG OGsCOG4886@1,KOG0619@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size1711
Cds size675
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig103.829.1prot_C-linearis_contig103.829.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig103 196680..200088 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927376.2335346-UTR-C-linearis_contig103:195417..1956721622927376.2335346-UTR-C-linearis_contig103:195417..195672Chordaria linearis ClinC8C monoicousUTRC-linearis_contig103 195418..195672 +
1690879663.2340746-UTR-C-linearis_contig103:195417..1956721690879663.2340746-UTR-C-linearis_contig103:195417..195672Chordaria linearis ClinC8C monoicousUTRC-linearis_contig103 195418..195672 +
1622927376.2432752-UTR-C-linearis_contig103:195977..1961501622927376.2432752-UTR-C-linearis_contig103:195977..196150Chordaria linearis ClinC8C monoicousUTRC-linearis_contig103 195978..196150 +
1690879663.249577-UTR-C-linearis_contig103:195977..1961501690879663.249577-UTR-C-linearis_contig103:195977..196150Chordaria linearis ClinC8C monoicousUTRC-linearis_contig103 195978..196150 +
1622927376.255259-UTR-C-linearis_contig103:196419..1966791622927376.255259-UTR-C-linearis_contig103:196419..196679Chordaria linearis ClinC8C monoicousUTRC-linearis_contig103 196420..196679 +
1690879663.2675412-UTR-C-linearis_contig103:196419..1966791690879663.2675412-UTR-C-linearis_contig103:196419..196679Chordaria linearis ClinC8C monoicousUTRC-linearis_contig103 196420..196679 +
1622927376.3110793-UTR-C-linearis_contig103:200088..2004361622927376.3110793-UTR-C-linearis_contig103:200088..200436Chordaria linearis ClinC8C monoicousUTRC-linearis_contig103 200089..200436 +
1690879663.3108833-UTR-C-linearis_contig103:200088..2004361690879663.3108833-UTR-C-linearis_contig103:200088..200436Chordaria linearis ClinC8C monoicousUTRC-linearis_contig103 200089..200436 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927376.2691982-CDS-C-linearis_contig103:196679..1970791622927376.2691982-CDS-C-linearis_contig103:196679..197079Chordaria linearis ClinC8C monoicousCDSC-linearis_contig103 196680..197079 +
1690879663.2758057-CDS-C-linearis_contig103:196679..1970791690879663.2758057-CDS-C-linearis_contig103:196679..197079Chordaria linearis ClinC8C monoicousCDSC-linearis_contig103 196680..197079 +
1622927376.2807837-CDS-C-linearis_contig103:197606..1976781622927376.2807837-CDS-C-linearis_contig103:197606..197678Chordaria linearis ClinC8C monoicousCDSC-linearis_contig103 197607..197678 +
1690879663.2846146-CDS-C-linearis_contig103:197606..1976781690879663.2846146-CDS-C-linearis_contig103:197606..197678Chordaria linearis ClinC8C monoicousCDSC-linearis_contig103 197607..197678 +
1622927376.290727-CDS-C-linearis_contig103:198402..1984871622927376.290727-CDS-C-linearis_contig103:198402..198487Chordaria linearis ClinC8C monoicousCDSC-linearis_contig103 198403..198487 +
1690879663.293849-CDS-C-linearis_contig103:198402..1984871690879663.293849-CDS-C-linearis_contig103:198402..198487Chordaria linearis ClinC8C monoicousCDSC-linearis_contig103 198403..198487 +
1622927376.2996345-CDS-C-linearis_contig103:199970..2000881622927376.2996345-CDS-C-linearis_contig103:199970..200088Chordaria linearis ClinC8C monoicousCDSC-linearis_contig103 199971..200088 +
1690879663.3017292-CDS-C-linearis_contig103:199970..2000881690879663.3017292-CDS-C-linearis_contig103:199970..200088Chordaria linearis ClinC8C monoicousCDSC-linearis_contig103 199971..200088 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig103.829.1

>prot_C-linearis_contig103.829.1 ID=prot_C-linearis_contig103.829.1|Name=mRNA_C-linearis_contig103.829.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=225bp
MYPVVAGVAVKAMLEAKTMRGLFQLAEEVRVDVDTCTSKDAVVQALLASG
KSLVPGPAVQGRALPGPQAAPALVHDATTDRAALVGLFNDTGGASRKNSA
GWGTPAPLGEWYGVTMDGVGRFLSLALGENNLDGPIPSAPGNLTPLEYLT
LYKNQLTGPIPPALGRLAAMQMLCLSANQFSGERFREQGGRSADAPQLQR
GVLLIALQEVAVLPGFMLCSKYAA*
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mRNA from alignment at C-linearis_contig103:195418..200436+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig103.829.1 ID=mRNA_C-linearis_contig103.829.1|Name=mRNA_C-linearis_contig103.829.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=5019bp|location=Sequence derived from alignment at C-linearis_contig103:195418..200436+ (Chordaria linearis ClinC8C monoicous)
GCTCGGCAACGCTCCATGCCCCACATGAGGGGTGGTCTGGCCAACTTAGG
CAGCGACTTTCGAGCGGGCTTGGGGGGCATCGGTGCGGCTGCCGCGGCTG
AGATCGCCGAGGTTTGTTCTGAAGTCCGCGGGGTCGAGCGCGACCTAGCG
AGTGTCCGCCCAAGCGTGGAAGAGTGCCGTGCCGAGAACATGGAGCTTTT
CGAGAGCTTTGCTGGCAGCTTGGAAGCTGCCCAGCACGGCATCGAGATCA
TGAGGGTATGTGTAATTGCGGAGGCCGTTTGAAGATTGTGTGCGTTGAGC
ATGCTGCATCGTACTTCTGTCTTATCACCGCTGGATACTCCGATGTTCAT
CATCTACGGCAAACACCGGTACAAACTACGACGTTTTGTCGGTTCTACCC
ACGATCGTTGCATGGTCGATCAAGTTGACGTCTGCTCCTTTTGTCGTTGG
TGTGGTGCATGTTAGCACGTGACCTCAGCTGTCTCTGTGGTACTCAAGTG
CACACCCCGAAGCTCCTAACCTCGCGAACCCCCTTTGTTATCTCTGTCCA
ACCTTCCTAGAGTTCCCCACTGAAAGAGGCAGAAGAAGTGTTCCTGAAGG
ACTTCGAGGCCAGCAACGGGGATGTGGAATTCCTTAAGGATGCGCGCAGC
AAGGTGATGACCGCTTTAGTCCAAGGCCACACTCCCTTGACGTCAAGCTC
AGCGCAGCAATAATCGCCGTTTCAGCTGGGTATGTCTACAAGAGCAAGGC
GATTTGAGCGCGGTGCCCTTTCCGCGTCCATGAACCTCACTCCTTGATAT
GTAGTGCTTGGCTTCAACTGGGCCTAGAGAACATTATAACGACTCTTATT
CTGAATTAGATGTGGAGTCGCAAGAGAGGCGTCGCTGTGGGCCCAACAAT
GTTTCGGTTTTTCGTGCCTCTACATGTGCACCATTTTGGTTGCAGCGTGC
CCTGTCATTCACATATCCCTTTCCGCTCGTCGTTCCCGTCTGCTCGTACC
AGATTGACTCCCCGAGGGACGCAAAGAGCTTCACGGTGGACGGAACGCTA
TCAAACATCATCCGGCATCTTGCTCCTACCTGGGCTGACCCCTCTGCTAC
TGCCACGGCCGGTGGGAGGAAGGTCTTGTCGTTCCTGCTAAACCTCGTGG
TCTCTGTGTGTGCGTGCTTCCGTCAGAGAACGCGCCGGTACTACCCAAGC
TCGATAAGCGTCTCCTCCCAGCCTTTGGTGCCCTTTGCGCAGCTGATCCA
GAGCTGCGCCGCATGTACCCTGTTGTGGCCGGCGTCGCTGTGAAGGCGAT
GCTTGAGGCCAAGACGATGAGGGGTCTGTTCCAGTTGGCCGAAGAGGTAC
GTGTGGACGTCGACACCTGCACAAGCAAAGATGCGGTAGTCCAGGCTCTG
CTGGCTTCCGGCAAAAGCCTCGTGCCTGGCCCAGCGGTGCAAGGTAGGGC
GCTACCTGGACCACAGGCTGCGCCGGCACTAGTTCATGACGCGACGACGG
ACCGTGCCGCGCTGGTGGGACTGTTTAACGACACGGGTGGCGCATCCCGG
AAGAACAGCGCGGGTTGGGGGACACCCGCACCGCTAGGCGAATGGTACGG
CGTTACCATGGATGGAGTAGGCCGATTTCTAAGCCTGGCCCTTGGGGAAA
ACAACCTGGACGGTGCGTGCCACGAATAGGGCGTTCTTGCTTGACTTGTT
TCGAGAAACAAAAGTGCGATACGTCCCTTCATTGTGGGGCCAGAATTTCC
GCTTCGCTCCTGGTTCGTTTCTGGTTGCCTCCTCTCTCGACGTGATCGGT
CGCACGCACACACCCCACACCTTAGCGTTTTGTTCGGCTAGCTCCGGAGC
TTCCTCTGTCTGTACAGGGACTCCCGCAGCACAAATGTTTCTGCTGGCGG
CGCGGCGATGCTACCTCCGCCATCTTGTAGGCAAGCTTGATGAACGAAAT
ATTTCTTACGGGTGCTTGCAGTGTTCTGTCAATGCGGGACAGAGAGGTGG
GGGTGGTCGCTGTTACACTCGTAGATTCTCGCAGCATCGCCAACATAGCA
TAGTGAATGTTCCGCGCACGATACTGCCATCAATACGGCGAGGTATCCAG
GTGATGTCGAGCCGACGACAGATGCCGTTTGCTTTGTTATTCATCCCCGA
GATATGTTTTGTGTTTGCCGGACGTCGCCCTTGCTGCAGGTCCGATTCCG
TCTGCACCGGGCAACCTGACGCCCCTGGAATATCTGACTCTCTACAAGAA
CCAACTCACTGGTGAGCTGCTTAAAACGCTGTTTTTGTTTGTGCGACTTG
TCCAAGCCTGATCCCGCGATGTTTTTTTTTGTTTGCCGTGTGGCGTGTGC
GTGTCTCCTTAGATGTCCAACACCAGCTGGTCCGCCAGTGTAGACCGCGG
TAGATAATTGCTCGCGTTTTCTTGTCGGGGTATGGTGGGACCTGTCAAAC
CAAAGGCACAACGCTAGGTGGATGGATCACACAAGGTGTTGGATTTGGGA
CCCGACAACCCTTTCTTTCCCTGGGAAAAGACAACACCGACCCACTGTCA
CCGACGCGATTGTTTGTGGCGTCAAACGTCAACCTGGTGTATCGTCTGAG
GTGTATGATGTGCAATCTTCGTCGATAGATACGAGCACCGTAAGAGGCGT
TTGTTTTCGGCAGACCTGCTCACGTTCCTCCTGCGGGATATCGGGGCGAG
GAACATCACATCAGTTTGATATTTGCAAAGATTCTGATGCCTCTTGATGT
ATTGCTTGATCACATCCCATACGATGTAGATTGGACGAGTTGCTTCGGAG
GGCCGGCCGACTTCGTGGGACCGGCTTCATTCTCGTTCCCATCGGTGTTT
GCATGTGTGGCAATTTTGGTGCACTCTGTGTTGATGGTGTATGTAGGCGG
ACGAGTGGTTAAGATTTTGTCGTGCCTTCGTGTCCGTGTTCACCGCATTG
GGTGTGCTTGCTGCTGAACGCCTTTGTTCTGACAGGTCCGATTCCTCCGG
CGTTGGGTAGGCTGGCGGCTATGCAGATGCTGTGCCTCTCAGCCAACCAA
TTCAGTGGTGAGAGATTCAGGTAAGGGTTAGGCCCTAACCCCCTTACAAA
CGTCGGGCGAACTCCAGATCAACGATTTATTGGACCTGCCGTCGTGTTGA
GCGGCAGGAGTAGGTGTGAGCCGATTGGAATGCGCATGGTGCCTGGGGGT
ACTTGAAGCCATGGTTTTATGGTAGGGTTGGCTAAGGTTGATGTAGTTGT
GGTTACCTTCGCTTCGTTTTCGCGAATTTCGTCTGCGTCCAGTGTGGGTC
AGTGGAGCTACCTTCGCATGTAGGTTTTCTCTCGATCGAGCTGCGTCTAT
ACGACCATCGCAGAGATACGACCATCGCAGAGATTCGAGCTTGCCATGGT
GACATTCGGGTAGCAGGCTGAGTGTTGCTGATGGGTCCGGCTATGTCGTC
GATGTCCAGTCCCTTTGTTTGACCCGCCGGCGGGCGTCCCGGTTCCTGCA
GGTCACATCCCTTCGGCATTGGGTGGCTTGAAGTCTCTGGTCGAACTGAA
TCTTGACACCAACACGCTCACAGGTTTCTACATATGTGATCCAGCAGCGG
CCCTGTTCGTAATTGTATCCTGCGGCCAGTGAATGTCCCGTGATTGCGGC
ATTCTCTCTCTCTCTCTCTCGATATCATGTCCCACACCTACAACTACATC
ATCTCATGTCCAGAAGGTGATGATGTCGGATGTATCCCCCGCTTGTTCTT
GTCGAGGTGAACCAACCAGATCCCCCCCAACAACAGCAGATCAATTGTTG
ACCTTTCAGTAAGCTTTTTTTGCCCGGCGGAAGACAGCTCCGATTCACCC
TTACCGTTGCGATTGTTGGTGGCATCAAATACCAACCTGGTGCATCGTAC
GAGGTGTATGATGTGCAATCTTCGTCGATAGATACGAGCACCGTAAGAGG
CGTTTGTTTTCGGCAGACCTGCTCACGTTCCTCCTGCGGGATATCGGGGC
GAGGAACATCACATCAGTTTGATGTTTGCAAAGATTCTGATGCCTCTTGA
TGTATTTCTTGATCGGATCCATACGATGTACTGGTATAGATTACACGACT
TGCTTTGGAGGGCCGGCCGACTTCGTGGGACCGGCTTCATTCTCGTTCCC
ATCGGTGTTTGCATGTGTGGCAATTTTGGTGCACTCTGTGTTGATGGTGT
TGGCGGACGAGAGCGTAAGACTTTTGGGTGTTTTTGCGTCCGTGTCCAAA
GGCATGGTCTAGGGTGTGCTTGCTGCTGAACGCGCTTGTTCTGACACTCC
CGATTCCTCTGGAGTTGGGTAGGCACTGAGCTGTGTCTGCGCCGATCATC
GGTGACATCCGTTGTTGCCGTGGAGGGTTGTTGGCTCACTCGTGTGTGCT
GTCAGATTGCAGCGGGGTGCTGGCGGGGTATATACCCTCTGGTCGATTTC
CAGTCCGACTGACTGTGTTACCCGCCGTGCGGCCTCCGGCATTCATCATT
CGCGCGAATTGCGCCCGCTGCAACGTTCGCTCTTCCTTCGATTGGATTCT
CAGGGAGCAAGGCGGACGTTCAGCGGATGCTCCTCAACTGCAGCGAGGTG
TACTTTTGATCGCATTGCAGGAGGTCGCGGTGCTGCCGGGATTCATGTTG
TGCTCCAAGTATGCTGCATAAATCAAGCACGGGATCCGTTTTCTCATATT
TCCGTCTTTTCGTTGGCCCGCGCGCTGTGCGTGCACCGGTTCATGCAGTT
GGTGGTGGACGGCTGAATCCACAAGGTTTGGCTGTGCGTCGATTGGCACA
CAAGAGTGGAGGTTTCTGCGTTGTAGCGGAACATTGCAGAATGTCGCCTA
CATCGTTGGTAGGTCGTAAGATTCGCACTTCCTTTTATTGCCTGTGATGG
AGAACGATAAAATAAGCCCTTTGTTTCGAGAAGGGGGGCCAGAAGAAGGG
AAAAATAAGTTTTGTTTTTTGACCCGGAAAGAACTCACCGTTTCGGATTG
GTTATACCATCGTTGGGGC
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Coding sequence (CDS) from alignment at C-linearis_contig103:195418..200436+

>mRNA_C-linearis_contig103.829.1 ID=mRNA_C-linearis_contig103.829.1|Name=mRNA_C-linearis_contig103.829.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1350bp|location=Sequence derived from alignment at C-linearis_contig103:195418..200436+ (Chordaria linearis ClinC8C monoicous)
ATGTACCCTGTTGTGGCCGGCGTCGCTGTGAAGGCGATGCTTGAGGCCAA
GACGATGAGGGGTCTGTTCCAGTTGGCCGAAGAGGTACGTGTGGACGTCG
ACACCTGCACAAGCAAAGATGCGGTAGTCCAGGCTCTGCTGGCTTCCGGC
AAAAGCCTCGTGCCTGGCCCAGCGGTGCAAGGTAGGGCGCTACCTGGACC
ACAGGCTGCGCCGGCACTAGTTCATGACGCGACGACGGACCGTGCCGCGC
TGGTGGGACTGTTTAACGACACGGGTGGCGCATCCCGGAAGAACAGCGCG
GGTTGGGGGACACCCGCACCGCTAGGCGAATGGTACGGCGTTACCATGGA
TGGAGTAGGCCGATTTCTAAGCCTGGCCCTTGGGGAAAACAACCTGGACG
ATGTACCCTGTTGTGGCCGGCGTCGCTGTGAAGGCGATGCTTGAGGCCAA
GACGATGAGGGGTCTGTTCCAGTTGGCCGAAGAGGTACGTGTGGACGTCG
ACACCTGCACAAGCAAAGATGCGGTAGTCCAGGCTCTGCTGGCTTCCGGC
AAAAGCCTCGTGCCTGGCCCAGCGGTGCAAGGTAGGGCGCTACCTGGACC
ACAGGCTGCGCCGGCACTAGTTCATGACGCGACGACGGACCGTGCCGCGC
TGGTGGGACTGTTTAACGACACGGGTGGCGCATCCCGGAAGAACAGCGCG
GGTTGGGGGACACCCGCACCGCTAGGCGAATGGTACGGCGTTACCATGGA
TGGAGTAGGCCGATTTCTAAGCCTGGCCCTTGGGGAAAACAACCTGGACG
GTCCGATTCCGTCTGCACCGGGCAACCTGACGCCCCTGGAATATCTGACT
CTCTACAAGAACCAACTCACTGGTCCGATTCCGTCTGCACCGGGCAACCT
GACGCCCCTGGAATATCTGACTCTCTACAAGAACCAACTCACTGGTCCGA
TTCCTCCGGCGTTGGGTAGGCTGGCGGCTATGCAGATGCTGTGCCTCTCA
GCCAACCAATTCAGTGGTGAGAGATTCAGGTCCGATTCCTCCGGCGTTGG
GTAGGCTGGCGGCTATGCAGATGCTGTGCCTCTCAGCCAACCAATTCAGT
GGTGAGAGATTCAGGGAGCAAGGCGGACGTTCAGCGGATGCTCCTCAACT
GCAGCGAGGTGTACTTTTGATCGCATTGCAGGAGGTCGCGGTGCTGCCGG
GATTCATGTTGTGCTCCAAGTATGCTGCATAAGGAGCAAGGCGGACGTTC
AGCGGATGCTCCTCAACTGCAGCGAGGTGTACTTTTGATCGCATTGCAGG
AGGTCGCGGTGCTGCCGGGATTCATGTTGTGCTCCAAGTATGCTGCATAA
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