prot_C-linearis_contig102.797.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig102.797.1
Unique Nameprot_C-linearis_contig102.797.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length301
Homology
BLAST of mRNA_C-linearis_contig102.797.1 vs. uniprot
Match: D7FYM0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYM0_ECTSI)

HSP 1 Score: 277 bits (709), Expect = 4.100e-90
Identity = 150/183 (81.97%), Postives = 164/183 (89.62%), Query Frame = 0
Query:   74 RPASPQMKAPHISTLYDKQEVMIRHFGVTQKQALRTQALLRLGVTEQDVRIAERLMGSRGDGADNTHSKEEWLLGVTYAQMSFHKALQVLGISESVVEEERSRRLGELGSGW--WGTSEGHAGEE---TCGGFFAKKRRSSSEDLGTTLPGEVAFAPTHTRVLQLEEVCHTQMNRIQELESQV 251
            RP SPQMK+PHISTLY+KQ+VM++HFGVTQKQALRTQALLRLGVT++DVRIAERLMGSR +GADNT SKEEWLLGVTYAQMSFHKALQVLGISE+VVEEERSRRLGELGSG    G SE  AG+E   TCG FF KKRRSS E+LGTTLPGEVAFA  ++RVLQLEEVCHTQM RIQELESQ+
Sbjct:   58 RPFSPQMKSPHISTLYEKQDVMVKHFGVTQKQALRTQALLRLGVTDEDVRIAERLMGSRSEGADNTPSKEEWLLGVTYAQMSFHKALQVLGISEAVVEEERSRRLGELGSGGRGGGASECGAGQEAEDTCGRFFIKKRRSSIEELGTTLPGEVAFA--NSRVLQLEEVCHTQMTRIQELESQL 238          
BLAST of mRNA_C-linearis_contig102.797.1 vs. uniprot
Match: D7FYL6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYL6_ECTSI)

HSP 1 Score: 96.3 bits (238), Expect = 1.220e-20
Identity = 64/166 (38.55%), Postives = 93/166 (56.02%), Query Frame = 0
Query:   95 MIRHFGVTQKQALRTQALLRLGVTEQDVRIAERLMGSRGDGADNTHSKEEWLLGVTYAQMSFHKALQVLGISESVVEEERSRRLGELGSGWWGT-------SEGHAGEETCGGFFAKKRR--SSSEDLGTTLPGEVAFAPTHTRVLQLEEVCHTQMNRIQELESQV 251
            M +  G T +Q LR QALL+LGVTE+DVR+A  L+  R    +N  +K EWLL ++  QMS  KAL+ LG+S+ ++EE+R R LG+LG   WG        +E  +    CG  F K++    +++  G   P           V +LE+ C +Q  RIQ+LE +V
Sbjct:    1 MGKFIGATPQQVLRVQALLKLGVTEEDVRLAAELLRPR---TNNEGTKAEWLLSLSMEQMSRLKALEELGVSQDMLEEDRGRILGDLGIPRWGNPGDSMVDAERDSSTSACGPVFRKRQHIEGTAKRWGLAQPTR----QKEVEVAKLEDECLSQHLRIQQLELEV 159          
BLAST of mRNA_C-linearis_contig102.797.1 vs. uniprot
Match: A0A836CJU9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJU9_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 1.540e-18
Identity = 56/123 (45.53%), Postives = 79/123 (64.23%), Query Frame = 0
Query:   75 PASPQMKAPHISTLYDKQEVMIRHFGVTQKQALRTQALLRLGVTEQDVRIAERLMG----------SRGDGADNTH-----SKEEWLLGVTYAQMSFHKALQVLGISESVVEEERSRRLGELG 182
            P    M  P +S   D++ +M + FGV+ +Q  RTQALLRLGVTE D+++AERL            +R +G  +       SKEE LLG+T +++SF KAL+VLG+  ++VEEER+RRLG+LG
Sbjct:   67 PGGGSMLTPGLSRGKDQETIMQKQFGVSMEQMKRTQALLRLGVTEDDLKVAERLFAELPGGEELRKARAEGVISPAIPRKLSKEERLLGLTKSEISFCKALEVLGVDMAIVEEERARRLGQLG 189          
BLAST of mRNA_C-linearis_contig102.797.1 vs. uniprot
Match: A0A6H5KHW8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHW8_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 2.660e-12
Identity = 47/116 (40.52%), Postives = 70/116 (60.34%), Query Frame = 0
Query:   75 PASPQMKAPHISTLYDKQEVMIRHFGVTQKQALRTQALLRLGVTEQDVRIAERLMGSRGDGADNTH-SKEEWLLGVTYAQMSFHKALQVLGISESVVEEERSRRLGELGSGWWGTS 189
            P+S      H+ST Y K+E+M RH+G+   Q  R +ALLR+GV E+D+ IA+RL+    + +++T  +KEE LLG T  Q    KAL +LG++E   +  R+  L  LG   +G S
Sbjct:  202 PSSKDQPEEHLSTKYTKEELMARHWGMNLMQMKRVKALLRMGVCEEDLEIADRLLKMGLNWSNDTPPTKEEQLLGYTSQQRQRVKALHILGLTEESFDRCRAVMLSSLGPSAFGYS 317          
BLAST of mRNA_C-linearis_contig102.797.1 vs. uniprot
Match: A0A836CFQ6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFQ6_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 2.740e-12
Identity = 52/122 (42.62%), Postives = 72/122 (59.02%), Query Frame = 0
Query:   77 SPQMKAPHISTLYDKQEVMIRHFGVTQKQALRTQALLRLGVTEQDVRIAERLMGSRGDGADNTHSKEEWLLGVTYAQMSFHKALQVLGISES--------------VVEEERSRRLGELGSG 184
            SP M  P +S   D++ VM ++FGV+ +Q  RTQALLRLGVTE+D+R+AERL      G +   SKEE LLG+T +++SF+KAL+ + +                  VE   + RLG LG G
Sbjct:  487 SPNMTTPGMSRDKDQETVMGKYFGVSVEQMKRTQALLRLGVTEEDLRVAERLFAVL-PGNEELVSKEERLLGLTRSEISFYKALEGVRVQRCGACADDAVNPGANVEVEVAIAERLGSLGIG 607          
BLAST of mRNA_C-linearis_contig102.797.1 vs. uniprot
Match: A0A6H5K919_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K919_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 2.880e-10
Identity = 44/121 (36.36%), Postives = 67/121 (55.37%), Query Frame = 0
Query:  142 KEEWLLGVTYAQMSFHKALQVLGISESVVEEERSRRLGELGSGWWGT-------SEGHAGEETCGGFFAKKRR--SSSEDLGTTLPGEVAFAPTHTRVLQLEEVCHTQMNRIQELESQVRN 253
            K EWLL ++  QMS  KAL+ LG+S++++EE+R R LG LG   WG        +E  +   TCG  F K++   ++++  G   P           V +LE+ C +Q  RIQ+LE +VR+
Sbjct:    2 KAEWLLSLSVEQMSRLKALEQLGVSQAMLEEDRGRILGNLGIPRWGNPGDSMVDTEQDSSTSTCGPIFRKRQHIEATAKRWGLAQPTR----QMEVEVAKLEDECLSQHLRIQQLELEVRS 118          
BLAST of mRNA_C-linearis_contig102.797.1 vs. uniprot
Match: D8LT43_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT43_ECTSI)

HSP 1 Score: 60.5 bits (145), Expect = 1.090e-7
Identity = 38/96 (39.58%), Postives = 57/96 (59.38%), Query Frame = 0
Query:   95 MIRHFGVTQKQALRTQALLRLGVTEQDVRIAERLMGSRGDGADNTH-SKEEWLLGVTYAQMSFHKALQVLGISESVVEEERSRRLGELGSGWWGTS 189
            M RH+G+   Q  R +ALLR+GV E+D+ IA+RL+    + +++T  +KEE LLG    Q    KAL +LG++E   +  R+  L  LG   +G S
Sbjct:    1 MARHWGMNLMQMKRVKALLRMGVCEEDLEIADRLLKMGLNWSNDTPPTKEEQLLGYNSQQRQRMKALHILGLTEESFDRCRAVMLSSLGPSAFGYS 96          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig102.797.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FYM0_ECTSI4.100e-9081.97Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FYL6_ECTSI1.220e-2038.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CJU9_9STRA1.540e-1845.53Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5KHW8_9PHAE2.660e-1240.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CFQ6_9STRA2.740e-1242.62Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5K919_9PHAE2.880e-1036.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LT43_ECTSI1.090e-739.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 230..257

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig102contigC-linearis_contig102:475403..477944 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig102.797.1mRNA_C-linearis_contig102.797.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig102 475326..478102 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig102.797.1 ID=prot_C-linearis_contig102.797.1|Name=mRNA_C-linearis_contig102.797.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=301bp
MLVKPEDVVVETATAVEEAPTASVEEPVTAIAGVVGAAVDEATTSPGEEE
GNSDEPPGESPTNDDPELDNEKQRPASPQMKAPHISTLYDKQEVMIRHFG
VTQKQALRTQALLRLGVTEQDVRIAERLMGSRGDGADNTHSKEEWLLGVT
YAQMSFHKALQVLGISESVVEEERSRRLGELGSGWWGTSEGHAGEETCGG
FFAKKRRSSSEDLGTTLPGEVAFAPTHTRVLQLEEVCHTQMNRIQELESQ
VRNQRDSGGQVDLSQRCGDCCPVSCFELHQIRRVQAGSRRGGPRSKRVFV
*
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